BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg485516
Length=2338
Score E
Sequences producing significant alignments: (Bits) Value
AT3G51632.1 | Symbols: CPuORF44 | conserved peptide upstream op... 3145 0.0
AT3G51630.1 | Symbols: WNK5, ZIK1, ATWNK5 | with no lysine (K) ... 3145 0.0
> AT3G51632.1 | Symbols: CPuORF44 | conserved peptide upstream
open reading frame 44 | chr3:19148907-19152193 FORWARD LENGTH=2499
Length=2499
Score = 3145 bits (1703), Expect = 0.0
Identities = 1994/2130 (94%), Gaps = 38/2130 (2%)
Strand=Plus/Plus
Query 232 CAGATGATTGCGAAAGAAGAGCAGGACGAATACAAAATACGCAAACAAGGTCTTGTTGTT 291
|||||||||||| | ||||||| |||||||||||| ||||| |||||||||||||| ||
Sbjct 316 CAGATGATTGCG--A-AAGAGCAAGACGAATACAAATTACGCCAACAAGGTCTTGTTTTT 372
Query 292 GAAATGGCTTCTC-TTACGCTCTGTTTTC-ATTATTCCAGACTCtttttttGGTTGCTCT 349
|||||||||||| || | |||| |||| |||| ||| |||||| |||||||||||||
Sbjct 373 CAAATGGCTTCTCTTTTC-CTCT-CTTTCGATTACTCCTTACTCTTCTTTTGGTTGCTCT 430
Query 350 TCCGCGTTTTCTCCTACGAGAATCACGAAGGAAAACACAAGATTTTCTAGCACTTCTCCT 409
|||||||||||| ||||||||||||||| |||||| | ||||||||||||| | |||
Sbjct 431 TCCGCGTTTTCTTATACGAGAATCACGAACGAAAACTCCAGATTTTCTAGCA---CACCT 487
Query 410 CTTCTCTCTGCATCGCGATCTTGttttttcccccaaattttcga--------tt-t-t-- 457
|||||||||||||||| ||||||||||||||||||||||||||| || | |
Sbjct 488 CTTCTCTCTGCATCGCCATCTTGTTTTTTCCCCCAAATTTTCGATTTTTTTTTTGTATAA 547
Query 458 -tttt----tt-tGATAGATCCGGTACGGAGCCATGTATATGGAGATCTCTTCTGCTTCC 511
|||| || ||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct 548 CTTTTGAGATTCTGATAGATCCGGTACGGAGTCATGTATATGGAGATTTCTTCTGCTTCC 607
Query 512 GATGATTCGATCCCATACGTTGAGACAGATCCTTCCGGTCGCTATGGACGTTTTAGAGAA 571
|||||||||||| | |||||||||||||||||||| |||||||| |||||||| ||||||
Sbjct 608 GATGATTCGATCGCTTACGTTGAGACAGATCCTTCTGGTCGCTACGGACGTTTCAGAGAA 667
Query 572 GTGCTTGGTAAAGGGGCGATGAAGACGGTTTACAAAGCATTTGACCAGGTTCTAGGAATG 631
|| ||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct 668 GTACTTGGCAAAGGGGCGATGAAGACGGTTTATAAAGCATTTGACCAGGTTTTAGGAATG 727
Query 632 GAAGTCGCTTGGAATCAAGTTAAGCTCAATGAGGTTTTCCGATCACCTGAGCCTTTACAA 691
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 728 GAAGTTGCTTGGAATCAAGTTAAGCTCAATGAGGTTTTCCGATCACCTGAGCCTTTACAA 787
Query 692 CGCCTTTACTCTGAGGTTCATCTTCTCAAGAATCTCAATCACGAATCCATTATTCGCTAC 751
||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 788 CGCCTCTACTCTGAGGTTCATCTCCTCAAGAATCTCAATCACGAATCCATTATTCGTTAC 847
Query 752 TGCACGTCTTGGATCGATGTCAACCGCAGAACATTTAACTTCATCACTGAGCTCTTCACA 811
