BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg485729
Length=2610
Score E
Sequences producing significant alignments: (Bits) Value
AT3G53510.1 | Symbols: | ABC-2 type transporter family protein... 4067 0.0
AT2G37360.1 | Symbols: | ABC-2 type transporter family protein... 1760 0.0
AT2G37362.1 | Symbols: | Potential natural antisense gene, loc... 1650 0.0
AT3G55090.1 | Symbols: | ABC-2 type transporter family protein... 263 7e-69
> AT3G53510.1 | Symbols: | ABC-2 type transporter family protein
| chr3:19837209-19839862 REVERSE LENGTH=2654
Length=2654
Score = 4067 bits (2202), Expect = 0.0
Identities = 2496/2636 (95%), Gaps = 28/2636 (1%)
Strand=Plus/Plus
Query 1 TTTTTTACAGAGTACCTTAAGCCCCAAGAAAAAATACATACAATAATGGAAAAATGTGGA 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 13 TTTTTTACAGAGTACCTTAAGCCCCAAGAAAAAATACATACAATAACGGAAAAATGTGGA 72
Query 61 TGGATTTGCCCAACTCCTCACCTACTCTTAACTT-CAATGTATATACATACGAAAATATA 119
||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||
Sbjct 73 TGGATTTGCCCAACTCCTCACCTACTCGTAACTTACAATTTATATACATACGAAAATATA 132
Query 120 AACAAAAGATATGT--ATGTATATGTCAAAAGCTACAAAACCCAAAACAACTCAAAGTTA 177
|||||||| ||||| ||||| || | ||||||||||||||||| |||||||||||||||
Sbjct 133 AACAAAAGCTATGTACATGTAAATATGAAAAGCTACAAAACCCAGAACAACTCAAAGTTA 192
Query 178 GATACTTAGAGATCACCAAACTAATTGACAAGTCTCTCTTTCATTCTTCCATCCAAATAT 237
||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||
Sbjct 193 GATACTTAGAGATCACCAAACTAATTGACAAGTTTCTCCCTCATTCTCCCATCCAAATAT 252
Query 238 CCTATAAAGTCGATCAAAATTGTTCTGTGGGTAAAGACCTTTAGACACATTACCTGAGGC 297
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 253 CCTATAAAGTCGATCAAAATTGTTCTGTGGGT-AAGACCTTTAGACACATTACCTGAGGC 311
Query 298 CAAAACATTAACCAGACAATAATTTACATGATGTCTGGTTTGTTCGGTAAATTATCTCCG 357
|||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||
Sbjct 312 CAAAACATTAACCAGACAATAATTCACGTGATGTCTGGTTTGTTCGGTATATTATCTCCG 371
Query 358 TCCAGACGGGTCAATGGCGATGACCTCCCTCTGTTTTACAATATCCATAAGTCAGTGGAG 417
||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct 372 GCCAAACGGGTCAATGGCGATGGCCTCCCTCTGTTTTACAATATCCACAAGTCAGTGGAG 431
Query 418 CTTCAGAGATGTCAGAGAGACACGGCGCGGGTGTCTGTCACACTTGCAGAACTTCTCATG 477
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 432 CTTCAGAGATGTCACAGAGACACTGCGCGGGTGTCTGTCACACTTGCAGAACTTCTCATG 491
Query 478 AGTGTGGAAGATGAGGGGGATGACCACAGTCGGGCTTTGGATGTTGCAGTTGCCTCCAAT 537
|||||||||||||||||||||||||| ||||||||| ||||| |||| ||||| ||||||
Sbjct 492 AGTGTGGAAGATGAGGGGGATGACCAGAGTCGGGCTATGGATATTGCGGTTGCGTCCAAT 551
Query 538 TTCTGGGCCTCGGTTCCGTCTTCTTGCGTGCCTTCTTCTTCTCCGTTTGTTCTTTCCTTC 597
|||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct 552 TTCTGGTCCTCGGTTCCGTCTTCTCGTGTGCCTTCTTCTTCTCCGTTTGTTCTTTCCTTC 611
Query 598 AAAGACTTGACTTATAGTGTGAAGATCCAGAAGAAGTTTAAGCCCTTCCCCTGTTGCGGT 657
|||||||||||||| || ||||||||| ||||||||||||||||||| || ||||| ||
Sbjct 612 AAAGACTTGACTTACAGCGTGAAGATCAAGAAGAAGTTTAAGCCCTTTCCTTGTTGTGG- 670
Query 658 G-ATTCGCC--TT--T--TAATGGTATGGAGATGAATACTAAGGTGCTGCTGAATGGTAT 710
| |||| || || | ||||| |||||||||||||||||||||||| |||||||||||
Sbjct 671 GAATTCACCTTTTGATGGTAATGATATGGAGATGAATACTAAGGTGCTCCTGAATGGTAT 730
Query 711 TTCTGGTGAAGCTCGGGAAGGAGAGATGATGGCCGTTCTTGGAGCGAGCGGGTCAGGGAA 770
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 731 TTCTGGTGAAGCCCGGGAAGGAGAGATGATGGCTGTTCTTGGAGCGAGCGGGTCAGGGAA 790
