BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg485646
Length=1766
Score E
Sequences producing significant alignments: (Bits) Value
AT3G52750.1 | Symbols: FTSZ2-2 | Tubulin/FtsZ family protein | ... 2603 0.0
AT2G36250.1 | Symbols: FTSZ2-1, ATFTSZ2-1 | Tubulin/FtsZ family... 1098 0.0
> AT3G52750.1 | Symbols: FTSZ2-2 | Tubulin/FtsZ family protein
| chr3:19549661-19553014 REVERSE LENGTH=1773
Length=1773
Score = 2603 bits (1409), Expect = 0.0
Identities = 1663/1783 (93%), Gaps = 28/1783 (2%)
Strand=Plus/Plus
Query 1 AATCCACTTTTATGTGATCGAGAAAGAGATTCTGAGCCCAGAAAACACCAAAA--TT-GG 57
||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct 1 AATCCACTTTTATGTGATCGAGAAAGAGATTCTAAGCCCAGAAAACACCAAAACCTTCCA 60
Query 58 TTCCCA-T--TT--C-TTTTCTTTTTATTTGTAGCTCGAAATCTCTTCTGCTG-CGCTAC 110
|| || | || | |||| ||||| ||||||||||| ||| || ||||||| | ||||
Sbjct 61 TTTTCATTGGTTCCCATTTT-TTTTTCTTTGTAGCTCG-AAT-TC-TCTGCTGCCACTAC 116
Query 111 TGGTAAGTGAAATTGGAGTTTTGAA-AAATCTTTGGTTGGTTCTGTGGTTTCAGAATGGC 169
| |||||||||||||||||||| || | ||||||||||| |||||| || ||||||||||
Sbjct 117 TCGTAAGTGAAATTGGAGTTTTTAATAGATCTTTGGTTGCTTCTGTAGTCTCAGAATGGC 176
Query 170 AGCTTATGTTTCTCCCTGTTTAACTCCTCCGGATTCTCGGGTGCTCACTGTTCTTCGAAA 229
|||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct 177 AGCTTATGTTTCTCCCTGTTTAACTCCTCCGGATTCTCGGGTACTCACTGTTCTTAGAAA 236
Query 230 GAGTGTGTTACCGGAAAATCATCTAGGCACCAGGGTTGGTTGCTTAAGAATGAGTGATGG 289
|||||||||||| || ||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 237 GAGTGTGTTACCTGATCATCATCTAGGCACGAGGGTTGGTTGCTTAAGAATGAGTGAAGG 296
Query 290 ---TACTAAAAGATATCGACTTGTTGCTGCTCATAAATCCGAGTCTTCGTCAATTAGAAA 346
||||||||||||||| |||||||| ||||||| | ||||||||||||||| |||||
Sbjct 297 TACTACTAAAAGATATCGTGTTGTTGCTTCTCATAAGTACGAGTCTTCGTCAATCAGAAA 356
Query 347 CTCTCTGAATTCTCATAGTCCAAGCCATTTCCAAAGCCAAGACTCTTTCTTGAATCTCCA 406
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 357 CTCTTTGAATTCTCATAGTACAAGCCATTTCCAAAGCCAAGACTCTTTCTTGAATCTCCA 416
Query 407 CCCTGAGATATCAATGCTCAACCCAAGAAAAGAAACTTCCAGTGTTCCCATTACTGAGGA 466
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 417 CCCTGAGATATCCATGCTCAACCCAAGAAAAGAAACTTCCAGTGTTCCCATTACTGAGGA 476
Query 467 TTTGGATGAGTTATCTACTCCAAACACTTATAATGAGGC-ACGGATAAAAGTTATCGGCG 525
|||||||||||||||||||||||||||||| |||||||| | |||| |||||||||||||
Sbjct 477 TTTGGATGAGTTATCTACTCCAAACACTTACAATGAGGCTA-GGATTAAAGTTATCGGCG 535
Query 526 TTGGAGGTGGTGGTTCAAACGCTGTGAATCGTATGATTGAGAGTGAGATGATTGGTGTGG 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 536 TTGGAGGTGGTGGTTCAAACGCTGTGAATCGTATGATTGAGAGTGAGATGATTGGTGTGG 595
Query 586 AGTTTTGGATTGTAAATACCGATATTCAAGCAATGAGAATGTCTCCGGTTTTCCCAGACA 645
||||||||||||| ||||||||||| |||||||||||||| ||||||||||| |||||||
Sbjct 596 AGTTTTGGATTGTGAATACCGATATCCAAGCAATGAGAATATCTCCGGTTTTTCCAGACA 655
