BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg485372
Length=1463
Score E
Sequences producing significant alignments: (Bits) Value
AT3G50140.1 | Symbols: | Plant protein of unknown function (DU... 1098 0.0
AT3G50190.1 | Symbols: | Plant protein of unknown function (DU... 560 1e-158
AT3G50120.1 | Symbols: | Plant protein of unknown function (DU... 414 1e-114
AT3G50180.1 | Symbols: | Plant protein of unknown function (DU... 392 5e-108
AT3G50150.1 | Symbols: | Plant protein of unknown function (DU... 359 5e-98
AT3G50160.1 | Symbols: | Plant protein of unknown function (DU... 254 2e-66
> AT3G50140.1 | Symbols: | Plant protein of unknown function (DUF247)
| chr3:18592401-18594564 REVERSE LENGTH=1693
Length=1693
Score = 1098 bits (594), Expect = 0.0
Identities = 736/800 (92%), Gaps = 28/800 (4%)
Strand=Plus/Plus
Query 269 AGAGACGACGCCACAACTAGCTGGGACAAGCTTTGTATCTACAGAGTTCCACTCTCCCTT 328
||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct 309 AGAGACGCCGCCACAACTAGCTGGGACAAGATCTGTATCTACAGAGTTCCACTCTCCCTT 368
Query 329 CAGAAAAA-CGACAATAACTCCTACTTCCCTCAAACCGTCTCTCTTGGTCCG-------- 379
| ||||| |||||| || || |||||||||||| | ||||| |||||||||
Sbjct 369 -AAAAAAAGCGACAAGAATTCTTACTTCCCTCAAGCAGTCTCGCTTGGTCCGTACCACCA 427
Query 380 T----------A---CC-A-CCATGGACTATCACAAATGGCGTGCGGTCAATATGGTCAT 424
| | || | ||||||||||||||||||||||||||||||||||||||||
Sbjct 428 TGGGGACGAACATCTCCGACCCATGGACTATCACAAATGGCGTGCGGTCAATATGGTCAT 487
Query 425 GAAACGTACCAAGCAAGGCATCGGATTGTATATTGACGCCATGAAAGAGCTCGAAGAGAG 484
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 488 GAAACGTACCAAGCAAGGCATCGAAATGTATATTGACGCCATGAAAGAGCTCGAAGAGAG 547
Query 485 GGCTCGTTCTTGCTACAAAGGTCGTATTGGTTTGAGCAGTAACAAGTTCACCCAAATGCT 544
||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct 548 GGCTCGTGCTTGCTACGAAGGTCCTATTGGTTTGAGCAGTAACAAGTTCACCCAAATGCT 607
Query 545 AGTTCTTGATGGTTGTTTTGTTCTCGATCTCTTCAGAGGAGCCTATGAAGGATTCTTGAA 604
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 608 AGTTCTTGATGGCTGTTTTGTTCTCGATCTCTTCAGAGGAGCCTATGAAGGATTCTCGAA 667
Query 605 ACTTGGATACAATCGAAACGATCCCGTTTTTGCCATGCGAGGATCGATGCATTCGATTCG 664
|||||| ||| | ||||||||||||||||| || ||||||||||| ||||||||||||||
Sbjct 668 ACTTGGGTACGACCGAAACGATCCCGTTTTCGCGATGCGAGGATCTATGCATTCGATTCG 727
Query 665 ACGTGACATGCTAATGCTGGAAAATCAACTTCCTTTGTTTGTCTTAAACCGGTTATTAGA 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 728 ACGTGACATGCTAATGCTGGAAAATCAACTTCCTTTGTTTGTCTTAAACCGGTTATTAGA 787
