BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg485875 Length=1608 Score E Sequences producing significant alignments: (Bits) Value AT3G54700.1 | Symbols: PHT1;7 | phosphate transporter 1;7 | chr... 2483 0.0 AT2G38940.1 | Symbols: ATPT2, PHT1;4 | phosphate transporter 1;... 1315 0.0 > AT3G54700.1 | Symbols: PHT1;7 | phosphate transporter 1;7 | chr3:20248425-20250070 REVERSE LENGTH=1646 Length=1646 Score = 2483 bits (1344), Expect = 0.0 Identities = 1528/1617 (94%), Gaps = 12/1617 (1%) Strand=Plus/Plus Query 1 ATGGCAGGAGATCAACTAAACGTGCTAAACGCACTCGACGTCGCCAAAACACAGTGGTAC 60 |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 1 ATGGCAGGAGATCAACTAAACGTGCTAAACGCACTCGACGTCGCCAAAACGCAATGGTAC 60 Query 61 CATTTCACTGCGATTATCATCGCCGGAATGGGATTCTTCACCGACGCTTACGACCTTTTT 120 |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CATTTCACGGCGATTATAATCGCCGGAATGGGATTCTTCACCGACGCTTACGACCTTTTT 120 Query 121 TGTATCTCCCTCGTCACTAAGCTTCTTGGCCGCATTTACTACCACGTGGACGG-TGCGGA 179 |||||||| |||||||| |||||||||||||| |||||||| ||||||||||| | | || Sbjct 121 TGTATCTCACTCGTCACAAAGCTTCTTGGCCGTATTTACTATCACGTGGACGGCT-CAGA 179 Query 180 GAAGCCAGGAACGCTGCCTCCAAACGTCTCGGCCGCTGTTAATGGCGTCGCCTTCTGCGG 239 |||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||| Sbjct 180 GAAGCCAGGAACGCTGCCACCAAACGTCTCAGCCGCTGTTAATGGAGTCGCCTTCTGCGG 239 Query 240 TACACTCGCCGGCCAGCTCTTCTTTGGCTGGCTCGGCGACAAGCTTGGGAGGAAAAAAGT 299 ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 240 TACACTCGCAGGCCAGCTCTTCTTTGGCTGGCTCGGTGACAAGCTTGGGAGGAAAAAAGT 299 Query 300 TTACGGTATGACCCTCATGGTCATGGTCCTTTGTTCCATCGCCTCGGGTCTATCCTTTGG 359 ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct 300 TTACGGTATGACCCTCATGGTCATGGTTCTTTGTTCCATCGCTTCGGGTCTATCCTTTGG 359 Query 360 GAGTGACCCGAAAACGGTGATGACTACGCTCTGTTTCTTCCGGTTCTGGCTTGGTTTTGG 419 |||| |||| ||||| ||||||||||| || |||||||||||||||||||||||||| || Sbjct 360 GAGTAACCCAAAAACAGTGATGACTACACTATGTTTCTTCCGGTTCTGGCTTGGTTTCGG 419 Query 420 CATAGGAGGTGATTATCCGTTATCTGCCACGATTATGTCTGAATACGCCAATAAAAAGAC 479 ||| || ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct 420 CATTGGTGGTGATTATCCGTTATCCGCCACGATTATGTCTGAATACGCTAATAAAAAGAC 479 Query 480 CCGCGGTGCGTTTATAGCAGCGGTTTTTGCTATGCAAGGGTTTGGAATCTTGA-CGGGGG 538 ||| |||||||||||||| || ||||||||||||||||||||||||||||||| |||||| Sbjct 480 CCGTGGTGCGTTTATAGCCGCCGTTTTTGCTATGCAAGGGTTTGGAATCTTGACCGGGGG 539 Query 539 GTATTTTTGCCATCATCGTGGCTGCCGCTTTCGAGGCTAAGTTTCCGGCTCCTATCTAT- 