BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg485418
Length=1983
Score E
Sequences producing significant alignments: (Bits) Value
AT3G50700.1 | Symbols: AtIDD2, IDD2 | indeterminate(ID)-domain ... 2647 0.0
AT5G66730.1 | Symbols: | C2H2-like zinc finger protein | chr5:... 558 6e-158
AT3G13810.2 | Symbols: IDD11 | indeterminate(ID)-domain 11 | ch... 425 6e-118
AT5G44160.1 | Symbols: NUC | C2H2-like zinc finger protein | ch... 246 5e-64
AT1G14580.1 | Symbols: | C2H2-like zinc finger protein | chr1:... 230 5e-59
> AT3G50700.1 | Symbols: AtIDD2, IDD2 | indeterminate(ID)-domain
2 | chr3:18840411-18842950 FORWARD LENGTH=2014
Length=2014
Score = 2647 bits (1433), Expect = 0.0
Identities = 1854/2039 (91%), Gaps = 102/2039 (5%)
Strand=Plus/Plus
Query 1 aaaaaaaaTAATAATTGTGCCAATagagagaaagagagagagagagacagaagaagaaag 60
||||| |||||||||||||||||| |||| ||| | ||||||||||||||||||||||
Sbjct 12 AAAAATAATAATAATTGTGCCAAT--AGAG--AGA-A-AGAGAGAGACAGAAGAAGAAAG 65
Query 61 aaAGGTTCCTTTGTCTCGGAAGAACCAAAGAGCCAACACaaaaaaaaaaaaaaaaaGGTT 120
||||||||||||||||||||| |||||||||||| || | | |||||||||||||||
Sbjct 66 AAAGGTTCCTTTGTCTCGGAACAACCAAAGAGCC-AC-C--ACCCAAAAAAAAAAAGGTT 121
Query 121 CGTAGCTTTTCTTTCTTTCTTTCACACGAAATCTCACGAGCCGCCTTATATATTTCTTCT 180
| |||||||| ||||||||||||||||||||||||||||| |||| | ||||||||||
Sbjct 122 CTTAGCTTTT-TTTCTTTCTTTCACACGAAATCTCACGAGACGCC---T-TATTTCTTCT 176
Query 181 TCTCTGTCTCTTTCCGACGGCGTAACTCTCCGGTGTAATCTCAGCCGTTAGATCTTTGTT 240
||||||||||||||||||||||||||||||||||| |||||||| | || | ||
Sbjct 177 TCTCTGTCTCTTTCCGACGGCGTAACTCTCCGGTGGAATCTCAG-C------TC--TCTT 227
Query 241 TTCAGTAGGAGAAGTTTTAGTTTTTAAATGTAA------------t--ttt---ttt-AA 282
||||||| ||||||||| || ||||||||||| | ||| ||| ||
Sbjct 228 ATCAGTAGAAGAAGTTTTGGTCTTTAAATGTAATTTTTTTGGTTTTGCTTTAAATTTCAA 287
Query 283 TCGTTGTTATCAGAAAAAGTAGGTAGC-AAAAAAGAGA-TTTTTACGAAAAGCAGATTGA 340
||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct 288 TCGTTGTTATCAGAAAAAGTAGGTAGCAAAAAAAGAGATTTTTTACGAAAAGCAGATTGA 347
Query 341 CTGGTAGCTGAAGAACAACGGAGGAGAATTATAGAAA-GAGTaaaaaataaaaaCCCTAA 399
|||||||||| | |||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct 348 CTGGTAGCTG-A-AACAACGGAGGAGAATTATAGAAACGAGTAAAAAA-CAAAACCCTAA 404
Query 400 AGGTTGAAACTTGGTTGACG---AAAATAAGCTCAAAtttttttCTTCATTTATTTCATT 456
