BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg485669
Length=2100
Score E
Sequences producing significant alignments: (Bits) Value
AT3G52950.1 | Symbols: | CBS / octicosapeptide/Phox/Bemp1 (PB1... 3127 0.0
AT2G36500.1 | Symbols: | CBS / octicosapeptide/Phox/Bemp1 (PB1... 970 0.0
> AT3G52950.1 | Symbols: | CBS / octicosapeptide/Phox/Bemp1 (PB1)
domains-containing protein | chr3:19634455-19636819 FORWARD
LENGTH=2142
Length=2142
Score = 3127 bits (1693), Expect = 0.0
Identities = 1879/1969 (95%), Gaps = 11/1969 (1%)
Strand=Plus/Plus
Query 1 GGAAACAAGAACAACCAATGAAAATTCGATAAATGGCTGAACACAATTGTTAAGAGCCGT 60
||||||| |||||||||||||||| ||||||||||||| ||| |||||||||||||||||
Sbjct 1 GGAAACAGGAACAACCAATGAAAACTCGATAAATGGCTTAACTCAATTGTTAAGAGCCGT 60
Query 61 TTG-TTTTTGGCAACAAAAGTGCTCGAGACGA-AGAGGTTGAAGAAG-AGGAAGAAGAGA 117
||| ||||||||||||||||||||||||| || ||| ||||||||| | ||||||||||
Sbjct 61 TTGTTTTTTGGCAACAAAAGTGCTCGAGA-GAGAGACCTTGAAGAAGAAAGAAGAAGAGA 119
Query 118 CGAGTTTGATATCTAAAGGAATCATTTTTGACGGATTTAGGATCTAAGAAAACCCTAGAT 177
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 120 CGAGTTTGATATCTAAAGGAATCATTTTTGACGGATTTAGGATCTAAGTAAACCCTAGAT 179
Query 178 TGATTGAATATGAGTACTCAAGCGACGGGTCCTTCTTCAACATCAGGGAGGAGAAGCACT 237
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 180 TGACCGAATATGAGTACTCAAGCGACGGGTCCTTCTTCAACATCAGGGAGGAGAAGCAAT 239
Query 238 TCTAGTGTACGGCGAGGACCACCACCTTCTAAGAAACCAGTCCAATCAGAGAACGGAAGT 297
|||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 240 TCTACTGTACGGCGAGGACCACCACCTTCTAAGAAACCAGTACAATCAGAGAATGGAAGT 299
Query 298 GTCAATGGTAACACCTCTAAACCCAATTCACCTCCTCCGCAACCTCCATCTCAAGCTCCT 357
|| ||||| |||||||| |||||||||||||||||||| ||||||| |||||||||||||
Sbjct 300 GTTAATGGGAACACCTCAAAACCCAATTCACCTCCTCCTCAACCTCAATCTCAAGCTCCT 359
Query 358 TCTAATGGAGAGAGAACAGTGAAGAAGCTTCGGTTATCGAAAGCTCTCACTATTCCTGAA 417
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct 360 TCTAATGGAGAGAGAACAGTGAAGAAGCTTAGGTTATCGAAAGCTCTTACTATTCCTGAA 419
Query 418 GGAACTACTGTTTTCGATGCTTGTCGAAGGATGGCGGCTCGGCGTGTTGATGCTTGTTTG 477
||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||
Sbjct 420 GGAACTACTGTTTTCGATGCTTGTCGAAGAATGGCTGCTAGGCGTGTTGATGCTTGTTTG 479
Query 478 TTGACTGATTCAAGTGCGCTTCTTTCCGGGATTGTTACTGATAAAGATGTTGCTACAAGA 537
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 480 TTGACTGATTCAAGTGCGCTTCTTTCCGGGATTGTTACTGATAAAGATGTAGCTACAAGA 539
Query 538 GTGATTGCTGAAGGGTTGAGACCGGATCAAACTTTGGTCTCTAAGGTTATGACTAGGAAT 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 GTGATTGCTGAAGGGTTGAGACCGGATCAAACTTTGGTCTCTAAGGTTATGACTAGGAAT 599
Query 598 CCTATTTTTGTCACGTCTGATTCGTTGGCGCTTGAGGCTCTTCAGAAGATGGTTCAAGGG 657