Query 771 ATCAACCCTTATCGATGCATTAGCCAATCGGATTTCAAAAGAGAGCCTACGTGGTGATAT 830
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 791 ATCAACGCTTATCGATGCATTAGCCAATCGGATTTCAAAAGAGAGCCTACGCGGTGATAT 850
Query 831 TACTTTAAACGGGGAAGTTCTTGAATCCAGCCTGCATAAAGTCATATCGGCTTATGTGAT 890
||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 851 TACTTTAAATGGGGAAGTTCTTGAATCTAGCCTGCATAAAGTCATATCAGCTTATGTGAT 910
Query 891 GCAAGATGATCTTCTGTTCCCGATGCTCACCGTGGAAGAAACTTTGATGTTTTCTGCTGA 950
||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||
Sbjct 911 GCAAGATGATCTTCTCTTCCCGATGCTCACCGTGGAAGAGACGTTGATGTTTTCTGCTGA 970
Query 951 GTTCAGGCTTCCAAGCTCGCTTTCTAAGAAGAAAAAGAAAGCACGGGTTCAAGCTCTGAT 1010
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 971 GTTCAGGCTTCCAAGCTCGCTTTCTAAGAAGAAAAAGAAGGCACGGGTTCAAGCTCTGAT 1030
Query 1011 TGATCAGCTCGGCCTGAGAAACGCAGCAAAAACCGTGATCGGTGATGAGGGGCACAGAGG 1070
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 1031 TGATCAGCTCGGCCTGAGGAACGCAGCAAAAACCGTGATCGGTGATGAGGGACACAGAGG 1090
Query 1071 TGTGTCTGGAGGAGAAAGGAGACGGGTGTCAATTGGAACCGATATAATCCATGATCCGAT 1130
|||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||
Sbjct 1091 TGTGTCTGGAGGAGAAAGGAGAAGGGTCTCAATTGGAACCGATATAATCCATGACCCGAT 1150
Query 1131 TATCCTCTTTCTTGATGAGCCAACCTCAGGTCTCGACTCTACCAGTGCATACATGGTTGT 1190
||| |||||||| ||||||||||| || ||||| ||||||||||||||||||||||||||
Sbjct 1151 TATTCTCTTTCTCGATGAGCCAACTTCTGGTCTTGACTCTACCAGTGCATACATGGTTGT 1210
Query 1191 CAAAGTGCTTCAGAGAATCGCACAAAGCGGCAGCATAGTTATCATGTCCATCCATCAGCC 1250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1211 CAAAGTGCTTCAGAGAATCGCACAAAGCGGCAGCATAGTTATCATGTCCATCCATCAGCC 1270
Query 1251 GAGTTACAGAATCTTGGGCTTACTCGATAAGTTAATCTTCCTATCTAGGGGAAACACCGT 1310
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1271 GAGTTACAGAATCTTGGGATTACTCGATAAGTTAATCTTCCTATCTAGGGGAAACACCGT 1330
Query 1311 TTACAGCGGCTCCCCAACACATCTCCCTCGGTTCTTCTCGGAATTCGGTCACCCAATTCC 1370
||||||||||||||| ||||| ||||||| ||||||||| ||||||||||||||||||||
Sbjct 1331 TTACAGCGGCTCCCCGACACACCTCCCTCAGTTCTTCTCAGAATTCGGTCACCCAATTCC 1390
Query 1371 TGAAAACGAGAACAAGCCAGAGTTCGCACTCGATCTTATCCGTGAGCTAGAAGATTCTCC 1430
|||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| ||
Sbjct 1391 TGAAAACGAGAACAAGCCGGAGTTTGCACTCGATCTTATCCGTGAGCTGGAAGATTCGCC 1450
Query 1431 AGAAGGAACCAAAGCCCTAGTCGAGTTCCACAAGCAATGGCGAGCAAAGCAAACCTCAAG 1490
||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1451 AGAAGGAACGAAATCCTTAGTCGAGTTCCACAAGCAATGGCGAGCAAAGCAAACCTCAAG 1510
Query 1491 CCAGAGCAGAAGAAACACCAATGTATCTCTCAAAGATGCAATCAGCGCAAGTATCTCCAG 1550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1511 CCAGAGCAGAAGAAACACCAATGTATCTCTCAAAGATGCAATCAGCGCAAGTATCTCGAG 1570
Query 1551 AGGCAAACTTGTCTCCGGAGCAACAAACCTAAGATCATCATTTCAAACCTTTGCAAACCC 1610
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1571 AGGTAAGCTTGTCTCCGGAGCAACAAACCTAAGATCATCATTTCAAACCTTTGCAAACCC 1630
Query 1611 ATTCTGGACTGAAATGCTCGTGATTGGCAAACGATCTATACTAAACTCAAGAAGACAACC 1670
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 1631 ATTCTGGACTGAAATGCTCGTAATTGGTAAACGATCTATACTAAACTCAAGAAGACAACC 1690
Query 1671 AGAGCTATTCGGAATGCGCCTCGGAGCTGTTCTAGTCACCGGAATCATCCTAGCCACAAT 1730
||||||||||||||| ||||| |||||||| |||||||||||||| ||||||||||||||
Sbjct 1691 AGAGCTATTCGGAATCCGCCTAGGAGCTGTACTAGTCACCGGAATGATCCTAGCCACAAT 1750