||||||||||||||||||||||||||||||||||| |||||||| |||||||| || |||
Sbjct 848 TGCACGTCTTGGATCGATGTCAACCGCAGAACATTCAACTTCATTACTGAGCTGTTTACA 907
Query 812 TCAGGCACCCTTAGAGAGTATCGAAGGAAGTATCAAAAGGTTGATATCCGGGCAATCAAG 871
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 908 TCAGGCACCCTTAGAGAGTATAGAAGGAAGTATCAAAAGGTTGATATCCGGGCAATCAAG 967
Query 872 AGCTGGGCACGCCAGATCTTGAATGGTCTTGCTTACCTCCATGGACATGATCCTCCTGTC 931
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 968 AGCTGGGCACGTCAGATCTTGAATGGTCTTGCTTATCTCCATGGACATGATCCTCCTGTC 1027
Query 932 ATTCACAGAGACCTCAAATGCGATAATATCTTCGTTAACGGCCACCTTGGGCAAGTCAAG 991
|||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct 1028 ATTCACAGAGACCTCAAATGCGATAATATCTTCGTTAATGGACACCTTGGGCAAGTTAAG 1087
Query 992 ATTGGTGACCTGGGCTTAGCCGCAATACTCCGTGGATCACAAAATGCACACAGCGTCATA 1051
|||||||||||||||||||| ||||| || ||||||||||| ||||| ||||||||||||
Sbjct 1088 ATTGGTGACCTGGGCTTAGCTGCAATTCTTCGTGGATCACAGAATGCGCACAGCGTCATA 1147
Query 1052 GGAACGCCTGAATTTATGGCACCCGAGCTATATGAAGAAGATTACAACGAGCTTGTGGAC 1111
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 1148 GGAACGCCTGAATTTATGGCACCAGAGCTATATGAAGAAGATTACAACGAGCTTGTAGAC 1207
Query 1112 ATTTATTCGTTTGGAATGTGTGTCCTAGAGATGCTCACCGGTGAGTATCCATATAGTGAA 1171
|||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 1208 ATTTATTCGTTTGGTATGTGTGTCCTAGAGATGCTTACCGGTGAGTATCCTTATAGTGAA 1267
Query 1172 TGCACCAACCCTGCCCAAATATACAAGAAAGTTACATCGGGGAAGTTGCCTGACTCTTTC 1231
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1268 TGCACCAACCCTGCCCAAATATACAAGAAAGTTACATCGGGGAAGTTGCCTGACTCATTC 1327
Query 1232 CATCTAATCCAACACACGGAGGCCCAACGTTTTGTTGGTAAATGCCTGGAAACTGTGTCA 1291
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1328 CATCTAATCCAACACACGGAGGCCCAACGTTTTGTTGGTAAATGCTTGGAAACTGTGTCA 1387
Query 1292 AGACGATTGCCTGCAAAGGAGCTCTTGGGGGACCCATTCCTTGCCGCAACTGATGAGAAA 1351
||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||| |
Sbjct 1388 AGAAGATTGCCTGCAAAGGAGCTCTTAGCGGACCCATTCCTTGCCGCAACTGATGAGAGA 1447
Query 1352 GATTTGGCACCTCTTTCTAGATTGCCGCAACAATTGGCAATCCAGAATTTGGCTGCAAAT 1411
|||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1448 GATTTGGCGCCTCTTTTTAGATTGCCGCAACAATTGGCAATCCAGAATTTGGCTGCAAAT 1507
Query 1412 GGAACGGTGGTACAACATCTGCCGTCAACGACTGATCCAACTAGAACAACAGATATGTCA 1471
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1508 GGAACGGTGGTAGAGCATCTGCCGTCAACGACTGATCCAACTAGAACAACAGATATGTCA 1567
Query 1472 ATAACAGGAAAGATGAACTCAGAAGACCACACCATCTTTCTTCAAGTACAGATTTTAGAT 1531
