BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg485830 Length=1397 Score E Sequences producing significant alignments: (Bits) Value AT3G54320.1 | Symbols: WRI1, WRI, ASML1, ATWRI1 | Integrase-typ... 2023 0.0 > AT3G54320.1 | Symbols: WRI1, WRI, ASML1, ATWRI1 | Integrase-type DNA-binding superfamily protein | chr3:20114684-20118627 FORWARD LENGTH=1470 Length=1470 Score = 2023 bits (1095), Expect = 0.0 Identities = 1269/1350 (94%), Gaps = 24/1350 (2%) Strand=Plus/Plus Query 72 TTTCCCAGATTTTAATGAAGAGGCGCTTAACCacttccacttcttcttcttctccatctt 131 |||| |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct 112 TTTCTCAGAGTTTAATGAAGAAGCGCTTAACCACTTCCACTTGTTCTTCTTCTCCATCTT 171 Query 132 cctctgtttcttcttctactactacttcctctcctattcAATCGGAGGCTCCCAGGCCTA 191 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct 172 CCTCTGTTTCTTCTTCTACTACTACTTCCTCTCCTATTCAGTCGGAGGCTCCAAGGCCTA 231 Query 192 AACGAGCCAAAAGGGCTAAGAAATCTTCTCCTTCTGGTGATAAATCACATAACCCGACAA 251 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 232 AACGAGCCAAAAGGGCTAAGAAATCTTCTCCTTCTGGTGATAAATCTCATAACCCGACAA 291 Query 252 GCCCTGCTTCTACCAGACGCAGCTCTATCTACAGAGGAGTCACTAGACATAGATGGACTG 311 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 292 GCCCTGCTTCTACCCGACGCAGCTCTATCTACAGAGGAGTCACTAGACATAGATGGACTG 351 Query 312 GGAGATTCGAGGCTCATCTTTGGGACAAAAGCTCTTGGAATTCGATTCAGAACAAGAAAG 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 352 GGAGATTCGAGGCTCATCTTTGGGACAAAAGCTCTTGGAATTCGATTCAGAACAAGAAAG 411 Query 372 GCAAAC-A----A----GGAGCATATGACAGCGAAGAAGCAGCAGCACATACGTACGATC 422 |||||| | | |||||||||||||| |||||||||||||||||||||||||||| Sbjct 412 GCAAACAAGTTTATCTGGGAGCATATGACAGTGAAGAAGCAGCAGCACATACGTACGATC 471 Query 423 TGGCTGCTCTCAAGTACTGGGGACCCGATACCATCTTGAATTTTCCGGCAGAGACGTACA 482 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 472 TGGCTGCTCTCAAGTACTGGGGACCCGACACCATCTTGAATTTTCCGGCAGAGACGTACA 531 Query 483 CAAAGGAATTGGAAGAAATGCAGAGAGTGACAAAGGAAGAATATTTGGCTTCTCTCCGCC 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 532 CAAAGGAATTGGAAGAAATGCAGAGAGTGACAAAGGAAGAATATTTGGCTTCTCTCCGCC 591 Query 543 GCCAGAGCAGTGGTTTCTCCAGAGGCGTCTCTAAATATCGCGGCGTCGCTAGGCATCACC 602 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 592 GCCAGAGCAGTGGTTTCTCCAGAGGCGTCTCTAAATATCGCGGCGTCGCTAGGCATCACC 651 Query 603 ATAACGGAAGATGGGAGGCTCGGATTGGAAGAGTGTTTGGGAACAAGTACTTGTACCTCG 662 | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 652 ACAACGGAAGATGGGAGGCTCGGATCGGAAGAGTGTTTGGGAACAAGTACTTGTACCTCG 711 Query 663 GCACCTACAATACGCAGGAGGAAGCTGCTGCGGCGTATGATATGGCGGCGATAGAGTATC 722 ||||||| ||||||||||||||||||||||| || ||||| ||||| ||||| ||||||| Sbjct 712 GCACCTATAATACGCAGGAGGAAGCTGCTGCAGCATATGACATGGCTGCGATTGAGTATC 771 Query 723 GAGGGGCTAACGCGGTTACTAATTTCGACATTAGTAATTACATCGACCGGTTAAAGAAGA 782 |||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 