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 CCTATTTTTGTTACTTCTGATTCGTTGGCGCTTGAGGCTCTTCAGAAGATGGTTCAAGGG 659
Query 658 AAATTTAGGCACTTGCCTGTTGTAGAGAATGGTGAAGTCATTGCTTTGTTGGATATTACA 717
|| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 660 AAGTTTAGACACTTGCCTGTTGTGGAGAATGGTGAAGTCATTGCTTTGTTGGATATTACA 719
Query 718 AAGTGTTTGTATGATGCTATTTCTAGGATGGAGAAAGCTGCAGAGCAAGGCAGTGCTTTA 777
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 720 AAGTGTTTGTATGATGCTATTTCTAGGATGGAGAAAGCTGCAGAGCAAGGTAGTGCTTTA 779
Query 778 GCAGCTGCAGTGGAAGGTGTGGAGAAGCAATGGGGAAGCGGATATTCTGCGCCCTATGCT 837
|| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 780 GCTGCTGCAGTGGAAGGTGTGGAGAAGCAATGGGGAAGCGGATATTCTGCACCGTATGCT 839
Query 838 TTCATTGAAACCTTGAGGGAGAGAATGTTTAAGCCCGCCTTGTCAACGATTATCACAGAA 897
|||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 840 TTCATTGAAACCTTGAGGGAGAGAATGTTTAAACCCGCCTTGTCAACGATTATTACAGAC 899
Query 898 AATTCAAAGGTTGCACTTGTAGCACCATCAGATCCTGTTAGTGTTGCTGCGAAACGGATG 957
||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct 900 AATTCGAAGGTTGCACTTGTAGCACCATCAGATCCTGTTTCAGTTGCTGCGAAAAGGATG 959
Query 958 CGAGATTTGCGGGTTAACTCTGTTATCATTTCCATGGGGAACAAGATCCA-TGGAATCTT 1016
| |||||||||||||||||||| |||||||||| ||||||||| || || |||||||||
Sbjct 960 AGGGATTTGCGGGTTAACTCTGTAATCATTTCCACGGGGAACAAAAT-CAGTGGAATCTT 1018
Query 1017 GACTTCAAAGGACATTCTGATGCGAGTGGTGGCACAAAATTTACCTCCTGAATTGACTCT 1076
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1019 GACTTCAAAGGACATTCTGATGCGAGTGGTGGCACAAAATTTATCTCCTGAATTGACTCT 1078
Query 1077 TGTTGAGAAGGTAATGACACCGAATCCTGAATGTGCATCGCTAGAGACAACGATTCTGGA 1136
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1079 TGTCGAGAAGGTAATGACACCGAATCCTGAATGTGCATCGCTAGAGACAACGATTCTGGA 1138
Query 1137 TGCGTTGCATATAATGCATGATGGGAAGTTTCTACATCTTCCAATTATAGATAAAGACGG 1196
||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 1139 TGCGTTGCATACAATGCATGATGGAAAGTTTCTACATCTTCCAATTATAGATAAAGATGG 1198
Query 1197 ATCAGCTGCAGCTTGTGTAGACGTTCTTCAGATTACTCACGCAGCTATTTCAATGGTCGA 1256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1199 ATCAGCTGCAGCTTGTGTAGACGTTCTTCAGATTACTCACGCAGCTATTTCAATGGTGGA 1258
Query 1257 GAACAGTTCTGGAGCTGTGAATGATATGGCGAACACGATGATGCAGAAATTCTGGGATTC 1316
|||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||
Sbjct 1259 GAACAGTTCTGGAGCTGTAAATGATATGGCAAACACGATGATGCAGAAATTTTGGGATTC 1318
Query 1317 AGCTCTTGCGTTAGAGCCACCAGATGATTCTGACACTCAAAGTGAAATGTCGGCAATGAT 1376
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1319 AGCTCTTGCGTTAGAGCCACCTGATGATTCTGACACTCAAAGTGAAATGTCGGCAATGAT 1378
