BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg485754
Length=1917
Score E
Sequences producing significant alignments: (Bits) Value
AT3G53640.1 | Symbols: | Protein kinase superfamily protein | ... 2488 0.0
AT1G13350.2 | Symbols: | Protein kinase superfamily protein | ... 1677 0.0
AT3G25840.1 | Symbols: | Protein kinase superfamily protein | ... 935 0.0
> AT3G53640.1 | Symbols: | Protein kinase superfamily protein
| chr3:19887007-19888935 REVERSE LENGTH=1929
Length=1929
Score = 2488 bits (1347), Expect = 0.0
Identities = 1778/1970 (90%), Gaps = 94/1970 (5%)
Strand=Plus/Plus
Query 1 ATGGTGAGAGATAAGATGGTAGAATCAAACCACCGCAAACACCGCCGGTCGTATTCGCCG 60
|||||||| |||||||| |||||||||| ||||||||||||||| |||||||||| ||
Sbjct 1 ATGGTGAGCGATAAGATAGTAGAATCAAGCCACCGCAAACACCGTAGGTCGTATTCTCCT 60
Query 61 TCCGAAGAAGTCGTTAAATCTTCGAAGCGGCAAAAACACCATCATCACAAGCACCATCAT 120
||||| ||||||||||||||||| |||||||| || ||||||||||||||| ||||
Sbjct 61 TCCGACGAAGTCGTTAAATCTTCCAAGCGGCACAAGCACCATCATCACAAG---CATC-- 115
Query 121 GATCACAAG-CATCGACACAGTCATCA--TCTTG--ATGAAGAGAATG-TT-TCTATGTC 173
|| ||| || |||| | | | || | | | ||||| |||||| || || || |
Sbjct 116 GA-CAC-AGTCATC-A-TC-TTGATGAGGAC-GGCAATGAAAAGAATGTTTATCCAT-T- 167
Query 174 TTTAGGGG-A--C--G----G-TGGTGAACTTGAGATGGAGGAAGGGGAG-ATTTCGAAG 222
||| |||| | | | | |||||||||||| |||||||||||||| |||| ||||
Sbjct 168 TTT-GGGGAATCCTGGTAACGATGGTGAACTTGATTTGGAGGAAGGGGAGAATTT-GAAG 225
Query 223 -AG--GGGAAGCATTGATAGAGATAGCAATAGAGACCACTAC--A-G-A--AGTAGTAG- 272
|| |||||||||||||||||| |||||||||||| ||||| | | | ||||||||
Sbjct 226 AAGAAGGGAAGCATTGATAGAGAAAGCAATAGAGACAACTACAGAGGTAGGAGTAGTAGA 285
Query 273 GA-GGAG-TA-G---AG-A-TA-A-AG-CT---AGGGAGAATGAAAGAGAGAGAAGTAAA 318
|| || || | || | || | || || ||||||||||||||||||||| ||||
Sbjct 286 GATAAAGCTAGGTCTAGTAGTAGAGAGACTGGGAGGGAGAATGAAAGAGAGAGACGTAAG 345
Query 319 GATCAAGATAGGGATAGAGGAACAAGAGAACTTCAGAGTGATCAGGAGAAGTATAAAAGT 378
|||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||
Sbjct 346 GATCAAGATAGGGATAGAGGAAGAAGAGAAGACCAGAGTGATCAGGAGATCTATAAAAGT 405
Query 379 GGTGGTGATGGATATGGGGAAGTGAGGC---AT---GAAGATGACTTAGATTCTGTAAAA 432
||||||||||||||||||||||| |||| || |||||||||||||||||| |||||
Sbjct 406 GGTGGTGATGGATATGGGGAAGTTAGGCATGATGCAGAAGATGACTTAGATTCTTTAAAA 465
Query 433 GGCCATAAACCTAACGGTTGCAGTTTCCAAGAAACTCAAGGCAACGTTGAAAAGTCAGAA 492
|||||||||||||| | | | |||||||| ||||||||||||| ||| |||
Sbjct 466 AGCCATAAACCTAAC----G--G--T----GAAACTCAGGGCAACGTTGAAAGGTCTGAA 513
Query 493 ACTGATAATGATGATGAAGGTGATGATGTTGTTTGGGAAGTTGAAGAACAAGAAGCTTTA 552