597 | |||||||||||||||||| ||||||||||||||||||| ||||| ||||| | |||| Sbjct 540 G-ATTTTTGCCATCATCGTGTCTGCCGCTTTCGAGGCTAAATTTCCAGCTCCAACCTATC 598 Query 598 AAAGTTGATGCCTTGGCATCCACAGTTCCCCAAGCGGATTACGTGTGGCGGATCATTCTC 657 ||| | ||||||||||||||||| ||||| || |||||||| |||||||||||||| || Sbjct 599 AAA-TAGATGCCTTGGCATCCACGGTTCCTCAGGCGGATTATGTGTGGCGGATCATACTG 657 Query 658 ATGGTGGGTGCTTTGCCTGCCGCAATGACGTATTACTCGAGGTCGAAGATGCCTGAGACC 717 |||||||||||||||||||| || |||||||||||||| ||||| |||||||||||||| Sbjct 658 ATGGTGGGTGCTTTGCCTGCAGCGATGACGTATTACTCAAGGTCCAAGATGCCTGAGACT 717 Query 718 GCCCGGTACACGGCTCTTGTGGCCAAGGATGCGAAACTAGCGGCTTCAAACATGTCTAAG 777 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 718 GCCCGGTACACGGCTCTTGTGGCCAAGGACGCGAAACTAGCGGCTTCAAACATGTCTAAG 777 Query 778 GTTTTGCAAGTGGAGATCGAAGCAGAGCAGCAGAGAAGTGAAGATAAGTCCAATTCCTTT 837 ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct 778 GTTTTGCAAGTGGAGATCGAAGCAGAGCAGCAGGGAACTGAAGATAAGTCCAATTCCTTT 837 Query 838 GGCTTGTTTTCCAAGGAATTCATGAAACGTCATGGCCTTCATTTGCTCGGAACCACAAGC 897 ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||| Sbjct 838 GGCTTGTTTTCCAAGGAATTCATGAAACGCCATGGCCTTCATTTGCTAGGAACTACAAGC 897 Query 898 ACATGGTTCCTACTCGACATCGCCTTCTACAGCCAGAACCTTTTCCAGAAAGATATTTTC 957 |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct 898 ACATGGTTCCTACTCGACATCGCCTTCTACAGTCAGAACCTATTCCAGAAAGATATTTTC 957 Query 958 AGCGCGATCGGATGGATTCCTCCGGCTCAGACCATGAACGCGATTCAAGAGGTTTTCAAG 1017 ||||| ||||||||||| |||||||||||||| |||||||| |||||||||||||||||| Sbjct 958 AGCGCAATCGGATGGATCCCTCCGGCTCAGACAATGAACGCAATTCAAGAGGTTTTCAAG 1017 Query 1018 ATTGCACGTGCGCAAACCCTAATCGCCTTGTGCAGCACGGTACCCGGTTACTGGTTCACA 1077 ||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct 1018 ATTGCACGTGCACAAACCCTAATCGCCTTGTGTAGCACGGTACCTGGTTACTGGTTCACA 1077 Query 1078 GTGGCCTTCATCGACGTCATAGGTAGATTTGCGATACAGATGATGGGTTTCTTCTTCATG 1137 |||||||| || |||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 1078 GTGGCCTTTATTGACGTCATTGGTAGATTTGCGATACAGATGATGGGTTTCTTCTTTATG 1137 Query 1138 ACCGTCTTTATGTTCGCTCTCGCCATTCCTTACGACCATTGGACTCACAAGGAGAACAGA 1197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1138 ACCGTCTTTATGTTCGCTCTCGCCATTCCTTACGACCATTGGACTCACAAGGAGAACAGA 1197 Query 1198 ATCGGATTCGTGGCTATGTACTCTCTAACATTCTTCTTCGCCAACTTTGGACCCAATGCT 1257 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1198 ATCGGATTCGTTGCTATGTACTCTCTAACATTCTTCTTCGCCAACTTTGGACCTAATGCA 