BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg485540
Length=2080
Score E
Sequences producing significant alignments: (Bits) Value
AT3G51850.1 | Symbols: CPK13 | calcium-dependent protein kinase... 3247 0.0
AT2G41860.1 | Symbols: CPK14 | calcium-dependent protein kinase... 457 2e-127
AT3G57530.1 | Symbols: CPK32, ATCPK32, CDPK32 | calcium-depende... 442 7e-123
> AT3G51850.1 | Symbols: CPK13 | calcium-dependent protein kinase
13 | chr3:19232467-19235889 FORWARD LENGTH=2150
Length=2150
Score = 3247 bits (1758), Expect = 0.0
Identities = 2003/2115 (95%), Gaps = 41/2115 (2%)
Strand=Plus/Plus
Query 1 ACCGTACGCTTCTTCGATCTACGCTTCTCTCTAGCTATAGCTTCCATTGTTACGATTCCT 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 28 ACCGTACGCTTCTTCGATCTACGCTTCTCTCTAGCTATAGCTTCCATTGTCACGATTCCT 87
Query 61 CCCAAAGCGTAGAATGTGGAACCCTAGATACCTCAAATTCAGCTAGAGATCTATCTACTT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 88 CCCAAAGCGTAGAATGTGGAACCCTAGATACCTCAAATTCAGCTAGAGATCTATCTACTT 147
Query 121 TTACCTCTATTACTTTCTAC-T-T--------T--T--GA---A-ACACAGTGATGGGGA 162
| |||||||||||||||||| | | | | || | ||||||||||||| |
Sbjct 148 TCACCTCTATTACTTTCTACTTCTGAAACCCCTCATCAGAGCTACACACAGTGATGGGAA 207
Query 163 ACTGTTGCAGATCTCCCGCAGCTGTAGCTAGAGAAGACGTGAAATCGAACTATTCCGGCC 222
|||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||
Sbjct 208 ACTGTTGCAGATCTCCCGCAGCAGTTGCTAGAGAAGACGTGAAATCCAACTATTCCGGCC 267
Query 223 ACGATCACGCCCGTAAAGACGCCGGCGGCGGTAAAAAATCGGCGCCGATTCGAGTTCTCA 282
||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct 268 ACGATCACGCCCGCAAAGACGCCGCCGGCGGTAAAAAATCGGCGCCGATTCGAGTTCTAA 327
Query 283 GCGATGTTCCCAAGGAAAACATCGAGGACCGTTACTTACTCGACAGAGAACTCGGCCGCG 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 328 GCGATGTTCCCAAGGAAAACATCGAGGACCGTTACTTACTCGACAGAGAACTCGGCCGCG 387
Query 343 GCGAGTTTGGTGTCACTTACCTCTGTATCGAGAGGTCTTCGCGTGACCTACTCGCTTGCA 402
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 388 GCGAGTTTGGTGTCACTTACCTCTGTATCGAGAGGTCCTCGCGTGACCTACTCGCTTGCA 447
Query 403 AGTCGATCTCGAAGAGGAAGCTTAGGACTGCTGTGGATATTGAGGATGTTAAAAGAGAAG 462
| |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 448 AATCGATCTCCAAGAGGAAGCTTAGAACTGCTGTGGATATTGAAGATGTTAAAAGAGAAG 507
Query 463 TGGCGATTATGAAGCATTTGCCTAAGAGTTCGAGTATTGTTACTTTGAAGGAAGCTTGTG 522