Query 725 GCTACAACTCGGTACACAATACCAAACCGGTTTAGTGGCACAATTAGCGGTTCGGTTCTT 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 788 GCTACAACTCGGTACACAATACCAAACCGGTTTAGTGGCACAATTAGCGGTTCGGTTCTT 847
Query 785 CAATCCGTTGATGCCAACCTATATGCCATCAACCAAAATTGACAACTCGCAAGAAAACAA 844
|||||||||||||||||| |||||| ||||||||||||| || ||||| |||||||||||
Sbjct 848 CAATCCGTTGATGCCAACTTATATGTCATCAACCAAAATCGAGAACTCCCAAGAAAACAA 907
Query 845 ---TAAATTCTTTAACCCAATTGCTGACAAGGAGAAGGAAGAGTTGCACTGTCTGGATGT 901
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 908 CAATAAATTCTTTAACCCAATTGCTGACAAGGAGAAGGAAGAGTTGCATTGTCTGGATGT 967
Query 902 TTTCCGTCGAAGTCTGCTCCAGCCTAGTCTGAAACCGGAGCCAAGGTTATCGCGAAGTAG 961
|||||||||||||||||||||||||||||| |||||||| || ||||||||||| |||||
Sbjct 968 TTTCCGTCGAAGTCTGCTCCAGCCTAGTCTAAAACCGGACCCGAGGTTATCGCGGAGTAG 1027
Query 962 ATGGTCTAGGAAACCGCTTGTGGCGGACAAGCGCCAACAACAACTACTACATTGCGTGAC 1021
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1028 ATGGTCCAGGAAACCGCTGGTGGCGGACAAGCGCCAACAACAACTACTACATTGCGTGAC 1087
Query 1022 AGAACTAAGAGAGGCCGGTA 1041
|||||||||||| |||||||
Sbjct 1088 AGAACTAAGAGAAGCCGGTA 1107
Score = 717 bits (388), Expect = 0.0
Identities = 412/424 (97%), Gaps = 0/424 (0%)
Strand=Plus/Plus
Query 1038 GGTACCAAGTCTCTTTTCTCAAATCTTATAGCTTACGAGCAGTGCCATATCGATTCAACC 1097
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1197 GGTACCAAGTCTCTTTTCTCAAATCTTATAGCTTACGAGCAGTGCCATATCGATTCAACG 1256
Query 1098 AACGATATAACATCCTACATAATTTTCATGGACAATCTAATAGATTCTGCTGACGATATT 1157
||||| |||||||||||||| || ||||||||||||||||||||||||||||| ||||||
Sbjct 1257 AACGACATAACATCCTACATTATCTTCATGGACAATCTAATAGATTCTGCTGAAGATATT 1316
Query 1158 AGGTATTTGCACTACTATGATATCATCGAGCACTGGTTAGGAAATGATTCGGAAGTTGCT 1217
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1317 AGGTATTTGCATTACTATGATATCATCGAGCACTGGTTAGGAAATGATTCAGAAGTTGCT 1376
Query 1218 GATGTCTTCAACCGGCTATGTCAAGAAGTGGCTTTCGACCTCGAAAATACTTATTTATCT 1277
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1377 GATGTCTTCAACCGGCTATGTCAAGAAGTGGCTTTCGACCTCGAAAATACTTACTTATCT 1436
Query 1278 GAATTGTCAAATAAGGTGGACCGTTTTTATAACCGAAAGTGGAATGTTCTGAAGGCAACC 1337
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1437 GAATTGTCAAATAAGGTGGACCGTTATTATAACCGAAAGTGGAATGTTCTGAAGGCAACC 1496
Query 1338 TTGAAACACAAGTACTTCAGTAATCCTTGGGCATATTTCTCTTTCTTTGCAGCAGTTATT 1397
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 1497 TTGAAACACAAGTACTTTAGTAATCCTTGGGCATATTTCTCTTTCTTTGCGGCAGTTATT 1556