||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||| |
Sbjct 514 GTTGATAATGATGATGACGGTGAAGATGTTGTTTGGGGAGTTGAAGAACAAGAAGCTGCA 573
Query 553 GACCTGAATAGAATCGAGGAAAGCAGGAGGATTACGCAAGCCATATTGGAGAAATATAAG 612
|| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 574 GAGATGAAAAGAATCGAGGAAAGCAAGAGGATTACGCAAGCCATATTGGAGAAATATAAG 633
Query 613 AAAAAGTTGGAGCAGTCCTCTACTGTGGCAGATGTTCAAGCTAAAGTTGGGTTGGATACT 672
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 634 AAAAAGTTGGAGCAGTCCTCTACTGTGGCAGATGTTCAAGCTAAAGCTGGGTTGGATACT 693
Query 673 GAGGCGGTAGACGGTGAAGTCGCCAAGCTATCTTCGA-CAGTTGGGGAATCACCTGCACG 731
||||| ||||| ||||||||||||||||||||||| | ||||||||||| ||||||||||
Sbjct 694 GAGGCCGTAGATGGTGAAGTCGCCAAGCTATCTTC-AGCAGTTGGGGAAACACCTGCACG 752
Query 732 GCTTGTGATTTCAGACTTACATAGGACACTAGCTTCCGCAGGGGTTGAGGAAGGCAGCCC 791
||||||||| ||||||| | ||| ||||||||||||||| |||||||||
Sbjct 753 GCTTGTGATATCAGACTCAGATATGACACTAGCTTCCGC------------AGGCAGCCC 800
Query 792 AAAGAATGACATGTTCAGTGATGATATCTTTGGGGAGTCT-C-C-AGCTGCTGGTACTCG 848
||||| |||||||||||||||||||||||||||||||||| | | ||||| |||||||||
Sbjct 801 AAAGAGTGACATGTTCAGTGATGATATCTTTGGGGAGTCTCCTCTAGCTGATGGTACTCG 860
Query 849 GAAAGGAAATGGC-CTTGTTCCTTTTGTAAGGAGTGGACTCCATGATAATTGGGATGATG 907
|||||| ||| || ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 861 GAAAGGGAAT-GCACTTGTTCCTTTTGTAAGGAGTGGACTCAATGATAATTGGGATGATG 919
Query 908 CAGAAGGATACTACAGTTATCAGTTTGGTGAACTACTTGATGATAGGTATGAAATCATGG 967
||||||| || |||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct 920 CAGAAGGTTATTACAGTTATCAGCTTGGTGAACTACTTGATGATAGATATGAAATCATGG 979
Query 968 CTACTCATGGAAAAGGTGTCTTCTCTACCGTGGTGCGGGCAAAAGACACAAAACCTGAAC 1027
|||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||| |
Sbjct 980 CTACTCATGGGAAAGGTGTATTCTCTACCGTGGTGCGTGCAAAAGACACAAAACCTGAGC 1039
Query 1028 TAGCTGAACCTGAGGAAGTGGCTATAAAATTTATTCGGAACAATGAGACAATGCATAAGG 1087
||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct 1040 TAGGTGAACCTGAGGAAGTGGCTATAAAAATTATTCGGAAAAATGAGACAATGCATAAGG 1099
Query 1088 CTGGCCAGGCTGAGATTCGGATATTGAAGAAGCTAGCTGGCTCTGACCCAGAGAATAAGC 1147
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 1100 CTGGCCAGGCTGAGATTCGGATATTGAAGAAGCTAGTTTGCTCTGACCCAGAGAATAAGC 1159
Query 1148 GCCACTGCGTCCGTCTTCTTTCAACTTTTAAATATAGGAACCACCTTTGCTTGGTGTTTG 1207
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1160 ACCACTGCGTCCGTCTTCTTTCAACTTTTGAATATAGGAACCACCTTTGCTTGGTGTTTG 1219
