BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg485863
Length=1783
Score E
Sequences producing significant alignments: (Bits) Value
AT3G54610.1 | Symbols: HAT1, GCN5, HAG1, HAC3, HAG01, BGT | his... 2920 0.0
> AT3G54610.1 | Symbols: HAT1, GCN5, HAG1, HAC3, HAG01, BGT | histone
acetyltransferase of the GNAT family 1 | chr3:20213560-20217653
FORWARD LENGTH=2018
Length=2018
Score = 2920 bits (1581), Expect = 0.0
Identities = 1693/1749 (97%), Gaps = 0/1749 (0%)
Strand=Plus/Plus
Query 1 GATTTGCTCAATCACCTTCACTATTCTGCTTCAATGGACTCTCACTCTTCCCACCTCAAC 60
||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct 1 GATTTTCTCAATCACCTTCACTATACTGCTTCGATGGACTCTCACTCTTCCCACCTCAAC 60
Query 61 GCGGCCAATCGTTCCCGCAGCTCTCAGACTCCTTCTCCTTCTCATTCCGCCTCCGCCTCC 120
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 61 GCCGCCAATCGTTCCCGCAGTTCTCAGACTCCTTCTCCTTCTCATTCCGCCTCCGCCTCC 120
Query 121 GTCACTTCTTCTCTCCACAAGCGCAAACTCGCCGCCACTACGGCAGCGAATGCAGCCGCG 180
|||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 121 GTCACTTCTTCTCTCCACAAACGCAAACTCGCCGCCACCACGGCAGCGAATGCAGCCGCT 180
Query 181 TCTGAAGATCACGCCCCTCCTTCTACCTCTTTCCCTCCTTCCTCCTTCTCTGCCGATACT 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 181 TCTGAAGATCACGCCCCTCCTTCTTCCTCTTTCCCTCCTTCCTCCTTCTCTGCCGATACT 240
Query 241 CGCGACGGCCCATTAACCTCCAACGATGAACTCGAGAGCATCTCCGCTCGCGGCGCTGAT 300
||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 241 CGCGACGGCGCTTTAACCTCCAACGATGAACTCGAGAGCATCTCCGCTCGCGGCGCCGAT 300
Query 301 ACAGATTCAGACCCTGATGAATCAGAAGATATCGTCGTGGACGATGACGAGGACGAATTT 360
||||||||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||
Sbjct 301 ACAGATTCAGATCCTGATGAATCAGAGGATATAGTCGTGGATGATGACGAGGACGAATTT 360
Query 361 GCTCCTGAACAGGACCAGGACTCTTCTATCCGCACTTTCACCGCCGCTCGACTCGATTCC 420
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 361 GCTCCTGAACAGGACCAGGACTCTTCTATCCGCACATTCACCGCCGCTCGACTCGATTCC 420
Query 421 AGCTCAGGAGTCAACGGTTCGAGTCGTAACACTAAGCTTAAGACGGAGAGCTCCACGGTT 480
||||| |||||||||||||||||||| |||||||| ||||||||||| |||||||||||
Sbjct 421 AGCTCTGGAGTCAACGGTTCGAGTCGCAACACTAAACTTAAGACGGAAAGCTCCACGGTG 480
Query 481 AAGCTTGAGAGCTCTGATGGTGGAAAGGATGGTGGATCATCTGTGGTTGGGACTGGTGTT 540
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 481 AAGCTTGAGAGCTCTGATGGTGGAAAAGATGGTGGATCATCTGTGGTTGGGACTGGTGTG 540
Query 541 AGTGGCACTGTTGGAGGAAGCTCAATCTCAGGGCTGGTGCCAAAGGATGAGTCTGTTAAG 600
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 541 AGTGGCACTGTTGGAGGAAGCTCAATCTCAGGGCTCGTGCCAAAGGATGAGTCTGTTAAG 600
Query 601 GTATTGGCTGAGAATTTTCAGACTAGCGGAGCTTACATTGCGAGAGAAGAGACTTTGAAA 660
||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct 601 GTATTGGCTGAGAATTTCCAGACTAGCGGAGCTTACATTGCCAGAGAAGAGGCTTTGAAA 660
Query 661 AGAGAGGAGCAATCAGGACGACTCAAATTTGTTTGTTACTCAAATGATTGCATTGATGAG 720
|||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 661 AGAGAGGAGCAAGCAGGACGACTCAAATTTGTTTGTTACTCAAATGATTCCATTGATGAG 720
Query 721 CATATGATGTGCTTGGTTGGGTTGAAGAACATTTTTGCAAGACAGTTGCCTAATATGCCC 780
||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 721 CATATGATGTGCTTGATTGGGTTGAAGAACATTTTTGCAAGACAGTTACCTAATATGCCC 780
Query 781 AAGGAGTACATTGTTCGTCTTCTGATGGATAGGAAACATAAGTCTGTTATGGTCCTAAGA 840
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 781 AAGGAGTACATTGTTCGTCTTCTGATGGATAGGAAACATAAGTCTGTTATGGTACTAAGA 840