Query 1398 CTGCTACTTCTCACATTATTTCAGAGtttttttACTAGTTATCCTTATTTTAAGCCACCT 1457
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1557 CTGCTACTTCTCACATTATTTCAGAGCTTTTTTACTAGTTATCCTTATTTTAAGCCACCT 1616
Query 1458 TCTT 1461
||||
Sbjct 1617 TCTT 1620
Score = 300 bits (162), Expect = 3e-80
Identities = 238/273 (87%), Gaps = 11/273 (4%)
Strand=Plus/Plus
Query 1 AAATGGCCATTCTTAGTAAACGACGaccaccacctcca---ccaccaccaccgcggc--- 54
||||||| | || ||||||||||||||||||||||||| || || || || || |
Sbjct 1 AAATGGCAACTCCTAGTAAACGACGACCACCACCTCCACCGCCGCCGCCTCCTCGTCTAT 60
Query 55 --ct-cttccaccacttccgccgccaccaccacccccgccgccccagctaccaTTTGGAC 111
| || ||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct 61 TGGTGCTGCCACCACTTCCACCGCCACCACCACCGCCGCCGCCCCAGCTACCATTTGGAC 120
Query 112 CGAATCTTCCTTTACCTCATATTATCATAAGAAGGAAAGGAAGAAGAAACTATCAACTAC 171
|||| |||||||| |||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct 121 CGAAGCTTCCTTTCCCTCATATTATCATAAGAAGAAAAGCAAGAAGAAACTATCAACTAC 180
Query 172 GACAGATGTTGACCTTGTACTTCCTAACATTCATAATGCGCaaaaaaaaT-CAAACCCAA 230
||| ||||||||||| ||||||||| || ||||| |||||| ||||| | ||||||| |
Sbjct 181 GACCGATGTTGACCTGGTACTTCCTCACCTTCATGATGCGC-CAAAAACTCCAAACCCGA 239
Query 231 AACCAACAACCCGAAGAGACACGGGAAGAATGG 263
|||||||||||||||||||||||||||||||||
Sbjct 240 AACCAACAACCCGAAGAGACACGGGAAGAATGG 272
> AT3G50190.1 | Symbols: | Plant protein of unknown function (DUF247)
| chr3:18609114-18611169 REVERSE LENGTH=1532
Length=1532
Score = 560 bits (303), Expect = 1e-158
Identities = 411/458 (90%), Gaps = 27/458 (6%)
Strand=Plus/Plus
Query 269 AGAGACGACGCCACAACTAGCTGGGACAAGCTTTGTATCTACAGAGTTCCACTCTCCCTT 328
||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct 256 AGAGACGCCGCCACAACTAGCTGGGACAAGCTCTGTATCTACAGAGTTCCACTCTCCTTT 315
Query 329 CAGAAAAA-CGACAATAACTCCTACTTCCCTCAAACCGTCTCTCTTGGTCCG-------- 379
|| ||||| |||||| || |||||||||||||| || |||||||||||||||
Sbjct 316 CA-AAAAAGCGACAAGAATTCCTACTTCCCTCACACTGTCTCTCTTGGTCCGTACCACCA 374
Query 380 T----------A---CC-A-CCATGGACTATCACAAATGGCGTGCGGTCAATATGGTCAT 424
| | || | ||||||||||||||||||||||||||||||||||||||||
Sbjct 375 TGGGGACGAACATCTCCGACCCATGGACTATCACAAATGGCGTGCGGTCAATATGGTCAT 434
Query 425 GAAACGTACCAAGCAAGGCATCGGATTGTATATTGACGCCATGAAAGAGCTCGAAGAGAG 484
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 435 GAAACGTACCAAGCAAGGCATCGAAATGTATATTGACGCCATGAAAGAGCTCGAAGAGAG 494