|||||||||||||||||||| ||||| |||| | |||||||||||||||||||||||
Sbjct 405 AGGTTGAAACTTGGTTGACGAAAAAAATGAGCTGATTTTTTTTTCTTCATTTATTTCATT 464
Query 457 CTAAACT-TTTGTT---ATATTTAAGAATCAGTAAGAAACaaaaaaaaaaaaaaaaaaca 512
|| |||| ||| || ||||||||||||||||||||||| |||||||||||
Sbjct 465 CTTAACTCTTT-TTCACATATTTAAGAATCAGTAAGAAAC---------AAAAAAAAACA 514
Query 513 gagtgagactaaaaaaaaaaaGATGCCGGTTGATTTAGATAACTCTTCCACAGTTTCCGG 572
|||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 515 GAGTGAGACT--AAAAAAAAAGATGCCGGTAGATTTAGATAACTCCTCCACAGTTTCCGG 572
Query 573 TGAAGCAAGTGTTTCTATCTTATCCACCGG------------A-----AAA-TCCACCGG 614
||||||||||||||| |||| ||||||||| | ||| ||||||||
Sbjct 573 TGAAGCAAGTGTTTCAATCTCATCCACCGGAAACCAAAACCCACTTCCAAACTCCACCGG 632
Query 615 AAAGAAGAAACGTAACCTCCCCGGCATGCCTGATCCAGAGTCAGAAGTTATAGCTTTATC 674
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 633 AAAGAAGAAACGTAACCTCCCTGGCATGCCTGATCCAGAGTCAGAAGTTATAGCTTTATC 692
Query 675 ACCAAAAACATTACTAGCAACAAACAGATTCGTATGTGAAATCTGTAACAAAGGGTTTCA 734
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 693 ACCAAAAACATTACTAGCAACAAACAGATTTGTTTGTGAAATCTGTAACAAAGGGTTTCA 752
Query 735 AAGAGACCAAAATCTTCAACTTCATCGCCGTGGACACAATTTACCATGGAAGCTTCGTCA 794
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 753 AAGAGACCAGAATCTTCAACTTCATCGTCGTGGACACAATTTACCATGGAAGCTTCGTCA 812
Query 795 GAAATCGAACAAAGAAGTGAAGAAAAAAGTCTATGTTTGTCCTGAAGTTAGTTGTGTTCA 854
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 813 GAAATCAAACAAAGAAGTGAAGAAAAAAGTCTATGTTTGTCCTGAAGTTAGTTGTGTTCA 872
Query 855 TCATGACCCTTCACGTGCTTTAGGAGATCTAACTGGAATCAAGAAACACTTTTGTCGGAA 914
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 873 TCACGACCCTTCACGTGCTTTAGGAGATCTAACTGGAATCAAGAAACACTTTTGTCGGAA 932
Query 915 ACATGGTGAGAAGAAGTGGAAATGTGATAAATGTTCAAAGAAATACGCTGTTCAATCTGA 974
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 933 ACATGGTGAGAAGAAGTGGAAATGTGATAAATGTTCTAAGAAATACGCTGTTCAATCTGA 992
Query 975 TTGGAAAGCTCATTCCAAGATTTGTGGTACTAAAGAGTATAAATGTGATTGTGGGACTCT 1034
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 993 TTGGAAAGCTCATTCCAAGATTTGTGGTACTAAAGAGTATAAATGTGATTGTGGTACTCT 1052
Query 1035 GTTTTCTAGGAGGGATAGTTTTATAACGCATAGAGCATTTTGTGATGCTTTGGCTGAAGA 1094