Query 1731 ATTCTGGAAACTAGACAATTCACCAAGAGGTATACAAGAACGTTTAGGGTTCTTCGCATT 1790
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1751 ATTCTGGAAACTAGACAATTCACCAAGAGGTATACAAGAACGCTTAGGGTTCTTCGCATT 1810
Query 1791 CGCAATGTCCACAACATTCTACACCTGTGCAGAAGCAATACCAGTCTTTCTACAAGAACG 1850
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 1811 CGCAATGTCCACAACATTCTACACATGTGCAGAAGCAATACCAGTCTTTCTACAGGAACG 1870
Query 1851 CTACATATTCATGAGAGAAACAGCTTACAACGCTTACCGGCGATCATCATACGTCCTCGC 1910
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1871 TTACATATTCATGAGAGAAACAGCTTACAACGCTTACCGGCGATCATCATACGTCCTCGC 1930
Query 1911 TCACACAATAATCTCAATCCCTGCTCTAATAATCTTATCCGCCGCCTTCGCCGCCACAAC 1970
||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| ||||
Sbjct 1931 TCACACAATAATCTCCATCCCTGCTCTCATAATCTTATCCGCCGCATTCGCCGCCTCAAC 1990
Query 1971 ATTCTGGGCCGTAGGACTCGCCGGAGGCTCCGAAGGCTTCCTCTTCTTCTTCTTCACAAT 2030
||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 1991 ATTCTCGGCCGTAGGACTCGCCGGAGGCTCCGAGGGATTCCTCTTCTTCTTCTTCACAAT 2050
Query 2031 CCTCACAGCGTTTTGGGCCGGAAGCTCCTTCGTGACATTCTTATCCGGCGTAGTCTCACA 2090
|||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 2051 CCTCACCGCGTTTTGGGCCGGAAGTTCCTTCGTGACGTTCTTATCCGGCGTAGTCTCACA 2110
Query 2091 CGTGATGATCGGATTCACGGTGGTTGTAGCAATCCTCGCATATTTCCTCCTCTTCTCCGG 2150
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2111 CGTGATGATCGGATTCACGGTGGTTGTAGCAATCCTCGCTTATTTCCTCCTCTTCTCCGG 2170
Query 2151 ATTCTTCATCTCCAGAGATCGAATCCCAGTCTACTGGATCTGGTTCCATTACCTCTCCCT 2210
|||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2171 ATTCTTCATCTCTAGAGATCGAATCCCACTCTACTGGATCTGGTTCCATTACCTCTCCCT 2230
Query 2211 AGTGAAATACCCTTACGAAGGTGTTCTACAGAACGAATTCGAAGATCCGACGAAATGCTT 2270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2231 AGTGAAATACCCTTACGAAGGTGTTCTACAGAACGAATTCGAAGATCCGACGAAATGCTT 2290
Query 2271 CATCCGTGGGATCCAAATGTTCGACAATTCGCCGCTGGGACAAGTTCCGGCCGCCGTGAA 2330
| || | |||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2291 CGTCAGAGGGATCCAGATGTTCGACAATTCGCCGCTGGGACAAGTTCCAACCGCCGTGAA 2350
Query 2331 AATCAGCCTCCTGAAGAGCATGAGCGGCGTTTTGGGGATCAACGTGACGGCGGAGACTTG 2390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2351 AATCAGCCTCCTGAAGAGCATGAGCGGCGTTTTGGGGATCAACGTGACGGCGGAGACTTG 2410
Query 2391 CGTAACGACGGGAATCGACATTCTGAAGCAACAAGGAATCACTGAGATTAGCAAATGGAA 2450
|||||||||||||||||| || ||||| || ||||||||||| ||||| |||||||||||
Sbjct 2411 CGTAACGACGGGAATCGATATACTGAAACAGCAAGGAATCACGGAGATAAGCAAATGGAA 2470
Query 2451 TTGCTTGTGGATCACTGTAGCTTGGGGATTCTTCTTTAGGGTTCTCTTCTACTTCACACT 2510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2471 TTGCTTGTGGATCACTGTAGCTTGGGGATTCTTCTTTAGGGTTCTCTTCTACTTCACACT 2530
Query 2511 CTTGATCGGAAGCAAGAACAAGCGTCGCTGATTTA------------TTA---GAGTAAC 2555
||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 2531 CTTGATCGGAAGCAAGAACAAGCGTCGCTGATTTACAAAACAGAAAATTATTAGAGTAAC 2590
Query 2556 TA-ACCAATGATTATGATGTACTTAATACTTATGATTAATACAAAATTACATATGT 2610
| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 2591 TTGACCAATGATTATGATGTACTTAATACTTATGATTAATACGAAATTGCATATGT 2646
> AT2G37360.1 | Symbols: | ABC-2 type transporter family protein
| chr2:15673442-15675920 REVERSE LENGTH=2479
Length=2479
Score = 1760 bits (953), Expect = 0.0
Identities = 1672/2012 (83%), Gaps = 78/2012 (4%)
Strand=Plus/Plus
Query 571 TCTTCTTCTCCGTTTGTTCTTTCCTTCAAAGACTTGACTTATAGTGTGAAGATCCAGAAG 630