Query 485 GGCTCGTTCTTGCTACAAAGGTCGTATTGGTTTGAGCAGTAACAAGTTCACCCAAATGCT 544
||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct 495 GGCTCGTGCTTGCTACGAAGGTCCTATTGGTTTGAGCAGTAACAAGTTCACCCAAATGCT 554
Query 545 AGTTCTTGATGGTTGTTTTGTTCTCGATCTCTTCAGAGGAGCCTATGAAGGATTCTTGAA 604
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 555 AGTTCTTGATGGCTGTTTTGTTCTCGATCTCTTCAGAGGAGCCTATGAAGGATTCTCGAA 614
Query 605 ACTTGGATACAATCGAAACGATCCC-GTTTTTGCCATGCGAGGATCGATGCATTCGATTC 663
|||||| || |||||||||| ||| ||||| || ||||||||||| |||||||||||||
Sbjct 615 ACTTGGCTATGATCGAAACGA-CCCTGTTTTCGCGATGCGAGGATCTATGCATTCGATTC 673
Query 664 GACGTGACATGCTAATGCTGGAAAATCAACTTCCTTTG 701
||||||||||||||||||||||||||||||||||||||
Sbjct 674 GACGTGACATGCTAATGCTGGAAAATCAACTTCCTTTG 711
Score = 342 bits (185), Expect = 5e-93
Identities = 236/259 (91%), Gaps = 10/259 (4%)
Strand=Plus/Plus
Query 788 TCCGTTGATGCCAACCTATATGCCATCAACCAAAATTGACAACTCGCAAG--AA-AACAA 844
||| ||||||||||| |||||||||||||||||||| || || ||||||| || |||||
Sbjct 705 TCCTTTGATGCCAACTTATATGCCATCAACCAAAATCGAGAATTCGCAAGAAAACAACAA 764
Query 845 TAAATTCTTTAACCCAATTGCTGACAAGGAGAAGGAAGAGTTGCACTGTCTGGATGTTTT 904
|||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 765 TAAATTCTTTCACCCAATTGCTGACAAGGACAAGGAAGAGTTGCACTGTCTGGATGTTTT 824
Query 905 CCGTCGAAGTCTGCTCCAGCCTAGTCTGAAACCGGAGCCAAGGTTATCGCGAAGTAGATG 964
|||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 825 CCGTCGAAGTGTGCTCCAGCCTAGTCTGAAACCGGAGCCAAGGTTATCGCG---TAGATG 881
Query 965 GTC-TAGGAAACCGCTT-GTGGCGGACAAGCGCCAACAACAACTACTACATTGCGTGACA 1022
||| | ||||||| | | ||||||||||||||||||||| || | |||||||||||||||
Sbjct 882 GTCCT-GGAAACC-CGTCGTGGCGGACAAGCGCCAACAAAAATTGCTACATTGCGTGACA 939
Query 1023 GAACTAAGAGAGGCCGGTA 1041
||||||||||| |||||||
Sbjct 940 GAACTAAGAGAAGCCGGTA 958
> AT3G50120.1 | Symbols: | Plant protein of unknown function (DUF247)
| chr3:18585000-18587312 REVERSE LENGTH=1819
Length=1819
Score = 414 bits (224), Expect = 1e-114
Identities = 541/686 (79%), Gaps = 53/686 (8%)
Strand=Plus/Plus
Query 387 ATGGACTATCACAAATGGCGTGCGGTCAATATG-GTCATGAAACGTACCAAGCAAGGCAT 445
|||||| ||||||||||||||| ||||||| | ||| |||||||||| || ||||||||
Sbjct 484 ATGGACCGTCACAAATGGCGTGCTGTCAATA-GAGTCTTGAAACGTACGAACCAAGGCAT 542
Query 446 CGGATTGTATATTGACGCCATGAAAGAGCTCGAAGAGAGGGCTCGTTCTTGCTACAAAGG 505
| ||||||| |||||||||| |||||| || || | |||||| |||| ||| ||||
Sbjct 543 TAAAATGTATATCGACGCCATGAGAGAGCTAGAGGAAAAGGCTCGAGCTTGTTACGAAGG 602