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1053 GTTTTCTAGGAGGGATAGTTTTATAACGCATAGAGCTTTTTGTGATGCTTTGGCTGAAGA 1112
Query 1095 AAGTGCGAGAAGTCAT-A-A-TCAGAGTAAGAAACAGAATCCAGACATTTTGACCCGGAA 1151
|| ||||||||||||| | | ||||||||||||||||||||| || ||||||||||||||
Sbjct 1113 AAATGCGAGAAGTCATCATAGTCAGAGTAAGAAACAGAATCCTGAAATTTTGACCCGGAA 1172
Query 1152 AAAACCGGTACCCGACCCGAATCCTGCTCCGGTGGATACTGATCAGTCTGCTAAAATCAA 1211
||| ||||||||| ||||| ||||||||||||||||||||| |||||||||||||||
Sbjct 1173 AAACCCGGTACCCAACCCGGTTCCTGCTCCGGTGGATACTGA---GTCTGCTAAAATCAA 1229
Query 1212 ATCTTCCTCGACTTTAACAATTAAGCAATCAGGATCCCCCAAAACCCCTCCTGAAATCGT 1271
||| |||||||||||||||||||||||||||| ||| || ||||||||||||||||||||
Sbjct 1230 ATCCTCCTCGACTTTAACAATTAAGCAATCAGAATCTCCAAAAACCCCTCCTGAAATCGT 1289
Query 1272 TCAAGAAGCTCCAAAACTGACCGGTGTAAATGTTGTTACACGCAGCGGGGTTTTCGCAGG 1331
||||||||||||||||| |||| || |||||||||||||| ||| ||| |||||||||||
Sbjct 1290 TCAAGAAGCTCCAAAACCGACCAGTTTAAATGTTGTTACAAGCAACGGTGTTTTCGCAGG 1349
Query 1332 CTTATTCGAATCTTCCTCGGCTTCTCCAAGCATATACACAACATCGTCTTCTTCGCCA-A 1390
|||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |
Sbjct 1350 CTTATTCGAATCTTCCTCGGCTTCTCCAAGTATATACACAACATCGTCTTCTTCGA-AGA 1408
Query 1391 GTCTTTTCGCGCCATCTTCGTCCATCGAACCTATCTCTTTGGGTCTTTCAACAAGTCATG 1450
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1409 GTCTTTTCGCGTCATCTTCGTCCATTGAACCTATCTCTTTGGGTCTTTCAACAAGTCATG 1468
Query 1451 GATCATCCTTTCTCGGGTCAAACCGGTTCCAAGCTCAACCAGCGATGTCAGCAACCGCTT 1510
||||||||||||| ||||||||||||||||| ||||| || |||||||||||||||||||
Sbjct 1469 GATCATCCTTTCTTGGGTCAAACCGGTTCCACGCTCAGCCCGCGATGTCAGCAACCGCTT 1528
Query 1511 TACTTCAAAAGGCAGCTCAAATGGGAGCATCTTCTTCAGGAGGTTCATTGCTTCGCGGGT 1570
|||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct 1529 TACTTCAAAAAGCAGCTCAAATGGGAGCAGCTTCTTCAGGAGGTTCATTGCTTCACGGGT 1588
Query 1571 TAGGGATAGTTTCATCAACTTCAACTTCTATGGACTCAATAGTCCCTCATGGACTAGGAT 1630
|||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||
Sbjct 1589 TAGGGATAGTTTCATCCACTTCAACTTCTATAGACGCAATAGTCCCTCATGGACTAGGAT 1648
Query 1631 TAGGACTGCCTTGTGGTGGCGAAAGCAGCTCGGGTTTGAAAGAGCTCATGATGGGTAATT 1690
||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||
Sbjct 1649 TAGGACTGCCTTGTGGTGGCGAAAGCAGCTCGGGTTTAAAAGAGCTTATGATGGGGAATT 1708
Query 1691 CATCCGTGTTTGGTCCGAAACAAACAACATTAGACTTTCTCGGTTTAGGTAGAGCGGTTG 1750
