BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg485497
Length=2162
Score E
Sequences producing significant alignments: (Bits) Value
AT3G51460.1 | Symbols: RHD4 | Phosphoinositide phosphatase fami... 3445 0.0
AT5G66020.1 | Symbols: IBS2, ATSAC1B, ATSAC6, SACIB | Phosphoin... 1840 0.0
> AT3G51460.1 | Symbols: RHD4 | Phosphoinositide phosphatase family
protein | chr3:19092518-19097353 FORWARD LENGTH=2379
Length=2379
Score = 3445 bits (1865), Expect = 0.0
Identities = 2071/2168 (96%), Gaps = 24/2168 (1%)
Strand=Plus/Plus
Query 1 GGTGGTCGTCCACTAATTAGATTC--AGAGTCAAGACTTGATCTAACGATTAACGCAAAA 58
|||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||
Sbjct 227 GGTGGTCGTCCACTAATTAGATTCAGAGAGTCAGGACTTGATCCAACGATTAACGCAAAA 286
Query 59 TCATTTGCACGTTCTACGCAACTCCATAATTTCAATTCTTCTCGACGTTTCACGGCGAAG 118
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 287 TCATTTGCACGTTCTACGCAACTCCATAATTTCAATTCCTCTCGACGTTTCACGGCGAAG 346
Query 119 CTTCAGATCTACTTTTCCCCAGCTCAGTATGGAGACGGCTGATTCTCGGAACAAATTGCA 178
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 347 CTTCAGATCTACTTTTCCCCAGCTCAGTATGGAGACGGTTGATTCTCGGAACAAATTGCA 406
Query 179 TTCCCATTTACGTTTATGGGAATTCCCCGATCAGTACATCATCGAGCCAGCTGATGGTTC 238
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 407 TTCCCGGTTACGTTTATGGGAATTCCCCGATCAGTACATCATCGAGCCAGCTGATGGCTC 466
Query 239 AGGCGCTTCATGTTTGGATATTAGTCGTGTTGATGCTTCCATGAAGCTCATCGATCATGT 298
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 467 AGGCTCTTCATGTTTGGATATTAGTCGTGTTGATGCTTCCATGAAGCTCATCGATCAAGT 526
Query 299 CCCAGAAAGCAATTCCGTGCGAGTCCCTAAAATCCGTTCCATTTTTGGTGTGGTTGGGAT 358
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 527 CCCAGAAAGCAATTCCGTGCGTGTCCCTAAAATCCGTTCCATTTTTGGTGTGGTTGGGAT 586
Query 359 GTTGAAGCTCCTTGCAGGATCATACTTGGTGGTTGTAACCGAGAGTGAACGTGTTGGATC 418
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 587 GTTGAAGCTCCTTGCAGGATCATACTTGGTGGTTGTAACTGAGAGTGAACGTGTTGGATC 646
Query 419 GTTTCTGGGCCATCCTATATTCAAAATTACAACGCTTAAGGTTCTTCCTTGTGATCATTC 478
||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 647 GTTTCTGGGGCATCCTATATTCAAAGTTACAACGCTTAAGGTTCTTCCTTGTGATCATTC 706
Query 479 ACTTCAAAACTCACCTGAAGAACAGAAAAAGATGGAGACTGAGTTCTCCAAGCTGC-TGA 537
|||| ||||||| |||||||||||||||||||||||||| |||||||||||||| | | |
Sbjct 707 ACTTAAAAACTCGCCTGAAGAACAGAAAAAGATGGAGACCGAGTTCTCCAAGCT-CTTAA 765
Query 538 GTGTCGCAGAAAAGACAACTGGTCTCTATTTCTCATATGAAGTTAACTTAACACTGAGCT 597
