BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg485462 Length=1210 Score E Sequences producing significant alignments: (Bits) Value AT3G51090.1 | Symbols: | Protein of unknown function (DUF1640)... 1735 0.0 > AT3G51090.1 | Symbols: | Protein of unknown function (DUF1640) | chr3:18977988-18980003 REVERSE LENGTH=1251 Length=1251 Score = 1735 bits (939), Expect = 0.0 Identities = 1153/1247 (92%), Gaps = 51/1247 (4%) Strand=Plus/Plus Query 1 AAAGACTCACGCTTTCTCTACCATCGTCGTCCGTCTGTTTCATTTGATGGTGCTGAGACG 60 |||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct 1 AAAGACGCACGCTTTCTCTATCATCGTCGTCCGTCTGTTTCATTTGATGGTGCGGAGACG 60 Query 61 TCTAAGCGATTTCCATGGATGACACAACCTTCATTAGATCAAATCC-CACCAAACCCATC 119 ||||||||||||||||||||||||| |||||||| ||| | ||||| ||||||||||||| Sbjct 61 TCTAAGCGATTTCCATGGATGACACCACCTTCATAAGAAC-AATCCTCACCAAACCCATC 119 Query 120 TTCAAAATTTTCTTCTTTTGA--A-CATTTGCATGCTTACCCGATTGGGAAACTC-TTGT 175 |||||| |||||||||||||| | || ||||||||||||||||||||||||||| |||| Sbjct 120 TTCAAATTTTTCTTCTTTTGACCACCA-TTGCATGCTTACCCGATTGGGAAACTCTTTGT 178 Query 176 TATCCTTATTGATCTTCTTCCAACAGCGATTTCCCGATCCGAAATTTT--G--G---G-- 226 |||||||||||||||||||||||| ||||||||||||||| ||||||| | | | Sbjct 179 TATCCTTATTGATCTTCTTCCAACGGCGATTTCCCGATCC-AAATTTTGGGTTGATTGAA 237 Query 227 TTCAAAGTTTCCATTTTTAC--A--AA--TC----AA--TTTCATC--TTTTTGATGGCT 272 |||||||||||| ||||||| | || || || ||||||| ||||| |||||| Sbjct 238 TTCAAAGTTTCCGTTTTTACAAACCAATTTCGGGAAAGTTTTCATCTTTTTTTTATGGCT 297 Query 273 GCTTACGCGAATTATCTCCGACTCGCACGTCTTGGAACAAGTTCATCATCAGGTGTAAAC 332 ||||||||||||||||||||||||||||| |||||| || || |||||||||||| Sbjct 298 GCTTACGCGAATTATCTCCGACTCGCACGACTTGGAGGAA---CAAGTTCAGGTGTAAAC 354 Query 333 CTGTCGACTCTCAGATCAATCGGTTATTCAAATCCAACATTTGACAAGACTCACGAGATT 392 |||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||| || Sbjct 355 CTGTCGACTCTCAGATCATTCGGTTATTCAAATCCAGCATTTGACAAGACTCAAGAGTTT 414 Query 393 CGTTCCTCTTCTTCTTCATCGTTAGTATCACATTCTTCTTCGTTCAGACAATTCCACGCC 452 || ||| ||||||||||||||||||| || | ||||||||||||||||||||||||| Sbjct 415 CG---CTCCTCTTCTTCATCGTTAGTAT--CA-TATTCTTCGTTCAGACAATTCCACGCC 468 Query 453 AGATTCATCTCTCAACTTATCAAAACCAATGGGAAACGTTTGTTTCTTGTCGATACACTC 512 |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 469 AGATTCATATCTCAGCTTATCAAAACCAATGGGAAACGTTTGTTTCTTGTCGATACACTA 528 Query 513 GCTTTGGTTAGGAGCTTAGAAGCACAAGGCCTGCCTTCGAAGCAAGCCGAGGCAATAACC 572 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 529 GCTTTGGTTAGGAGCTTAGAAGCACAAGGCCTGCCTTCAAAGCAAGCCGAGGCAATAACC 588 Query 573 GGTGCTATAACTGAAGTTCTTAACGATAGCTTAGGAGTTGTTTCACAGTTGGTTGTCTCC 632 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 589 GGTGCTATAACTGAAGTTCTTAACGATAGCTTAGGAGTTGTTTCACAGTTAGTTGTCTCC 648 Query 633 AAGGGAGAGATGCAGAAAGCTGAAATGACACAGGAATCAAACTTGTCCAAGTTCAAAAGT 692 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct 649 AAGGGAGAGATGCAGAAAGCTGAAATGACGCAGGAATCAAACTTATCCAAGTTCAAAAGT 708 Query 693 GAAATTAACAGTTCACTGGACCACCATTTCTCTTTGCTGCAACACGAGAATGAGAAACTC 752 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 709 GAAATTAATAGTTCACTGGACCACCATTTCTCTTTGCTGCAACACGAGAATGAGAAACTC 768 Query 753 CGCAATGACATAGAGCGAATCCGCTCTGATATAAGACACGAGATCGACAAAGTCACAGCA 812 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 769 CGCAATGACATAGAGCGAATCCGCTCTGATATAAGACACGAGATCGATAAAGTCACAGCA 828 Query 813 GGACAACGGTTGGATCTGAATCTTGAAAAAGGGAGGATAAGAGATGAGTTACAAAATCAA 872 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 829 GGACAACGGTTGGACCTGAATCTTGAAAAAGGGAGGATAAGAGATGAGTTACAAAATCAA 888 Query 873 AACGCAGAAACCTCTAACCTTACAAACAAACTTGACCGTGAGATTCACACTTTGAGAGCT 932 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 889 AACGGAGAAACCTCTAACCTTACAAACAAACTTGACCGTGAGATTCACACTTTGAGAGCT 948 Query 933 CAGTTAGAAGCAGCCAAGTATGAGGTGATCAAGTACTGTATTGGTACACTTGTCTCCATC 992 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 949 CAGTTAGAAGCAGCCAAGTATGAGGTGATCAAGTACTGTATTGGTACTCTTGTCTCCATC 1008 Query 993 TCAGCAGTTGGTCTCGCTGTCCTCCGGATCGTCATGTAACTCCATCCGACGGTGCCGGTT 1052 ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1009 TCAGCCGTTGGTCTCGCTGTCCTCCGGATCGTCATGTAACTCCATCTGACGGTGCCGGTT 1068 Query 1053 TTAA-GACCAACTCATCA-TCTTCCCTGtttttttAATTACGGGATGAAA-TCTTTGGTC 1109 |||| ||||||||||||| |||||||||| |||| ||||||||||||||| |||| |||| Sbjct 1069 TTAAAGACCAACTCATCAATCTTCCCTGTCTTTT-AATTACGGGATGAAAATCTT-GGTC 1126 Query 1110 TTGTTAATTAT-T---CGTATCTTTAATGTAATTGTATTTAC--TTTTTTGTGTGAAAGA 1163 |||||||||| | ||||| |||||||||||||||||| | |||||| ||||||||| Sbjct 1127 ATGTTAATTATATATTCGTATGTTTAATGTAATTGTATTTCCCCTTTTTTATGTGAAAGA 1186 Query 1164 AATAAAGAATCACCAATCTAGTAAATTTGAACCCTTCATGTATATGA 1210 |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct 1187 AATAAAGAATAACCAGTCTAGTAAATTTGAACCCTTCATGTATATGA 1233 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 59437445280 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5