Query 841 GGAAATCTAGTTGTAGGTGGTATCACGTATCGTCCATATCGCAGTCAGAAGTTTGGAGAA 900
|| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct 841 GGGAATCTAGTTGTAGGTGGTATCACGTATCGTCCATATCACAGTCAGAAGTTTGGGGAA 900
Query 901 ATAGCATTTTGTGCAATCACAGCAGATGAACAAGTAAAAGGTTATGGTACCAGATTGATG 960
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 901 ATAGCATTTTGTGCAATCACAGCAGATGAACAAGTAAAAGGTTACGGTACCAGATTGATG 960
Query 961 AACCACTTGAAACAACATGCACGTGATGTTGATGGATTGACGCATTTTCTTACTTATGCT 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 AACCACTTGAAACAACATGCACGTGATGTTGATGGATTGACGCATTTTCTTACTTATGCT 1020
Query 1021 GACAACAATGCTGTTGGTTACTTTGTCAAGCAGGGTTTTACTAAAGAGATTTACTTGGAG 1080
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1021 GACAACAATGCTGTTGGTTACTTCGTCAAGCAGGGTTTTACTAAAGAGATTTACTTGGAG 1080
Query 1081 AAAGATGTATGGCATGGGTTCATTAAAGACTATGATGGTGGTCTCCTTATGGAATGCAAA 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1081 AAAGATGTATGGCATGGGTTCATTAAAGACTATGATGGTGGTCTCCTTATGGAATGCAAA 1140
Query 1141 ATTGATCCAAAGCTTCCATATACGGATTTGTCAAGCATGATACGCCAGCAAAGAAAGGCA 1200
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1141 ATTGATCCAAAGCTGCCATATACGGATTTGTCAAGCATGATACGCCAGCAAAGAAAGGCA 1200
Query 1201 ATTGATGAAAGGATAAGAGAGTTATCAAACTGTCAGAATGTGTATCCAAAAATTGAGTTT 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1201 ATTGATGAAAGGATAAGAGAGTTATCAAACTGTCAGAATGTGTATCCAAAAATTGAGTTT 1260
Query 1261 CTAAAGAATGAAGCTGGAATTCCTAGAAAGATTATCAAAGTTGAGGAAATTCGTGGCTTA 1320
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1261 CTAAAGAATGAAGCTGGAATTCCTAGAAAGATTATCAAAGTTGAGGAAATACGTGGCTTA 1320
Query 1321 AGGGAAGCTGGTTGGACCCCAGATCAGTGGGGGCACACTCGATTCAAATTATTCAATTGT 1380
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct 1321 AGGGAAGCTGGTTGGACCCCAGATCAGTGGGGGCACACTCGTTTCAAATTATTCAATGGT 1380
Query 1381 TCTGCAGATATGGCGACAAATCAAAAACAGTTGAATGCACTCATGCGTGCGCTTTTAAAG 1440
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1381 TCTGCTGATATGGTGACAAATCAAAAACAGTTGAATGCACTCATGCGTGCGCTTTTAAAG 1440
Query 1441 ACAATGCAAGACCATGCTGATGCTTGGCCTTTCAAAGAACCAGTCGATTCTCGCGATGTC 1500
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1441 ACAATGCAAGACCATGCTGATGCTTGGCCTTTCAAAGAACCAGTGGATTCTCGCGATGTC 1500
Query 1501 CCTGATTACTATGATATCATTAAAGATCCCATTGATCTGAAGGTTATCGCAAAGAGGGTA 1560
|||||||||||||| |||||||| |||||||||||||||||||| || ||||||||||||
Sbjct 1501 CCTGATTACTATGACATCATTAAGGATCCCATTGATCTGAAGGTAATTGCAAAGAGGGTA 1560
Query 1561 GAATCGGAACAGTATTACGTGACACTCGATATGTTTGTTGCTGATGCGAGACGGATGTTT 1620
|| ||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||
Sbjct 1561 GAGTCGGAACAGTATTACGTGACATTGGATATGTTTGTTGCGGATGCGAGACGGATGTTT 1620
Query 1621 AACAATTGTAGAACTTACAATTCCCCCGATACCATTTATTACAAATGTGCAACCAGGTTG 1680
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1621 AACAATTGTAGAACTTACAACTCCCCCGATACCATTTATTACAAATGTGCAACCAGGTTG 1680
Query 1681 GAAACACACTTCCATAGCAAAGTACAAGCAGGTCTCCAGTCTGGTGCTAAATCTCAATAG 1740
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1681 GAAACACACTTCCATAGCAAAGTACAAGCAGGTCTCCAATCTGGTGCTAAATCTCAATAG 1740
Query 1741 AAGAACATG 1749
||||| |||
Sbjct 1741 AAGAAGATG 1749
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 88202357565
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5