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct 1568 ATAACAGGAAAGATGAACTCAGAAGACCACACCATCTTCCTTCAAGTACAGATTCTAGAT 1627
Query 1532 GGCGATGGTCACATGAGGAACATTCAGTTCCCGTTCAACATTTTAAGTGACACACCTCTA 1591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1628 GGCGATGGTCACATGAGGAACATTCAGTTCCCGTTCAACATTTTAAGTGACACACCTCTA 1687
Query 1592 GAAGTAGCTTTGGAGATGGTGAAAGAGCTTGAGATCGCTGATTGGGATCCTTTGGAGATC 1651
||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct 1688 GAAGTAGCTTTGGAGATGGTGAAGGAGCTTGAGATCACTGATTGGGATCCTTTGGAGATC 1747
Query 1652 GCTGCAATGATAGAAAATGAGATATCTTTGCTCGTCCCTAACTGGAGGGCCAATGACTCT 1711
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1748 GCTGCAATGATAGAAAATGAGATATCTTTGCTCGTCCCCAACTGGAGGGCCAATGACTCT 1807
Query 1712 TCTATCCGGCACCAAGGCTTTGGTCATGAAGATGATGAGGACAATGGTGA-AGCAGAGGG 1770
|||||||||||| || ||||||||||||||||||||||||||||||| || | |||||||
Sbjct 1808 TCTATCCGGCACGAAAGCTTTGGTCATGAAGATGATGAGGACAATGGCGACA-CAGAGGG 1866
Query 1771 AAGAACGCGCCTTTTCTCCTCTGCTTCTTCCTCTCACGACTCTCATGTAGCAGTTAGAGA 1830
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1867 AAGAACGCGCCTTTTCTCCTCTGCTTCTTCCTCTCACGACTCTCCTGTAGCAGTTAGAGA 1926
Query 1831 GAACAATGACGATTCTAGTAACGATGTGATCCCAGATATGGATGATGGCAATAGAAGCTC 1890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1927 GAACAATGACGATTCTAGTAACGATGTGATCCCAGATATGGATGATGGCAATAGAAGCTC 1986
Query 1891 TAACAGGTTGTTGAATTCTTCAACATACCACTACTCACCTGCCATTGATGATGATCAAAG 1950
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1987 TAACAGGTTGCTGAATTCTTCAACATACCACTACTCACCTGCCATTGATGATGATCAAAA 2046
Query 1951 TCAGCAACAGCGGAGACGAGTAAGGCTACAACAGAAAATGAGATCTCTGGTGGACACAAG 2010
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 2047 TCAGCAACAACGGAGACGAGTAAGGCTACAACAGAAAATGAGATCGCTGGTGGACACGAG 2106
Query 2011 AACGCAGGTGCTACACCGTTCGCTCATGGAGTTAATCAACAAGCGCCGTGGGCGTGGCTT 2070
||| |||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||
Sbjct 2107 AACACAGGTGCTACACCGATCGCTCATGGAGTTGATCAACAAGCGTCGTGGGCGTGGCTT 2166
Query 2071 CAACCCGAATGCGAACGAGCTACAACCTCAACCGTCGTCCACTGATTTCATTCGACGATG 2130
||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2167 TGACCCGAACACAAACGAGCTACAACCTCAACCGTCGTCCACTGATTTCATTCGACGATG 2226
Query 2131 TTGATAATAGGATGATGAGAGAGAGAGCCT-TTTGTGGCTCTTTCATGATAAAGACAGAT 2189
|||| ||||| |||||||||||| ||| |||||| ||||||||||||||||||||||
Sbjct 2227 TTGAAAATAGTATGATGAGAGAG----CCTATTTGTGACTCTTTCATGATAAAGACAGAT 2282
Query 2190 CTTCATATTGGTACTAGCATTTTGATTTGTTGATATTATATGAAATAATTGTTTTAGAGT 2249
||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||