Query 646 ATAGGTTACAGATTGGTAAGGAGTTGACTAGAGGTTTAGGTGCTGGAGGTAATCCTGAGA 705
|||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 656 ATAGGTTACAAATTGGTAAGGAGTTGACTAGGGGTTTAGGTGCTGGAGGTAATCCAGAGA 715
Query 706 TTGGAATGAATGCTGCTACAGAAAGCAAAGAAGCTATCCAAGAAGCGCTTTATGGTTCAG 765
|||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 716 TTGGGATGAATGCTGCTACAGAAAGCAAAGAAGCTATTCAAGAAGCACTTTATGGTTCAG 775
Query 766 ATATGGTCTTTGTCACAGCTGGAATGGGTGGTGGAACCGGCACAGGCGGGGCTCCTATAA 825
||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||
Sbjct 776 ATATGGTCTTTGTCACAGCTGGAATGGGTGGTGGAACTGGCACAGGTGGTGCTCCTATAA 835
Query 826 TTGCAGGGGTTGCAAAAGCGATGGGTATATTGACGGTTGGTATTGTCACAACGCCTTTCT 885
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 836 TTGCAGGGGTTGCAAAAGCGATGGGTATATTAACGGTTGGTATTGTGACAACGCCTTTCT 895
Query 886 CATTTGAGGGACGGAGAAGAGCAGTCCAGGCTCAGGAAGGGATTGCAGCCCTCAGAGATA 945
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 896 CATTTGAGGGACGGAGAAGAGCACTCCAGGCTCAGGAAGGGATTGCAGCCCTCAGAGATA 955
Query 946 ATGTTGACACTCTTATTGTTATTCCAAACGACAAGTTACTCGCAGCAGTCTCTCAGTCCA 1005
|||||||||| || |||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 956 ATGTTGACACCCTCATTGTTATTCCAAACGACAAGTTACTAGCAGCAGTCTCTCAGTCTA 1015
Query 1006 CTCCAGTTACAGAAGCATTTAATCTGGCAGATGATATACTTCGTCAAGGAGTCCGCGGAA 1065
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 1016 CTCCAGTTACAGAAGCATTTAATCTGGCAGATGATATACTTCGTCAAGGTGTCCGTGGAA 1075
Query 1066 TATCTGATATCATCACGATTCCTGGATTGGTCAATGTGGATTTTGCTGATGTGAGGGCTA 1125
|||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1076 TATCTGATATTATTACGATTCCTGGATTGGTCAATGTGGATTTTGCTGATGTGAGGGCGA 1135
Query 1126 TAATGGCAAATGCAGGTTCTTCGTTGATGGGAATAGGAACTGCAACAGGAAAGACTCGAG 1185
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 1136 TAATGGCAAATGCAGGTTCTTCATTGATGGGAATAGGAACTGCAACAGGAAAGACCCGAG 1195
Query 1186 CAAGAGATGCTGCATTAAACGCGATCCAATCACCTTTGTTAGATATTGGCATTGAGAGAG 1245
|||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||
Sbjct 1196 CAAGAGATGCTGCATTAAACGCAATCCAATCCCCTTTATTAGATATTGGCATTGAGAGAG 1255
Query 1246 CCACTGGAATTGTTTGGAACATAACTGGTGGAAGTGACTTAACCCTGTTCGAGGTAAATG 1305
|||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 1256 CCACTGGAATAGTTTGGAACATAACCGGTGGAAGTGACTTAACACTGTTCGAGGTAAATG 1315
Query 1306 CTGCTGCAGAAGTGATTTACGACCTTGTTGATCCGACAGCCAATCTTATATTTGGTGCTG 1365
||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||
Sbjct 1316 CTGCTGCAGAAGTGATTTACGACCTCGTTGATCCAACAGCGAATCTTATATTTGGTGCTG 1375
Query 1366 TGGTGGATCCATCCTATAGTGGTCAAATAAGTATTACCCTAATAGCAACCGGTTTCAAAC 1425
|||| |||||||| |||||||||||||||||||||||||| |||||||| || |||||||
Sbjct 1376 TGGTAGATCCATCTTATAGTGGTCAAATAAGTATTACCCTGATAGCAACTGGCTTCAAAC 1435
Query 1426 GCCAAGAAGAAGGAGAAGGGAGGCCACTTCAGGCGACGCAAGCGGATGCATCAGTGGGAG 1485
