BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg485383
Length=1239
Score E
Sequences producing significant alignments: (Bits) Value
AT3G50300.1 | Symbols: | HXXXD-type acyl-transferase family pr... 1568 0.0
AT3G50290.1 | Symbols: | HXXXD-type acyl-transferase family pr... 403 2e-111
AT3G50270.1 | Symbols: | HXXXD-type acyl-transferase family pr... 392 4e-108
> AT3G50300.1 | Symbols: | HXXXD-type acyl-transferase family
protein | chr3:18643955-18645406 FORWARD LENGTH=1452
Length=1452
Score = 1568 bits (849), Expect = 0.0
Identities = 1074/1182 (91%), Gaps = 17/1182 (1%)
Strand=Plus/Plus
Query 61 GTCctctctctct-ctGCTGCTTTAGAGATCTACTTCCCTTTCGCGGGTCGTCTTGTCAA 119
||||||||||||| | | | || |||||||||||||||| || || ||||||||||||||
Sbjct 268 GTCCTCTCTCTCTAC-G-T-CTCTAGAGATCTACTTCCCCTTAGCTGGTCGTCTTGTCAA 324
Query 120 AGTGAACAACCATGAAGATAATACGATATCGCTTTACATCGACTGTGACGACGGCCGTGG 179
||| |||||||||||||| |||||| | ||| ||||||||||||||||||||||||||||
Sbjct 325 AGTCAACAACCATGAAGACAATACGGTGTCGTTTTACATCGACTGTGACGACGGCCGTGG 384
Query 180 TG-CCAGTTTCGTCCATGCCATAGCAGAATCTATCTCGGTAAGCGATATCTTTCACCCTC 238
|| | | ||| |||||||| ||||| |||||| ||||||||||||||||| |||| ||||
Sbjct 385 TGTCAAATTT-GTCCATGCTATAGCCGAATCTGTCTCGGTAAGCGATATCCTTCAACCTC 443
Query 239 ATGGCTCTGTTCCTGACTTTTTCAAGCTTTTCTTCCCCGTGAACGGTGTTAGAAGCATCG 298
|||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||
Sbjct 444 ATGGCTCTGTTCCTGACTTTTTCAGGCTTTTCTTTCCCATGAACGGTGTTAGAAGCATCG 503
Query 299 ACGGACTCTCGGAGCCCTTGCTTGCTGTACAAGTCACCGAGATAAAAGATGGAATCGTCA 358
|||| ||||| |||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct 504 ACGGGCTCTCAGAGCCCTTACTTGCTTTACAAGTCACCGAGATAAAAGATGGAATCGTCA 563
Query 359 TTAGTTACGGTTACAACCACTTGGTGGCCGATGGTTCTTCTATGTGGAAATTTATCCACG 418
|||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 564 TTAGTTTCGGTTACAACCACTTGGTGGCTGATGGTTCTTCTATGTGGAACTTTATCCACG 623
Query 419 GTTGGTCAAAGATTTTCTTGAATGGTGAATGGGAGAATCATCATCAGCCTCTTGTCCTCA 478
|||||||||| ||| |||||||||| | |||||| || |||||||||||| |||||||
Sbjct 624 TTTGGTCAAAGCTTTGCTTGAATGGTCAGTGGGAG-AT--TCATCAGCCTCTAGTCCTCA 680
Query 479 GAGGATGGTTCCTCGACAAGATCGATTTCCCGATCCATATTCCGGTTTCGGAGATAGAGA 538
||||||||||||||||||| || |||||||| || |||||||||| ||| ||||||||||
Sbjct 681 GAGGATGGTTCCTCGACAACATTGATTTCCCTATTCATATTCCGGCTTCAGAGATAGAGA 740
Query 539 CAGAGAGGGTGAA-AAATCGTGAAACTTCGACGAAAGAGAGAGTTTTTCACTTCACAAAA 597
||||||||| || |||||||||| ||| || || ||||||||||||||||||||||||