Sbjct 2283 CTTCATATTGGTACTAGCATTTTGATTTGATGATACTATATGAAATAATTGTTT-AGAGT 2341
Query 2250 CCTTTGTATATATGATATTCTTAGGGAAGTGTTTATCTTTT-AGCTCGATCTCGATCTGA 2308
|||||||||||||||||||||||||||||||| | ||||| ||||| |||||||| |||
Sbjct 2342 GCTTTGTATATATGATATTCTTAGGGAAGTGTT-ACCTTTTTAGCTCTATCTCGATTTGA 2400
Query 2309 AAGCGATGCAAAATCGCACAAATTCGATTT 2338
||||||||||||| ||| | ||||||||||
Sbjct 2401 AAGCGATGCAAAACCGCTCGAATTCGATTT 2430
Score = 283 bits (153), Expect = 5e-75
Identities = 219/247 (89%), Gaps = 20/247 (8%)
Strand=Plus/Plus
Query 1 TTTTTGGGAATCAGAATCATCATCGATGGTGAATACAAAGCGTGGCAATAGGTTTTTCAA 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 32 TTTTTGGGAATCAGAATCATCATCGATGGTGAATCCAAAGCGTGGCAATAGGTTTTTCAA 91
Query 61 ATTCAGAA--ATG----TTGCTCTCT-TC-TC-T-TC---CAAATTCTCTTCCttttttt 107
|| ||||| || ||||||||| || || | || ||||||||||||||||| ||
Sbjct 92 ATACAGAATTGTGTAAATTGCTCTCTATCTTCTTCTCTTTCAAATTCTCTTCCTTTTGTT 151
Query 108 ATTTTCAATAACTTTTTCCCCACTTTGATGGGCTGCAACCACATATTCTTCT---ATCTT 164
| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 152 GTATTCAATAACTTTTTCCCCACTTTGATGGGCTGCAACCACATATTCTTCTTCTATCTT 211
Query 165 TAACTTTTCCCACCAAACTTGTTCCtttttttttttttGTTTGTTTGGGTTCTGGGTCTG 224
|||||||||||||||||||| | |||||||||| |||| ||| || ||||||||||||||
Sbjct 212 TAACTTTTCCCACCAAACTTCT-CCTTTTTTTTCTTTT-TTT-TT-GGGTTCTGGGTCTG 267
Query 225 CTTTTTT 231
|||||||
Sbjct 268 CTTTTTT 274
> AT3G51630.1 | Symbols: WNK5, ZIK1, ATWNK5 | with no lysine (K)
kinase 5 | chr3:19148907-19152193 FORWARD LENGTH=2499
Length=2499
Score = 3145 bits (1703), Expect = 0.0
Identities = 1994/2130 (94%), Gaps = 38/2130 (2%)
Strand=Plus/Plus
Query 232 CAGATGATTGCGAAAGAAGAGCAGGACGAATACAAAATACGCAAACAAGGTCTTGTTGTT 291
|||||||||||| | ||||||| |||||||||||| ||||| |||||||||||||| ||
Sbjct 316 CAGATGATTGCG--A-AAGAGCAAGACGAATACAAATTACGCCAACAAGGTCTTGTTTTT 372
Query 292 GAAATGGCTTCTC-TTACGCTCTGTTTTC-ATTATTCCAGACTCtttttttGGTTGCTCT 349
|||||||||||| || | |||| |||| |||| ||| |||||| |||||||||||||
Sbjct 373 CAAATGGCTTCTCTTTTC-CTCT-CTTTCGATTACTCCTTACTCTTCTTTTGGTTGCTCT 430
Query 350 TCCGCGTTTTCTCCTACGAGAATCACGAAGGAAAACACAAGATTTTCTAGCACTTCTCCT 409
|||||||||||| ||||||||||||||| |||||| | ||||||||||||| | |||
Sbjct 431 TCCGCGTTTTCTTATACGAGAATCACGAACGAAAACTCCAGATTTTCTAGCA---CACCT 487
Query 410 CTTCTCTCTGCATCGCGATCTTGttttttcccccaaattttcga--------tt-t-t-- 457
|||||||||||||||| ||||||||||||||||||||||||||| || | |
Sbjct 488 CTTCTCTCTGCATCGCCATCTTGTTTTTTCCCCCAAATTTTCGATTTTTTTTTTGTATAA 547
Query 458 -tttt----tt-tGATAGATCCGGTACGGAGCCATGTATATGGAGATCTCTTCTGCTTCC 511