Query 506 T-CGTATTGGTTTGAGCAGTAAC-AAGTTCACCCAAATGCTAGTTCTTGATGGTTGTTTT 563
| | | | ||||||| |||||| || || | | ||||||||||||||||||||||||||
Sbjct 603 TCCCT-TAAGTTTGAGTAGTAACGAA-TTTATCGAAATGCTAGTTCTTGATGGTTGTTTT 660
Query 564 GTTCTCGATCTCTTCAGAGGAGCC-TATGAAGGATTCT-TGAAACTTGGATA--CAATCG 619
|| || || ||||| ||||||||| | |||||||||| |||| || ||||| || ||
Sbjct 661 GTGCTTGAGCTCTTTAGAGGAGCCGT-TGAAGGATTCACTGAA-CTCGGATATGCA--CG 716
Query 620 AAACGATCCCGTTTTTGCCATGCGAGGATCGATGCATTCGATTCGACGTGACATGCTAAT 679
|||||||| ||||| || ||| ||||||||||||||||||||| |||||||||| ||||
Sbjct 717 TAACGATCCAGTTTTCGCGATGAGAGGATCGATGCATTCGATTCAACGTGACATGGTAAT 776
Query 680 GCTGGAAAATCAACTTCCTTTGTTTGT-CTTAAACCGGTTATTAGAGCTACAACTCGGTA 738
||| ||||||||||||||||| ||||| || |||||||||||||||| |||| || ||||
Sbjct 777 GCTTGAAAATCAACTTCCTTTATTTGTTCT-AAACCGGTTATTAGAGTTACAGCTTGGTA 835
Query 739 CACA-ATACCAAACCGGTTTAGTGGCACAATTAGCGGTTCGGTTCTTCAATCCGTTGATG 797
||| | ||||||||||||| |||||||||||||| |||||||||| |||| | |||
Sbjct 836 CACGGA-ACCAAACCGGTTTGGTGGCACAATTAGCAATTCGGTTCTTTGATCCACTAATG 894
Query 798 CCAACCTAT-ATGCCAT---C-AA--C---C-A---AAAT-T-GACAACTCGCAAGAAA- 840
||||| | | ||| | | || | | | ||| | || ||||| | | ||
Sbjct 895 CCAACGGACGA-GCCGTTGACTAAATCTGGCCAGTCAAAACTCGAGAACTCACTGGCAAG 953
Query 841 ACAATAAATTCTTTAACCCAATT-GCTGACAAGGAGAAGGAAGAGTTGCACTGTCTGGAT 899
| | ||||| |||| ||||| || ||||| | || | | || | ||| ||||| |||
Sbjct 954 AGA-TAAATCCTTTGACCCA-TTCGCTGATATGG-GT-G-AAC--T-GCATTGTCTAGAT 1005
Query 900 GTTTTCCGTCGAAGTCTGCTCCAGCCTAGTC-TGAAACCGGAGCCAAGGTTATCGCGAA- 957
||||||||||| ||| || | | | |||||| | ||||||||||| |||||| | |||
Sbjct 1006 GTTTTCCGTCGTAGTTTGTTACGGTCTAGTCCT-AAACCGGAGCCGAGGTTAACAAGAAA 1064
Query 958 GTAGATGGTCTAGGAAAC-CGCTTGTGGCGGACAAGCGCCAACAACAACT-ACTACATTG 1015
| ||||||||| | |||| ||| ||||||||||||||||| |||||| | | |||||||
Sbjct 1065 G-AGATGGTCTCG-AAACACGCGTGTGGCGGACAAGCGCCGGCAACAATTGA-TACATTG 1121
Query 1016 CGTGACAGAACTAAGAGAGGCCGGTA 1041
||||| ||||||| |||||| ||||
Sbjct 1122 TGTGACGGAACTAAAAGAGGCTGGTA 1147
> AT3G50180.1 | Symbols: | Plant protein of unknown function (DUF247)
| chr3:18604941-18607162 REVERSE LENGTH=1769
Length=1769
Score = 392 bits (212), Expect = 5e-108
Identities = 357/425 (84%), Gaps = 17/425 (4%)
Strand=Plus/Plus
Query 385 CCATGGACTATCACAAATGGCGTGCGGTCAATATGGTCA-TGAAACGTACCAAGCAAGGC 443
||||||| | || ||||||||||| ||||||||||| | | |||||||| || ||||||
Sbjct 641 CCATGGAGTGCCATAAATGGCGTGCCGTCAATATGGT-ATTAAAACGTACGAACCAAGGC 699
