BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg485377
Length=1037
Score E
Sequences producing significant alignments: (Bits) Value
AT3G50210.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 1561 0.0
AT3G49630.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 872 0.0
AT3G49620.1 | Symbols: DIN11 | 2-oxoglutarate (2OG) and Fe(II)-... 789 0.0
> AT3G50210.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr3:18614170-18616452
REVERSE LENGTH=1390
Length=1390
Score = 1561 bits (845), Expect = 0.0
Identities = 976/1040 (94%), Gaps = 6/1040 (1%)
Strand=Plus/Plus
Query 1 AGAGAGAGAGATGGCAACGGACTTC-AGATCTTTACCAGTCATCGACATATCTCCTCTAT 59
||||||||| ||||| ||||||||| || |||||||||||||||||||| |||| | ||
Sbjct 214 AGAGAGAGAAATGGCGACGGACTTCAAG-TCTTTACCAGTCATCGACATCTCTCGTTTAC 272
Query 60 TGGC-CAAGTGTGATGATCCCGACATGGCTGATGATGCCGGCGTGGCCGATGTTGTCCGG 118
| | |||||||||||||||||||||||| || |||| ||| |||||||| ||||||| |
Sbjct 273 T-CCTCAAGTGTGATGATCCCGACATGGCAGAGGATGTCGGTGTGGCCGAGGTTGTCCAG 331
Query 119 CAACTGGATAAAGCTTGTCGGGACGCCGGATTCTTCTACGTGATAGGCCATGGAATTTCG 178
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 332 CAACTGGATAAAGCTTGTCGGGACGCCGGATTCTTCTACGTGATAGGCCATGGAATATCA 391
Query 179 GA-GAGTGTTATGAATAAAGTTAGGGAGATCACTCGTGGGTTCTTTAAGCTTCCTTATGA 237
|| || |||||| || || ||||| ||||||||||||| |||||||||||||||||||||
Sbjct 392 GAGGA-TGTTATTAACAAGGTTAGAGAGATCACTCGTGAGTTCTTTAAGCTTCCTTATGA 450
Query 238 AGAAAAACTTAAGATCAAGATGACTCCAGCTGCTGGATACAGAGGATATCAGAGAATTGG 297
||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 451 AGAGAAACTTAAAATCAAAATGACTCCAGCTGCTGGATACAGAGGATATCAGAGAATTGG 510
Query 298 AGAAAATGTAACCAAGGGTATACCAGATATTCACGAAGCCATTGATTGTTACAGAGAGAT 357
||||||||| ||||| || |||||||||||||| ||||||||||||||||||||||||||
Sbjct 511 AGAAAATGTGACCAAAGGAATACCAGATATTCATGAAGCCATTGATTGTTACAGAGAGAT 570
Query 358 TAAGCAGGGGAAGTATGGGGATATAGGCAAAGTTATGGAAGGGCCAAACCAGTGGCCAGA 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 571 TAAGCAGGGGAAGTATGGGGATATAGGCAAAGTTATGGAAGGGCCAAACCAGTGGCCAGA 630
Query 418 GAATCCTCAAGAGTTTAAAGAATTGATGGAGGAGTATATTAAGCTATGTACAGATCTTTC 477
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 631 GAATCCTCAGGAGTTTAAAGAGTTGATGGAGGAGTATATTAAGCTATGTACAGATCTTTC 690
Query 478 TAGAAAGATCTTGAGAGGAATCTCCTTAGCTCTTACTGGATCACCTTATGAGTTTGAGGG 537