|||||||| |||||||||||||| |||| |||||||| || || |||||||||||||||
Sbjct 372 TCTTCTTCCCCGTTTGTTCTTTCATTCACTGACTTGACCTACAGCGTGAAGATCCAGAAG 431
Query 631 AAGTTTAAGCCCTTCCCCTGTTGCGGTGATTCGCCTTTTAATG-GT-ATGGAGATGAATA 688
|||||||| ||| || | || ||| || | | |||| | | | | |||| |
Sbjct 432 AAGTTTAATCCCCTCGCTTGCTGC--AGA-AGGTCAGGAAATGATTCCTCG-G-TGAACA 486
Query 689 CTAAGGTGCTGCTGAATGGTATTTCTGGTGAAGCTCGGGAAGGAGAGATGATGGCCGTTC 748
||||| | || ||||||||||||| |||||||| || ||||| ||||||||||| ||||
Sbjct 487 CTAAGATACTATTGAATGGTATTTCAGGTGAAGCCCGCGAAGGGGAGATGATGGCGGTTC 546
Query 749 TTGGAGCGAGCGGGTCAGGGAAATCAACCCTTATCGATGCATTAGCCAATCGGATTTCAA 808
||||||| || ||||| || |||||||| || ||||||||||||||||| ||||| |||
Sbjct 547 TTGGAGCAAGTGGGTCCGGTAAATCAACACTGATCGATGCATTAGCCAACCGGATCGCAA 606
Query 809 AAGAGAGCCTACGTGGTGAT--ATTACTTTAAACGGGGAAGTTCTTGAATCCAGCCTGCA 866
|||| ||||| | || ||| ||||| |||||||| |||||||||||||| ||| ||||
Sbjct 607 AAGATAGCCT-C-AGGGGATCCATTACCTTAAACGGAGAAGTTCTTGAATCAAGCATGCA 664
Query 867 TAAAGTCATATCGGCTTATGTGATGCAAGATGATCTTCTGTTCCCGATGCTCACCGTGGA 926
||||||||||||||||| ||||||||||| || ||||| ||||||||||| ||||||||
Sbjct 665 GAAAGTCATATCGGCTTACGTGATGCAAGACGACCTTCTCTTCCCGATGCTTACCGTGGA 724
Query 927 AGAAACTTTGATGTTTTCTGCTGAGTTCAGGCTTCCAAGCTCGCTTTCTAAGAAGAAAAA 986
|||||| | ||||| ||||| ||||||||||| || | || || || |||||||| ||
Sbjct 725 GGAAACTCTAATGTTCTCTGCAGAGTTCAGGCTCCCTCGTTCACTCTCCAAGAAGAAGAA 784
Query 987 GAAAGCACGGGTTCAAGCTCTGATTGATCAGCTCGGCCTGAGAAACGCAGCAAAAACCGT 1046
||||||| ||||||||||||||||||| || | ||||| || | ||| |||||||||||
Sbjct 785 GAAAGCAAGGGTTCAAGCTCTGATTGACCAATTAGGCCTAAGGAGCGCTGCAAAAACCGT 844
Query 1047 GATCGGTGATGAGGGGCACAGAGGTGTGTCTGGAGGAGAAAGGAGACGGGTGTCAATTGG 1106
||| |||||||| || |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 845 GATTGGTGATGAAGGCCACAGAGGAGTGTCTGGAGGAGAAAGGAGACGGGTATCAATTGG 904
Query 1107 AACCGATATAATCCATGATCCGATTATCCTCTTTCTTGATGAGCCAACCTCAGGTCTCGA 1166
|| ||| ||||||||||| || || ||||||||||| ||||||||||||||||| |||||
Sbjct 905 AAACGACATAATCCATGACCCAATCATCCTCTTTCTAGATGAGCCAACCTCAGGGCTCGA 964
Query 1167 CTCTACCAGTGCATACATGGTTGTCAAAGTGCTTCAGAGAATCGCACAAAGCGGCAGCAT 1226
|||||| || || ||||||||| ||||||| |||||||||||||||||||| ||||||||
Sbjct 965 CTCTACAAGCGCCTACATGGTTATCAAAGTCCTTCAGAGAATCGCACAAAGTGGCAGCAT 1024
Query 1227 AGTTATCATGTCCATCCATCAGCCGAGTTACAGAATCTTGGG-CTTACTCGATAAGTTAA 1285
|||||||||||| ||||||||||| |||||||||||| |||| ||| || ||| ||||||
Sbjct 1025 AGTTATCATGTCAATCCATCAGCCTAGTTACAGAATCATGGGTCTT-CTAGATCAGTTAA 1083
Query 1286 TCTTCCTATCTAGGGGAAACACCGTTTACAGCGGCTCCCCAACACATCTCCCTCGGTTCT 1345
||||||| |||| ||||||||| || ||||||||||| |||||||||||||||| |||||
Sbjct 1084 TCTTCCTTTCTAAGGGAAACACAGTCTACAGCGGCTCACCAACACATCTCCCTCAGTTCT 1143
Query 1346 TCTCGGAATTC-GGTCACCCAATTCCTGAAAACGAGAACAAGCCAGAGTTCGCACTCGAT 1404
|||| |||||| | |||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 1144 TCTCAGAATTCAAG-CACCCAATTCCTGAAAACGAGAACAAAACAGAGTTCGCTCTCGAT 1202
Query 1405 CTTATCCGTGAGCTAGAAGATTCTCCAGAAGGAACCAAAGCC-CTAGTCGAGTTCCACAA 1463
|| ||||| ||||| ||| ||||| ||||||||||| ||||| || ||||||||||||||
Sbjct 1203 CTCATCCGAGAGCTGGAATATTCTACAGAAGGAACC-AAGCCACTTGTCGAGTTCCACAA 1261
Query 1464 GCAATGGCGAGCAAAGCAAAC-CTCAAGC--CAG-AGCAG-AA---GA-AA-CACCAATG 1513
||||||||||||||||||| | | ||||| || | || || || || |||||| |
Sbjct 1262 GCAATGGCGAGCAAAGCAAGCAC-CAAGCTACAACAACAATAACAAGAGAAACACCAACG 1320