|||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 1709 CATCGGTGTTTGGTCCGAAACAAACGACATTAGACTTCCTCGGTTTAGGTAGAGCGGTTG 1768
Query 1751 GTAACGGAAATGGTCCAAGTAACGGACTATCTGCTCTAGTCGGAGGAAGCAGCGGCATCG 1810
|||||||||||||||||||||||||||||||| |||||||||||||| | | ||||||||
Sbjct 1769 GTAACGGAAATGGTCCAAGTAACGGACTATCTACTCTAGTCGGAGGAGGAACCGGCATCG 1828
Query 1811 ACGTGGCAACGACATTTGGATCAGGAGAGTTTTCAGGGAAAGACATTAGTAGAAGAAAAT 1870
| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1829 ATATGGCAACAACATTTGGATCAGGAGAGTTTTCAGGGAAAGACATTAGTAGAAGAAAAT 1888
Query 1871 CATAAGTAGAGTAA-TAGTTTGAGAAATTG-G-GGGTTTTAGATGTTCTTGTTCAATAGC 1927
|||||||||||||| | | || | ||| | ||||||||||||||||||||||||||
Sbjct 1889 CATAAGTAGAGTAAAT-GAATGTGT--TTGAGAGGGTTTTAGATGTTCTTGTTCAATAGG 1945
Query 1928 TTAGTGTGAG--TTTGAAA-CTTCCCTTTGAAAGAAAGGGTTCAATATTTAATATATAT 1983
|||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct 1946 TTAGTGTGAGAATTTGAAAACTTCCCTTTGAAAGAAAGGGTTCACTATTTAATATATAT 2004
> AT5G66730.1 | Symbols: | C2H2-like zinc finger protein | chr5:26641652-26644402
REVERSE LENGTH=2284
Length=2284
Score = 558 bits (302), Expect = 6e-158
Identities = 464/541 (86%), Gaps = 16/541 (3%)
Strand=Plus/Plus
Query 604 AAATCCACCGGAAAGAAGAAACGTAACCTCCCCGGCATGCCTGATCCAGA-GTCAGAAGT 662
|||||| ||| ||||||||||| || || || || |||||||||||||| | | |||||
Sbjct 601 AAATCCGTCGGGAAGAAGAAACGGAATCTTCCTGGAATGCCTGATCCAGACG-CTGAAGT 659
Query 663 TATAGCTTTATCACCAAAAACA-TTACTAGCAAC-AAACAGATTCGTATGTGAAATCTGT 720
|||||||| ||||| |||||| ||| | ||||| || | ||||||| || |||||||||
Sbjct 660 GATAGCTTTGTCACCTAAAACACTTA-TGGCAACGAATC-GATTCGTTTGCGAAATCTGT 717
Query 721 AACAAAGGGTTTCAAAGAGACCAAAATCTTCAACTTCATCGCCGTGGACACAAT-TTACC 779
|||||||| |||||| | ||||| |||||||| |||||||| ||||| |||||| || ||
Sbjct 718 AACAAAGGTTTTCAACGTGACCAGAATCTTCAGCTTCATCGTCGTGGTCACAATCTT-CC 776
Query 780 ATGGAAGCTTCGTCAGAAATCGAAC-AAAGAAGTGAAGAAAAAAGTCTATGTTTGTCCTG 838
|||||| ||||| |||| |||| || |||||||||| ||| || || |||||||||||||
Sbjct 777 ATGGAAACTTCGACAGAGATCG-ACTAAAGAAGTGAGGAAGAAGGTTTATGTTTGTCCTG 835
Query 839 AAGT-TAGTTGTGTTCATCATGACCCTTCACGTGCT-TTAGGAGATCTAACTGGAATCAA 896
| | | ||||||||||||||||||||||||||| || |||||||| |||||||||||
Sbjct 836 -TTTCTGGCTGTGTTCATCATGACCCTTCACGTGCTCTT-GGAGATCTTACTGGAATCAA 893