Query 1208 AGTCTCTTCATCTGAATCTCCGTGAAGTTGTGAAGAAGATTGGTGTCAACATTGGTCTAA 1267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1220 AGTCTCTTCATCTGAATCTCCGTGAAGTTGTGAAGAAGATTGGTGTCAACATTGGTCTAA 1279
Query 1268 AACTATCTGATGTTAGAGTGTATGCTGAGCAGTTATTCATATCCCTTAAACATCTCAAGA 1327
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1280 AACTATATGATGTTAGAGTGTATGCTGAGCAGTTATTCATATCCCTTAAACATCTCAAGA 1339
Query 1328 ATTGTGGGGTTCTTCACTGCGATATAAAGCCTGACAACATACTAGTGAATGAGGGGAGAA 1387
| |||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||
Sbjct 1340 ACTGTGGGGTTCTTCACTGCGATATAAAGCCTGATAACATACTAATGAATGAGGGAAGAA 1399
Query 1388 ACATGTTAAAGCTTTGTGACTTTGGTAGTGCAATGTTTGCTGGTGAAAACCAAGTTACAC 1447
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1400 ACATGTTAAAGCTTTGTGATTTTGGTAGTGCAATGTTTGCTGGTGAAAACCAAGTTACAC 1459
Query 1448 CATATCTTGTTAGTCGCTTCTACAGAGCTCCAGAAATCATTCTTGGACTATCCTACGACC 1507
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1460 CATATCTTGTTAGTCGTTTCTACAGAGCTCCAGAAATCATTCTTGGACTACCCTACGACC 1519
Query 1508 ATCCGTTAGATATCTGGTCTGTGGGTTGTTGCCTGTATGAGCTTTATAGCGGGAAAATTA 1567
||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||||
Sbjct 1520 ATCCGTTAGATATTTGGTCAGTTGGTTGTTGTCTGTATGAGCTTTATAGCGGGAAAATTA 1579
Query 1568 TGTTCCCTGGCTCCACAAACAATGATATGTTACGCCTTCATATGGAACTGAAAGGTCCCT 1627
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1580 TGTTCCCTGGCTCCACAAACAATGATATGTTACGCCTGCATATGGAACTGAAAGGTCCCT 1639
Query 1628 TCCCTAAAAAGATGCTTCGCAAAGGAGCATTTATCGATCAGCACTTCGATAAGGACTTAT 1687
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 1640 TCCCTAAAAAGATGCTTCGCAAAGGAGCATTTATCGATCAACACTTTGATAAGGACTTAT 1699
Query 1688 GCTTCTATGCTACAGAGGAGGATAGTGTTACTGGAAAGACCATAAGGAGAATAATGGTAA 1747
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 1700 GCTTCTATGCTACAGAGGAGGATAGTGTTACTGGAAAGACAATAAGGAGAATAATGGTCA 1759
Query 1748 ACATAAAGCCAAAAGATTTAGGTTCAGTAATTAGACGACGTTATGAGGATGAAGATCCCA 1807
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1760 ACGTAAAGCCAAAAGATTTAGGTTCAGTAATTAGACGACGTTATGAGGATGAAGATCCCA 1819
Query 1808 AAGTGTTGGTTCATTTCAGGAATCTTCTGGACAAAATTTTCACACTTGATCCTCAAAAGA 1867
| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1820 AGGTGTTGGTTCATTTCAGGAATCTTTTGGACAAAATTTTCACACTTGATCCTCAAAAGA 1879
Query 1868 GACTTACAGTGTCACAGGCATTAGCTCACCCATTCATCACGGGCAAATGA 1917
|||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1880 GACTTACAGTGTCACAGGCATTAGCTCACCCATTCATCACGGGCAAGTGA 1929
> AT1G13350.2 | Symbols: | Protein kinase superfamily protein
| chr1:4572419-4576632 REVERSE LENGTH=2535
Length=2535
Score = 1677 bits (908), Expect = 0.0