|||| || ||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct 548 CTTTTGAGATTCTGATAGATCCGGTACGGAGTCATGTATATGGAGATTTCTTCTGCTTCC 607
Query 512 GATGATTCGATCCCATACGTTGAGACAGATCCTTCCGGTCGCTATGGACGTTTTAGAGAA 571
|||||||||||| | |||||||||||||||||||| |||||||| |||||||| ||||||
Sbjct 608 GATGATTCGATCGCTTACGTTGAGACAGATCCTTCTGGTCGCTACGGACGTTTCAGAGAA 667
Query 572 GTGCTTGGTAAAGGGGCGATGAAGACGGTTTACAAAGCATTTGACCAGGTTCTAGGAATG 631
|| ||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct 668 GTACTTGGCAAAGGGGCGATGAAGACGGTTTATAAAGCATTTGACCAGGTTTTAGGAATG 727
Query 632 GAAGTCGCTTGGAATCAAGTTAAGCTCAATGAGGTTTTCCGATCACCTGAGCCTTTACAA 691
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 728 GAAGTTGCTTGGAATCAAGTTAAGCTCAATGAGGTTTTCCGATCACCTGAGCCTTTACAA 787
Query 692 CGCCTTTACTCTGAGGTTCATCTTCTCAAGAATCTCAATCACGAATCCATTATTCGCTAC 751
||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 788 CGCCTCTACTCTGAGGTTCATCTCCTCAAGAATCTCAATCACGAATCCATTATTCGTTAC 847
Query 752 TGCACGTCTTGGATCGATGTCAACCGCAGAACATTTAACTTCATCACTGAGCTCTTCACA 811
||||||||||||||||||||||||||||||||||| |||||||| |||||||| || |||
Sbjct 848 TGCACGTCTTGGATCGATGTCAACCGCAGAACATTCAACTTCATTACTGAGCTGTTTACA 907
Query 812 TCAGGCACCCTTAGAGAGTATCGAAGGAAGTATCAAAAGGTTGATATCCGGGCAATCAAG 871
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 908 TCAGGCACCCTTAGAGAGTATAGAAGGAAGTATCAAAAGGTTGATATCCGGGCAATCAAG 967
Query 872 AGCTGGGCACGCCAGATCTTGAATGGTCTTGCTTACCTCCATGGACATGATCCTCCTGTC 931
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 968 AGCTGGGCACGTCAGATCTTGAATGGTCTTGCTTATCTCCATGGACATGATCCTCCTGTC 1027
Query 932 ATTCACAGAGACCTCAAATGCGATAATATCTTCGTTAACGGCCACCTTGGGCAAGTCAAG 991
|||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct 1028 ATTCACAGAGACCTCAAATGCGATAATATCTTCGTTAATGGACACCTTGGGCAAGTTAAG 1087
Query 992 ATTGGTGACCTGGGCTTAGCCGCAATACTCCGTGGATCACAAAATGCACACAGCGTCATA 1051
|||||||||||||||||||| ||||| || ||||||||||| ||||| ||||||||||||
Sbjct 1088 ATTGGTGACCTGGGCTTAGCTGCAATTCTTCGTGGATCACAGAATGCGCACAGCGTCATA 1147
Query 1052 GGAACGCCTGAATTTATGGCACCCGAGCTATATGAAGAAGATTACAACGAGCTTGTGGAC 1111
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 1148 GGAACGCCTGAATTTATGGCACCAGAGCTATATGAAGAAGATTACAACGAGCTTGTAGAC 1207
Query 1112 ATTTATTCGTTTGGAATGTGTGTCCTAGAGATGCTCACCGGTGAGTATCCATATAGTGAA 1171
|||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 1208 ATTTATTCGTTTGGTATGTGTGTCCTAGAGATGCTTACCGGTGAGTATCCTTATAGTGAA 1267
Query 1172 TGCACCAACCCTGCCCAAATATACAAGAAAGTTACATCGGGGAAGTTGCCTGACTCTTTC 1231