Query 1377 GCATCATTCAGATATAGGGAAGCTCAGTTCTTACCCATCTCTAGGACTCGGGAATTCATT 1436
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 1379 GCATCATTCAGATATAGGGAAGCTCAGTTCTTACCCATCTCTAGGACTAGGGAATTCGTT 1438
Query 1437 TTCATTCAAATTCGAAGACCTTAAGGGCCGTGTACATCGGTTTACTTCCGCAGCTGAAAA 1496
||| |||||||| ||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 1439 TTCGTTCAAATTTGAAGACCTTAAGGGCCGTGTACATCGGTTTACTTCTGGAGCTGAAAA 1498
Query 1497 CCTCGAAGAGCTGATGGGTATTGTGATGCAAAGAATTGGCAGCGACAACAATGATGTGGA 1556
|||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 1499 CCTCGAAGAGCTGATGGGTATTGTGATGCAAAGAATTGGCAGCGACAATAACAATGTGGA 1558
Query 1557 ACAACGGCCTCAGATTATATATGAGGACGATGAAGGTGATAAGGTATTGATTACATCGGA 1616
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1559 ACAACGGCCTCAGATTATATATGAGGACGATGAAGGTGATAAGGTTTTGATTACATCGGA 1618
Query 1617 CAGCGATTTGGTTGGTGCTGTTACTCTTGCTAGATCTACAGGACAAAAGGTTTTGAGGCT 1676
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1619 TAGCGATTTGGTTGGTGCTGTTACTCTTGCTAGGTCTACAGGACAAAAGGTTTTGAGGCT 1678
Query 1677 GCATCTGGACTTCACTGAGTCAACAAGGAGCTTGAGCTCAGAAACCACCCAACTCAAGAA 1736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1679 GCATCTGGACTTCACTGAGTCAACAAGGAGCTTGAGCTCAGAAACCACCCAACTCAAGAA 1738
Query 1737 AGGGGATTCTAGAGATAAAGGAAGCGGATGGGTTTCATGGCGTGGTGGTGTGGTGGTTAC 1796
||| |||||| |||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1739 AGGTGATTCTCGAGACAGAGGAAGCGGATGGGTTTCATGGCGTGGTGGTGTGGTGGTTAC 1798
Query 1797 AGGAGCTGTTGTCCTAACAAGCATAGCCATAGTTGTTTACTTGAAGCGTTCAAAGATCTG 1856
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1799 AGGAGCTGTTGTCCTAACAAGCATAGCCATAGTTGTTTACTTGAAGCGTTCAAAGAACTG 1858
Query 1857 ATTTTTGCTGAAGCAAACTGTTTTGGAGGCAGAACAAAA-Ctttttttct-ttg-ttttt 1913
||||||||||||||||||||||| ||| ||||||||||| || ||||||| || |||||
Sbjct 1859 ATTTTTGCTGAAGCAAACTGTTTGGGATGCAGAACAAAAACTCTTTTTCTCTTAATTTTT 1918
Query 1914 tggtaagtttcatacagtttgtctcttttgtcttttgGGGTTACATGTT 1962
||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct 1919 TGGTAAGTTTCATACAGTTTGTCTCTT--GTCTTTTGGGGTCACATGTT 1965
Score = 187 bits (101), Expect = 3e-46
Identities = 128/141 (91%), Gaps = 1/141 (1%)
Strand=Plus/Plus
Query 1961 TTGTGTCCCAAAGATATTAAATTAAAGGGGAAAAACCCTATTCAGATTAGTCAATTTGAC 2020
|||| |||| | ||||||||||||| ||||||||||| ||||||||||| || |||||||
Sbjct 2000 TTGTTTCCCTATGATATTAAATTAATGGGGAAAAACCTTATTCAGATTACTCTATTTGAC 2059
Query 2021 AGAGTTTATGTAAAACCTCTGAAACCGAGAAAATAAAACCAGG-AATATCATTGCACTAC 2079
||||||||||||||||||||||||||| ||||||||| | ||| |||||||||||||| |
Sbjct 2060 AGAGTTTATGTAAAACCTCTGAAACCGGGAAAATAAATCAAGGGAATATCATTGCACTGC 2119
Query 2080 AGATTCTGGTATTTGATATAA 2100
|||||||||| ||||||||||