||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct 1436 GCCAAGAAGAAGGAGAAGGGAGGCCACTTCAGGCGACACAAGCGGATGCATCAATGGGAG 1495
Query 1486 CCACAAGACGTCCTTCTTCATCATTCACTGAAGGCAGTTCCATAGAGATCCCAGAGTTCT 1545
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1496 CCACAAGACGTCCTTCATCATCATTCACTGAAGGCAGCTCCATAGAGATCCCAGAGTTCT 1555
Query 1546 TGAAGAAGAAAGGTCGCTCTCGCTATCCTCGCCTCTAGATCCACTTTGATCACTCTAGAT 1605
| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 1556 TAAAGAAGAAAGGGCGCTCTCGCTATCCTCGCCTCTAGACCCACTTTGATCACTCTACAT 1615
Query 1606 AAGATTGTTGAATGTAAGGAGAAGGAATGATTTGGTGTGGCTATGTAAATTGCCTCTCTG 1665
| |||||||||||||||||||| ||||| ||||||| ||||||||||||||||||| ||
Sbjct 1616 GATATTGTTGAATGTAAGGAGAAAGAATG-TTTGGTGCGGCTATGTAAATTGCCTCTATG 1674
Query 1666 GTGAT-T-CTTTAATAGGTTGTTAGAAATGATTTTACTATAGTACTATAATAATGTTATT 1723
||||| | || |||||||||||||||||| ||||||||||| ||| | ||||||||||
Sbjct 1675 GTGATATTCTATAATAGGTTGTTAGAAATTATTTTACTATATTACAAAAATAATGTTA-- 1732
Query 1724 TGACTTGACAGATGATAAATCTCAGTCTCTGCCACTCTGTTTC 1766
||||||||||||||||||| |||||||| |||||||||||
Sbjct 1733 ---CTTGACAGATGATAAATCTTAGTCTCTGTCACTCTGTTTC 1772
> AT2G36250.1 | Symbols: FTSZ2-1, ATFTSZ2-1 | Tubulin/FtsZ family
protein | chr2:15197369-15200603 REVERSE LENGTH=1948
Length=1948
Score = 1098 bits (594), Expect = 0.0
Identities = 950/1123 (85%), Gaps = 19/1123 (2%)
Strand=Plus/Plus
Query 462 GAGGATTTGGATGAGTTATCTACTCC-A-AACACTTATAATGAGGC-ACGGATAAAAGTT 518
|||||||| || ||| |||| |||| | | || || |||||||| | |||| || |||
Sbjct 532 GAGGATTTTGAAGAGCCATCTGCTCCGAGTA-AC-TACAATGAGGCGA-GGATTAAGGTT 588
Query 519 ATCGGCGTTGGAGGTGGTGGTTCAAACGCTGTGAATCGTATGATTGAGAGTGAGATGAT- 577
|| || || ||||||||||| ||||| ||||||||||||||||| |||||||| ||| |
Sbjct 589 ATTGGTGTGGGAGGTGGTGGATCAAATGCTGTGAATCGTATGATAGAGAGTGAAATG-TC 647
Query 578 TGGTGTGGAGTTTTGGATTGTAAATACCGATATTCAAGCAATGAGAATGTCTCCGGTTTT 637
||||||||||| |||||||| || || ||||| || || |||||||||||||| |||||
Sbjct 648 AGGTGTGGAGTTCTGGATTGTCAACACTGATATCCAGGCTATGAGAATGTCTCCTGTTTT 707
Query 638 CCCAGACAATAGGTTACAGATTGGTAAGGAGTTGACTAGAGGTTTAGGTGCTGGAGGTAA 697
|| || ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||
Sbjct 708 GCCTGATAATAGGTTACAAATTGGTAAGGAGTTGACTAGGGGTTTAGGTGCTGGAGGAAA 767
Query 698 TCCTGAGATTGGAATGAATGCTGCTACAGAAAGCAAAGAAGCTATCCAAGAAGCGCTTTA 757
||| || || || ||||||||||||| ||| |||||||||| ||| ||||||| |||||
Sbjct 768 TCCAGAAATCGGTATGAATGCTGCTAGAGAGAGCAAAGAAGTTATTGAAGAAGCTCTTTA 827
Query 758 TGGTTCAGATATGGTCTTTGTCACAGCTGGAATGGGTGGTGGAACCGGCACAGGCGGGGC 817
||| |||||||||||||||||||||||||||||||| |||||||| ||||| || | ||
Sbjct 828 TGGCTCAGATATGGTCTTTGTCACAGCTGGAATGGGCGGTGGAACTGGCACTGGTGCAGC 887
Query 818 TCCTATAATTGCAGGGGTTGCAAAAGCGATGGGTATATTGACGGTTGGTATTGTCACAAC 877