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 508 TAGCGATTATGAAGCATTTGCCTAAGAGTTCGAGTATTGTTACTTTGAAAGAAGCTTGTG 567
Query 523 AGGATGATAATGCTGTGCATTTGGTTATGGAGCTTTGTGAAGGTGGTGAGCTTTTCGATC 582
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 568 AGGATGATAATGCTGTGCATTTGGTTATGGAGCTTTGTGAAGGTGGCGAGCTTTTCGATC 627
Query 583 GGATTGTTGCGAGAGGGCATTATACGGAGCGTGCTGCTGCTGGGGTTACTAAGACGATTG 642
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 628 GGATTGTTGCGAGAGGTCATTATACGGAGCGTGCTGCTGCTGGTGTTACTAAGACTATTG 687
Query 643 TTGAGGTTGTGCAACTTTGCCATAAGCATGGTGTGATTCATAGAGATTTGAAGCCGGAGA 702
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 688 TTGAGGTTGTGCAGCTTTGTCATAAGCATGGTGTGATTCATAGAGATTTGAAGCCCGAGA 747
Query 703 ATTTTTTGTTCGCTAACAAGAAGGAGAACTCGCCGTTGAAAGCTATTGATTTTGGATTGT 762
| |||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 748 ACTTTTTGTTTGCTAATAAGAAGGAGAACTCGCCTTTGAAAGCTATTGATTTTGGATTGT 807
Query 763 CGATTTTCTTCAAGCCAGGTGAGAAGTTCTCCGAGATTGTTGGGAGTCCATATTACATGG 822
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 808 CGATTTTCTTCAAGCCAGGTGAGAAATTCTCTGAGATTGTTGGGAGTCCATATTACATGG 867
Query 823 CACCTGAGGTGCTTAAGCGGAACTATGGACCCGAAATAGATATTTGGAGTGCTGGAGTGA 882
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 868 CACCTGAGGTGCTTAAGCGGAATTATGGACCCGAAATAGATATTTGGAGTGCTGGAGTGA 927
Query 883 TTCTTTATATTCTGTTGTGTGGAGTTCCCCCATTCTGGGCAGAGTCAGAACAGGGAGTTG 942
||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 928 TTCTTTATATTCTCTTGTGTGGAGTTCCTCCGTTCTGGGCAGAGTCAGAACAGGGAGTTG 987
Query 943 CTCAGGCTATTCTGCGCGGGGTAATTGATTTTAAGAGGGAACCGTGGCCAAACATTTCTG 1002
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 988 CTCAGGCTATTCTGCGTGGAGTAATTGATTTTAAGAGGGAACCGTGGCCAAACATTTCTG 1047
Query 1003 AGACCGCTAAGAATCTAGTCAGACAAATGTTAGAGCCTGATCCAAAGCGTCGGCTGACTG 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1048 AGACCGCTAAGAATCTAGTCAGACAAATGTTAGAGCCTGATCCAAAGCGTCGGCTGACTG 1107
Query 1063 CAAAACAAGTGCTTGAGCACCCATGGATTCAGAACGCAAAGAAAGCTCCCAATGTTCCTC 1122
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1108 CAAAGCAAGTGCTTGAGCACCCATGGATTCAGAACGCAAAGAAAGCTCCCAATGTTCCTC 1167
Query 1123 TTGGAGATGTTGTGAAGTCCAGGTTGAAGCAATTTTCAGTGATGAACAGATTCAAGAGAA 1182
||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct 1168 TTGGAGATGTTGTGAAGTCGAGGTTGAAGCAATTTTCAGTGATGAACCGATTCAAGAGAA 1227