Sbjct 2120 AGATTCTGGTCTTTGATATAA 2140
> AT2G36500.1 | Symbols: | CBS / octicosapeptide/Phox/Bemp1 (PB1)
domains-containing protein | chr2:15318028-15320152 FORWARD
LENGTH=1845
Length=1845
Score = 970 bits (525), Expect = 0.0
Identities = 1100/1367 (80%), Gaps = 81/1367 (6%)
Strand=Plus/Plus
Query 357 TTCTAATGGAGAGAGAACAGTGAAGAAGCTTCGGTTATCGAAAGCTCTCACTATTCCTGA 416
|||| |||| ||||||||||| |||||||| |||||||| ||||||||||||||| |||
Sbjct 330 TTCTGATGGCGAGAGAACAGTCAAGAAGCTACGGTTATCCAAAGCTCTCACTATTAATGA 389
Query 417 AGGAACTACTGT-TTTCGATGCTTGTCGAAGGATGGCGGCTCGGCGTGTTGATGCTTG-T 474
||||| ||||| ||| |||||||||||||||||||| ||| ||||||||||||| | |
Sbjct 390 GGGAACCACTGTCTTT-GATGCTTGTCGAAGGATGGCTGCTAGGCGTGTTGATGC-GGTT 447
Query 475 TTGTTGACTGATTCAAGTGCGCTTCTTTCCGGGATTGTTACTGATAAAGATGTTGCTACA 534
||||| ||||||||||| || ||||||||||| |||||||| || |||||| | || ||
Sbjct 448 TTGTTAACTGATTCAAGCGCTCTTCTTTCCGGTATTGTTACAGACAAAGATATAGCCACG 507
Query 535 AGAGTGATTGCTGAAGGGTTGAGACCGGATCAAACTTTGGTCTCTAAGGTTATGACTAGG 594
|| |||||||| |||||||||||||| || || ||| |||| ||||| || ||||| |||
Sbjct 508 AGGGTGATTGCAGAAGGGTTGAGACCAGAGCATACTCTGGTGTCTAAAGTCATGACAAGG 567
Query 595 AATCCTATTTTTGTCACGTCTGATTC-GTTGGCGC-TTGAGGCTCTTCAGAAGATGGTTC 652
||||| ||||||||||| |||||||| || || | ||||||||||||||||||||||||
Sbjct 568 AATCCCATTTTTGTCACATCTGATTCACTT-GC-CATTGAGGCTCTTCAGAAGATGGTTC 625
Query 653 AAGGGAAA-TTTAGGCACTTGCCTGTTGTAGAGAATGGTGAAGTCATTGCTTTGTTGGAT 711
||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 626 -AGGGAAAGTTCAGGCACTTGCCTGTTGTAGAGAATGGTGAAGTCATTGCTTTGTTGGAT 684
Query 712 ATTACAAAGTGTTTGTATGATGCTATTTCTA-GGATGGAGAAAGCTGCAGAGCAAGGCAG 770
|| ||||||||| | ||||||||||| || | ||||||| ||||||||||||||||| ||
Sbjct 685 ATCACAAAGTGTCTCTATGATGCTATCTC-ACGGATGGAAAAAGCTGCAGAGCAAGGAAG 743
Query 771 TGCTTTAGC-AGCTGCAGTGGAAGGTGTGGAGAAGCAATGGGGAAGCGGATATTCTGCGC 829
||||||||| | |||||||||||| || || |||||||| ||| | | | |||
Sbjct 744 TGCTTTAGCTA-CTGCAGTGGAAGAAC-GG-----CATTGGGGAAGTGGAAACT-T-CGC 794
Query 830 CCTATGCTTTCATTGAAACCTTGAGGGAGAGAATGTTTAAGCCCGCCTTGTCAACGATTA 889
| | | |||||| || ||||| ||||| ||||| ||||| || |||||||| || |
Sbjct 795 --T-T--T--CATTGATACATTGAGAGAGAGGATGTTCAAGCCTGCATTGTCAACTAT-A 846
Query 890 -TCACAGAAAATTC-AAAGGTTGCACTTGTAGCACCATCAGATCCTGT-TAGTGTTGCTG 946
|||| || ||| | |||| ||||||||||| || ||||||||||||| | ||| |||
Sbjct 847 GTCACTGAGAATACCAAAG-TTGCACTTGTATCAGCATCAGATCCTGTCTT-TGTAGCTT 904
Query 947 CGAAACGGATGCGAGATTTGCGGGTTAACTCTGTTATCATTTCCATGGGGAACAAGATCC 1006
| ||| |||||| |||||||||||||||||||| ||||| | | ||||||||||| |
Sbjct 905 CCAAAAAGATGCGTGATTTGCGGGTTAACTCTGTGATCATCGCGGTTGGGAACAAGATTC 964