Query 1514 TATCT-CTC--AAAGATGCAATCAGCGCAAGTATCTCCAGAGGCAAACTTGTCTCCGGAG 1570
||||| ||| ||||| || || | ||| |||||||| ||||| ||||| ||||| ||||
Sbjct 1321 TATCTTCTCTCAAAGAAGCGATAACCGCGAGTATCTCAAGAGGGAAACTCGTCTCTGGAG 1380
Query 1571 CAAC-AA-A-C--CT-A--AGA--T--CATCAT--TTC-AAACCTTTGCAAACCCATTCT 1615
|||| || | | || | | | | || ||| ||| |||| || || || || ||||
Sbjct 1381 CAACGAACAACAACTCATCAAACCTAACACCATCATTCCAAACATTCGCCAATCCTTTCT 1440
Query 1616 GGACTGAAATGCTCGTGATTGGCAAACGAT-CTATACTAAACTCAAGAAGACAACCAGAG 1674
||| ||||||| | || || |||||||| | ||||| ||||||||||||||||||||||
Sbjct 1441 GGATTGAAATGATAGTAATAGGCAAACG-TGCTATATTAAACTCAAGAAGACAACCAGAA 1499
Query 1675 CTATTCGGAATGCGCCTCGGAGCTGTTCTAGTCACCGGAATCATCCTAGCCACAATATTC 1734
|| |||||||| | || |||||||| | |||||||||||||||||||| ||||| |||
Sbjct 1500 CTCCTCGGAATGAGACTAGGAGCTGTAATGGTCACCGGAATCATCCTAGCTACAATGTTC 1559
Query 1735 TGGAAACTAGACAATTCACCAAGAGGTAT-ACAAGAACGTTTAGGGTTCTTCGCATTCGC 1793
|| ||||||||||| |||| ||| | ||||||||||||||| ||||||||||||||
Sbjct 1560 ACTAACCTAGACAATTCCCCAAAAGG-AGCACAAGAACGTTTAGGATTCTTCGCATTCGC 1618
Query 1794 AATGTCCACAACATTCTACACCTGTGCAGAAGCAATACCAGTCTTTCTACAAGAACGCTA 1853
|||||| |||||||||||||| |||||||||||||| |||||||||||||||||||| ||
Sbjct 1619 AATGTCAACAACATTCTACACATGTGCAGAAGCAATCCCAGTCTTTCTACAAGAACGTTA 1678
Query 1854 CATATTCATGAGAGAAACAGCTTACAACGCTTACCGGCGATCATCATACGTCCTCGCTCA 1913
||||||||||||||||||||||||||||||||||||| |||| || ||||||||| ||||
Sbjct 1679 CATATTCATGAGAGAAACAGCTTACAACGCTTACCGGAGATCCTCCTACGTCCTCTCTCA 1738
Query 1914 CA-CAATAATCTCAATCCCTGCTCT-AATAATCTTATCCGCC-GCCTTCGCCGCCACAAC 1970
| | |||||||||||||| || || ||| || | ||||| || ||||||||||||||
Sbjct 1739 -ATCCATAATCTCAATCCCGGC-CTTAATCGTCCTCTCCGCAAGC-TTCGCCGCCACAAC 1795
Query 1971 ATTCTGGGCCGTAGGACTCGCCGGAGGCTCCGAA-GGCTTCCTCTTCTTCTTCTTCACAA 2029
|||||||||||| || |||| ||||||| || || || ||| ||||||||| ||||||||
Sbjct 1796 ATTCTGGGCCGTTGGTCTCGACGGAGGCGCC-AATGGTTTCTTCTTCTTCTACTTCACAA 1854
Query 2030 TCCTCA-CAGCGTTTTGGGCCGGAAGCTCCTTCGTGACATTCTTATCCGGCGT-AGT-CT 2086
|||| | | | |||||||| |||||||||||||| || ||| | |||||||| | | |
Sbjct 1855 TCCT-AGCCTCATTTTGGGCAGGAAGCTCCTTCGTAACGTTCCTCTCCGGCGTTA-TAC- 1911
Query 2087 CACACGTGATGATCGGATTCACGGTGGTTGTAGCAATCCTCGCATATTTCCTCCTCTTCT 2146
|| |||| ||| |||||||||| || || ||||| |||||||| || |||||||||||||
Sbjct 1912 CAAACGTAATGCTCGGATTCACAGTCGTAGTAGCGATCCTCGCTTACTTCCTCCTCTTCT 1971
Query 2147 CCGGATTCTTCATCTC-CAGAGATCGAATCCCAGTCTACTGGATCTGGTTCCATTACCTC 2205
|||||||||||||||| | |||||||||| || || |||||| |||||||||||||| ||
Sbjct 1972 CCGGATTCTTCATCTCTC-GAGATCGAATTCCTGTTTACTGGCTCTGGTTCCATTACATC 2030
Query 2206 TCCCTAGTGAAATACCCTTACGAAGGTGT-TCTACAGAACGAATT-CGAAGATCCGACGA 2263
||| | |||||||||||||||||||| || | | ||||||||||| | || |||||||||
Sbjct 2031 TCCTTGGTGAAATACCCTTACGAAGGAGTGT-TGCAGAACGAATTTCAAA-ATCCGACGA 2088
Query 2264 AATGCTTCATCC-GTGG-GATCCAAATGTTCGACAATTCGCCGCTGGGACAAGTT-CCGG 2320
||| ||| || | || | || | | ||||||||||||||| |||| | ||| |||
Sbjct 2089 GATGTTTCG-CCAGAGGAGTTC-AGTTATTCGACAATTCGCCGTTGGGGGA-GTTTCCGA 2145
Query 2321 CCGCCGTGAAAATCAGCCTCCTGAAGAGCATGAGCGGCGTTTTGGGGATC-AACGTGACG 2379
|| |||||| | | || ||||||| |||||||| || ||||||| | || ||||||
Sbjct 2146 ACGATGTGAAAGTGAATCTGTTGAAGAGTATGAGCGGTGTATTGGGGA-CGAATGTGACG 2204
Query 2380 GCGGAGACTTGCGTAACGACGGGAATCGACATTCTGAAGCAACAAGGAATCACTGAGATT 2439