Query 897 GAAACACTTTTGTCGGAAACATGGTGAGAAGAAGTGGAAATGTGATAAATGTTCAAAGAA 956
||||||||||||||||||||| || |||||||| ||||| ||||| |||||||| |||||
Sbjct 894 GAAACACTTTTGTCGGAAACACGGCGAGAAGAAATGGAAGTGTGAGAAATGTTCTAAGAA 953
Query 957 ATACGCTGTTCAATCTGATTGGAAAGCTCATTCCAAGATTTGTGGTACTAAAGAGTATAA 1016
|| ||||||||||| ||||||||||||||||| ||||||||||| || || ||||||||
Sbjct 954 GTATGCTGTTCAATCAGATTGGAAAGCTCATTCGAAGATTTGTGGCACCAAGGAGTATAA 1013
Query 1017 ATGTGATTGTGGGACTCTGTTTTCTAGGAGGGATAGTTTTATAACGCATAGAGCATTTTG 1076
||| |||||||| ||||||||||||||||| ||||| ||||||||||||||||| |||||
Sbjct 1014 ATGCGATTGTGGAACTCTGTTTTCTAGGAGAGATAGCTTTATAACGCATAGAGCCTTTTG 1073
Query 1077 TGATGCTTTGGCTGAAGAAAGTGCGA-GAAGTCATAATCAGAGTAAGAAACAGAATCCAG 1135
|||||| ||||||||||| ||||||| ||| ||||| ||| || ||||||| ||||||
Sbjct 1074 TGATGCCTTGGCTGAAGAGAGTGCGAAGAA-TCATACTCAAAGCAAGAAACTTTATCCAG 1132
Query 1136 A 1136
|
Sbjct 1133 A 1133
Score = 78.7 bits (42), Expect = 2e-13
Identities = 44/45 (98%), Gaps = 0/45 (0%)
Strand=Plus/Plus
Query 311 AAAAAGAGATTTTTACGAAAAGCAGATTGACTGGTAGCTGAAGAA 355
|||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 355 AAAAGGAGATTTTTACGAAAAGCAGATTGACTGGTAGCTGAAGAA 399
> AT3G13810.2 | Symbols: IDD11 | indeterminate(ID)-domain 11 |
chr3:4544364-4547513 FORWARD LENGTH=1898
Length=1898
Score = 425 bits (230), Expect = 6e-118
Identities = 391/468 (84%), Gaps = 13/468 (3%)
Strand=Plus/Plus
Query 649 CCAGAGTCAGAAGTTATAGCTTTATCACCAAAAACATTACTAGCAACAAACAGATTCGTA 708
||||| |||||||| |||||| |||||||||||||| || | |||||||||||||||||
Sbjct 384 CCAGAATCAGAAGTGATAGCTCTATCACCAAAAACACTAATGGCAACAAACAGATTCGTG 443
Query 709 TGTGAAATCTGTAACAAAGGGTTTCAAAGAGACCAAAATCTTCAACTTCATCGCCGTGGA 768
||||||||||| |||||||| |||||||||||||| ||||| || |||||| | | ||
Sbjct 444 TGTGAAATCTGCAACAAAGGTTTTCAAAGAGACCAGAATCTACAGCTTCATAGAAGAGGT 503
Query 769 CACAATTTACCATGGAAGCTTCGTCAGAA-ATCGAACAAAGAAGTG--AA-GAAAAAAGT 824
|||||| | ||||||||||| || || ||| |||||||||||| || ||| |||||
Sbjct 504 CACAATCTGCCATGGAAGCTGAAACA-AAGATCCAACAAAGAAGTGATAAGGAAGAAAGT 562
Query 825 CTATGTTTGTCCTGAAGTTAGTTGTGTTCATCATGACCCTTC-ACGTGCTTTAGGAGATC 883
||||| ||||| |||| || ||||| || ||||| || || | | ||| | || || |
Sbjct 563 GTATGTATGTCCAGAAGCAAGCTGTGTCCACCATGATCCATCTA-GAGCTCTCGGTGA-C 620
Query 884 -TAACTGGAATCAAGAAACACTTT-TGTCGGAAACATGGTGAGAAGAAGTGGAAATGTGA 941