Query 1183 AAGCTTTGAGGGTTATTGCCGAATTCTTATCTACCGAAGAAGTAGAAGACATCAAAGTAA 1242
||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct 1228 AAGCTTTAAGGGTTATTGCCGAATTTTTATCTACGGAAGAAGTAGAAGACATCAAAGTAA 1287
Query 1243 TGTTCAACAAGATGGATACTGATAATGATGGTATAGTTTCCATTGAGGAGTTGAAAGCCG 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1288 TGTTCAACAAGATGGATACTGATAATGATGGTATAGTTTCCATTGAGGAGTTGAAAGCCG 1347
Query 1303 GACTTCGCGATTTTGGTACACAGCTAGCGGAATCAGAAGTCCAGATGCTTATTGAAGCGG 1362
||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1348 GACTTCGTGATTTTAGTACACAGCTAGCGGAATCAGAAGTTCAGATGCTTATTGAAGCGG 1407
Query 1363 TGGATACTAAAGGGAAAGGAACTCTGGACTATGGGGAATTTGTTGCAGTTTCTCTCCACC 1422
||||||||||||| ||||||||||| |||||||| |||||||| ||||| ||||||||||
Sbjct 1408 TGGATACTAAAGGAAAAGGAACTCTAGACTATGGAGAATTTGTAGCAGTGTCTCTCCACC 1467
Query 1423 TGCAAAAGGTAGCAAACGATGAGCATCTCCGCAAAGCCTTCTCATACTTTGACAAGGATG 1482
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1468 TGCAAAAGGTAGCAAACGATGAGCATCTCCGCAAAGCCTTCTCTTACTTTGACAAGGATG 1527
Query 1483 GAAATGGGTACATTTTACCCCAGGAGCTTTGTGACGCCTTAAAGGAAGATGGAGGAGATG 1542
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1528 GAAATGGGTACATTTTGCCCCAGGAGCTTTGTGACGCCTTAAAGGAAGATGGAGGAGATG 1587
Query 1543 ACTGTGTGGATGTCGCCAATGATATATTCCAAGAAGTTGACACAGACAAGGATGGCCGAA 1602
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1588 ACTGTGTGGATGTCGCCAATGATATATTCCAAGAAGTTGACACAGACAAGGATGGGAGAA 1647
Query 1603 TAAGCTACGAAGAGTTTGCGGCAATGATGAAAACAGGAACTGATTGGAGAAAGGCGTCTC 1662
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1648 TAAGCTACGAAGAGTTTGCGGCAATGATGAAAACAGGAACGGATTGGAGAAAGGCGTCTC 1707
Query 1663 GTCATTACTCAAGAGGGAGATTCAATAGCCTAAGCATCAAGCTAATGAAGGACGGATCTT 1722
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1708 GTCATTACTCAAGAGGGAGATTCAATAGCCTAAGCATCAAGCTAATGAAGGACGGGTCTT 1767
Query 1723 TAAACCTAGGCAACGAATAGGGAATCAAAGTGAAGAAGCTGCATTAGGGTTTTTAGAGTC 1782
| |||||||||||||||||| |||||||||||||||||| ||| |||||| ||||| |||
Sbjct 1768 TGAACCTAGGCAACGAATAGCGAATCAAAGTGAAGAAGCCGCAATAGGGTCTTTAGTGTC 1827
Query 1783 TGTCTCTCACGCCACACGTCCTCGCCCACGTCAAGTATTCAGCCAAGAGAAGGTAAATCT 1842
||||||||||||||| || |||| ||||||||||||| | ||||||||||||||| ||
Sbjct 1828 TGTCTCTCACGCCAC--GTTCTCGTGCACGTCAAGTATTAAACCAAGAGAAGGTAAAACT 1885
Query 1843 TGGGATTCAGAATTCATATCTTTTTGTACATCTTTCGTTTTT-AACCTTTATATTTTTGG 1901