|||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 766 GTGTAGCAGAAAAGACAACTGGTCTCTATTTCTCATATGAAGTTAACTTAACATTGAGCT 825
Query 598 CACAACGGTTGCATGATTTGGGTGATGAGTCTAAGTCACTTCCTCTGTGGAGACAGGCTG 657
||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 826 CACAACGCTTGCATGAAATGGGTGATGAGTCTAAGTCACTTCCTCTGTGGAGACAGGCTG 885
Query 658 AGCCGAGGTTTCTTTGGAACAATTACATGTTGGAAGTTCTAATCGATAATAAGCTTGATC 717
| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 886 AACCGAGGTTTCTTTGGAACAATTACATGTTGGAAGTTCTCATCGATAATAAGCTTGATC 945
Query 718 AGTTCTTGCTTCCAGTAATTCAAGGGAATATCCTTTGTTATCAGTTCTTTGAAACAGCCA 777
|||||||||||||||||||||||||| | | || | || || ||||||||||||||
Sbjct 946 AGTTCTTGCTTCCAGTAATTCAAGGG---A-GC-TT-TAAT-AG--CTTTGAAACAGCCA 996
Query 778 TTGGAAGAGATATTGTTGACATTACTCTGATTGCTAGGAGATGCACTAGGAGAAACGGTA 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 997 TTGGAAGAGATATTGTTGACATTACTCTGATTGCTAGGAGATGCACTAGGAGAAACGGTA 1056
Query 838 CACGTATGTGGCGAAGAGGAGCTGATCTTGATGGCTATGTTGCTAATTTTGTGGAGACTG 897
||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1057 CACGTATGTGGAGAAGAGGAGCGGATCTTGATGGCTATGTTGCTAATTTTGTGGAGACTG 1116
Query 898 AGCAAATTGTACAAATGAATGGATATTCTTCATCATTTGTGCAGGTCAGGGGATCCATAC 957
||||||||||||| |||||||| ||| | ||||||||||| |||||||| |||||||| |
Sbjct 1117 AGCAAATTGTACAGATGAATGGGTATACGTCATCATTTGTTCAGGTCAGAGGATCCATGC 1176
Query 958 CTTTTATGTGGGAGCAAGTTGTAGATCTAACTTACAAACCCAAGTTTGAAATTGTCCAAC 1017
|||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 1177 CTTTTATGTGGGAGCAGGTTGTAGATCTGACTTACAAGCCCAAGTTTGAAATTGTCCAAC 1236
Query 1018 CTGAAGAAGCTACACGGATAGCTGAGCGTCACTTTTTGGACCTTAGGAAAAAATATGGAT 1077
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1237 CTGAAGAAGCTAAACGGATAGCTGAGCGTCACTTTTTGGACCTTAGGAAAAAATATGGAT 1296
Query 1078 CAGTTTTGGCAGTTGACCTTGTTAATAAGCATGGCGGTGAGGGGCGCTTAAGCGAGAAGT 1137
|||||||||||||||| || ||||| ||||| |||||||||||||||||| |||||||||
Sbjct 1297 CAGTTTTGGCAGTTGATCTCGTTAACAAGCAAGGCGGTGAGGGGCGCTTATGCGAGAAGT 1356
Query 1138 ATGCTACTGTTATGCAACACATTGCTGGGGATGATATAAGATACCTGCACTTCGATTTCC 1197
||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||
Sbjct 1357 ATGCTACTGTTATGCAACACATTACTGGGGATGATATAAGGTACCTGCACTTTGATTTCC 1416
Query 1198 ATCAAGTTTGTGGGCATATTCATTTTGAGCGCTTATCAATTCTTTACGAGCAGATCGAGG 1257
||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1417 ATCAAATTTGTGGGCATATTCATTTTGAGCGCTTATCAATTCTGTACGAGCAGATCGAGG 1476
Query 1258 GGTTTCTCGaaaaaaaTGGGTACTTTCTGTTGAATGAAAAGGGTGAGAAAATGAAGGACC 1317
| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1477 GTTTTCTCGAAAAGAATGGGTACTTTCTGTTGAATGAAAAGGGTGAGAAAATGAAGGAGC 1536
Query 1318 AGCTTGGTGTTGTCCGATCAAACTGCATAGATTGCTTAGACCGTACAAATGTCACCCAGA 1377
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1537 AGCTTGGTGTTGTCCGATCAAACTGCATAGATTGCTTAGACCGTACAAATGTTACCCAGA 1596
Query 1378 GCATGATAGGTCGAAAAATGTTAGAACTTCAACTCAAAAGGATTGGAGTTTTTGGCGCTG 1437
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1597 GCATGATAGGTCGAAAGATGTTAGAAGTTCAACTCAAAAGGATTGGAGTTTTTGGCGCTG 1656
Query 1438 AAGAAACCATAAGCTCACATCTGAATTTTGACGAACACTATAAAATATTATGGGCTAATC 1497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1657 AAGAAACCATAAGCTCACATCTGAATTTTGACGAACACTATAAAATATTATGGGCTAATC 1716
Query 1498 ATGGTGATGAAATCAGCATTCAGTACTCTGGTACTCCTGCACTTAAAGGAGATTTCGTTA 1557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1717 ATGGTGATGAAATCAGCATTCAGTACTCTGGTACTCCTGCACTTAAAGGAGATTTCGTTA 1776
Query 1558 GGTATGGGCATCGGACTGCCCATGGTGTCCTTAAAGATGGTTGGAGCTCCCTCAGACGCT 1617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GGTATGGGCATCGGACTGCCCATGGTGTCCTTAAAGATGGTTGGAGCTCCCTCAGACGCT 1836
Query 1618 ATTACCTGAATAACTTTGCTGATGGAACTAAGCAGGATGCAATTGATCTCCTGCAAGGGC 1677
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1837 ATTACCTGAATAACTTTGCTGATGGAACTAAGCAGGATGCAATTGATCTCTTGCAAGGGC 1896
Query 1678 ACTACATAGTTGCTGTGAGCCGAGACATGGCTCCTGTACCTCAAAGGGGAGGCCTTGAGG 1737
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1897 ACTACATAGTTGCTGTGAGCCGAGACATGGCTCCTGTACCTCAAAAGGGAGGCCTTGAGG 1956
Query 1738 CTGTAGCCAACTTCCCAGTGGCATTGTTCGTGGTTCTGATGAGTTTCTGGTTTGCAACAG 1797
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1957 CTGTAGCCAACTTCCCAGTGGCATTGTTCGTGGTTCTGATGAGTTTCTGGTTTGCAACAA 2016
Query 1798 TGTCTCTAAAACAAGCTGGGAGTGATTATAAGCATAAGCACTTATTCTTCTCATTGTTGT 1857
|||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2017 TGTCTCTAAAACAAACTGGGAGTGATTATAAGCATAAGCACTTGTTCTTCTCATTGTTGT 2076
Query 1858 GGACGGGAATTTGTGTGGGCATGGCTGCACTGGTGAGGGCAAATGGCCGGATCTTCTGCA 1917
||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||| |
Sbjct 2077 GGACGGGAATTTGCGTGGGCATGGCTGCACTGGTGAGGGCCAATGGCAGGATCTTCTGTA 2136
Query 1918 ACCGGCCTCGTCTGCACAAGCCCAGAGGCTGATTCATTTTATCCACTCGTGTGATCA-TT 1976
|||| |||||||||||||||||||||||||||||||||| | ||| ||||| ||
Sbjct 2137 ACCGACCTCGTCTGCACAAGCCCAGAGGCTGATTCATTT---C-----GTGAGATCAATT 2188
Query 1977 AATTAAAGACATGGAACTCAAGTCGGAGCCAAAAGTTTTCTCCCTTTGATTGTTT-ATTT 2035