1257 Query 1258 ACTACCTTCGTTGTGCCGGCTGAGATTTTCCCGGCTAGGTTTAGATCAACCTGTCATGGA 1317 || || ||||||||||| |||||||| |||||||||||||||||||||||||| |||||| Sbjct 1258 ACAACTTTCGTTGTGCCCGCTGAGATCTTCCCGGCTAGGTTTAGATCAACCTGCCATGGA 1317 Query 1318 ATTTCCGCGGCTTCTGGAAAGTTGGGAGCAATGGTTGGTGCGTTTGGGTTCTTGTACTTA 1377 |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct 1318 ATTTCCGCGGCTTCTGGAAAATTAGGAGCAATGGTTGGTGCGTTTGGGTTCTTGTACTTA 1377 Query 1378 GCACAAAGTCCTGACAAGACCAAGACAGAGCATGGATATCCTCCAGGCATTGGAGTCAAG 1437 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1378 GCACAAAGTCCTGACAAGACCAAGACAGAGCATGGATATCCTCCAGGTATTGGAGTCAAG 1437 Query 1438 AACTCGCTCATTGTTTTGGGTGTGGTTAATCTTTTGGGGATGGTTTTTACACTGTTGGTT 1497 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1438 AACTCCCTCATTGTTTTGGGTGTGGTTAATCTTTTGGGGATGGTTTTTACACTGTTGGTT 1497 Query 1498 CCTGAATCTAAAGGCAAGTCTCTCGAGGAAATGTCCGGTGAGAACGAACAAAATGATGAA 1557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1498 CCTGAATCTAAAGGCAAGTCTCTCGAGGAAATGTCCGGTGAGAACGAACAAAATGATGAA 1557 Query 1558 AGCAGCAGCA--A-CAACAACA---GTAACAACGCAGTGTCAACTGCATAGAGAATT 1608 |||||||||| | |||||||| |||||||||||||||||||||||||||||||| Sbjct 1558 AGCAGCAGCAGCAGCAACAACAACAGTAACAACGCAGTGTCAACTGCATAGAGAATT 1614 > AT2G38940.1 | Symbols: ATPT2, PHT1;4 | phosphate transporter 1;4 | chr2:16257228-16260225 FORWARD LENGTH=1900 Length=1900 Score = 1315 bits (712), Expect = 0.0 Identities = 1309/1594 (82%), Gaps = 54/1594 (3%) Strand=Plus/Plus Query 1 ATGGC-AGGAGATCAACTA-AACGTGCTAAACGCACTCGACGTCGCCAAAACACAGTGGT 58 ||||| ||| || ||| || || ||| | || ||||| ||||| ||||| || || |||| Sbjct 175 ATGGCAAGG-GAACAATTACAA-GTGTTGAATGCACTTGACGTGGCCAAGACGCAATGGT 232 Query 59 ACCATTTCACTGCGATTATCATCGCCGGAATGGGATTCTTCACCGACGCTTACGACCTTT 118 |||||||||| ||||| || ||||||||||||||||||||||| || |||||||| || | Sbjct 233 ACCATTTCACGGCGATCATAATCGCCGGAATGGGATTCTTCACTGATGCTTACGATCTCT 292 Query 119 TTTGTATCTCCCTCGTCACTAAGCTTCTTGGCCGCATTTACTACCACGTGGACGGTGCGG 178 |||| ||||| ||||| || ||||| || || || ||||| ||||||||||| || || Sbjct 293 TTTGCATCTCTCTCGTAACGAAGCTCCTCGGTCGTATTTATTACCACGTGGAAGGCGCAC 352 Query 179 AGAAGCCAGGAACGCTGCCTCCAAACGTCTCGGCCGCTGTTAATGGCGTCGCCTTCTGCG 238 | ||||| || || || ||||| |||||| | ||||| || |||||||| |||||||| | Sbjct 353 AAAAGCCTGGGACTCTCCCTCCCAACGTCGCAGCCGCCGTCAATGGCGTTGCCTTCTGTG 412 Query 239 GTACACTCGCCGGCCAGCTCTTCTTT-GGCTGGCTCGGCGACAAGCTTGGGAGGAAAAAA 297 | || |||||||| |||||||| ||| || ||||| || || ||||| |||||||| ||| Sbjct 413 GGACTCTCGCCGGTCAGCTCTT-TTTCGGGTGGCTTGGTGATAAGCTCGGGAGGAAGAAA 471 Query 298 GTTTACGGTATGACCCTCATGGTCATGGTCCTTTGTTCCATCGCCTCGGGTCTATCCTTT 357 |||||||||||||| | |||||||||||||||||||| || ||||| ||||| | |||| Sbjct 472 GTTTACGGTATGACGTTGATGGTCATGGTCCTTTGTTCAATAGCCTCTGGTCTCT-CTTT 530 Query 358 GGGA-GTGACCCGAAAA-CGGTGATGACTACGCTCTGTTTCTTCCGGTTCTGGCTTGGTT 415 ||| ||| || |||| | |||||| | ||||||||||| || ||||| |||||||| | Sbjct 531 CGGACATGAGCC-AAAAGCTGTGATGGCCACGCTCTGTTTTTTTCGGTTTTGGCTTGGAT 589 Query 416 TTGGCATAGGAGGTGATTATCCGTTATCTGCCACGATTATGTCTGAATACGCCAATAAAA 475 ||||||| || ||||| || || ||||| || || || ||||||||||| || || || | Sbjct 590 TTGGCATCGGTGGTGACTACCCTTTATCCGCAACCATCATGTCTGAATATGCGAACAAGA 649 Query 476 AGACCCGCGGTGCGTTTATAGCAGCGGTTTTTGCTATGCAAGGGTTTGGAATCTTGACGG 535 |||| ||||| || ||| | | ||||||||||||||||||||||| |||||| || | | Sbjct 650 AGACTCGCGGAGCCTTTGTCTCTGCGGTTTTTGCTATGCAAGGGTTCGGAATCATGGCTG 709 Query 536 GGGGTATTTTTGCCATCAT-CGTGGCTGCCGCTTTCGAGGCTAAGTTTCCGGCTCCTATC 594 | |||||||| || || || | || | ||||| || ||||||||||| | || | Sbjct 710 GTGGTATTTTCGCTATTATAATTTCCT-CTGCTTTTGAAGCTAAGTTTCCATCCCCGGCC 768 Query 595 TATAAAGTTGATGCCTTGGCATCCACAG-TTCCCCAAGCGGATTACGTGTGGCGGATCAT 653 ||| | ||||||||||| |||||| | |||| ||||| |||| || |||||||| || Sbjct 769 TATGCGGATGATGCCTTGGGATCCAC-GATTCCTCAAGCTGATTTGGTATGGCGGATAAT 827 Query 654 TCTCATGG-TGGGTGCTTTGCCTGCCGCAATGACGTATTACTCGAGGTCGAAGATGCCTG 712 || |||| | |||||| | ||||| || |||||||||||||| |||||||||||||||| Sbjct 828 CCTGATGGCT-GGTGCTATCCCTGCGGCTATGACGTATTACTCAAGGTCGAAGATGCCTG 886 Query 713 AGACCGCCCGGTACACGGCTCTT-GTGGCCAAGGATGCGAAA-CTA-GCGGCTTCAAACA 769 ||||||| ||||||||||| || || || ||||| || ||| | | || ||||| ||| Sbjct 887 AGACCGCAAGGTACACGGCT-TTGGTTGCTAAGGACGC-AAAGC-AGGCAGCTTCGGACA 943 Query 770 TGTCTAAGGTTTTGCAAGTGGAGATCGAAG-CAGAGCAGCAG--A---G-A-AG---T-G 817 ||||||||||| ||||||||||||| | || |||| || ||| | | | || | Sbjct 944 TGTCTAAGGTTCTGCAAGTGGAGATAG-AGCCAGAACAACAGAAATTGGAAGAGATCTCA 1002 Query 818 AA-GATAAGTCCAATTCCTTTGGCTTGTTTTCCAAGGAATTCATGAAACGTCATGGCCTT 876 || || |||||||| ||||||| ||||| || ||||||||||||| || ||||| ||| Sbjct 1003 AAGGAGAAGTCCAAGGCCTTTGGATTGTTCTCAAAGGAATTCATGAGTCGCCATGGGCTT 1062 Query 877 CATTTGCTCGGAACCACAAGC-ACATGGTTCCTACTCGACATCGCCTTCTACAGCCAGAA 935 |||||||| || || || | | ||||||||||| |||||||| || |||||||| || || Sbjct 1063 CATTTGCTAGGCACTAC-ATCGACATGGTTCCTTCTCGACATTGCTTTCTACAGTCAAAA 