||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct 691 TAGAAAGATTTTGAGAGGAATCTCCTTAGCTCTTGCTGGATCACCTTATGAGTTCGAGGG 750
Query 538 AAAGATGGCTGGTGACCCTTTTTGGGTGATGCGTCTTATTGGTTATCCAGGTGCTCCCTT 597
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct 751 AAAGATGGCTGGTGATCCTTTTTGGGTGATGCGTCTTATTGGTTATCCAGGTGCTGAGTT 810
Query 598 CGCAAATGGCCAACCCGAAAATGATATCGGATGTGGAGCTCACACTGACTATGGCTTGTT 657
| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 811 CACAAATGGCCAACCTGAAAATGATATTGGATGTGGAGCTCACACTGACTATGGCTTGTT 870
Query 658 AACTCTTGTAAATCAAGACGATGACAAAACTGCTCTTCAGGTGAGAAACTTGGGCGGCGA 717
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 871 AACTCTTGTGAATCAAGATGATGACAAAACTGCTCTTCAGGTGAGAAACTTGGGCGGTGA 930
Query 718 TTGGATATCAGCCGTTCCAATCCCTGGATCGTTTGTTTGCAACATCGGCGACATGTTAAA 777
|||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 931 GTGGATATCAGCCATTCCAATCCCTGGATCGTTTGTTTGCAACATCGGTGACATGTTAAA 990
Query 778 GATACTTTCAAACGGAGTATACGAATCGACACTTCATAGAGTGATCAATAACTCTCCTCT 837
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 991 GATACTTTCAAACGGAGTATACGAATCCACACTTCATAGAGTGATCAATAACTCTCCTCA 1050
Query 838 ATACCGTGTCTGTGTCGCATTCTTCTATGAGACTAATTTCGACGCGGTAGTGGAGCCATT 897
||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 1051 ATACCGTGTTTGTGTCGCATTCTTCTATGAGACTAACTTCGACGCGGTGGTGGAGCCATT 1110
Query 898 GGATATATGTAAACAGAAGTACCCTGCAGGGAGAGGAGGATCCCAAGTTTTCAAAAGGGC 957
|||||||||||||||||||||||| | |||||||||||||| ||||||||||||||| ||
Sbjct 1111 GGATATATGTAAACAGAAGTACCCGGGAGGGAGAGGAGGATGCCAAGTTTTCAAAAGAGC 1170
Query 958 TGTCTACGGAGAGCATCTCGTTAGTAAAGTCCAGACCAACTTTGCTATGTAATGGAAGGC 1017
||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1171 TGTGTATGGAGAGCATCTCGTAAGTAAAGTCCAGACCAACTTTGCTATGTAATGGAAGGC 1230
Query 1018 AGATCTCTCTCGCCTTCTTT 1037
||||||||||| ||||||||
Sbjct 1231 AGATCTCTCTCTCCTTCTTT 1250
> AT3G49630.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr3:18397759-18400255
FORWARD LENGTH=999
Length=999
Score = 872 bits (472), Expect = 0.0
Identities = 833/1003 (83%), Gaps = 42/1003 (4%)
Strand=Plus/Plus
Query 11 ATGGCAACGGACTTCAGAT--CT-TTACCAGTCATCGACAT-ATCTCCTCTATTGGCCAA 66
||||| || |||||| || || |||||||| |||||||| | |||| || ||| |||
Sbjct 1 ATGGCGACAAACTTCAAATCCCTATTACCAGTTATCGACATCA-GTCCTTTAGTGGTCAA 59
Query 67 GTGTGATGATCCCGACATGGCTGATGATGCCGGCGTGGCCGATGTTGTCCGGCAA-CTGG 125
||||||||| || ||||||| || |||||||||||||| || ||||| || || ||||