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct 1886 TGGGATTCAGAATTCATATCTTTTTGTACATCTTTCGTTTTTTAACCTTTCTATTTTTGG 1945
Query 1902 TGATTATGTTAT--GTGT----------ATTGGTTTATGGGCTGAGTTGTGTTTGTTTAG 1949
|||||||||||| |||| ||||||||||||| ||||||||||||||||||
Sbjct 1946 TGATTATGTTATCTGTGTTCTTTTTTTTATTGGTTTATGGGTTGAGTTGTGTTTGTTTAG 2005
Query 1950 TTTGTTGTTGTGGTAGAAATCCAAAAGACATGAGAATCAGTGTTTGATGTGTAGAAGGaa 2009
|||||| | | | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2006 TTTGTTCT-G-G-TAGAAATCCAAAAGACATGAGAATCAGTGTTTGATGTGTAGAAGGAA 2062
Query 2010 aaaaaa--a--GACCATTTTCTGGTAATGATTTTGTAATATTCTTTTGTCTTCCTTAACC 2065
|||||| | |||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 2063 AAAAAACCAAAGACCATTT-CTGGTAATGATGTTGTAATATTCTTTTGTCTTCCTTAACC 2121
Query 2066 TCTATAATGATATGA 2080
|||||||||||||||
Sbjct 2122 TCTATAATGATATGA 2136
> AT2G41860.1 | Symbols: CPK14 | calcium-dependent protein kinase
14 | chr2:17467344-17469786 REVERSE LENGTH=1895
Length=1895
Score = 457 bits (247), Expect = 2e-127
Identities = 582/741 (79%), Gaps = 34/741 (5%)
Strand=Plus/Plus
Query 394 TCGCTTGCAAGTCGATCTCGAAGAGGAAGCTTAGGACTGCT-G-TGGATATTGAGGATGT 451
|||| ||||| || |||| |||| |||||| | || | | | | ||||| ||||| ||
Sbjct 239 TCGCATGCAAATCAATCTTAAAGAAGAAGCTGAAAAC-G-TCGATTGATATAGAGGACGT 296
Query 452 TAAAAGAGAAGTGGCGATTATGAAGCATTTGCCT-AAGAGTTCGAGTATTGTTACTTTGA 510
||| |||||||| | ||| |||| ||| ||||| || | | | | ||||||||||||||
Sbjct 297 TAAGAGAGAAGTTGAGATCATGAGGCAAATGCCTGAACA-TCCTAATATTGTTACTTTGA 355
Query 511 AGGAAG-CTTGTGAGGATGATAATGCTGTGCATTTGGTTATGGAGCTTTGTGAAGGTGGT 569
| | || ||| |||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 356 AAG-AGACTTATGAGGATGATAAAGCTGTGCATTTGGTTATGGAGCTTTGTGAAGGCGGT 414
Query 570 GAGCTTTTCGATCGGATTGTTGCGAGAGGGCATTATACGGAGCGTGCTGCTGCTGGGGTT 629
|||||||||||| |||||||||| |||||||||||||||||| | ||||||||| ||||
Sbjct 415 GAGCTTTTCGATAGGATTGTTGCTAGAGGGCATTATACGGAGAGAGCTGCTGCTTCGGTT 474
Query 630 ACTAAGACGATTGTTGAGGTTGTGCA-ACTTTGCCATAAGCATGGTGTGATTCATAGAGA 688
| ||| ||||| | |||||||| || | | || ||||||||||| || || || |||||
Sbjct 475 ATTAAAACGATCATCGAGGTTGTTCAGA-TGTGTCATAAGCATGGAGTAATGCACAGAGA 533
Query 689 TTTGAAGCCGGAGAATTTTTTGTTCGCTAACAAGAAGGAGAACTCGC--CGTTGAAAGCT 746
||| || || ||||| || ||||| || ||||||||||| |||| || | ||||| |||
Sbjct 534 TTTAAAACCTGAGAACTTCTTGTTTGCAAACAAGAAGGA-AACT-GCATCTTTGAAGGCT 591