Identities = 1183/1308 (90%), Gaps = 49/1308 (4%)
Strand=Plus/Plus
Query 648 TCAAGCTAAAGTTGGGTTGGATACTGAGGCGGTAGACGGTGAAGTCGCCAAGCTATCTTC 707
||||||||||| ||||||||||| ||| || ||||| ||||||||||||||||| || ||
Sbjct 1156 TCAAGCTAAAGCTGGGTTGGATATTGATGCCGTAGATGGTGAAGTCGCCAAGCTTTCATC 1215
Query 708 GACAGTTGGGGAATCACCTGCACGGCTTGTGATTTCAGACTTACATAGGACACTAGCTTC 767
| ||||||||||||||||||||| |||||| |||||||||| | ||||||||||||||||
Sbjct 1216 GGCAGTTGGGGAATCACCTGCACAGCTTGTAATTTCAGACTCAGATAGGACACTAGCTTC 1275
Query 768 CGCAGGGGTTGAGGAAGGCAGCCCAAA-G----------A-ATGACATGTTCAGTGATGA 815
| ||||| ||| ||||||||||||||| | | |||||||||||| ||||||
Sbjct 1276 CACAGGGCTTGGGGAAGGCAGCCCAAAGGATAAAATATCAGATGACATGTTCACTGATGA 1335
Query 816 TATCTTTGGGGAGTCTCCAGC---T-G-C------T-GG-TA-CT-C---GGAAAGGAAA 857
||||||||||||||||||||| | | | | || || || | ||||||| ||
Sbjct 1336 TATCTTTGGGGAGTCTCCAGCTGATAGTCAGAAAATGGGCTATCTGCGAGGGAAAGGGAA 1395
Query 858 TGGCCTTGTTCCTTTTGTAAGGAGTGGACTCCATGATAATTGGGATGATGCAGAAGGATA 917
||| | ||||| ||||||||||||||||| | ||||||||||||||||||||||| ||
Sbjct 1396 TGG-C--ATTCCTATTGTAAGGAGTGGACTCGACGATAATTGGGATGATGCAGAAGGTTA 1452
Query 918 CTACAGTTATCAGTTTGGTGAACTACTTGATGATAGGTATGAAATCATGGCTACTCATGG 977
||||||||||| || || ||||||||||||||||| |||||||||||||||||||||||
Sbjct 1453 TTACAGTTATCAATTAGGGGAACTACTTGATGATAGATATGAAATCATGGCTACTCATGG 1512
Query 978 AAAAGGTGTCTTCTCTACCGTGGTGCGGGCAAAAGACACAAAACCTGAACTAGCTGAACC 1037
||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct 1513 AAAAGGTGTCTTCTCTACCGTGGTGCGGGCAAAAGACACAAAAGCTGAACTAGGTGAACC 1572
Query 1038 TGAGGAAGTGGCTATAAAATTTATTCGGAACAATGAGACAATGCATAAGGCTGGCCAGGC 1097
||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |
Sbjct 1573 TGAGGAAGTGGCTATAAAAATTATTCGGAACAATGAGACAATGCATAAGGCCGGCCAGAC 1632
Query 1098 TGAGATTCGGATATTGAAGAAGCTAGCTGGCTCTGACCCAGAGAATAAGCGCCACTGCGT 1157
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1633 TGAGATTCAGATATTGAAGAAGCTAGCTGGCTCTGACCCAGAGAATAAGCGCCACTGCGT 1692
Query 1158 CCGTCTTCTTTCAACTTTTAAATATAGGAACCACCTTTGCTTGGTGTTTGAGTCTCTTCA 1217
||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1693 TCGTTTTCTTTCAACTTTTAAGTATAGGAACCACCTTTGCTTGGTGTTTGAGTCTCTTCA 1752
Query 1218 TCTGAATCTCCGTGA-AGTTGTGAAGAAG-ATTGGT-GTCAACATTGGTCTAAAACTATC 1274
||||||||||||||| | ||||||||||| || ||| | |||||||||| | |||||||
Sbjct 1753 TCTGAATCTCCGTGAGA-TTGTGAAGAAGTAT-GGTCG-CAACATTGGTATTCAACTATC 1809
Query 1275 TGATGTTAGAGTGTATGCTGA-GCAGTTATTCATATCCCTTAAACATCTCAAGAATTGTG 1333
|| ||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||