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1268 TGCACCAACCCTGCCCAAATATACAAGAAAGTTACATCGGGGAAGTTGCCTGACTCATTC 1327
Query 1232 CATCTAATCCAACACACGGAGGCCCAACGTTTTGTTGGTAAATGCCTGGAAACTGTGTCA 1291
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1328 CATCTAATCCAACACACGGAGGCCCAACGTTTTGTTGGTAAATGCTTGGAAACTGTGTCA 1387
Query 1292 AGACGATTGCCTGCAAAGGAGCTCTTGGGGGACCCATTCCTTGCCGCAACTGATGAGAAA 1351
||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||| |
Sbjct 1388 AGAAGATTGCCTGCAAAGGAGCTCTTAGCGGACCCATTCCTTGCCGCAACTGATGAGAGA 1447
Query 1352 GATTTGGCACCTCTTTCTAGATTGCCGCAACAATTGGCAATCCAGAATTTGGCTGCAAAT 1411
|||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1448 GATTTGGCGCCTCTTTTTAGATTGCCGCAACAATTGGCAATCCAGAATTTGGCTGCAAAT 1507
Query 1412 GGAACGGTGGTACAACATCTGCCGTCAACGACTGATCCAACTAGAACAACAGATATGTCA 1471
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1508 GGAACGGTGGTAGAGCATCTGCCGTCAACGACTGATCCAACTAGAACAACAGATATGTCA 1567
Query 1472 ATAACAGGAAAGATGAACTCAGAAGACCACACCATCTTTCTTCAAGTACAGATTTTAGAT 1531
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct 1568 ATAACAGGAAAGATGAACTCAGAAGACCACACCATCTTCCTTCAAGTACAGATTCTAGAT 1627
Query 1532 GGCGATGGTCACATGAGGAACATTCAGTTCCCGTTCAACATTTTAAGTGACACACCTCTA 1591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1628 GGCGATGGTCACATGAGGAACATTCAGTTCCCGTTCAACATTTTAAGTGACACACCTCTA 1687
Query 1592 GAAGTAGCTTTGGAGATGGTGAAAGAGCTTGAGATCGCTGATTGGGATCCTTTGGAGATC 1651
||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct 1688 GAAGTAGCTTTGGAGATGGTGAAGGAGCTTGAGATCACTGATTGGGATCCTTTGGAGATC 1747
Query 1652 GCTGCAATGATAGAAAATGAGATATCTTTGCTCGTCCCTAACTGGAGGGCCAATGACTCT 1711
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1748 GCTGCAATGATAGAAAATGAGATATCTTTGCTCGTCCCCAACTGGAGGGCCAATGACTCT 1807
Query 1712 TCTATCCGGCACCAAGGCTTTGGTCATGAAGATGATGAGGACAATGGTGA-AGCAGAGGG 1770
|||||||||||| || ||||||||||||||||||||||||||||||| || | |||||||
Sbjct 1808 TCTATCCGGCACGAAAGCTTTGGTCATGAAGATGATGAGGACAATGGCGACA-CAGAGGG 1866
Query 1771 AAGAACGCGCCTTTTCTCCTCTGCTTCTTCCTCTCACGACTCTCATGTAGCAGTTAGAGA 1830
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1867 AAGAACGCGCCTTTTCTCCTCTGCTTCTTCCTCTCACGACTCTCCTGTAGCAGTTAGAGA 1926
Query 1831 GAACAATGACGATTCTAGTAACGATGTGATCCCAGATATGGATGATGGCAATAGAAGCTC 1890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1927 GAACAATGACGATTCTAGTAACGATGTGATCCCAGATATGGATGATGGCAATAGAAGCTC 1986
Query 1891 TAACAGGTTGTTGAATTCTTCAACATACCACTACTCACCTGCCATTGATGATGATCAAAG 1950
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1987 TAACAGGTTGCTGAATTCTTCAACATACCACTACTCACCTGCCATTGATGATGATCAAAA 2046