Query 747 ATTGATTTTGGAT-TGTC-GATTTTCTTCAAGCCAGGTGAGA-AGTTCTCCGAGATTGTT 803
||||||||||| | | || | ||||||| || ||||| |||| | || | || ||||||
Sbjct 592 ATTGATTTTGG-TCTCTCTG-TTTTCTTTAAACCAGGCGAGAGATTTAAC-GAAATTGTT 648
Query 804 GGGAGTCCATATTACATGGCACCTGAGGTGCTTAAGC-GGAACTATGGACCCGAAATAGA 862
|||||||| || |||||||| |||||||| ||||| ||| ||||||| ||||| ||
Sbjct 649 GGGAGTCCTTACTACATGGCTCCTGAGGTA-TTAAGGAGGAGTTATGGACAAGAAATTGA 707
Query 863 TATTTGGAGTGCTGGAGTGATTCTTTATAT-TCTGTTGTGTGGAGTTCCCCCATTCTGGG 921
|||||||| || |||||||||||||| || | || | ||||| ||||| || || ||||
Sbjct 708 CATTTGGAGCGCAGGAGTGATTCTTTACATAT-TGCTCTGTGGTGTTCCACCTTTTTGGG 766
Query 922 CAGAGTCAGAACAGGGAGTTGCTCAGGCTATTCTGCGCGGGGTAATTGATTTTAAGAGGG 981
|||| | ||||| ||||| || | || ||||| |||||||| ||||| || |
Sbjct 767 CAGAAACCGAACATGGAGTCGCAAAAGCAATTCTTAAATCTGTAATTGACTTTAAAAGAG 826
Query 982 AACCGTGGCC-AAACATTTCTGAGACCGCTAA-GAATCT-AGTCAGACAA-ATG-TTAGA 1036
| || ||||| ||| ||||||| | || || || ||| | ||| | || ||| || |
Sbjct 827 ACCCCTGGCCTAAAG-TTTCTGATAATGCAAAAGA-TCTGA-TCAAA-AAGATGCTTC-A 881
Query 1037 GCCTGATCCAAAGCGTCGGCTGACTGCAAAACAAGTGCTTGAGCACCCATGGATTCAGAA 1096
|||||||||| |||||| || ||||| ||||||||||||| || || ||||| |||||
Sbjct 882 TCCTGATCCAAGGCGTCGTCTAACTGCTCAACAAGTGCTTGATCATCCGTGGATACAGAA 941
Query 1097 CGCAAAGAAAGCTCCCAATGT 1117
| ||||| ||| |||||||
Sbjct 942 TGGTAAGAATGCTTCCAATGT 962
> AT3G57530.1 | Symbols: CPK32, ATCPK32, CDPK32 | calcium-dependent
protein kinase 32 | chr3:21296554-21299591 REVERSE LENGTH=2201
Length=2201
Score = 442 bits (239), Expect = 7e-123
Identities = 636/825 (77%), Gaps = 38/825 (5%)
Strand=Plus/Plus
Query 396 GCTTGCAAGTCGATCTCGAAGAGGAAGCTTAGGACTGCTGTGGATATTGAGGATGTTAAA 455
||||| || ||||| | ||||| |||||| ||||| ||||| |||||||| |||||||
Sbjct 508 GCTTGTAAATCGATTTTGAAGAAGAAGCTGAGGACAGCTGTTGATATTGAAGATGTTAGG 567
Query 456 AGAGAAGTGGCGATTATGAAGCATTTGCCTAAG-AGTTCGAGTATTGTTACTTTGAAGGA 514
||||| || | |||||||| |||| ||||| || | | | | | |||||||||||||||
Sbjct 568 AGAGAGGTTGAGATTATGAGGCATATGCCTGAGCA-TCCTAATGTTGTTACTTTGAAGG- 625
Query 515 AG-CTTGTGAGGATGATAATGCTGTGCATTTGGTTATGGAGCTTTGTGAAGGTGGTGAGC 573
|| ||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct 626 AGACTTATGAGGATGAGCATGCTGTTCATTTGGTTATGGAGCTTTGTGAAGGTGGTGAAT 685
Query 574 T-TTTCGATCGGATTGTTGCGAGAGGGCATTATACGGAGCGTGCTGCTGCTGGGGTTACT 632