||||||||||| || |||||||| || || ||| |||| || ||||| || || || |||
Sbjct 2205 GCGGAGACTTGTGTGACGACGGGGATTGATATTTTGAAACAGCAAGGGATTACGGATATT 2264
Query 2440 AGCAAATGGAATTGCTTGTGGATCACTGTAGCTTGGGGATTCTTCTTTAGGGTTCTCTTC 2499
|| ||||||||||| |||||||| ||||| |||||||| || |||||||||||| | ||
Sbjct 2265 AGTAAATGGAATTGTTTGTGGATTACTGTTGCTTGGGGTTTTTTCTTTAGGGTTTTGTTT 2324
Query 2500 TACTTCACACTCTTGATCGGAAGCAAGAACAA 2531
|| ||||| |||||||| || |||||||||||
Sbjct 2325 TATTTCACTCTCTTGATTGGTAGCAAGAACAA 2356
> AT2G37362.1 | Symbols: | Potential natural antisense gene, locus
overlaps with AT2G37360 | chr2:15673687-15675978 FORWARD
LENGTH=2292
Length=2292
Score = 1650 bits (893), Expect = 0.0
Identities = 1566/1883 (83%), Gaps = 78/1883 (4%)
Strand=Plus/Minus
Query 571 TCTTCTTCTCCGTTTGTTCTTTCCTTCAAAGACTTGACTTATAGTGTGAAGATCCAGAAG 630
|||||||| |||||||||||||| |||| |||||||| || || |||||||||||||||
Sbjct 1863 TCTTCTTCCCCGTTTGTTCTTTCATTCACTGACTTGACCTACAGCGTGAAGATCCAGAAG 1804
Query 631 AAGTTTAAGCCCTTCCCCTGTTGCGGTGATTCGCCTTTTAATG-GT-ATGGAGATGAATA 688
|||||||| ||| || | || ||| || | | |||| | | | | |||| |
Sbjct 1803 AAGTTTAATCCCCTCGCTTGCTGC--AGA-AGGTCAGGAAATGATTCCTCG-G-TGAACA 1749
Query 689 CTAAGGTGCTGCTGAATGGTATTTCTGGTGAAGCTCGGGAAGGAGAGATGATGGCCGTTC 748
||||| | || ||||||||||||| |||||||| || ||||| ||||||||||| ||||
Sbjct 1748 CTAAGATACTATTGAATGGTATTTCAGGTGAAGCCCGCGAAGGGGAGATGATGGCGGTTC 1689
Query 749 TTGGAGCGAGCGGGTCAGGGAAATCAACCCTTATCGATGCATTAGCCAATCGGATTTCAA 808
||||||| || ||||| || |||||||| || ||||||||||||||||| ||||| |||
Sbjct 1688 TTGGAGCAAGTGGGTCCGGTAAATCAACACTGATCGATGCATTAGCCAACCGGATCGCAA 1629
Query 809 AAGAGAGCCTACGTGGTGAT--ATTACTTTAAACGGGGAAGTTCTTGAATCCAGCCTGCA 866
|||| ||||| | || ||| ||||| |||||||| |||||||||||||| ||| ||||
Sbjct 1628 AAGATAGCCT-C-AGGGGATCCATTACCTTAAACGGAGAAGTTCTTGAATCAAGCATGCA 1571
Query 867 TAAAGTCATATCGGCTTATGTGATGCAAGATGATCTTCTGTTCCCGATGCTCACCGTGGA 926
||||||||||||||||| ||||||||||| || ||||| ||||||||||| ||||||||
Sbjct 1570 GAAAGTCATATCGGCTTACGTGATGCAAGACGACCTTCTCTTCCCGATGCTTACCGTGGA 1511
Query 927 AGAAACTTTGATGTTTTCTGCTGAGTTCAGGCTTCCAAGCTCGCTTTCTAAGAAGAAAAA 986
|||||| | ||||| ||||| ||||||||||| || | || || || |||||||| ||
Sbjct 1510 GGAAACTCTAATGTTCTCTGCAGAGTTCAGGCTCCCTCGTTCACTCTCCAAGAAGAAGAA 1451
Query 987 GAAAGCACGGGTTCAAGCTCTGATTGATCAGCTCGGCCTGAGAAACGCAGCAAAAACCGT 1046
||||||| ||||||||||||||||||| || | ||||| || | ||| |||||||||||
Sbjct 1450 GAAAGCAAGGGTTCAAGCTCTGATTGACCAATTAGGCCTAAGGAGCGCTGCAAAAACCGT 1391
Query 1047 GATCGGTGATGAGGGGCACAGAGGTGTGTCTGGAGGAGAAAGGAGACGGGTGTCAATTGG 1106
||| |||||||| || |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 1390 GATTGGTGATGAAGGCCACAGAGGAGTGTCTGGAGGAGAAAGGAGACGGGTATCAATTGG 1331
Query 1107 AACCGATATAATCCATGATCCGATTATCCTCTTTCTTGATGAGCCAACCTCAGGTCTCGA 1166
|| ||| ||||||||||| || || ||||||||||| ||||||||||||||||| |||||
Sbjct 1330 AAACGACATAATCCATGACCCAATCATCCTCTTTCTAGATGAGCCAACCTCAGGGCTCGA 1271
Query 1167 CTCTACCAGTGCATACATGGTTGTCAAAGTGCTTCAGAGAATCGCACAAAGCGGCAGCAT 1226
|||||| || || ||||||||| ||||||| |||||||||||||||||||| ||||||||
Sbjct 1270 CTCTACAAGCGCCTACATGGTTATCAAAGTCCTTCAGAGAATCGCACAAAGTGGCAGCAT 1211
Query 1227 AGTTATCATGTCCATCCATCAGCCGAGTTACAGAATCTTGGG-CTTACTCGATAAGTTAA 1285
|||||||||||| ||||||||||| |||||||||||| |||| ||| || ||| ||||||
Sbjct 1210 AGTTATCATGTCAATCCATCAGCCTAGTTACAGAATCATGGGTCTT-CTAGATCAGTTAA 1152
Query 1286 TCTTCCTATCTAGGGGAAACACCGTTTACAGCGGCTCCCCAACACATCTCCCTCGGTTCT 1345