Sbjct 741 CAGAGAGGG-CAAGAAATCGTGAAGTTTCAACTAAGGAGAGAGTTTTTCACTTCACAAAA 799
Query 598 GAGAAAATTTCATATCTTAAAGCTAAAGCTAACGGCGAAATAGACTCAAGTGACATAAAT 657
|||||| ||||| |||| |||||||||||||||| |||||||| |||||| ||||||||
Sbjct 800 GAGAAACTTTCAGATCTCAAAGCTAAAGCTAACGACGAAATAGGCTCAAGCGACATAAAA 859
Query 658 ATATCATCCCTTCAAGCTGTTTTGGCACATCTATGGCGATCAATAGTTAGACACAGTGGT 717
|||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 860 ATATCATCTCTTCAAGCAGTTTTGGCTCATCTATGGCGATCAATAGTTAGACACAGTGGT 919
Query 718 CTAAACCGAGAAGAAGAGAGTCATTGCGGTGTAGCAGCGGATTTCAGGCAGAGGCTAAAC 777
||||||| |||||||||||||| ||||| |||||||| ||||| |||||||||||||||
Sbjct 920 CTAAACCAAGAAGAAGAGAGTCGCTGCGGAGTAGCAGCAGATTTTAGGCAGAGGCTAAAC 979
Query 778 CCTCCACTTGATAAAGACTGTTTTGGCAATGTAGCCAATCTTGGGATGGCTACAGCCACC 837
||||| |||||||||||||||||||| |||||||||||||||||| | ||||||||||
Sbjct 980 CCTCCGCTTGATAAAGACTGTTTTGGTAATGTAGCCAATCTTGGGTTAACTACAGCCACA 1039
Query 838 GTGGGAGATTTGGTCGATCGTGGACTGGGATGGGCTGCTTTGCAAATAAATAAAACTGTG 897
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1040 GTGGGGGATTTGCTCGATCGTGGACTGGGATGGGCTGCTTTGCAAATAAATAAAACTGTG 1099
Query 898 AGGTCGCAAACGAATGAAGACTATAGAACTTTTGCTGAGAATTGGGTTAGAAATGGTAAG 957
|||| ||| ||||||||| ||| |||||||||| ||||||||||||||||||||||||||
Sbjct 1100 AGGTTGCACACGAATGAAAACTTTAGAACTTTTTCTGAGAATTGGGTTAGAAATGGTAAG 1159
Query 958 ATCCCAAGAATTGATGTTAGAAGTAAAAGGGGTGATCATGTTTTTATTGTCAATAACTCT 1017
||||||||||||||||||||||||| || ||||||||||| |||||| |||| |||||||
Sbjct 1160 ATCCCAAGAATTGATGTTAGAAGTAGAATGGGTGATCATGGTTTTATGGTCAGTAACTCT 1219
Query 1018 CCTTGGTTCAAAGTTTATGATAATGATTTCGGTTTGGGTAAACCGATTGCCGTTCGAGCT 1077
||||||||| |||| || ||||||||||||||||| ||||||||||| || |||||||||
Sbjct 1220 CCTTGGTTCCAAGTGTACGATAATGATTTCGGTTTAGGTAAACCGATGGCTGTTCGAGCT 1279
Query 1078 GGACCGGCAAATGGTATTGGTGGCAAGCTTGTAGTTTTTCGAGGGATCGAAGAAGGAAGT 1137
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1280 GGACCGGCTAATGGCATTGGTGGCAAGCTTGTAGTTTTTCGAGGGATCGAAGAAGGAAGT 1339
Query 1138 ATCGATGTTCATGCGATATTGACCTTCTCGTTATGGTCCGATGTGCTAGTGAACTTATTT 1197
|||||||| ||||||||||||||||| ||||||||||| |||||| || |||||||||||
Sbjct 1340 ATCGATGTCCATGCGATATTGACCTTATCGTTATGGTCTGATGTGTTACTGAACTTATTT 1399
Query 1198 GATGATGTTGAATCTACTATGGAGAATGTAACAATTACATGA 1239
||||||||||||||| | |||||||||||| ||||||||
Sbjct 1400 GATGATGTTGAATCT--T-TGGAGAATGTAA---TTACATGA 1435
> AT3G50290.1 | Symbols: | HXXXD-type acyl-transferase family
protein | chr3:18640172-18640993 FORWARD LENGTH=822