| ||| ||| |||||||||| |||||||||||||| ||| | |||||||||| || |||
Sbjct 686 TGTTT-GATAGGATTGTTGCTAGAGGGCATTATACTGAGAGAGCTGCTGCTGCTGTCACT 744
Query 633 AAGACGATTGTTGAGGTTGTGCAACTTTGCCATAAGCATGGTGTGATTCATAGAGATTTG 692
||||| || | || ||||| || | || ||||||||||| || || || || || ||
Sbjct 745 AAGACCATCATGGAAGTTGTTCAGGTGTGTCATAAGCATGGGGTAATGCACAGGGACCTG 804
Query 693 AAGCCGGAGAATTTTTTGTTCGCTAACAAGAAGGAGAACT-CGCCG-TTGAAAGCTATTG 750
|| || ||||| || ||||| | ||||||||||||| || | || || || || ||||
Sbjct 805 AAACCTGAGAACTTCTTGTTTGGAAACAAGAAGGAGA-CTGCACCTCTT-AAGGCGATTG 862
Query 751 ATTTTGGAT-TGTC-GATTTTCTTCAAGCCAGGTGAGAAGTTCTC-CGAGATTGTTGGGA 807
||||||| | | || | ||||||| || ||||| |||| ||| | ||| || ||||| |
Sbjct 863 ATTTTGG-TCTCTCTG-TTTTCTTTAAACCAGGCGAGAGGTT-TAACGAAATCGTTGGTA 919
Query 808 GTCCATATTACATGGCACCTGAGGTGCTTAAGCGGAACTATGGACCCGAAATAGATATTT 867
|||| || |||||||| || |||||||| || ||||| ||||| || ||| | |||||||
Sbjct 920 GTCCGTACTACATGGCTCCCGAGGTGCTAAAACGGAATTATGGTCCAGAAGTTGATATTT 979
Query 868 GGAGTGCTGGAGTGATTCTTTATATTCTGTTGTGTGGAGTTCCC-CCATTCTGGGCAGAG 926
||||||| || || |||||||| || ||| | ||||| || ||| || |||||||||||
Sbjct 980 GGAGTGCAGGTGTAATTCTTTACATACTGCTATGTGGTGT-CCCGCCTTTCTGGGCAGAA 1038
Query 927 TCAGAACAGGGAGTTGCTCAGGCTATTCTGCGCGGGGTAATTGATTTTAAGA-GGGAACC 985
| ||||| |||||||| || || ||| | || ||| | || || | || |||| ||
Sbjct 1039 ACTGAACAAGGAGTTGCACAAGCAATTATTCGATCTGTACTAGACTTCA-GAAGGGACCC 1097
Query 986 GTGGCCAAACATTTCTGAGACCGCTAA-GAATCT-AGTCAG-ACAAATG-TTAGAGCCTG 1041
||||| || ||||||| | ||| || || || | |||| | ||||| || || ||||
Sbjct 1098 ATGGCCCAAGGTTTCTGAAAACGCAAAAGAC-CTTA-TCAGGA-AAATGCTT-GATCCTG 1153
Query 1042 ATCCAAA-GCGTCGGCTGACTGCAAAACAAGTGCTTGAGCACCCATGGATT-CAGAACGC 1099
| ||||| |||||| || || || ||||||| || || ||||| ||| || ||||| ||
Sbjct 1154 A-CCAAAAGCGTCGTCTTACAGCTCAACAAGTCCTAGATCACCCGTGG-TTACAGAATGC 1211
Query 1100 AAAGAAAGCTCCCAATGT-TCCTCTTGGAGATGTTGTGAAGTCCAGGTTGAAGCAATTTT 1158
||||| ||| |||||||| || | | || || |||| | | ||||||||||| ||
Sbjct 1212 AAAGACAGCCCCCAATGTATCAT-TGGGTGAAACAGTGAGGGCAAGGTTGAAGCAGTTCA 1270
Query 1159 CAGTGATGAACA-GATTCAAGAGAAA-AGCTTTGAGGGTTATTGC 1201
| || ||||||| | | ||||| || ||| | |||||||||||
Sbjct 1271 CCGTCATGAACAAGCT-CAAGA-AACGAGCACTCAGGGTTATTGC 1313
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 103111919430
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5