||||||| |||| ||||||||| || ||||||||||| |||||||||||||||| |||||
Sbjct 1151 TCTTCCTTTCTAAGGGAAACACAGTCTACAGCGGCTCACCAACACATCTCCCTCAGTTCT 1092
Query 1346 TCTCGGAATTC-GGTCACCCAATTCCTGAAAACGAGAACAAGCCAGAGTTCGCACTCGAT 1404
|||| |||||| | |||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 1091 TCTCAGAATTCAAG-CACCCAATTCCTGAAAACGAGAACAAAACAGAGTTCGCTCTCGAT 1033
Query 1405 CTTATCCGTGAGCTAGAAGATTCTCCAGAAGGAACCAAAGCC-CTAGTCGAGTTCCACAA 1463
|| ||||| ||||| ||| ||||| ||||||||||| ||||| || ||||||||||||||
Sbjct 1032 CTCATCCGAGAGCTGGAATATTCTACAGAAGGAACC-AAGCCACTTGTCGAGTTCCACAA 974
Query 1464 GCAATGGCGAGCAAAGCAAAC-CTCAAGC--CAG-AGCAG-AA---GA-AA-CACCAATG 1513
||||||||||||||||||| | | ||||| || | || || || || |||||| |
Sbjct 973 GCAATGGCGAGCAAAGCAAGCAC-CAAGCTACAACAACAATAACAAGAGAAACACCAACG 915
Query 1514 TATCT-CTC--AAAGATGCAATCAGCGCAAGTATCTCCAGAGGCAAACTTGTCTCCGGAG 1570
||||| ||| ||||| || || | ||| |||||||| ||||| ||||| ||||| ||||
Sbjct 914 TATCTTCTCTCAAAGAAGCGATAACCGCGAGTATCTCAAGAGGGAAACTCGTCTCTGGAG 855
Query 1571 CAAC-AA-A-C--CT-A--AGA--T--CATCAT--TTC-AAACCTTTGCAAACCCATTCT 1615
|||| || | | || | | | | || ||| ||| |||| || || || || ||||
Sbjct 854 CAACGAACAACAACTCATCAAACCTAACACCATCATTCCAAACATTCGCCAATCCTTTCT 795
Query 1616 GGACTGAAATGCTCGTGATTGGCAAACGAT-CTATACTAAACTCAAGAAGACAACCAGAG 1674
||| ||||||| | || || |||||||| | ||||| ||||||||||||||||||||||
Sbjct 794 GGATTGAAATGATAGTAATAGGCAAACG-TGCTATATTAAACTCAAGAAGACAACCAGAA 736
Query 1675 CTATTCGGAATGCGCCTCGGAGCTGTTCTAGTCACCGGAATCATCCTAGCCACAATATTC 1734
|| |||||||| | || |||||||| | |||||||||||||||||||| ||||| |||
Sbjct 735 CTCCTCGGAATGAGACTAGGAGCTGTAATGGTCACCGGAATCATCCTAGCTACAATGTTC 676
Query 1735 TGGAAACTAGACAATTCACCAAGAGGTAT-ACAAGAACGTTTAGGGTTCTTCGCATTCGC 1793
|| ||||||||||| |||| ||| | ||||||||||||||| ||||||||||||||
Sbjct 675 ACTAACCTAGACAATTCCCCAAAAGG-AGCACAAGAACGTTTAGGATTCTTCGCATTCGC 617
Query 1794 AATGTCCACAACATTCTACACCTGTGCAGAAGCAATACCAGTCTTTCTACAAGAACGCTA 1853
|||||| |||||||||||||| |||||||||||||| |||||||||||||||||||| ||
Sbjct 616 AATGTCAACAACATTCTACACATGTGCAGAAGCAATCCCAGTCTTTCTACAAGAACGTTA 557
Query 1854 CATATTCATGAGAGAAACAGCTTACAACGCTTACCGGCGATCATCATACGTCCTCGCTCA 1913
||||||||||||||||||||||||||||||||||||| |||| || ||||||||| ||||
Sbjct 556 CATATTCATGAGAGAAACAGCTTACAACGCTTACCGGAGATCCTCCTACGTCCTCTCTCA 497
Query 1914 CA-CAATAATCTCAATCCCTGCTCT-AATAATCTTATCCGCC-GCCTTCGCCGCCACAAC 1970
| | |||||||||||||| || || ||| || | ||||| || ||||||||||||||
Sbjct 496 -ATCCATAATCTCAATCCCGGC-CTTAATCGTCCTCTCCGCAAGC-TTCGCCGCCACAAC 440
Query 1971 ATTCTGGGCCGTAGGACTCGCCGGAGGCTCCGAA-GGCTTCCTCTTCTTCTTCTTCACAA 2029
|||||||||||| || |||| ||||||| || || || ||| ||||||||| ||||||||
Sbjct 439 ATTCTGGGCCGTTGGTCTCGACGGAGGCGCC-AATGGTTTCTTCTTCTTCTACTTCACAA 381
Query 2030 TCCTCA-CAGCGTTTTGGGCCGGAAGCTCCTTCGTGACATTCTTATCCGGCGT-AGT-CT 2086
|||| | | | |||||||| |||||||||||||| || ||| | |||||||| | | |
Sbjct 380 TCCT-AGCCTCATTTTGGGCAGGAAGCTCCTTCGTAACGTTCCTCTCCGGCGTTA-TAC- 324
Query 2087 CACACGTGATGATCGGATTCACGGTGGTTGTAGCAATCCTCGCATATTTCCTCCTCTTCT 2146
|| |||| ||| |||||||||| || || ||||| |||||||| || |||||||||||||
Sbjct 323 CAAACGTAATGCTCGGATTCACAGTCGTAGTAGCGATCCTCGCTTACTTCCTCCTCTTCT 264
Query 2147 CCGGATTCTTCATCTC-CAGAGATCGAATCCCAGTCTACTGGATCTGGTTCCATTACCTC 2205
|||||||||||||||| | |||||||||| || || |||||| |||||||||||||| ||
Sbjct 263 CCGGATTCTTCATCTCTC-GAGATCGAATTCCTGTTTACTGGCTCTGGTTCCATTACATC 205