Length=822
Score = 403 bits (218), Expect = 2e-111
Identities = 630/819 (77%), Gaps = 67/819 (8%)
Strand=Plus/Plus
Query 286 GTTAGAAGCATCGACGGACTCTCGGAGCCCTTGCTTGCTGTACAAGTCACCGAGATAAAA 345
|||| ||| ||| |||| ||||||||||||||||||||| | |||||||||||| | ||
Sbjct 28 GTTAAAAGTATCTACGGTCTCTCGGAGCCCTTGCTTGCTTTGCAAGTCACCGAGTTGAAG 87
Query 346 GATGGAATCGTCATTAGTTACGGTTACAACCACTTGGTGGCCGATGGTTCTTCTATGTGG 405
||||| || |||| |||| |||||||| ||| |||| |||||||| |||| || |||
Sbjct 88 GATGGTGTCTTCATCAGTTTTGGTTACAATCACATGGTTGCCGATGGAGCTTCGATTTGG 147
Query 406 AAATTT-ATCCACGGTTGGTCAAAGATTTTCTTGAATG-GT--GA--AT-GGGAGAATCA 458
||||| || | |||||| ||||||| || |||| | || || | ||||||
Sbjct 148 -AATTTCTTCAATACTTGGTCCAAGATTTGCTCAAATGAATACGATCATCAGAAGAATC- 205
Query 459 TCATCAGCCTCTTGTCCTCAGAGGATGGTTCCTCGACAAGATCGATTTCCCGATCCATAT 518
||| |||||||||| ||||||||||||||||||||||||||||||| || |||||||||
Sbjct 206 TCA--AGCCTCTTGTTCTCAGAGGATGGTTCCTCGACAAGATCGATTACCGGATCCATAT 263
Query 519 TCCGGTTTCGGAGATAGA-G-ACAGA-GAG-GGTGA-A-AAATC-G-TG-AAACTTCGAC 569
||||| ||| ||| || | | || || | ||| | || | || |||| |
Sbjct 264 TCCGGCTTCTGAGGCGGATGCCCCGACAAGTGATGAGATTTCTCAGATGCCCACTT---C 320
Query 570 GAAAGAGAGAGTTTTTCACTTCACAAAAGA-GAAAATTTCATATCTTAAAGCTAAAGCTA 628
||||||||||||||||||||||||||| || ||| |||||| | || ||| ||||||| |
Sbjct 321 GAAAGAGAGAGTTTTTCACTTCACAAA-GAAGAATATTTCAGAGCTCAAAACTAAAGCCA 379
Query 629 ACGGCGAAATAGACTCAAGTGACATAAAT-ATATCATCCCTT-CAAGCTGTTTTG-GCAC 685
|||| |||| | |||||||||| ||| | || || || || ||||| | ||| ||||
Sbjct 380 ACGGTGAAACCGGCTCAAGTGACCTAA-TCATCTCGTCT-TTACAAGC-GCTTTCCGCAC 436
Query 686 ATCTATGGCGATCAAT-AGTTAGACACAGTGGTCT-AAACCGAGAAGAAGAGA-GTCATT 742
|| ||||| | ||||| | | |||||||||||| | |||| |||||||||| | | ||||
Sbjct 437 ATTTATGGAGGTCAATTA-TCAGACACAGTGGTATGAAAC-GAGAAGAAGAAACG-CATT 493
Query 743 GCGGTGTAGCAGCGGATTTCAGGCAGAGGCTAAACCCTCCACTTGATAAAGACTGTTTTG 802
|| || || | |||||| |||||||||||||||||||| ||||| ||||| |||||||
Sbjct 494 GCAAAGTGGCTGTGGATTTGAGGCAGAGGCTAAACCCTCCGCTTGACAAAGAGTGTTTTG 553
Query 803 GCAATGT-AGCCAATCTTGGGATGGCTACAGCCACCGT-GGGAGA--TTTGGTCGATCGT 858
| || || | | ||||| ||| | ||||| | ||| || ||| || ||| | |||| |
Sbjct 554 GGAACGTGAAC-AATCTCGGGGTAGCTACTGTCACGGTTGGG-GAACTTTTG--GATCAT 609
Query 859 G-GACTGGGATGGGCTGCTTTGCAAATAAATAAAACTG-TGAGGTCGCAAAC-GAATGAA 915
| || ||| ||||||||||||||||||| ||||| || ||||||| ||||| || |||
Sbjct 610 GAGATTGGT-TGGGCTGCTTTGCAAATAAGTAAAA-TGGTGAGGTCTCAAACTGA-TGA- 665