772 GAGGCGCAAACGCGGTTACTAATTTCGACATTAGTAATTACATTGACCGGTTAAAGAAGA 831 Query 783 AAGGTGTTTTCCCGTTCCCTGTGAACCAACCTAATCATCAAGAGGCTATTCTTGTTGAAG 842 ||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||| Sbjct 832 AAGGTGTTTTCCCGTTCCCTGTGAACCAAGCTAACCATCAAGAGGGTATTCTTGTTGAAG 891 Query 843 CCAAACAAGAAATCGAAACGAGAGAAGCTAAAGAAGAGCCTagagaagaagtgaaacaac 902 ||||||||||| | |||||||||||||| || |||||||||||||||||||||||||||| Sbjct 892 CCAAACAAGAAGTTGAAACGAGAGAAGCGAAGGAAGAGCCTAGAGAAGAAGTGAAACAAC 951 Query 903 agtacgtggaagaaccaccacaagaaga-gaa-agaag-aaga-ga-aa-gcagagcaac 956 ||||||||||||||||||| |||||||| ||| ||||| |||| || || |||||||||| Sbjct 952 AGTACGTGGAAGAACCACCGCAAGAAGAAGAAGAGAAGGAAGAAGAGAAAGCAGAGCAAC 1011 Query 957 aagaagcagagTTTGTAGGATATAAAGATGAAGGGGCGGTGGTCAATTGCTGCATAGACT 1016 ||||||||||| ||||||||||| ||| |||| || |||||||||||||||||||||| Sbjct 1012 AAGAAGCAGAGATTGTAGGATATTCAGAAGAAGCAGCAGTGGTCAATTGCTGCATAGACT 1071 Query 1017 CTTCAGCCATAATGGAAATGAATCGTTGTGGGGACAACAATGAGCTGGCTTGGAACTTCT 1076 ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1072 CTTCAACCATAATGGAAATGGATCGTTGTGGGGACAACAATGAGCTGGCTTGGAACTTCT 1131 Query 1077 GTATGATGGATTCAGGGTTTGCTCCGTTTTTGACGGATCAGAATCTCTCGAATGAGAATC 1136 ||||||||||| |||||||| ||||||||||||| |||||||||||| |||||||||||| Sbjct 1132 GTATGATGGATACAGGGTTTTCTCCGTTTTTGACTGATCAGAATCTCGCGAATGAGAATC 1191 Query 1137 CCATCGAGTATCCGGAGCTTTTCAATGAGTTAGCATTTGAGGATAACATTGACTTCATGT 1196 |||| |||||||||||||| ||||||||||||||||||||||| ||||| |||||||||| Sbjct 1192 CCATAGAGTATCCGGAGCTATTCAATGAGTTAGCATTTGAGGACAACATCGACTTCATGT 1251 Query 1197 TCGACGAAGCGAAGAACGACTGCTTGAGCTTGGAAAATCTGGATTGTTGCGTGGTGGGAA 1256 |||| || | |||| |||| ||||||| |||||||||||||||||||||||||||||||| Sbjct 1252 TCGATGATGGGAAGCACGAGTGCTTGAACTTGGAAAATCTGGATTGTTGCGTGGTGGGAA 1311 Query 1257 GAGAGAGCCCAACTTCTTCGTCTTCACCATTGTCTTGCTTTTCTACTGACTCTGCTTCAT 1316 ||||||||||| | ||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct 1312 GAGAGAGCCCACCCTCTTCTTCTTCACCATTGTCTTGCTTATCTACTGACTCTGCTTCAT 1371 Query 1317 CAACAACAACAACAAC--C-TCGGTTTCTTGTAACTATTTG-----GG-CTTGTTCGTTG 1367 |||||||||||||||| | ||||||||||||||||||||| || ||||||||||| Sbjct 1372 CAACAACAACAACAACAACCTCGGTTTCTTGTAACTATTTGTTTCAGGGCTTGTTCGTTG 1431 Query 1368 GTTCCGAATAATCAATGTCTTTGCCCCTTT 1397 |||| ||||||||||||||||||||||||| Sbjct 1432 GTTCTGAATAATCAATGTCTTTGCCCCTTT 1461 Score = 111 bits (60), Expect = 1e-23 Identities = 70/74 (95%), Gaps = 4/74 (5%) Strand=Plus/Plus Query 1 CAGGGTTTATTTAACTTGCCCTTTCTCGTTTCCTCCtttttttCTTAAACCACTCT--T- 57 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1 CAGGGTTTATTTAACTTGCCCTTTCTCGTTTCCTCCTTTTTTTCTTAAACCACTCTGCTT 60 Query 58 CCTTCTTCCTCTGA 71 ||| |||||||||| Sbjct 61 CCT-CTTCCTCTGA 73 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 68824947195 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5