Query 2206 TCCCTAGTGAAATACCCTTACGAAGGTGT-TCTACAGAACGAATT-CGAAGATCCGACGA 2263
||| | |||||||||||||||||||| || | | ||||||||||| | || |||||||||
Sbjct 204 TCCTTGGTGAAATACCCTTACGAAGGAGTGT-TGCAGAACGAATTTCAAA-ATCCGACGA 147
Query 2264 AATGCTTCATCC-GTGG-GATCCAAATGTTCGACAATTCGCCGCTGGGACAAGTT-CCGG 2320
||| ||| || | || | || | | ||||||||||||||| |||| | ||| |||
Sbjct 146 GATGTTTCG-CCAGAGGAGTTC-AGTTATTCGACAATTCGCCGTTGGGGGA-GTTTCCGA 90
Query 2321 CCGCCGTGAAAATCAGCCTCCTGAAGAGCATGAGCGGCGTTTTGGGGATC-AACGTGACG 2379
|| |||||| | | || ||||||| |||||||| || ||||||| | || ||||||
Sbjct 89 ACGATGTGAAAGTGAATCTGTTGAAGAGTATGAGCGGTGTATTGGGGA-CGAATGTGACG 31
Query 2380 GCGGAGACTTGCGTAACGACGGG 2402
||||||||||| || ||||||||
Sbjct 30 GCGGAGACTTGTGTGACGACGGG 8
> AT3G55090.1 | Symbols: | ABC-2 type transporter family protein
| chr3:20416342-20418552 REVERSE LENGTH=2211
Length=2211
Score = 263 bits (142), Expect = 7e-69
Identities = 466/622 (75%), Gaps = 24/622 (4%)
Strand=Plus/Plus
Query 1641 ACGATCTATACTAAACTCAAGAAGACAACCAGAGCTATTCGGAATGCGCCTCG-GAGCTG 1699
||| || || || ||||| || ||||||| |||||| |||||||||| | | | | |
Sbjct 1311 ACGCTCAATCCTCAACTCCCGACGACAACCGGAGCTACTCGGAATGCGATTAGCCA-CCG 1369
Query 1700 TTCTAGTCACCGGAATCATCCTAGCCACAATATTCTGGAAACTAGACAATTCACCAAGAG 1759
| | ||||||||| ||||| ||||||| |||||||| | | || |||||||||| ||
Sbjct 1370 TAATCGTCACCGGATTCATCTTAGCCACCGTATTCTGGCGATTGGATAATTCACCAAAAG 1429
Query 1760 GTA-TACAAGAACGTTTAGGGTTCTTCGCATTCGCAATGTCCACAACATTCTACACCTGT 1818
| | | ||||| || |||||||||||||||||||||||||| |||| |||||||| ||
Sbjct 1430 G-AGTTCAAGAGCGGTTAGGGTTCTTCGCATTCGCAATGTCAACAATGTTCTACACTTGC 1488
Query 1819 GCAGAAGCAATACCAGTCTTTCTACAAGAACGCTACATATTCATGAGAGAAACAGCTTAC 1878
|| || || | || || || || || ||||| ||||| |||||||||||||||||||||
Sbjct 1489 GCCGATGCTCTTCCCGTGTTCCTCCAGGAACGTTACATCTTCATGAGAGAAACAGCTTAC 1548
Query 1879 AACGCTTACCGGCGATCATCATACGTCCTCGCTCACACAATAATCT-CAATCCCTGCTCT 1937
|||||||||||| |||| || ||||| ||| ||||| | || | | | ||||| | ||
Sbjct 1549 AACGCTTACCGGAGATCCTCCTACGTTCTCTCTCACGCCATTGT-TACCTTCCCTTCGCT 1607
Query 1938 AATAATCTTATCCGCCGCCTTCGCCGCCACAACATTCTGGGCCGTAGGACTCGCCGGAGG 1997
|| || | || || ||||| | || || || ||||| || || || | |||||
Sbjct 1608 CATCTTCCTCTCTTTAGCTTTCGCAGTGACGACGTTTTGGGCTGTTGGGCTTGAAGGAGG 1667
Query 1998 CTCCGAA-GG-CTTCCTCTTCTTCTTCTTCACAATCCTCACAGCGT-TTTG-GG-CCGGA 2052
| | || || ||| | |||| || ||| | | || || ||| | ||| || |||||
Sbjct 1668 C-CT-AATGGGCTTTTTATTCTACTGCTT-A-A-TCATCTTAGCCTCTTTCTGGTCCGGA 1722
Query 2053 AGCTCCTTCGTGACATTCTTATCCGGCGTAGTCTC-ACACGTGATGATCGGATTCACGGT 2111
|||||||||||||| |||||||||||||| || || ||| |||||| | || | |||| |
Sbjct 1723 AGCTCCTTCGTGACTTTCTTATCCGGCGTCGT-TCCACATGTGATGTTAGGCTACACGAT 1781
Query 2112 GGTTGTAGCAATCCTCGCATATTTCCTCCTCTTCTCCGGATTCTTCATCTCCAGAGATCG 2171
||||| || || | || || ||| | || ||| || ||||||||| |||||||||
Sbjct 1782 CGTTGTTGCTATTTTAGCTTACTTCTTGCTTTTCAGTGGCTTCTTCATCAACAGAGATCG 1841
Query 2172 AATCCC--AGTCTACTGGATCTGGTTCCATTACCTCTCCCTAGTGAAATACCCTTACGAA 2229
|||||| ||| | ||||| ||||| ||||| || || || || || || || |||||
Sbjct 1842 AATCCCTCAGTAT--TGGATTTGGTTTCATTATCTTTCTCTGGTTAAGTATCCATACGA- 1898
Query 2230 GGTG-TTCTACAGAACGAATTC 2250
|| | |||| |||||||| |||
Sbjct 1899 GGCGGTTCTTCAGAACGAGTTC 1920
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 129581213769
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5