BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg485602 Length=555 Score E Sequences producing significant alignments: (Bits) Value AT3G52350.1 | Symbols: | D111/G-patch domain-containing protei... 710 0.0 AT5G08535.1 | Symbols: | D111/G-patch domain-containing protei... 407 6e-113 > AT3G52350.1 | Symbols: | D111/G-patch domain-containing protein | chr3:19409606-19410148 REVERSE LENGTH=543 Length=543 Score = 710 bits (384), Expect = 0.0 Identities = 502/557 (90%), Gaps = 16/557 (3%) Strand=Plus/Plus Query 1 ATGCAAGGAACAAAATCTCTGGCTTGTACACAGAGAGAAACGTCCGTTGTTCAGCTCCGA 60 |||||||||||| ||| |||||||||||| | |||||||||||||||||||||||||||| Sbjct 1 ATGCAAGGAACAGAATATCTGGCTTGTACTCGGAGAGAAACGTCCGTTGTTCAGCTCCGA 60 Query 61 AAGAGGCAAGGTTGGAAGGAAAGTACTGGTCTGGGAATCATCAAACAGGGACTAGGAGCA 120 ||||||||||||||||||||||||||| | ||||||||| |||||||||||| Sbjct 61 GAGAGGCAAGGTTGGAAGGAAAGTACTGATATGGGAATCACCAAACAGGGACT------- 113 Query 121 GAGACAAATATACAAAGGAGGAAGAAAACAGACAAGTCTCAGGCTACAACTTCTCCA-AA 179 | | |||||||||||||||||||||||| ||||| |||||||||| |||| || | Sbjct 114 G-G----TTATACAAAGGAGGAAGAAAACAGAAAAGTCCCAGGCTACAATTTCT-CACTA 167 Query 180 TAGTGAAAAAGTGTCCAGTGTTATTGGTGATTCTTCTGAATCAAGCAATTCATTGGCTGC 239 |||||||||||||||| ||||||||| ||||||||||||||||||||| ||| | |||| Sbjct 168 CAGTGAAAAAGTGTCCAATGTTATTGGGGATTCTTCTGAATCAAGCAATCCATCGACTGC 227 Query 240 TATCAATTCTTCTAACATTGGATTTCAGCTCCTAAAGAAGCATGGCTGGAAGGAAGGTAC 299 ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct 228 TATCAGTTCTTCTAACATTGGTTTTCAGCTCCTAAAGAAGCATGGCTGGAAGGAAGGAAC 287 Query 300 TGGTCTTGGAATCGCTGAACAAGGTATATTGGAGCCTCTACAAGCAGAGCCAAAACATAA 359 |||||| |||||| |||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct 288 TGGTCTAGGAATCACTGAACAAGGTATATTGGTGCCTCTACAAGCAGAACCAAAACATAA 347 Query 360 CAAACAAGGACTAGGATCTGAAAAACCAGCTAAGAGAAAAGCGGCACAGACTCAGGATAC 419 |||||||||||||||| ||||||||||||| ||||||||| |||||||| |||||||||| Sbjct 348 CAAACAAGGACTAGGAGCTGAAAAACCAGCCAAGAGAAAACCGGCACAGCCTCAGGATAC 407 Query 420 ATCTTCTGAAGAAGTATCAAAGAAGAGCAAGAAACTTTCTAAGAAATT-GCGGAAGATGA 478 | ||| |||||||||||||||||||||||||||||||||||||||||| | | ||||||| Sbjct 408 AGCTTTTGAAGAAGTATCAAAGAAGAGCAAGAAACTTTCTAAGAAATTAGTG-AAGATGA 466 Query 479 TTGAGCACGAAAAACGCTTAGCTGAAAACGAATTAGAACGAGCCTTCCGCAGGGAGTTCT 538 | |||||||||||||| || || ||||||||||| ||||||||||||||||||||||||| Sbjct 467 TCGAGCACGAAAAACGATTGGCGGAAAACGAATTTGAACGAGCCTTCCGCAGGGAGTTCT 526 Query 539 GGCCTGATAATATATAA 555 ||||||||||| ||||| Sbjct 527 GGCCTGATAATGTATAA 543 > AT5G08535.1 | Symbols: | D111/G-patch domain-containing protein | chr5:2762029-2763436 FORWARD LENGTH=788 Length=788 Score = 407 bits (220), Expect = 6e-113 Identities = 320/368 (87%), Gaps = 7/368 (2%) Strand=Plus/Plus Query 190 GTGTCCAGTGTTATTGGTGATTCTTCTGAATCAAGCAATTCATTGGCTGCTATCAATTCT 249 ||||| || ||||| ||||| || |||| |||||||| ||||||||||||||| ||||| Sbjct 310 GTGTCGAGCGTTATGGGTGAGTCCTCTGGATCAAGCAGTTCATTGGCTGCTATAAATTCG 369 Query 250 TCTAACATTGGATTTCAGCTCCTAAAGAAGCATGGCTGGAAGGAAGGTACTGGTCTTGGA 309 || |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 370 TCCAACATTGGGTTTCAGCTCCTAAAGAAGCATGGCTGGAAGGAAGGCACTGGTCTTGGA 429 Query 310 ATCGCTGAACAAGGTATATTGGAGCCTCTACAAGCAGAGCCAAAACATAACAAACAAGGA 369 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct 430 ATCGCTGAACAGGGTATATTGGTGCCTCTACAAGCAGAGCCAAAACATAACAAACGAGGA 489 Query 370 CTAGGATCTGAAA-AACCAGCTAAGAGAAAAGCGGCACAGACTCAGGATACATCTTCTGA 428 | ||| || ||| |||||||||||||||||| ||| ||| |||||| || | | || Sbjct 490 GTGGGAGCT-AAACAACCAGCTAAGAGAAAAGTGGCTCAGCCTCAGGCTA-AGGAT--GA 545 Query 429 AGAAGTATCAAAGAAGAGCAAGAAACTTTCTAAGAAATTGCGGAAGATGATTGAGCACGA 488 |||||| |||||| |||| ||||||||||| |||||| ||||||||||||| |||||||| Sbjct 546 AGAAGTCTCAAAGCAGAGTAAGAAACTTTCGAAGAAAATGCGGAAGATGATGGAGCACGA 605 Query 489 AAAACGCTTAGCTG-AAAACGAATTAGAACGAGCCTTCCGCAGGGAGTTCTGGCCTGATA 547 ||||| ||| | | |||| ||||| |||||||||||| |||||||||||||| |||| Sbjct 606 AAAACATTTA-CAGGAAAAAGAATTTGAACGAGCCTTCTTTAGGGAGTTCTGGCCCGATA 664 Query 548 ATATATAA 555 || ||||| Sbjct 665 ATGTATAA 672 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 26624097910 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5