Query 916 GAC-TATAGAACTTTTGCTGAGAATTGGGTTAGA-AATGGTAA-GATCCCAAGAATTGAT 972
|| |||| ||||||||||||||||||||||| | |||| ||| |||| ||| || | |
Sbjct 666 GAAGTATAAAACTTTTGCTGAGAATTGGGTTA-ACAATG-TAAAGATCTCAAAAACAGGT 723
Query 973 GTTAGAAGTAAAAGGG---GTGAT-CATGTTTTTATTGTCAATAACTCTCCTTGGTTCAA 1028
| | |||||| || || ||||| | ||| || | |||| |||||||||||| |
Sbjct 724 GATGGAAGTAGAATGGTTTGTGATTC-TGTGGTTGTC-TCAAG--CTCTCCTTGGTTTGA 779
Query 1029 AGTTTATGATAATGATTTCGGTTTGGGTAAACCGATTGC 1067
|| |||| |||||||| |||| ||| || ||||||||
Sbjct 780 TGTGTATGGGAATGATTTTGGTTGGGG-AA-CCGATTGC 816
> AT3G50270.1 | Symbols: | HXXXD-type acyl-transferase family
protein | chr3:18635920-18637341 FORWARD LENGTH=1422
Length=1422
Score = 392 bits (212), Expect = 4e-108
Identities = 840/1131 (74%), Gaps = 91/1131 (8%)
Strand=Plus/Plus
Query 64 ctctctctctctGCTGCTTTAGAGATCTACTTCCCTTTCGCGGGTCGTCTTGTCAAAGT- 122
||||||||| || | || || ||||||||||||||||||||||||||||| ||||||
Sbjct 198 CTCTCTCTCACT-C-GCCTTGGAGATCTACTTCCCTTTCGCGGGTCGTCTCGTCAAAACA 255
Query 123 GAACAACCATGAAGATAATACGATATCGCTTTACATCGACTGTGACGACGGCCGTGGTGC 182
|| || | |||||| ||||| | || ||| ||| |||||||| | | | ||| ||
Sbjct 256 GAG-AATCTTGAAGACGATACGGTGTCATTTTTCATAGACTGTGATGGCT-C--TGGCGC 311
Query 183 CAG-TTTCGTCCATGCC-ATAGCAGAATCTATCTCGGTAAGCGATAT-CTTTCACCCTCA 239
|| |||| |||| || | |||| ||||| |||| || || ||||| ||| || ||| |
Sbjct 312 TAGATTTC-TCCACACCGA-AGCAAAATCTGTCTCCGTGAGTGATATTCTT-CAGCCTGA 368
Query 240 TGGCTCTGTTCCTGACTTT-TTCAAGCTT-TTCTTCCCCGT-GAACGGTGTT-A-GAAGC 294
||| ||||||||||| ||| || ||| | ||||| |||| || || | || | || ||
Sbjct 369 TGGTTCTGTTCCTGA-TTTCTTGAAG-TACTTCTTTCCCGCCGA-CGAT-TTCAAGA-GC 423
Query 295 A-TCGACGGACTCTCGGAGCCCTTGCTTGCTGTACAAGTCACCGAGATAAAAGATGGAAT 353
| || || ||||| ||||||||||| | ||||||| |||||||| || || ||| |
Sbjct 424 TGT-GATGGTGTCTCGTTGCCCTTGCTTGTTATACAAGTTACCGAGATGAAGGACGGAGT 482
Query 354 CGTCATTAGTTACGGTTACAACCACTTGGTGGCCGATGGT-TCTTCTATGTGGAAATTTA 412
|||| |||| | ||||||||||| ||||||| || ||| | ||| ||||||| |||
Sbjct 483 TTTCATCAGTTTCTGTTACAACCACATGGTGGCAGACGGTGT-TTCCATGTGGAGTTTTT 541
Query 413 TCCACGGTTGGTCAAAGATTTTCTTGA-ATGGTGAATGGGAGAATCATCATCAGCCTCTT 471
|| | |||||| ||||||| || | | ||| ||| ||| | || ||||||||
Sbjct 542 TCGATACTTGGTCCAAGATTTGCTCAACA-GGTTCATGTTTCAATTA-CA--AGCCTCTT 597
Query 472 GTCCTCAGAGGATGGTTCCTCGACAAGATCGATTTCCCGATCCATATTCCGGTTTCGGAG 531
|| |||| ||| |||||||| || |||||||| ||| |||||| |||| ||||| |||
Sbjct 598 GTTCTCAAAGGGTGGTTCCTTGAGGGGATCGATTACCCAATCCATGTTCCAGTTTCAGAG 657