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||
Sbjct 2189 AATTAAAGACATGGAACTCAAGTCGGAGACAAAAGTTTTCTCCCTTCGATTGTTTTATTT 2248
Query 2036 TATTGTATCAATGTTGGACCTTGTGACACCATCTAGAGGCAAATGTCTCACGTTTGGATC 2095
||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct 2249 TATTGTATCAAAATTGGACCTTGTGACACCATCTAGAGGCAATTGTCTCAGGTTTGGATC 2308
Query 2096 CCTCATGATTTAATACTCCCACAGCCATCAA-TGACTCGATACAGTTACACATCTTTCTT 2154
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2309 CCTCATGATTTAATACTCCCACAGCCATCAAATGACTCGATACAGTTACACATCTTTCTT 2368
Query 2155 CTTGTTCA 2162
| ||||||
Sbjct 2369 CATGTTCA 2376
> AT5G66020.1 | Symbols: IBS2, ATSAC1B, ATSAC6, SACIB | Phosphoinositide
phosphatase family protein | chr5:26401193-26404691
REVERSE LENGTH=1782
Length=1782
Score = 1840 bits (996), Expect = 0.0
Identities = 1523/1774 (86%), Gaps = 50/1774 (3%)
Strand=Plus/Plus
Query 189 CGTTTATGGGAATTCCCCGATCAGTACATCATCGAGCCAGCTGATGGTTCAGGCGCTTCA 248
||||| ||||||||||| ||||||||| ||||||||||| | |||||||| |||||||
Sbjct 34 CGTTTGTGGGAATTCCCTGATCAGTACGTCATCGAGCCAACCGATGGTTCCTCCGCTTCA 93
Query 249 TGTTTGGATATTAGTCGTGTTGA-TGCTTCCATGAAGCTCATCGATCATGTCCCAGAAAG 307
|||||||||||||||||| |||| || |||||||||||||| ||||| || ||||| |
Sbjct 94 TGTTTGGATATTAGTCGTCTTGACGGC-TCCATGAAGCTCATTGATCAAGTAGCAGAATG 152
Query 308 CAATTCCGTGCGAGTCCCTAAAATCCGTTCCATTTTTGGTGTGGTTGGGATGTTGAAGCT 367
||| || |||| |||||||||||||| |||||||| ||||||||||||||| |||||||
Sbjct 153 CAACTCTTTGCGTGTCCCTAAAATCCGCTCCATTTTCGGTGTGGTTGGGATGCTGAAGCT 212
Query 368 CCTTGCAGGATCATACTTGGTGGTTGTAACCGAGAGTGAA-CGTGTTGGATCGTTTCTGG 426
||| |||||||| ||||| || ||||| || ||||| ||| | |||||| |||||| |||
Sbjct 213 CCTGGCAGGATCCTACTTAGTAGTTGTGACAGAGAGCGAATC-TGTTGGCTCGTTTTTGG 271
Query 427 GCCATCCTATATTCAAAATTACA-ACGCTTAAGGTTCTTCCTTGTGATCATTCACTTCAA 485
| |||||||||| |||||||| | |||| ||| ||||||| ||||||||||||||| ||
Sbjct 272 GACATCCTATATACAAAATTA-ATTCGCTCAAGTTTCTTCCATGTGATCATTCACTTGAA 330
Query 486 AACTCACCTGAAGAACAGAAAAAGATGGAGACTGA-G--TTCTCCAAGCTGCTGAGTGTC 542
||| | | ||||||||||||||||||||||||||| | | ||| | |||||| ||||||
Sbjct 331 AACCCGCATGAAGAACAGAAAAAGATGGAGACTGATGACTACTCTAGGCTGCTAAGTGTC 390
Query 543 GCAGAAAAGACAACTGGTCTCTATTTCTCATATGAAGTTAACTTAACACTGAGCT-CACA 601
|| || | ||||||||||||||| |||||||||||| ||||||| || || | || ||||
Sbjct 391 GCTGAGAGGACAACTGGTCTCTACTTCTCATATGAAATTAACTTGACTCTCA-CTGCACA 449
Query 602 ACGGTTGCATGATTTGGGTGATGAGTCTAAGTCACTTCCTCTGTGGAGACAGGCTGAGCC 661
|| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct 450 GCGCTTGCATGATTTGGGTGATGAGTCTAAGTTGCTTCCTTTGTGGAGACAGGCTGAGCC 509
Query 662 GAGGTTTCTTTGGAACAATTACATGTTGGAAGTTCTAATCGATAATAAGCTTGATCAGTT 721
|| ||||| ||||||||||| ||||| |||||||| |||||||||||||||||||||||
Sbjct 510 TAGATTTCTATGGAACAATTATATGTTAGAAGTTCTTATCGATAATAAGCTTGATCAGTT 569
Query 722 CTTGCTTCCAGTAATTCAAGGGAATATCCTTTGTTATCAGTTCTTTGAAACAGCCATTGG 781
||||||||| |||||||||||| | ||| | || || | ||| |||||||||||||
Sbjct 570 CTTGCTTCCTGTAATTCAAGGG---A--GTTT-TCAT-AG-T-TTTCAAACAGCCATTGG 620
Query 782 AAGAGATATTGTTGACATTACTCTGATTGCTAGGAGATGCACTAGGAGAAACGGTACACG 841
||||||||| |||||||||||||||||||||||||| ||| |||| ||||| ||||||||
Sbjct 621 AAGAGATATCGTTGACATTACTCTGATTGCTAGGAGGTGCTCTAGAAGAAATGGTACACG 680
Query 842 TATGTGGCGAAGAGGAGCTGATCTTGATGGCTATGTTGCTAATTTTGTGGAGACTGAGCA 901
||||||||| |||||||||| | |||||| |||||||||||||||||||||||||||||
Sbjct 681 CATGTGGCGACGAGGAGCTGACCCTGATGGTTATGTTGCTAATTTTGTGGAGACTGAGCA 740
Query 902 AATTGTACAAATGAATGGATATTCTTCATCATTTGTGCAGGTCAGGGGATCCATACCTTT 961
|||||||| ||||| ||||| | ||||| ||||| ||| | || |||||||| |||||
Sbjct 741 AATTGTACGCATGAACGGATACACATCATCCTTTGTTCAGATTAGAGGATCCATGCCTTT 800
Query 962 TATGTGGGAGCAAGTTGTAGATCTAACTTACAAACCCAAGTTTGAAATTGTCCAACCTGA 1021
||||||||||||| |||||||||| || ||||| ||||||||||| ||||||||||||||
Sbjct 801 TATGTGGGAGCAAATTGTAGATCTGACCTACAAGCCCAAGTTTGAGATTGTCCAACCTGA 860
Query 1022 AGAAGCTAC-ACGGATAGCTGAGCGTCACTTTTTGGACCTTA-GGAAAAAATATGGATCA 1079
||||||| | | |||||||||||||||||||| | ||| ||| |||||||||||||||||
Sbjct 861 AGAAGCTGCGA-GGATAGCTGAGCGTCACTTTCTCGAC-TTAAGGAAAAAATATGGATCA 918
Query 1080 GTTTTGGCAGTTGACCTTGTTAATAAGCATGGCGGTGAGGGGCGCTTAAGCGAGAAGTAT 1139
|||||||| ||||| ||||| ||||||||||| ||||| |||||| |||| |||| || |
Sbjct 919 GTTTTGGCGGTTGATCTTGTCAATAAGCATGGAGGTGAAGGGCGCCTAAGTGAGAGGTTT 978
Query 1140 GCTAC-TGTTATGCAACACATTGCTGGGGATGATATAAGATACCTGCACTTCGATTTCCA 1198
|| | || |||||| ||||| |||| |||||| |||||||||||||||| ||||||||
Sbjct 979 GC-AGGTGCTATGCAGCACATCACTGGTGATGATGTAAGATACCTGCACTTTGATTTCCA 1037
Query 1199 TCA-AGTTTGTGGGCATATTCATTTTGAGCGCTTATCAATTCTTTACGAGCAGATCGAGG 1257
||| | | ||||| |||||||| |||||||||||| ||||||| || |||||||| ||||
Sbjct 1038 TCACA-TCTGTGGCCATATTCACTTTGAGCGCTTAGCAATTCTGTATGAGCAGATGGAGG 1096
Query 1258 GGTTTC-TCGaaaaaaaTGGGTACTTTCTGTTGAATGAAAAGGGTGAGAAAATGAAGGAC 1316
|||| |||| ||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct 1097 A-TTTCCTCGAGAAAAACGGGTACTTTTTGTTGAATGAAAAGGGTGAGAAAATGAAGGAG 1155