Sbjct 60 ATGTGATGATGCCAACATGGCGGAGGATGCCGGCGTGGCGGAGGTTGT-GGGAAAGCTGG 118
Query 126 ATAAAGCTTGTCGGGACGCCGGATTCTTCTACGTGATAGGCCATGGAATTTCGGA-GAGT 184
| | || ||||||||||| |||||||||||||| || || |||||||| ||||| || |
Sbjct 119 ACAGGGCCTGTCGGGACGCAGGATTCTTCTACGTAATTGGTCATGGAATATCGGAGGA-T 177
Query 185 GTTATGAA-TAAAGTTAGGGAGATCACTCGTGGGTTCTTTAAGCTTCCTTATGAAGAAAA 243
|||| || || || || | ||| | | | ||||| |||||||||||||||| ||
Sbjct 178 TTTAT-AAGGAAGGTGAGAGTGATGTCGCATCAATTCTTCGAGCTTCCTTATGAAGAGAA 236
Query 244 ACTTAAGATCAAGATGACTCCAGCTGCTGGATACAGAGGATATCAGAGAATTGGAGAAAA 303
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||
Sbjct 237 ACTTAAGATCAAGATTACTCCAGCTGCTGGATACAGAGGATATCAGAGAATCGGACTAAA 296
Query 304 -TGTAACCAA-GGGTATACCAGATATTCACGAAGCCATTGATTGTTACAGAGAGATTAAG 361
| |||| || ||| | || |||||| |||||||||||||||||||||| |||| |||||
Sbjct 297 CT-TAACGAATGGGAA-ACAAGATATGCACGAAGCCATTGATTGTTACAAAGAGTTTAAG 354
Query 362 CAGGGGAAGTATGGGGATATAGGCAAAG-TTATGGAAGGGCCAAACCAGTGGCCAGAGAA 420
|| |||||| ||||||| || || |||| ||||||||||| |||||||||||||||||||
Sbjct 355 CAAGGGAAGCATGGGGACATTGG-AAAGGTTATGGAAGGGGCAAACCAGTGGCCAGAGAA 413
Query 421 TCCTCAAGAGTTTAAAGAATTGATGGAGGAGTATATTAAGCTATGTACAGATCTTTCTAG 480
||||||||| | ||||| ||||||||||||||||||||||| || | ||||||||||||
Sbjct 414 TCCTCAAGAATACAAAGAGTTGATGGAGGAGTATATTAAGCTCTGCATAGATCTTTCTAG 473
Query 481 AAAGATCTTGAGAGGAATCTCCTTAGCTCTTACTGGATCACCTTATGAGTTTGAGGGAAA 540
||| ||||| || |||||||| ||||| ||| |||||||||||||||||||||||||||
Sbjct 474 AAATATCTTAAGGGGAATCTCATTAGCCCTTGGTGGATCACCTTATGAGTTTGAGGGAAA 533
Query 541 GATGGCTGGT-GACCCTTTTTGGGTGATGCGTCTTATTGGTTATCCAGGTGCTCCCTTCG 599
|||| || || || |||||| | |||||| || ||||||||||||||| |
Sbjct 534 GATG-CTTACAGATCCGTTTTGGATAATGCGTATTCTTGGTTATCCAGGTG-T------- 584
Query 600 CAAATGGCCAACCCGAAAATGATATCGGATGTGGAGCTCACACTGACTATGGCTTGTTAA 659
||| |||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 585 -AAA---CCAA---GAAAATGTTATCGGATGTGGAGCTCACACTGACTATGGCTTGTTGT 637
Query 660 CTCTTGTAAATCAAGACGATGACAAAACTGCTCTTCAGGTGAGAAACTTGGGCGGCGATT 719
| ||| |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||
Sbjct 638 CACTTATAAATCAAGATGATGACAAAACTGCTCTTCAGGTGAGAGACTTGGCCGGCGATT 697
Query 720 GGATATCAGCCGTTCCAATCCCTGGATCGTTTGTTTGCAACATCGGCGACATGTTAAAGA 779
||||| ||| |||| ||||||||||| ||||| ||||||||||| |||||| ||||||
Sbjct 698 GGATACCAGTTATTCCGATCCCTGGATCATTTGTCTGCAACATCGGTGACATGCTAAAGA 757