Query 444 ATCGGATTGTATATTGACGCCATGAAAGAGCTCGAAGAGAGGGCTCGTTCTTGCTACAAA 503
|| | | ||| | |||||||||||| |||||| || |||| ||||||| |||||||| ||
Sbjct 700 ATTGAAGTGTTTCTTGACGCCATGATAGAGCTGGAGGAGAAGGCTCGTGCTTGCTACGAA 759
Query 504 GG-TCGTATTGGTTTGAGCAGTAACAAGTTCACCCAAATGCTAGTTCTTGATGGTTGTTT 562
|| || |||| ||||||||||||| ||||||| ||||||| |||||||||| |||||
Sbjct 760 GGTTC-CATTGTTTTGAGCAGTAACGAGTTCACAGAAATGCTTCTTCTTGATGGCTGTTT 818
Query 563 TGTTCTCGATCT-CTTCAGAGGAGCCTATGAAGGATTCTTGAAACTTGGATACAATCGA- 620
| ||||||| || || || ||||| | ||||||||||||||||||| ||||| ||| |
Sbjct 819 TATTCTCGAGCTCCTCCA-AGGAGTCAATGAAGGATTCTTGAAACTCGGATATGATC-AT 876
Query 621 AACGATCCCGTTTTTGCCATGCGAGGATCGATGCATTCGATTCGACGTGACATGCTAATG 680
|||||||| ||||| || | |||||||||||||||||||||| |||||||||| |||||
Sbjct 877 AACGATCCAGTTTTCGCGGTTCGAGGATCGATGCATTCGATTCAACGTGACATGATAATG 936
Query 681 CTGGAAAATCAACTTCCTTTGTTTGT-CTTAAACCGGTTATTAGAGCTACAACTCGGTAC 739
||||||||||||||||||||||| || || || ||||||||||||| |||||| ||||||
Sbjct 937 CTGGAAAATCAACTTCCTTTGTTCGTACTCAA-CCGGTTATTAGAGTTACAACCCGGTAC 995
Query 740 ACA-ATACCAAACCGGTTTAGTGGCACAATTAGCGGTTCGGTTCTTCAATCCGT-TGATG 797
||| | ||||||| |||||||||| | | |||| |||||||||||| | ||| | | |||
Sbjct 996 ACAGA-ACCAAACTGGTTTAGTGG-A-A-TTAGTGGTTCGGTTCTTTATTCC-TCTAATG 1050
Query 798 CCAAC 802
|||||
Sbjct 1051 CCAAC 1055
> AT3G50150.1 | Symbols: | Plant protein of unknown function (DUF247)
| chr3:18595731-18597642 REVERSE LENGTH=1699
Length=1699
Score = 359 bits (194), Expect = 5e-98
Identities = 446/560 (80%), Gaps = 48/560 (9%)
Strand=Plus/Plus
Query 265 ACTTAGAGACGACGCCACAACTAGCTGGGACAAGCTTTGTATCTACAGAGTTCCACTCTC 324
|||||| ||||||| |||| ||||||||||||||| ||||||||||||||||| |||
Sbjct 325 ACTTAGTTACGACGCAACAAATAGCTGGGACAAGCTCTGTATCTACAGAGTTCCTTTCTA 384
Query 325 CCTTC-AGAAAAACGACAATAACTCCTACTTCCCTCAAACCGTCTCTCTTGGTCCGTACC 383
|||| || | |||||||| || || ||||| |||||||| |||||| ||||||||||||
Sbjct 385 TCTTCAAG-AGAACGACAAGAAGTCTTACTTACCTCAAACTGTCTCTATTGGTCCGTACC 443
Query 384 ACCAT------G---------GA--C-T--A---TCACAAATGGCGTGCGGTCAATATGG 420
||||| | || | | | |||||||||||| ||||||||||||
Sbjct 444 ACCATGGAAAGGTACACCTCAGACCCATGGAGCGTCACAAATGGCGAGCGGTCAATATGA 503
Query 421 TCATGAAACGTACCAAGCA-AGGCATCGGATTGTATATTGACGCCATGAAAGAGCTCGAA 479
||||| |||||||||||| | ||| | | ||||||||||||||||||||||||||||
Sbjct 504 TCATGGCACGTACCAAGCACA-ACATTGAAATGTATATTGACGCCATGAAAGAGCTCGAG 562
Query 480 GAG-AGGGCTCGTTCTTGCTACAAAGGTCGTATTGGTTTGA-GCA--GTAACAAGTTCAC 535