|||| ||||||||||| || ||| ||| | |||||||||||||||||||||||||||||
Sbjct 621 TTAACCGGAATCAAGAAGCA-TTTCTGTAGAAAACATGGTGAGAAGAAGTGGAAATGTGA 679
Query 942 TAAATGTTCAAAGAAATACGCTGTTCAATCTGATTGGAAAGCTCATTCCAAGATTTGTGG 1001
||| |||||||||||||| ||||||||||| ||||| || |||||||| |||| ||||||
Sbjct 680 TAAGTGTTCAAAGAAATATGCTGTTCAATCAGATTGCAAGGCTCATTCTAAGACTTGTGG 739
Query 1002 TACTAAAGAGTATAAATGTGATTGTGGGACTCTGTTTTCTAGGAGGGATAGTTTTATAAC 1061
|| ||||| || | |||||| ||||| ||||| |||||||||||||||||||| |||||
Sbjct 740 CACCAAAGAATACAGATGTGACTGTGGCACTCTCTTTTCTAGGAGGGATAGTTTCATAAC 799
Query 1062 GCATAGAGCATTTTGTGATGCTTTGGCTGAAGAAAGTGC--GAGAAGT 1107
||||||||||||||||| || ||||||||||| | ||| |||||||
Sbjct 800 TCATAGAGCATTTTGTGAAGCATTGGCTGAAGAGACTGCAAGAGAAGT 847
> AT5G44160.1 | Symbols: NUC | C2H2-like zinc finger protein |
chr5:17772941-17775686 FORWARD LENGTH=1724
Length=1724
Score = 246 bits (133), Expect = 5e-64
Identities = 365/472 (77%), Gaps = 36/472 (8%)
Strand=Plus/Plus
Query 643 CCTGATCCAG-AGTCAGAAGTTATAGCTTTATCACCAAAAACATT-ACTAGCAACAAACA 700
|||||||| | || | ||||| ||||||||||| || | || || | | || || |||
Sbjct 286 CCTGATCCGGAAG-CTGAAGTGATAGCTTTATCCCCCACGACCTTGA-TGGCTACGAACC 343
Query 701 GATTCGTATGTGAAATCTGTAACAAAGGGTTT-CAAAGAGACCAAAATCTT-CAACTTCA 758
| ||| ||||||| | ||| |||| ||||| |||||||||||||| ||| || |||||
Sbjct 344 GGTTCCTATGTGAGGTATGTGGCAAA-GGTTTCCAAAGAGACCAAAA-CTTACAGCTTCA 401
Query 759 TCGCCGTGGACACAAT-TTACCATGGAAGCTTCG--TCAGA-AATCGAA-CAAAGAAGTG 813
||| || ||||| ||| || ||||||||| || | |||| | | || ||||||||||
Sbjct 402 TCGGCGAGGACATAATCTT-CCATGGAAG-TT-GAAGCAGAGGA-C-AAGCAAAGAAGTG 456
Query 814 AAGAAAA-AAGTCTATGTTTG-TCC-TGAAGTTAGTTGTGTTCATCATGAC-CCTTC-AC 868
|||||| ||||| ||||| || |||| | ||||| || ||| || || || |
Sbjct 457 -AGAAAACGTGTCTACGTTTGCCCCGAGAAG--ACATGTGTCCACCATCACTCC-TCTA- 511
Query 869 GTGCTTTAGGAGATCTAACTGGAATCAAGAAA-CACTTTTGTCGGAAACATGGTGAGAAG 927
| ||| |||| ||||| ||||||||||| ||| || ||||| |||||||| || ||||||
Sbjct 512 GAGCTCTAGGCGATCTCACTGGAATCAA-AAAGCATTTTTGCCGGAAACACGGGGAGAAG 570
Query 928 AAGTGGAAATGTGATAAATGTTCAAAGAAATACGCTGTTCAATCTGATTGGAAAGCTCAT 987
||||||| || || |||||| | |||| |||||| || |||||||||||||||||||||
Sbjct 571 AAGTGGACGTGCGAGAAATGTGCTAAGAGATACGCAGTCCAATCTGATTGGAAAGCTCAT 630
Query 988 TCCAAGATTTGTGGTACTAAAGAGTATAAATGTGATTGTGGGACTCTGTTTTCT-A-GGA 1045