Sbjct 1810 TGGTGTTAGAGTGTATGCA-ACGCAGTTATTCATATCCCTTAAACATCTCAAGAACTGTG 1868
Query 1334 GGGTTCTTCACTGCGATATAAAGCCTGACAACATACTAGTGAATGAGGGGAGAAACATGT 1393
|||||||||||||||||||||||||||||||||| || ||||||||||| ||||||| ||
Sbjct 1869 GGGTTCTTCACTGCGATATAAAGCCTGACAACATGCTGGTGAATGAGGGAAGAAACACGT 1928
Query 1394 TAAAGCTTTGTGACTTTGGTAGTGCAATGTTTGCTGGTGA-AAACCAAGTTACACCATAT 1452
|||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||
Sbjct 1929 TAAAGCTTTGTGACTTTGGTAGTGCAATGTTTGCTGGT-ACAAACGAAGTTACACCATAT 1987
Query 1453 CTTGTTAGTCGCTTCTACAGAGCTCCAGAAATCATTCTTGGACTATCC-TACGACCATCC 1511
|||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||
Sbjct 1988 CTTGTTAGTCGCTTCTACAGAGCTCCAGAAATAATTCTTGGACT-TCCCTACGACCATCC 2046
Query 1512 GTTAGATATCTGGTCTGTGGGTTGTTGCCTGTATGAGCTTTATAGCGGGAAAATTATGTT 1571
||||||||| ||||| || ||||| || ||||||||||||| ||||||||||||||||||
Sbjct 2047 GTTAGATATATGGTCAGTTGGTTGCTGTCTGTATGAGCTTTTTAGCGGGAAAATTATGTT 2106
Query 1572 CCCTGGCTCCACAAACAATGATATGTTACGCCTTCATATGGAACTGAAAGGTCCCTTCCC 1631
||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||
Sbjct 2107 CCCTGGCTCCACAAACAATGAAATGTTACGCCTGCATATGGAACTGAAAGGTGCCTTCCC 2166
Query 1632 TAAAAAGATGCTTCGCAAAGGAGCATTTATCGATCAGCACTTCGATAAGGACTTATGCTT 1691
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 2167 TAAAAAGATGCTTCGCAAGGGAGCATTTATCGATCAGCACTTTGATAAGGACTTATGCTT 2226
Query 1692 CTATGCTACAGAGGAGGATAGTGTTACTGGAAAGACCATAAGGAGAATAATGGTAAACAT 1751
|||||||||||||||||||||||||||| ||||||| | || |||||| |||||||||||
Sbjct 2227 CTATGCTACAGAGGAGGATAGTGTTACTAGAAAGACAACAAAGAGAATGATGGTAAACAT 2286
Query 1752 AAAGCCAAAAGA-TTTAGGTTCAGTAATTAGACGACGTTATGAGGATGAAGATCCCAAAG 1810
|||||||||||| ||| ||||||||||||| || ||||||| ||||||||||| ||| |
Sbjct 2287 AAAGCCAAAAGAATTT-GGTTCAGTAATTAAACAACGTTATAAGGATGAAGATAGCAA-G 2344
Query 1811 T-GTTGGTTCATTTCAGGAATCTTCTGGACAAAATTTTCACACTTGATCCTCAAAAGAGA 1869
| |||||||||||||||| ||||||| |||| |||||||| |||||||||||| ||||||
Sbjct 2345 TTGTTGGTTCATTTCAGGGATCTTCTAGACAGAATTTTCATACTTGATCCTCAGAAGAGA 2404
Query 1870 CTTACAGTGTCACAGGCATTAGCTCACCCATTCATCACGGGCAAATGA 1917
||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2405 ATTACAGTGTCACAGGCATTAGCTCACCCATTCATCACGGGCAAGTGA 2452
Score = 187 bits (101), Expect = 3e-46
Identities = 173/207 (84%), Gaps = 7/207 (3%)
Strand=Plus/Plus
Query 423 TTCTGTAAAAGGCCATAAACCTAACGGTTGCAG-TTTCCAAGAAACTCAAGGCAACGTTG 481
||||||||| |||||| | |||||| || || | | || ||||||||| || || ||||
Sbjct 841 TTCTGTAAATGGCCATGATCCTAACAGTGGC-GATGTCAAAGAAACTCGGGGAAATGTTG 899