Query 780 TACTTTCAAACGGAGTATACGAATCGACACTTCATAGAGTGATCAATAACTCTCCTCTAT 839
| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||| | ||
Sbjct 758 TTCTTTCTAACGGAGTTTACGAATCCACACTTCATAGAGTGATCAATAACTCTCCCCGAT 817
Query 840 ACCGTGTCTGTGTCGCATTCTTCTATGAGACTAATTTCGACGCGGTAGTGGAGCCATTGG 899
||||||| || |||| |||||| || ||||| || |||||||| | |||||||| ||||
Sbjct 818 ACCGTGTTTGCGTCGGATTCTTTTACGAGACGAACTTCGACGCAGCGGTGGAGCCGTTGG 877
Query 900 ATATATGT-AAACAGAAGTACCCTGCAGGGAGAGGAGGATCCCAAGTTTTCAAAAGGGCT 958
|||| | | ||| |||||||||| ||| | |||| |||||||||||||||||| | |
Sbjct 878 ATATCT-TCAAAGAGAAGTACCC---AGGAAAAGGAACATCCCAAGTTTTCAAAAGAGTT 933
Query 959 GTCTACGGAGAGCATCTCGTT-AGTAAAGTCCAGACCAACTTT 1000
||||| || |||||||| ||| | ||| ||||||||| ||||
Sbjct 934 GTCTATGGGGAGCATCTGGTTCAC-AAACTCCAGACCA-CTTT 974
> AT3G49620.1 | Symbols: DIN11 | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr3:18393747-18396816
FORWARD LENGTH=1304
Length=1304
Score = 789 bits (427), Expect = 0.0
Identities = 815/997 (82%), Gaps = 47/997 (5%)
Strand=Plus/Plus
Query 33 TACCAGTCATCGACAT-ATCTCCTCTATTGGCCAAGTGTGATGATCCCGACATGGCTGAT 91
||||||| |||||||| | |||| || ||||||| ||||||||| ||||||||||||
Sbjct 177 TACCAGTTATCGACATCA-GTCCTTTACTGGCCAAATGTGATGATTTCGACATGGCTGAG 235
Query 92 GATGCCGGCGTGGCCGATGTTGTCCGG-CAACTGGATAAAGCTTGTCGGGACGCCGGATT 150
||||| || || | || || || ||| ||||||| | || |||||||||| ||||||
Sbjct 236 GATGCGGGGGTTGTGGAAGTAGT-CGGAAAACTGGACAGGGCATGTCGGGACGTCGGATT 294
Query 151 CTTCTACGTGATAGGCCATGGAATTTCGGA-GAGTGTTATGAATAAAGTTAGGGAGATCA 209
|||||||||||| || |||||||| ||||| || | |||| ||||| || | ||||| |
Sbjct 295 CTTCTACGTGATTGGTCATGGAATATCGGATGA-TCTTATAAATAAGGTGAAAGAGATGA 353
Query 210 CTCGTGGGTTCTTTAAGCTTCCTTATGAAGAAAAACTTAAGATCAAGATGACTCCAGCTG 269
| | | |||||| |||||||||| || || ||||||||||||||||| |||||| |||
Sbjct 354 CGCATCAGTTCTTCGAGCTTCCTTACGAGGAGAAACTTAAGATCAAGATTACTCCAACTG 413
Query 270 CTGGATACAGAGGATATCAGAGAATTGGAGAAAATGTAACCAAG-GGTATACCAGATATT 328
|||||||||||||||| || |||||||||| |||| | | | || || | || ||||||
Sbjct 414 CTGGATACAGAGGATACCAAAGAATTGGAGTAAATTTTA-CGAGTGGGAAACAAGATATG 472
Query 329 CACGAAGCCATTGATTGTTACAGAGAGATT-AAGCAGGGGAAGTATGGGGATATAGGCAA 387
||||||||||||||||||||||||||| || ||||| ||||| ||||||| || || ||
Sbjct 473 CACGAAGCCATTGATTGTTACAGAGAG-TTCAAGCAAGGGAAACATGGGGACATCGG-AA 530