||||||| ||||||||||| |||||| || |||||||| || | |||||| | ||
Sbjct 631 TCCAAGACTTGTGGTACTAGAGAGTACCGTTGCGATTGTGGCAC-CA-TTTTCTCAAGGC 688
Query 1046 GGGATAGTTTTATAACGCATAGAGCATTT-TGTGATGCTTTGGCTGAAGAAA 1096
| || || ||||| || |||||||| ||| || ||||| || || |||||||
Sbjct 689 GAGACAGCTTTATCACTCATAGAGC-TTTCTGCGATGCCTTAGCGGAAGAAA 739
> AT1G14580.1 | Symbols: | C2H2-like zinc finger protein | chr1:4989563-4992732
FORWARD LENGTH=1950
Length=1950
Score = 230 bits (124), Expect = 5e-59
Identities = 341/445 (77%), Gaps = 18/445 (4%)
Strand=Plus/Plus
Query 647 ATCCAGAGT-CAGAAGTTATAGCTTTATCACCAAAAAC-ATTACTAGCAACAAACAGATT 704
||||||| | | ||||| ||||| ||||| ||||| || | || | || || ||||| ||
Sbjct 444 ATCCAGA-TGCTGAAGTGATAGCGTTATCGCCAAAGACGA-TAATGGCGACGAACAGGTT 501
Query 705 CGTATGTGAAATCTGTAACAAAGGGTTTCAAAGAGACCAAAATCTTCAACTTCATC-GCC 763
| |||||||| | || ||||||||||| || || || || ||||| || || || | |
Sbjct 502 CCTATGTGAAGTGTGCAACAAAGGGTTCCAGAGGGAACAGAATCTGCAGCTCCA-CAGGA 560
Query 764 GTGGACACAA-TTTACCATGGAAGCTTCGTCAGAAA-TCGAACAAAGAAGTGAAGAAAAA 821
| |||||||| || ||||||||||| || ||| || |||||||| |||| || ||
Sbjct 561 GGGGACACAACCTT-CCATGGAAGCTGAAACA-AAAGTCCAACAAAGAGGTGAGGAGGAA 618
Query 822 AGTCTATGTTTGTCCTGAAG--TTAGTTGTGTTCATCATGACCCTTCACGTGCTTTAGGA 879
|| || ||||||| | || | | || || || |||||||| |||||||| | |||
Sbjct 619 GGTGTACCTTTGTCC-GGAGCCCTCG-TGCGTCCACCATGACCCCGCACGTGCTCTCGGA 676
Query 880 GATCTAACTGGAATCAAGAAACACTT-TTGTCGGAAACATGGTGAGAAGAAGTGGAAATG 938
|| || || ||||||||||| || || | |||||| || |||||||| |||||||| ||
Sbjct 677 GACCTCACCGGAATCAAGAAGCA-TTACTATCGGAAGCACGGTGAGAAAAAGTGGAAGTG 735
Query 939 TGATAAATGTTCAAAGAAATACGCTGTTCAATCTGATTGGAAAGCTCATTCCAAGATTTG 998
||||| || || ||| ||||||||||||||||||||||||||||| || |||| ||
Sbjct 736 CGATAAGTGCTCTAAGCGTTACGCTGTTCAATCTGATTGGAAAGCTCACTCTAAGACCTG 795
Query 999 TGGTACTAAAGAGTATAAATGTGATTGTGGGACTC-TGTTTTCTAGGAGGGATAGTTTTA 1057
|||||| ||||||||| |||||| ||||| || | | || |||||||| || |||| |
Sbjct 796 TGGTACCAAAGAGTATCGATGTGACTGTGGTAC-CATCTTCTCTAGGAGAGACAGTTACA 854
Query 1058 TAACGCATAGAGCATTTTGTGATGC 1082
| || || || ||||| ||||||||
Sbjct 855 TCACCCACAGGGCATTCTGTGATGC 879
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 98242466565
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5