Query 482 AAAAG-TCAGAAACTGATAATGATGATGAAGGTGATGATGTTGTTTGGGAAGTTGAAGAA 540
||| | ||| || ||||||||||||| ||||||| | |||||||||||||||| |||
Sbjct 900 AAAGGACCAG-AATTGATAATGATGATAAAGGTGACGTTGTTGTTTGGGAAGTT---GAA 955
Query 541 CAAGAAGCTTTAGACCTGAATAGAATCGAGGAAAGCAGGAGGATTACGCAAGCCATATTG 600
||||||| | ||| || ||| |||||||||||||||||||| |||||||||||| ||
Sbjct 956 CAAGAAGATGAAGAGCTAAATTTAATCGAGGAAAGCAGGAGGAGAACGCAAGCCATAATG 1015
Query 601 GAGAAATATAAGAAAAAGTTGGAGCAG 627
|||||||||||||||||||||||||||
Sbjct 1016 GAGAAATATAAGAAAAAGTTGGAGCAG 1042
> AT3G25840.1 | Symbols: | Protein kinase superfamily protein
| chr3:9451861-9457554 REVERSE LENGTH=3414
Length=3414
Score = 935 bits (506), Expect = 0.0
Identities = 946/1151 (82%), Gaps = 59/1151 (5%)
Strand=Plus/Plus
Query 798 TGACATG-TTCAGTGATGATATCTTTGGGGAGTCTCCAGCTGCTGGTACT-CGGAAA--- 852
||||||| |||| ||||||||||||||| ||||| || | ||||||| | || |||
Sbjct 1794 TGACATGTTTCA-TGATGATATCTTTGGAGAGTC-CC--CGGCTGGTA-TCCGAAAAGTG 1848
Query 853 GGA---AATGG-CCT--TGTTCCTTTTGTAAGGAGTGGACTCCATGATAATTGGGATGAT 906
||| || || | |||||| | || ||||| || || ||||||||||||||||||
Sbjct 1849 GGAGGGAAAGGTGATGGTGTTCCCATGGTGAGGAGCGGGCTTCATGATAATTGGGATGAT 1908
Query 907 GCAGAAGGATACTACAGTTATCAGTTTGGTGAACTACTTGATGATAGGTATGAAATCATG 966
||||| || || || || ||||||||||| || ||||||||| ||| |||||| ||||
Sbjct 1909 GCAGAGGGTTATTATAGCTATCAGTTTGGCGAGTTACTTGATGGTAGATATGAAGTCATT 1968
Query 967 GCTACTCATGGAAAAGGTGTCTTCTCTACCGTGGTGCGGGCAAAAGACACAAAACCTGAA 1026
||||||||||||||||||||||||||||| ||||| || || |||||| ||| ||| |
Sbjct 1969 GCTACTCATGGAAAAGGTGTCTTCTCTACTGTGGTTCGTGCTAAAGACTTGAAAGCTGGA 2028
Query 1027 CTAGCTGAACCTGAGGAAGTGGCTATAAAATTTATTCGGAACAATGAGACAATGCATAAG 1086
| |||||||||||| || ||||| |||||| |||| || ||||||||||| ||||||||
Sbjct 2029 CCAGCTGAACCTGAAGAGGTGGCAATAAAAATTATCCGTAACAATGAGACGATGCATAAA 2088
Query 1087 GCTGGCCAGGCTGAGATTCGGATATTGAAGAAGCTAGCTGGCTCTGACCCAGAGAATA-A 1145
||||| || |||| ||| |||||||||||||| || ||| |||| || ||||| | |
Sbjct 2089 GCTGGAAAGATTGAGGTTCAAATATTGAAGAAGCTGGCAGGCGCTGA-CC-GAGAAGACA 2146
Query 1146 -GCGCCACTGCGTCCG-TCTTCTTTCAA-CTTTTAAATATAGGAACCACCTTTGCTTGGT 1202
||||||||| || || | ||||||||| | ||||| || | || ||||||||||||||
Sbjct 2147 GGCGCCACTGTGTTCGAT-TTCTTTCAAGC-TTTAAGTACCGTAATCACCTTTGCTTGGT 2204
Query 1203 GTTTGAGTCTCTTCATCTGAATCTCCGTGAAGT-TGTGAAGAAGATTGGT-GTCAACATT 1260
||||||||| || ||| ||||||| ||||| || | |||||||| ||||| | |||||||
Sbjct 2205 GTTTGAGTCGCTCCATTTGAATCTTCGTGAGGTCT-TGAAGAAGTTTGGTCG-CAACATT 2262