Query 388 A-GT-TATGGAAGGGCCAAACCAGTGGCCA-GAGAATCCTCAAGAGTTTAAAGAATTGAT 444
| || | ||||||||||||||||||||||| || ||||||||||||| ||||| || ||
Sbjct 531 AGGTCT-TGGAAGGGCCAAACCAGTGGCCAGGA-AATCCTCAAGAGTACAAAGATTTAAT 588
Query 445 GGAGGAGTATATTAAGCTATGTACAGATCTTTCTAGAAAGATCTTGAGAGGAATCTCCTT 504
|||| ||||||||||||| || ||||||||||||||||| ||||| || |||||||| ||
Sbjct 589 GGAGAAGTATATTAAGCTGTGCACAGATCTTTCTAGAAATATCTTAAGGGGAATCTCATT 648
Query 505 AGCTCTTACTGGATCACCTTATGAGTTTGAGGGAAAGATGGCTG-GTGACCCTTTTTGGG 563
||| ||| ||||||||||||||||||||||||||||||| || | |||||||||||||
Sbjct 649 AGCCCTTGGTGGATCACCTTATGAGTTTGAGGGAAAGATG-CTTAGAGACCCTTTTTGGG 707
Query 564 TGATGCGTCTTATTGGTTATCCAGGTGCTCCCTTCGCAAATGGCCAACCCGAAAATGATA 623
| |||||| | |||||||||||||||| | ||| |||| ||||||| ||
Sbjct 708 TAATGCGTATCATTGGTTATCCAGGTG-T--------AAA---CCAA---GAAAATGTTA 752
Query 624 TCGGATGTGGAGCTCACACTGACTATGGCTTGTTAACTCTTGTAAATCAAGACGATGACA 683
| |||||||||||||||||||||||||||||||| || ||| |||||||||| ||||| |
Sbjct 753 TTGGATGTGGAGCTCACACTGACTATGGCTTGTTGACGCTTATAAATCAAGATGATGATA 812
Query 684 AAACTGCTCTTCAGGTGAGAAACTTGGGCGGCGATTGGATATCAGCCGTTCCAATCCCTG 743
|||||||||||||||||| |||| ||| ||| ||||||||| |||| |||| |||||||
Sbjct 813 AAACTGCTCTTCAGGTGAAAAACGTGGACGGTGATTGGATACCAGCTATTCCGATCCCTG 872
Query 744 GATCGTTTGTTTGCAACATCGGCGACATGTTAAAGATACTTTCAAACGGAGTATACGAAT 803
|||| ||| | ||||||||||| |||||||||| |||||| ||||||||||| ||| |||
Sbjct 873 GATCATTTATCTGCAACATCGGTGACATGTTAACGATACTATCAAACGGAGTTTACCAAT 932
Query 804 CGACACTTCATAGAGTGATCAATAACTCTCCTCTATACCGTGTCTGTGTCGCATTCTTCT 863
| ||||| |||| ||| ||||||||||||||| ||||||||| ||||| ||||| ||||
Sbjct 933 CCACACTACATAAAGTAATCAATAACTCTCCTAAATACCGTGTATGTGTTGCATTTTTCT 992
Query 864 ATGAGACTAATTTCGACGCGGTAG-TGGAGCCA-TTGGATATATGTAAACAGAAGTACCC 921
| |||||||| ||||| |||| || | |||||| ||| |||| | |||| ||||| | ||
Sbjct 993 ACGAGACTAACTTCGAGGCGG-AGGTAGAGCCACTTG-ATATCTTTAAAGAGAAGCATCC 1050
Query 922 TGCAGGGAGAGGAGGATCCCAAGTTTTCAAAAGGG-CTGTCTACGGAGAGCATCTCG-TT 979
| | | || | ||| |||||| |||||| | | ||||| ||| ||||||| | ||
Sbjct 1051 A-C-GAAA-AGAAACATCTCAAGTTGCCAAAAGAGTC-GTCTATGGACAGCATCT-GATT 1105
Query 980 AGTAAAGTCCAGACCAAC-TTTGCTA-TGTAATGGAA 1014
| ||||||| ||| ||| ||||| | | || |||||
Sbjct 1106 AACAAAGTCCTGAC-AACCTTTGCAAATTTAGTGGAA 1141
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 50836956764
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5