Query 1951 TCAGCAACAGCGGAGACGAGTAAGGCTACAACAGAAAATGAGATCTCTGGTGGACACAAG 2010
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 2047 TCAGCAACAACGGAGACGAGTAAGGCTACAACAGAAAATGAGATCGCTGGTGGACACGAG 2106
Query 2011 AACGCAGGTGCTACACCGTTCGCTCATGGAGTTAATCAACAAGCGCCGTGGGCGTGGCTT 2070
||| |||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||
Sbjct 2107 AACACAGGTGCTACACCGATCGCTCATGGAGTTGATCAACAAGCGTCGTGGGCGTGGCTT 2166
Query 2071 CAACCCGAATGCGAACGAGCTACAACCTCAACCGTCGTCCACTGATTTCATTCGACGATG 2130
||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2167 TGACCCGAACACAAACGAGCTACAACCTCAACCGTCGTCCACTGATTTCATTCGACGATG 2226
Query 2131 TTGATAATAGGATGATGAGAGAGAGAGCCT-TTTGTGGCTCTTTCATGATAAAGACAGAT 2189
|||| ||||| |||||||||||| ||| |||||| ||||||||||||||||||||||
Sbjct 2227 TTGAAAATAGTATGATGAGAGAG----CCTATTTGTGACTCTTTCATGATAAAGACAGAT 2282
Query 2190 CTTCATATTGGTACTAGCATTTTGATTTGTTGATATTATATGAAATAATTGTTTTAGAGT 2249
||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||
Sbjct 2283 CTTCATATTGGTACTAGCATTTTGATTTGATGATACTATATGAAATAATTGTTT-AGAGT 2341
Query 2250 CCTTTGTATATATGATATTCTTAGGGAAGTGTTTATCTTTT-AGCTCGATCTCGATCTGA 2308
|||||||||||||||||||||||||||||||| | ||||| ||||| |||||||| |||
Sbjct 2342 GCTTTGTATATATGATATTCTTAGGGAAGTGTT-ACCTTTTTAGCTCTATCTCGATTTGA 2400
Query 2309 AAGCGATGCAAAATCGCACAAATTCGATTT 2338
||||||||||||| ||| | ||||||||||
Sbjct 2401 AAGCGATGCAAAACCGCTCGAATTCGATTT 2430
Score = 283 bits (153), Expect = 5e-75
Identities = 219/247 (89%), Gaps = 20/247 (8%)
Strand=Plus/Plus
Query 1 TTTTTGGGAATCAGAATCATCATCGATGGTGAATACAAAGCGTGGCAATAGGTTTTTCAA 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 32 TTTTTGGGAATCAGAATCATCATCGATGGTGAATCCAAAGCGTGGCAATAGGTTTTTCAA 91
Query 61 ATTCAGAA--ATG----TTGCTCTCT-TC-TC-T-TC---CAAATTCTCTTCCttttttt 107
|| ||||| || ||||||||| || || | || ||||||||||||||||| ||
Sbjct 92 ATACAGAATTGTGTAAATTGCTCTCTATCTTCTTCTCTTTCAAATTCTCTTCCTTTTGTT 151
Query 108 ATTTTCAATAACTTTTTCCCCACTTTGATGGGCTGCAACCACATATTCTTCT---ATCTT 164
| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 152 GTATTCAATAACTTTTTCCCCACTTTGATGGGCTGCAACCACATATTCTTCTTCTATCTT 211
Query 165 TAACTTTTCCCACCAAACTTGTTCCtttttttttttttGTTTGTTTGGGTTCTGGGTCTG 224
|||||||||||||||||||| | |||||||||| |||| ||| || ||||||||||||||
Sbjct 212 TAACTTTTCCCACCAAACTTCT-CCTTTTTTTTCTTTT-TTT-TT-GGGTTCTGGGTCTG 267
Query 225 CTTTTTT 231
|||||||
Sbjct 268 CTTTTTT 274
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 116063660040
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5