Query 532 ATAGAGA---CAG-AG-AGG--GTGAAAAATC----GTGAA-ACTTCGACGAAAGAGA-G 578
||||| || | | | ||||| || ||| | || |||||||| | |
Sbjct 658 GCAGAGAGGTCACCACCAAGCCGTGAACCTTCTTCCGTGCCCA-TT--ACGAAAGA-ATG 713
Query 579 -AGTTTTTCACTTCACAAAAGA-GAAAATTTCATATCTTAAAGCTAAAGCTAACGGCGAA 636
| |||||||||||||||| || ||| |||||| |||| ||||||||||| ||| ||||
Sbjct 714 GA-TTTTTCACTTCACAAA-GAAGAATATTTCAGATCTCAAAGCTAAAGCCAACAGCGAG 771
Query 637 ATAGACTC-A--AGTGACATA-AA-TATATCATCCCTTCAAGCTGTTTTGGCACATCTAT 691
|| | ||| | |||||| || || | | ||||| |||||||| |||| ||||||| | |
Sbjct 772 ATTGCCTCCAGTAGTGACCTAGAAGT-T-TCATCTCTTCAAGCGGTTTCGGCACATATGT 829
Query 692 GGCGATCAAT-AGTTAGACACAGTGGTCTAAACCGAGAAGAAGAGAGTCATTGCGGTGTA 750
|||||||||| | | |||||||||||| | | ||||||| || ||| |||||| | ||
Sbjct 830 GGCGATCAATCA-TCAGACACAGTGGTGTGAGCCGAGAACAAAAGACACATTGCAGACTA 888
Query 751 GCAGCGGATTTCAGGCAGAG-GCTAAACCCTCCACTTGATAAAGACTGTTTTGGCAATGT 809
| | ||| || ||||| || | |||| || || ||||| ||||| |||||||| ||| |
Sbjct 889 GTGGTGGACTTGAGGCAAAGAG-TAAATCCACCGCTTGAGAAAGATTGTTTTGGGAATAT 947
Query 810 AGCCAATCTTGGGATG-GCTACAGCCACCGTGGGAGATTTGGTCGATCGTGGACTGGGAT 868
| | ||||| || || | | ||||||||| ||| | | |||||||| |||| |
Sbjct 948 GGTCTATCTTTC-ATCAGCCATAACCACCGTGGAAGAGCTCTTGGATCGTGGTTTGGG-T 1005
Query 869 G-GGCTGCTTTGCAAATAAATAAAACT-GTGAGGTCGCAAACGAATGAAGACTA-TAGAA 925
| ||||||||||||||||| |||| | || || ||||||||||||||| ||| || ||
Sbjct 1006 GAGGCTGCTTTGCAAATAAG-AAAATTAGTTAGCTCGCAAACGAATGAA-ACTTGTAAAA 1063
Query 926 CTTTTGCTGA-GAATTGGGTTAGAAATGGTAAGATCCCAAGAATTGATG--TTAGAAGTA 982
|||||| || || ||||||||||||| ||||| || || | || | | || | ||||
Sbjct 1064 GTTTTGCAGAAGA-TTGGGTTAGAAATATTAAGAACCTAA-A-TTCAGGCATTGGCAGTA 1120
Query 983 AAAGG-GGTGAT-CATGTTTTTATTGTCAATAACTCTCCTTGGTTCAAAGTTTATGATAA 1040
|| | ||| || | | | |||| | ||| |||||| ||||| | || || | ||
Sbjct 1121 AA-GTAGGTAATAC-TATAGTTATCG-CAAG--CTCTCCGCGGTTCGAGGTGTACAACAA 1175
Query 1041 TGATTTCGGTTTGGGTAAACCGATTGCCGTTCGAGCTGGACCGGCAAATGGTATTGGTGG 1100
|||||||||| ||| ||||| ||||| ||||||||||||| | ||| |||| |||
Sbjct 1176 AGATTTCGGTTGGGGCAAACCTATTGCAATTCGAGCTGGACCATCCAATAGTATCAATGG 1235
Query 1101 CAAGCTTGT-AGTTTTTCGAGGGA-TC-GAAGAAGGAAGTATCGATGTTCA 1148
||||||| | |||||||| ||||| || | ||||||||||| ||||||||
Sbjct 1236 CAAGCTT-TCAGTTTTTC-AGGGAATCAGT-GAAGGAAGTATTGATGTTCA 1283
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 60893261085
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5