BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg485493 Length=792 Score E Sequences producing significant alignments: (Bits) Value AT3G51410.1 | Symbols: | Arabidopsis protein of unknown functi... 699 0.0 > AT3G51410.1 | Symbols: | Arabidopsis protein of unknown function (DUF241) | chr3:19081257-19082212 REVERSE LENGTH=956 Length=956 Score = 699 bits (378), Expect = 0.0 Identities = 428/452 (95%), Gaps = 4/452 (1%) Strand=Plus/Plus Query 1 TTTTCTTCAGCAGAATCAAGAAACATGGCATTCCCTGAAACCAAACTTCAAATGCCCA-T 59 |||||||||||||||| ||||||||||||||| || ||||||||||| |||||| ||| | Sbjct 65 TTTTCTTCAGCAGAATTAAGAAACATGGCATTTCCAGAAACCAAACTCCAAATG-CCAGT 123 Query 60 TAGATCTATAAGTCTTCCATCAAGAATCCACCATCCTTCTGCTAAGTTTCAAGCTGCTCT 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 124 TAGATCTATAAGTCTTCCATCAAGAATCCACCATCCTTCTGCTAAGTTTCAAGCTGCTCT 183 Query 120 CTCTCAGATTCATCTTTTCCAAAACTCATCTGATTCACAATCTCTTCAAGCCTCATTACT 179 ||||||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct 184 CTCTCAGATTCATCTCTTCCAAAACTCATCTGATTCTCAATCTCTTCACGCCTCGTTACT 243 Query 180 CAACCTCTCTGAGCTTTACCATTCCCTTCACCAACTCAATCACTCTCTTCCCACAGCTCA 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 244 CAACCTCTCTGAGCTTTACCATTCCCTTCACCAACTCAATCACTCTCTTCCCACAGCTCA 303 Query 240 AGCTGAACATTCTCTTGACGTGTCCGCCACGTTACTAGACTCTTGCGACGCAGCGAGAAA 299 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 304 AGCTGAACATTCTCTTGACGTGTCAGCCACGTTACTAGACTCTTGCGACGCAGCGAGAAA 363 Query 300 CCTAATCCTAACACTCAGAGAGCATCTCCTCAATCTTCAGTCTGCGCTT-AGGAGAAAGG 358 |||| | || || ||||||||||||||||| |||||||||||||| || || ||||| | Sbjct 364 CCTAGTTCTCACTCTCAGAGAGCATCTCCTTAATCTTCAGTCTGCA-TTGAGAAGAAAAG 422 Query 359 ATAAATCCATGGAAGTTCAGATCAAAGAGTACTTTTCCTTCAGGAAAAAGATCAAGAAAG 418 | |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct 423 ACAAATCCATGGAAGTTCAGATCAAAGAGTACTTTTCCTTTAGGAAGAAGATCAAGAAAG 482 Query 419 AGACTAACAAGCTTCTTCTTGGCCTCAAGAAG 450 |||||||||||||||||||||||||||||||| Sbjct 483 AGACTAACAAGCTTCTTCTTGGCCTCAAGAAG 514 Score = 538 bits (291), Expect = 3e-152 Identities = 326/343 (95%), Gaps = 2/343 (1%) Strand=Plus/Plus Query 451 GTCTCTATCTTCCGCTCTCTTTTCATGTTCCTGTCGACAACATCGACCGTAAAGACAAAG 510 ||||| ||||||||||||||||||||||||||||| |||||||| || | ||||||||| Sbjct 548 GTCTCCATCTTCCGCTCTCTTTTCATGTTCCTGTCCACAACATCAACAATGAAGACAAAG 607 Query 511 ACATGTTCTCTCAAATTCGTCTCCAAGCTGATCAGTGGTGGTCACCGATCGTCGTCGTCG 570 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct 608 ACATGTTCTCTCAAATTCGTCTCCAGGCTGATCAGTGGTGGTCACCGATCGTCATCGTCG 667 Query 571 ATAATGAGCGAGTTGCAGAATGTT-GATGTGGTTCTACGTTCAGATGGGGATAACTCCAA 629 |||||||||||||||||||| || |||| ||||||||||||||||||||||||||||| Sbjct 668 ATAATGAGCGAGTTGCAGAA-CTTGGATGCAGTTCTACGTTCAGATGGGGATAACTCCAA 726 Query 630 GGAAATGAAGAAGATGTTAGAGAGATTAGAGGAAAGAACAGAGGAACTTGAGGCTGCACT 689 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 727 GGAAATTAAGAAGATGTTAGAGAGATTAGAGGAAAGAACAGAGGAACTTGAGACTGCACT 786 Query 690 TGATTCTCTTTTCAAGTCTCTTGTCCAATATAGAGTTTATTTGCTCAACATTCTTACAAC 749 |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct 787 TGATTCTCTTTTCAAGTCACTTGTCCAATATAGAGTTTATTTGCTTAACATTCTTACAAC 846 Query 750 ACACTCTTAGTTTAGTTAGTCTCTAATTGTACACAAAACATAT 792 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 847 ACACTCTTAGTTTAGTTAGTCTCTAATTGTACACAAAACATAT 889 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 38529590749 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5