Query 1261 GGTCTAAAACTATCTGATGTTAGAG-TGTATGCTGAGCAGTTATTCATAT-CCCTTAAAC 1318
||||| |||| |||| |||||| | | ||| | ||||| ||||||| | | |||||||
Sbjct 2263 GGTCTCCAACTCTCTGCTGTTAGGGCT-TATTCAAAGCAGCTATTCAT-TGCTCTTAAAC 2320
Query 1319 ATCTCAAGAATTGTGGGGTTCTTCACTGCGATATAAAGCCTGACAACATACTAGTGAATG 1378
|||| |||||||||||||| ||||||||||||||||| ||||||||||| || || ||||
Sbjct 2321 ATCTGAAGAATTGTGGGGTACTTCACTGCGATATAAAACCTGACAACATGCTGGTCAATG 2380
Query 1379 AGGGGAGAAACATG--TTAAAGCTTTGTGACTTTGGTAGTGCAATGTTTGCTGGTGAAAA 1436
|||||| ||| ||| |||||||||||||| ||||||| |||||||||||| || ||||
Sbjct 2381 AGGGGA-AAA-ATGTCTTAAAGCTTTGTGATTTTGGTAATGCAATGTTTGCAGGCAAAAA 2438
Query 1437 CCAAGTTACACCATATCTTGTTAGTCGCTTCTACAGAGCTCCAGAAATCATTCTTGGACT 1496
| |||||||||| ||||||||||||||||| |||||| | || ||||| ||||| || ||
Sbjct 2439 CGAAGTTACACCGTATCTTGTTAGTCGCTTTTACAGATCCCCTGAAATTATTCTGGGGCT 2498
Query 1497 -ATCCTACGACCATCCGTTAGATATCTGGTCTGTGGGTTGTTGCCTGTATGAGCTTTATA 1555
| |||| ||||||||||| ||||| |||||||| || || || ||||||||||||||||
Sbjct 2499 CA-CCTATGACCATCCGTTGGATATATGGTCTGTTGGCTGCTGTCTGTATGAGCTTTATA 2557
Query 1556 GCGGGAAAA-TTATGTTCCCTGGCTCCACAAACAATGATATGTTACGCCTTCATATGGAA 1614
| |||||| || | ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2558 G-TGGAAAAGTTCTTTTCCCTGGCGCCACAAACAATGATATGTTACGCCTTCATATGGAA 2616
Query 1615 CTGAAAGGTCCCTTCCCTAAAAAGATGCTTCGCAAAGGAGCATTTATCGATCAGCACTTC 1674
||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 2617 CTGAAAGGTCCCTTCCCTAAAAAGATGCTTCGCAAGGGAGCATTTATTGATCAGCACTTT 2676
Query 1675 GATAAGGACTT-ATGCTTCTATGCTACAGAGGAGGATAGTGTTACTGGAAAGACC-ATAA 1732
||| | ||||| | ||| |||||||||||||| || | |||| ||||||| | ||||
Sbjct 2677 GATCATGACTTGAA-CTTTTATGCTACAGAGGAAGACACCGTTAGTGGAAAG-CTGATAA 2734
Query 1733 GGAGAATAATGGTAAACATAAAGCCAAAAGATTTAGGTTC-AGTAATTAGACGACGTTAT 1791
||||| || |||||| | ||||| |||||||| ||||| | | |||| | | ||||
Sbjct 2735 AAAGAATGATCGTAAACGTGAAGCCGAAAGATTTTGGTTCCA-TCATTAAA-G--GTTAC 2790
Query 1792 GA-GGATGAAGATCCCAA-AGTGTTGGTTCATTTCAGGAATCTTCT-GGACAAAATTTTC 1848
|| ||| |||||||| | | || | |||||||||| |||| || ||||||||| |||
Sbjct 2791 CCTGG-TGAGGATCCCAAGA-TCTTAGCTCATTTCAGGGATCT-CTTGGACAAAATGTTC 2847
Query 1849 A-CACTTGATCCTCAAAAG-AGACTTACAGTGTCACAGGCATTAGCTCACCCATTCATCA 1906
| | |||||||| | | || ||||| || |||||||||||||||||||||||||||||||
Sbjct 2848 ATC-CTTGATCC-CGAGAGGAGACTGACTGTGTCACAGGCATTAGCTCACCCATTCATCA 2905
Query 1907 CGGGCAAATGA 1917
| ||||| |||
Sbjct 2906 CTGGCAAGTGA 2916
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 94929230595
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5