Query 1317 CAGCTTGGTGTTGTCCGATCAAACTGCATAGATTGCTTAGACCGTACAAATGTCACCCAG 1376
||||||||| |||| ||| | |||||||||||||||||||||||||| ||||||||||||
Sbjct 1156 CAGCTTGGTATTGTGCGAACCAACTGCATAGATTGCTTAGACCGTACTAATGTCACCCAG 1215
Query 1377 AGCATGATAGGTCGAAAAATGTTAGAACTTCAACTCAAAAGGATTGGAGTTTTTGGCGCT 1436
|| |||||||| ||||| |||| ||||||||||||||||||||||| |||||||| ||
Sbjct 1216 AGTATGATAGGCCGAAAGCTGTTGGAACTTCAACTCAAAAGGATTGGTGTTTTTGGTGCC 1275
Query 1437 GAAGAAACCATAAGCTCACATCTGAATTTTGACGAACACTATAAAATATTATGGGCTAAT 1496
||||| |||||| |||| |||| || ||||||||| |||||| ||||| |||||||||
Sbjct 1276 GAAGAGACCATACGCTCGCATCAAAACTTTGACGAATGCTATAAGATATTGTGGGCTAAT 1335
Query 1497 CATGGTGATGAAATCAGCATTCAGTACTCTGGTACTCCTGCACTTAAAGGAGATTTCGTT 1556
|| |||||||| || |||||||||||||| || ||||||||||||||||||||||| ||
Sbjct 1336 CACGGTGATGACATTAGCATTCAGTACTCCGGCACTCCTGCACTTAAAGGAGATTTTGTC 1395
Query 1557 AGGTATGGGCATCGGACTGCCCATGGTGTCCTTAAAGATGGTTGGAGCT-CCCTCAG-AC 1614
|||||||| || ||||| ||| || |||||| ||||||| |||| | ||||| | ||
Sbjct 1396 AGGTATGGTCAAAGGACTATCCAAGGAGTCCTTCAAGATGGCTGGAA-TGCCCTC-GCAC 1453
Query 1615 GCTATTACCTGAATAACTTTGCTGATGGAACTAAGCAGGATGCAATTGATCTCCTGCAAG 1674
|||| |||||||| || ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1454 GCTACTACCTGAACAATTTTGCTGATGGAACTAAGCAGGATGCAATTGATCTTGTGCAAG 1513
Query 1675 GGCACTACATAGTTGCTGTGAGCCGAGACATGGCTCCTGTACCTC-AAAGGGGAGGCCTT 1733
| ||||| |||||||||||||||||||||||||||||||| |||| |||| | ||| |||
Sbjct 1514 GACACTATATAGTTGCTGTGAGCCGAGACATGGCTCCTGTGCCTCGAAAGCG-AGGTCTT 1572
Query 1734 GAGGCTGTAGCCAACTTCCCAGTGGCATTGTTCG-TGGTTCTGATGAGTTTCTGGTTTGC 1792
||||||||||| ||||| |||||||| ||| || || ||||||| ||||||||||||||
Sbjct 1573 GAGGCTGTAGCTAACTTTCCAGTGGCTTTGA-CGGTGATTCTGATCAGTTTCTGGTTTGC 1631
Query 1793 AACAGTGTCTCTAAAACAAGCTGGGAGTGATTATAAGCA-TAAGCACTTATTCTTCTCAT 1851
|||| ||||| | ||||||| |||||||| ||||||||| | || || |||| | | |
Sbjct 1632 AACAATGTCTGTGAAACAAGTTGGGAGTGGTTATAAGCACTT-GC--TT-TTCT-CAC-T 1685
Query 1852 TGTTGTGGACGGGAATTTGTGTGGGCATG--GCTGCACTGGTGAGGGCAAATGGCCGGAT 1909
||| ||| |||| || |||| | | || || ||||| |||||||| |||||||| ||
Sbjct 1686 GGTT-TGGGCGGGCATCAGTGTAG-C-TGTCGCGGCACTCGTGAGGGCCAATGGCCGTAT 1742
Query 1910 CTTCTGCAACCGGCCTCGTCTGCACAAGCCCAGA 1943
|||||||||||||||| |||||||||||||||||
Sbjct 1743 CTTCTGCAACCGGCCTAGTCTGCACAAGCCCAGA 1776
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 107228364120
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5