||| ||| ||||| |||||||| |||||| |||| ||| | | |||| |||||||
Sbjct 563 GAGGAGG-CTCGTGCTTGCTACCAAGGTCCCATTGACATGAAGAATAGTAATGAGTTCAC 621
Query 536 CCAAATGCTAGTTCTTGATGGTTGTTTTGTTCTCGATCTCTTCAGAGG-AGCCTATG-AA 593
||||||| ||||||||||||||||| |||||||| ||||||| ||| | | || ||
Sbjct 622 AGAAATGCTTGTTCTTGATGGTTGTTTCGTTCTCGAGCTCTTCA-AGGGAACA-ATTCAA 679
Query 594 GGATTCTTGAAACTTGGATA--CAATCGAAACGATCCCGTTTTT-GCCATGCGAGGATCG 650
|||||| |||| ||||||| || || ||||| |||| |||| || | |||||||| |
Sbjct 680 GGATTCCAGAAAATTGGATATGCA--CGTAACGA-CCCGGTTTTCGCTAAGCGAGGATTG 736
Query 651 ATGCATTCGATTCGACGTGACATGCTAATGCTGGAAAATCAACTTCCTTTGTTTGT-CTT 709
||||||||||||| |||||||||| ||||| ||||||| ||||||||| |||| || ||
Sbjct 737 ATGCATTCGATTCAACGTGACATGATAATGTTGGAAAACCAACTTCCTCTGTTCGTTCTC 796
Query 710 AAACCGGTTATTAGAGCTACAA-CTCGGTACACA-ATACCAAACCGGTTTAGTGGCACAA 767
| ||||||||||| ||||||| | |||||||| | ||||||| ||| |||||||| ||
Sbjct 797 GA-CCGGTTATTAGGGCTACAAAC-CGGTACACCGA-ACCAAACGGGTATAGTGGCAGAA 853
Query 768 TTAGCGGTTCGGTTCTTCAA 787
|||| ||||||||||||||
Sbjct 854 GTAGCTGTTCGGTTCTTCAA 873
Score = 302 bits (163), Expect = 8e-81
Identities = 343/428 (80%), Gaps = 20/428 (5%)
Strand=Plus/Plus
Query 1038 GGTACCAAGTCTCTTTTCTCAAATCTTATAGCTTACGAGCAGTGCCATAT-CGATTCAAC 1096
||||||||||||||||||||||||||||| |||| |||||||||||||| | || |||
Sbjct 1196 GGTACCAAGTCTCTTTTCTCAAATCTTATTGCTTTCGAGCAGTGCCATACACAAT-CAAG 1254
Query 1097 CAACGATATAACATCCTACATAATTTTCATGGACAATCTAATAGATTCTGCTGACGATAT 1156
|||| | ||||||||||||||||| |||||||| ||||||||| | ||| || | ||| |
Sbjct 1255 CAACAACATAACATCCTACATAATCTTCATGGATAATCTAATAAACTCTTCTCAAGATGT 1314
Query 1157 TAGGTATTTGCACTACTATGATATCATCGAGCACTGGTTAGGAAATGATTCGGAAGTTGC 1216
||| || |||||| || | | ||| || ||||| |||||||| | |||||| ||||||||
Sbjct 1315 TAGCTACTTGCACCACGACGGTATTATTGAGCATTGGTTAGGGAGTGATTCTGAAGTTGC 1374
Query 1217 TGATGTCTTCAACCGGCTATGTCAAGAAGTGG-CTTTCGACCTCGAAA-ATACTTATTTA 1274
||| | ||||||||| ||||| |||||||| |||| || | | ||| || ||| ||
Sbjct 1375 AGATTTGTTCAACCGGTTATGTAAAGAAGTGATCTTT-GATC-CAAAAGATGGGTATCTA 1432
Query 1275 TCTGAATTGTCAAAT-AAGGTGGACCGTTTTTATAACCGAAAGTGGAA-T-GTTCTGAAG 1331
||| || |||| | ||| | |||||| ||||| || |||||||| | ||| ||||
Sbjct 1433 TCTCAACTGTCTCGTGAAGTTA-ACCGTTATTATAGTCGTAAGTGGAACTCGTT--GAAG 1489
Query 1332 GCAAC-CTTGAA-ACACAAGTACTTCAGTAATCCTTGGGCATATTTCTCTTTCTTT-GCA 1388
|| || || || ||| |||||||||| ||| ||||||||||||||||| || || ||