Query 1007 ATGGAATCTTGACTTCAAAGGACATTCTGATGCGAGTGGTGGCACAAAATTTACCTCCTG 1066
|||| || || ||||||||||||||||| ||| |||| || ||||| ||| || ||||||
Sbjct 965 ATGGGATTTTAACTTCAAAGGACATTCTCATGAGAGTTGTAGCACAGAATCTATCTCCTG 1024
Query 1067 AATTGACTCTTGTTGAGAAGGTAATGACACCGAATCCTGAATGTGCATCGCTAGAGACAA 1126
| ||||||||||||| ||||||||||| || ||||||||||||||||| |||||||||
Sbjct 1025 AGCTGACTCTTGTTGAAAAGGTAATGACGCCAAATCCTGAATGTGCATCAATAGAGACAA 1084
Query 1127 CGATTCTGGATGCGTTGCATATAATGCATGATGGGAAGTTTCTA-CATCTTCCAATTATA 1185
| || || ||||| |||||||||||||||||||||||||| || ||||| || || |
Sbjct 1085 CAATCCTCGATGCATTGCATATAATGCATGATGGGAAGTT-CTTGCATCTGCCGGTTTTC 1143
Query 1186 GATAAAGACGGAT-CAGCTGCAGCTTGTGTAGACGTTCTTCAGATTACTCACGCAGCTAT 1244
||||||||||||| | || | ||||||| ||||||| || ||||| ||||||||||||||
Sbjct 1144 GATAAAGACGGATTC-GCCGTAGCTTGTTTAGACGTGCTGCAGATAACTCACGCAGCTAT 1202
Query 1245 TTCAATGGTCGAGAACA---GTTCTGGAGCTGTGAATGATATGGCGAACACGATGATGCA 1301
|||| ||| ||||||| | || |||||||| || ||||||||||| || ||||||||
Sbjct 1203 ATCAACGGTTGAGAACAACAGCTCAGGAGCTGTTAACGATATGGCGAATACAATGATGCA 1262
Query 1302 GAAA-TTCTGGGATTCAGCTCTTGCGTTAGAGCCACCAGATGATT-CTGACACTCAAAGT 1359
||| |||||||| ||||||||||||||||| ||||| || |||| | || || || ||
Sbjct 1263 -AAAGTTCTGGGACTCAGCTCTTGCGTTAGAACCACCTGAGGATTAC-GAAACACACAGC 1320
Query 1360 GAAATGTCGGCAATGATGCATCA-TTCAGATATAGGGAAGCTCAGTTCTTACCCATCTCT 1418
|| ||||| |||||| || || | |||||| | ||||||| ||| | | ||||| |
Sbjct 1321 GATATGTCAGCAATGCTG-ATAAATTCAGA-A--GGGAAGC--AGT-CGTGTCCATCACA 1373
Query 1419 AGGACTCGGGAATTCATTTTCATTCAAATTCGAAGACCTTAA-GGGCCGTGTACATCGGT 1477
|||||| | || || ||| | |||||||||||||| | ||| ||| | ||||| ||||
Sbjct 1374 AGGACTTGTGAGCTCGTTTGCTTTCAAATTCGAAGATCGTAAAGGGA-GAGTACAGCGGT 1432
Query 1478 TTA-CTTCCGCAGCTGAAAACCTCGAAGAGCTGATGGGTATTGTGATGCAAAGAAT-TGG 1535
||| || | | | ||| | | |||||||||||| || |||||||||||||| | ||
Sbjct 1433 TTAACT-CAACTGGTGAGAGTTTTGAAGAGCTGATGAGTGTTGTGATGCAAAGA-TGTGA 1490
Query 1536 CAGCGACAACAATGATGTGGAACAACGGCCT-CAGATTATATATGAGGACGATGAAGGTG 1594
|||| ||| | || ||||| ||||| || || | || ||||||||||
Sbjct 1491 -AGCG--------GAT-T----CA--GGCCTTCAGATAATGTACCAAGATGATGAAGGTG 1534
Query 1595 ATAAGGTATTGATTACATCGG-ACAGCGAT-TTGGTTGGTGCTGTTACTCTTGCTAGATC 1652
|||| || ||||||| | || |||| ||| ||| ||| |||||| ||| ||||||| ||
Sbjct 1535 ATAAAGTTTTGATTAG-TAGGGACAGTGATCTTG-TTGCTGCTGTAACTTTTGCTAGGTC 1592
Query 1653 TACAGGACAAAAGGTTTTGAGGCTGCATCTGGACTTCACTGAGTCAA 1699
| || |||||||||||| | || ||||| || || || ||| |||
Sbjct 1593 TTTGGGGCAAAAGGTTTTGCGACTACATCTTGATTTTACCGAGACAA 1639
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 104115930330
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5