||| |||||||||| |||| || ||||||||||||||||| |||||||||| ||| ||
Sbjct 888 CCCTGTAATTGCAGGAATTGCCAAGGCGATGGGTATATTGACAGTTGGTATTGCCACTAC 947
Query 878 GCCTTTCTCATTTGAGGGACGGAGAAGAGCAGTCCAGGCTCAGGAAGGGATTGCAGCCCT 937
||||||||| |||||||| || |||||| | || |||||||| |||||| ||||| | ||
Sbjct 948 GCCTTTCTCGTTTGAGGGTCGAAGAAGAACTGTTCAGGCTCAAGAAGGGCTTGCATCTCT 1007
Query 938 CAGAGATAATGTTGACACTCTTATTGTTATTCCAAACGACAAGTTACTCGCAGCAGTCTC 997
|||||| |||||||||||||| || || |||||||| |||||||| || |||| |||||
Sbjct 1008 CAGAGACAATGTTGACACTCTCATCGTCATTCCAAATGACAAGTTGCTTACAGCTGTCTC 1067
Query 998 TCAGTCCACTCCAGTTACAGAAGCATTTAATCTGGCAGATGATATACTTCGTCAAGGAGT 1057
|||||| ||||| || ||||||||||||||||| || ||||||||||| ||||| || ||
Sbjct 1068 TCAGTCTACTCCGGTAACAGAAGCATTTAATCTAGCTGATGATATACTCCGTCAGGGGGT 1127
Query 1058 CCGCGGAATATCTGATATCATCACGATTCCTGGATTGGTCAATGTGGATTTTGCTGATGT 1117
|| || |||||||||||||| ||||||||||| ||||| ||||||||||||||||||||
Sbjct 1128 TCGTGGGATATCTGATATCATTACGATTCCTGGTTTGGTGAATGTGGATTTTGCTGATGT 1187
Query 1118 GAGGGCTATAATGGCAAATGCAGGTTCTTCGTTGATGGGAATAGGAACTGCAACAGGAAA 1177
||| ||||||||||||||||| || ||||| |||||||||||||||||||| ||||||||
Sbjct 1188 GAGAGCTATAATGGCAAATGCGGGGTCTTCATTGATGGGAATAGGAACTGCGACAGGAAA 1247
Query 1178 GACTCGAGCAAGAGATGCTGCATTAAACGCGATCCAATCACCTTTGTTAGATATTGGCAT 1237
|| ||| |||||||||||||| |||| || |||||||| ||||||||||||||||| ||
Sbjct 1248 GAGTCGGGCAAGAGATGCTGCGCTAAATGCAATCCAATCTCCTTTGTTAGATATTGGGAT 1307
Query 1238 TGAGAGAGCCACTGGAATTGTTTGGAACATAACTGGTGGAAGTGACTTAACCCTGTTCGA 1297
|||||||||||||||||||||||||||||| ||||| ||||||||||| || |||| ||
Sbjct 1308 TGAGAGAGCCACTGGAATTGTTTGGAACATTACTGGCGGAAGTGACTTGACATTGTTTGA 1367
Query 1298 GGTAAATGCTGCTGCAGAAGTGATTTACGACCTTGTTGATCCGACAGCCAATCTTATATT 1357
||||||||||||||||||||| || || || ||||| ||||| || ||||||||||||||
Sbjct 1368 GGTAAATGCTGCTGCAGAAGTAATATATGATCTTGTCGATCCAACTGCCAATCTTATATT 1427
Query 1358 TGGTGCTGTGGTGGATCCATCC-TATAGTGGTCAAATAAGTATTACCCTAATAGCAACCG 1416
|||||||| || |||||| || | || |||||| |||| || ||||| ||||| || |
Sbjct 1428 CGGTGCTGTTGTAGATCCAGCCCTC-AGCGGTCAAGTAAGCATAACCCTGATAGCTACGG 1486
Query 1417 GTTTCAAACGCCAAGAAGAAGGAGAAGGGAGGC-CACTTCAGGCGACGCAAGCGGATGCA 1475
|||||||||| |||||||| |||||||| | | || ||||| | ||||| |||||
Sbjct 1487 GTTTCAAACGACAAGAAGAGGGAGAAGG-ACGAACAGTTCAGATGGTACAAGCAGATGCT 1545
Query 1476 ---TCAGTGGGAGCCACAAGACGTCCTTCTTCATCATTCACTGAAGGCAGTTCCA-TAGA 1531
||||| ||||| |||||| | || ||||| || || | ||| || |||| | | ||
Sbjct 1546 GCGTCAGTTGGAGCTACAAGAAGACCCTCTTCTTCCTTTAGAGAAAGCGGTTC-AGTGGA 1604
Query 1532 GATCCCAGAGTTCTTGAAGAAGAAAGGTC-GCTCTCGCTATCC 1573
||||||||||||||||||||||||||| | ||||||| |||||
Sbjct 1605 GATCCCAGAGTTCTTGAAGAAGAAAGG-CAGCTCTCGTTATCC 1646
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 87348948300
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5