Sbjct 1490 GCTACTCT--AAGACAAAAGTACTTCAATAACCCTTGGGCATATTTCTCCTT-TTCAGCT 1546
Query 1389 GCAGTTATTCTGCTACTTCTCACATTATTTCAGAGtttttttACTAGT-TATCCTTATTT 1447
||||||||||||||| |||||||||| ||||| || || ||| || || ||| ||||||
Sbjct 1547 GCAGTTATTCTGCTATTTCTCACATTCTTTCAAAGCTTCTTTGCT-GTCTATGCTTATTA 1605
Query 1448 TAAGCCAC 1455
||||||||
Sbjct 1606 TAAGCCAC 1613
> AT3G50160.1 | Symbols: | Plant protein of unknown function (DUF247)
| chr3:18598429-18601009 REVERSE LENGTH=2015
Length=2015
Score = 254 bits (137), Expect = 2e-66
Identities = 388/502 (77%), Gaps = 45/502 (9%)
Strand=Plus/Plus
Query 265 ACTTAGAGACGACGCCACAACTAGCTGGGACAAGCTTTGTATCTACAGAGTTCCA-CTCT 323
|||| ||||| |||| |||||||| |||||||| || |||||||||||||||||| || |
Sbjct 382 ACTTGGAGACAACGCTACAACTAGTTGGGACAATCTCTGTATCTACAGAGTTCCACCT-T 440
Query 324 CCCTTC-AGAAAAACGACA-ATAACTCCTACTTCCCTCAAACCGTCTCTCTTGGTCCGTA 381
||| | || ||||||| | | || || ||| | ||||||| ||||||| ||||||||||
Sbjct 441 ACCTACAAG-AAAACGATACA-AAGTCTTACATGCCTCAAATCGTCTCTATTGGTCCGTA 498
Query 382 CCACCATGG--------A-CT-AT---C----A----CA-AA-TGGCGTGCGGTCAATAT 418
||||||||| | || || | | || || |||||||||||||||||
Sbjct 499 CCACCATGGACACAAACATCTCATGCCCATGGAGCGTCACAAGTGGCGTGCGGTCAATAT 558
Query 419 GGTCATGAAACGTACCAAGCAAGGCATCGGATTGTATATTGACGCCATGAAAGAGCTCGA 478
||||||| ||| |||| || | ||||| | ||||||||||||||||||||||||||||
Sbjct 559 GGTCATGGCACGCGCCAAACACGACATCGAAATGTATATTGACGCCATGAAAGAGCTCGA 618
Query 479 AGAGAGGGCTCGTTCTTGCTACAAAGGTCGTATTGGTTTGAGCAGTAACAAGTTCACCCA 538
|||| |||||| |||||||| |||||| ||| | ||| || || |||||| |
Sbjct 619 GGAGAAAGCTCGTGCTTGCTACCAAGGTCCCATTAATATGAATAGGAATGAGTTCATAGA 678
Query 539 AATGCTAGTTCTTGATGGTTGTTTTG-TTCTCGATCTCTTCAGAGG-AGCCTA-TGAAGG 595
|||||| ||||||||||| ||||| || |||| |||||| ||| | | | ||||||
Sbjct 679 AATGCTTGTTCTTGATGGC-GTTTTTATTATCGAGATCTTCA-AGGGAACA-AGTGAAGG 735
Query 596 ATTCTTG-AAACTTGGATA--CAATCGAAACGATCCCGTTTTT-GCCATGCGAGGATCGA 651
|||| | ||| | ||||| || | || || |||| |||| | |||||||||| ||
Sbjct 736 ATTCCAGGAAA-TCGGATATGCACCC-AAT-GA-CCCGGTTTTCGGGATGCGAGGATTGA 791
Query 652 TGCATTCGATTCGACGTGACATGCTAATGCTGGAAAATCAACTTCCTTTGTTTGT-CTTA 710
|||| |||||||||||||||||| ||||||| |||||||| ||||||| || ||| || |
Sbjct 792 TGCAATCGATTCGACGTGACATGGTAATGCTAGAAAATCAGCTTCCTTGGTCTGTTCT-A 850
Query 711 AACCGGTTATTAGAGCTACAAC 732
|| |||||||| |||||||||
Sbjct 851 AAGGGGTTATTACAGCTACAAC 872
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 72138183165
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5