BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg485310 Length=672 Score E Sequences producing significant alignments: (Bits) Value AT3G49540.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 1053 0.0 > AT3G49540.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; Has 9244 Blast hits to 5308 proteins in 962 species: Archae - 18; Bacteria - 2665; Metazoa - 1953; Fungi - 964; Plants - 333; Viruses - 74; Other Eukaryotes - 3237 (source: NCBI BLink). | chr3:18365678-18366565 FORWARD LENGTH=785 Length=785 Score = 1053 bits (570), Expect = 0.0 Identities = 642/675 (95%), Gaps = 11/675 (2%) Strand=Plus/Plus Query 1 ATAATAATGGGTGGCTGTGCGAGTAGACCCAAGGAATCAGACATG-AACAACGAAGAAGG 59 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct 117 ATAATAATGGGTGGCTGTGCGAGTAGACCCAAGGAATCAGACATGCAA-AACGAAGAAGG 175 Query 60 CTCTGTTCCTAACAAGCCTGTGTCTGAAACCGTAGTAGCCAAGGAGAACAACACAGAAAG 119 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct 176 CTCTGTTCCTAACAAGCCTGTCTCTGAAAACGTAGTAGCCAAGGAGAACAACACAGAAAG 235 Query 120 CGGTGAGAAACAGAACCAGACAGTGGCTGAGACCACTGAAACAACTTCTGTCGAAGCTAA 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 236 CGGTGAGAAACAGAACCAGACAGTGGCTGAGACCACTGAAACAACTTCTGTCGAAGCTAA 295 Query 180 GGAGACATCTCCGGTCGAGCCGACCAAGGAAACCACTCCTGCTGTTCAACCAGAGGTTGC 239 |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 296 GGAGACATTTCCGGTCGAGCCGACCAAGGAAACAACTCCTGCTGTTCAACCAGAGGTTGC 355 Query 240 AGCCGTCGAAGAGTCTTCTTCTGCTGCTGCTGGTGAGGCTGCAGAAGCCGCACCTGAGAA 299 |||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| Sbjct 356 AGCCGTCGAAGAGTCTTCTTCTGCTGATGCTGGTGAGGCTGCAGTAGTTGCACCTGAGAA 415 Query 300 AGTGGAGAAGGCTGCAACAGAAAACGTTGAAGCAAAGGTGGATGCGGTTGCAGTAGCTGT 359 ||||||||| |||||||||||||||| ||||||||||||||| |||||||| ||||||| Sbjct 416 AGTGGAGAACGCTGCAACAGAAAACGCTGAAGCAAAGGTGGAGGCGGTTGCCGTAGCTGC 475 Query 360 ACCTGAAAAGGTTGAGGTTGCGGTGGAAGCGGAGAAAAAGGCTGAAACTGAACCAGTAAA 419 ||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 476 ACCCGAAAAGGTTGAGGTTGCAGTGGAAGCGGAGAAAAAGGCTGAAGCTGAACCAGTAAA 535 Query 420 GGCTGAGGCTGAACCAGTAAAGACC-GAGGCTGGACCAGTAAAGGAGGAGAGTAAAAAAG 478 ||||||||||||||||||||| | | ||||||| |||||||||||||||||||||| ||| Sbjct 536 GGCTGAGGCTGAACCAGTAAA-AGCTGAGGCTGAACCAGTAAAGGAGGAGAGTAAACAAG 594 Query 479 AAGAGAAAGAAGCTGTTGTCACCGTTTGATGATTAATTAAATTTGTGAAAGTATTTTGAA 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 595 AAGAGAAAGAAGCTGTTGTCACCGTTTGATGATTAATTAAATTTGTGAAAGTATTTTGAA 654 Query 539 TGTTGTTGTATGTCACCTTGATTTGATTTGATTTGCTACTACCAGATTGGTTTGGCTTT- 597 |||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct 655 TGTTGTTGTATGTCACCTTG----G-TTTGATTTGCTACTACCAGATTGGTTTGGCTTTT 709 Query 598 GTTTGTTCTTTGTATCTCAAAATGATTCTTCTTTGATTCAATTAAATATAAATCAGTTTT 657 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 710 GTT-GTTCTTTGTATCTCAAAATGATTCTTCTTTGATTCAATTAAATATAAATCAGTTTT 768 Query 658 GCTTCTTGAAACTTT 672 || || ||||| ||| Sbjct 769 GCATCGTGAAAATTT 783 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 32501493109 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5