1121 Query 936 CCTTTTCCAGAAA-GATATTTTCAGCGCGATCGGATGGATTCCTCCGGCTCAGACCATGA 994 ||||||||| ||| |||||||||||||||||||||||||||||||| || || | ||||| Sbjct 1122 CCTTTTCCA-AAAGGATATTTTCAGCGCGATCGGATGGATTCCTCCCGCGCAAAGCATGA 1180 Query 995 ACGCGATTCAAGAGGTTTTCAAGATTGCACGTGCGCAAACCCTAATCGCCTTGTGCAGCA 1054 |||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||| Sbjct 1181 ACGCAATTCAAGAGGTTTTCAAGATTGCCCGTGCGCAAACGCTAATCGCCTTGTGTAGCA 1240 Query 1055 CGGTACCCGGTTACTGGTTCACAGTGGCCTTCATCGACGTCATAGGTAGATTTGCGATAC 1114 ||||||| ||||||||||||||||| || |||||||||||||| || ||||||||||| | Sbjct 1241 CGGTACCTGGTTACTGGTTCACAGTTGCGTTCATCGACGTCATTGGAAGATTTGCGATTC 1300 Query 1115 AGATGATGGGTTTCTTCTTCATGACCGTCTTTATGTTCGCTCTCGCCATTCCTTACGACC 1174 |||||||||||||||| |||||||| ||||||||||| ||||| || ||||||||| ||| Sbjct 1301 AGATGATGGGTTTCTTTTTCATGACGGTCTTTATGTTTGCTCTGGCTATTCCTTACAACC 1360 Query 1175 ATTGGACTCACAAGGAGAACAGAATCGGATTCGTGG-CTATGTACTC-TCTAACATTCTT 1232 | |||||||||||||||||| |||||||||| || | |||||||| | |||||||||| Sbjct 1361 ACTGGACTCACAAGGAGAACCGAATCGGATTTGTTATC-ATGTACTCGT-TAACATTCTT 1418 Query 1233 CTTCGCCAACTTTGGACCCAATGCTACTACCTTCGTTGTGCCGGCTGAGATTTTCCCGGC 1292 |||||||||||||||||||||||||| ||||||||||||||||| || || ||||| || Sbjct 1419 TTTCGCCAACTTTGGACCCAATGCTACAACCTTCGTTGTGCCGGCCGAAATCTTCCCAGC 1478 Query 1293 TAGGTTTAGATCAACCTGTCATGGAATTTCCGCGGCTTCTGGAAAGTTGGGAGCAATGGT 1352 ||||| ||||||||||| || || || || || || || ||||| || ||||||||||| Sbjct 1479 CAGGTTCAGATCAACCTGCCACGGTATCTCTGCAGCATCAGGAAAATTAGGAGCAATGGT 1538 Query 1353 TGGTGCGTTTGGGTTCTTGTACTTAGCACA-AAGTCCTGACAAG-ACCAAGACAGA-GCA 1409 ||||||||| |||||||||||||| || || || || |||||| || ||||| || ||| Sbjct 1539 TGGTGCGTTCGGGTTCTTGTACTTGGCTCAGAAC-CCAGACAAGGAC-AAGACCGACGCA 1596 Query 1410 TGGATATCCTCCAGGCATTGGAGTCAAGAACTCGCTCATTGTTTTGGGTGTGGTTAATCT 1469 ||||| |||||||| ||||| |||| ||||||||| ||||| |||||||| ||||| || Sbjct 1597 -GGATACCCTCCAGGGATTGGGGTCAGGAACTCGCTTATTGTGTTGGGTGTAGTTAA-CT 1654 Query 1470 T-TTGGGGATGGTTTTTACACTGTTGGTTCCTGAATCTAAAGGCAAGTCTCTCGAGGAAA 1528 | || || || | || || | ||||| |||||||||||||| ||||| |||||||||| Sbjct 1655 TCTTAGGTATCCTCTTCACTTTCTTGGTACCTGAATCTAAAGGTAAGTCACTCGAGGAAA 1714 Query 1529 TGTCCGGTGAGAACGAACAAAATGATGAA-AGCA 1561 |||||||||| || ||| | ||||| ||| |||| Sbjct 1715 TGTCCGGTGAAAATGAAGACAATGA-GAATAGCA 1747 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 79417262190 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5