BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg485925
Length=3052
Score E
Sequences producing significant alignments: (Bits) Value
AT3G55060.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 4734 0.0
AT2G39300.1 | Symbols: | unknown protein; INVOLVED IN: biologi... 702 0.0
> AT3G55060.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT2G39300.2);
Has 61765 Blast hits to 33720 proteins in 2065 species: Archae
- 846; Bacteria - 6964; Metazoa - 31967; Fungi - 5247;
Plants - 3104; Viruses - 205; Other Eukaryotes - 13432 (source:
NCBI BLink). | chr3:20402984-20407046 REVERSE LENGTH=3060
Length=3060
Score = 4734 bits (2563), Expect = 0.0
Identities = 2909/3073 (95%), Gaps = 36/3073 (1%)
Strand=Plus/Plus
Query 1 GACACTCTCACACTTCTTGTAC-TCTCCGTTTAGATCAAATCGACGTTATCTAACGCTGT 59
||||||||||||||||||| || ||||| ||||||||||||| |||||||||| ||||||
Sbjct 3 GACACTCTCACACTTCTTGCACTTCTCCCTTTAGATCAAATCCACGTTATCTAGCGCTGT 62
Query 60 TAATAAATCTGCGTTTCA-TTTCTCTGTTCTATCTCG--TTTCCGATTTGCAAAATCGCT 116
|| ||||||||||||||| ||||| | || || ||| ||| |||||||||||||||||
Sbjct 63 TATTAAATCTGCGTTTCAGTTTCT-T-CTCCAT-TCGAATTTTCGATTTGCAAAATCGCT 119
Query 117 GTTTTATGCTGCAGTTGTGGTAGCATCTTCTTTTGATTGGAGAAAACAATGAAAAAGCTC 176
|||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||
Sbjct 120 GTTTTATGCTGCAGTTGTTATAGCA-C--CTTTTGATTGGAGAAAACAATGAAAAAGCTC 176
Query 177 TTCTTTTTTAGATCTTCTGGTAATGGAACTGATAAACAGGTTCACTGCGAAAAAGCAGCG 236
|||||||| ||||||||||||||||||| ||||||||| ||| |||||||||||| ||||
Sbjct 177 TTCTTTTTCAGATCTTCTGGTAATGGAAATGATAAACAAGTTAACTGCGAAAAAGAAGCG 236
Query 237 GATAGTAAGATGAAAACCCAAGCTAGTAGTCAGGCTGAACAAGAGTTCGATAGTCCTAAG 296
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 237 GATAGTAAGATGAGAACCCAAGCTAGTAGTCAGGCTGAACAAGAGTTCGATAGTCCTAAG 296
Query 297 TCACAGGGTCACGTTTCTGGTGGTCCAGCTCTTAGACGAAGCCTTTCATGGTCCTCGGCA 356
||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct 297 TCACATGGTCAAGTTTCTGGTGGTCTAGCTCTTAGACGAAGCCTTTCATGGTCCTCTGCA 356
Query 357 GGTTTCCTTTTTGATAAGTTTGGAGAAACTTCCAAGAATGAACT---AACTAGTGCTACT 413
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 357 GGTTTCCTTTTTGACAAGTTTGGAGAAACTTCCAAGAATGAACTAACAACTAGTGCTACT 416
Query 414 AAAAGCCAGGATAGGCGGCGCAATCATTCATCTCGATGCTTCACTCCAGAAAGACAAGTT 473
|||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 417 AAAAGCAAGGATAGGCGGCGCAATCATTCATCTCGATGCTTTACTCCAGAAAGACAAGTT 476
Query 474 AGAGAAAGGCAGTGTGAAGCAGACAAGTTTCAACATGATTCATCCGGGAGTTCATCATCT 533
||||||||||||||| |||||||||||||||| |||||||| || |||||||||||||||
Sbjct 477 AGAGAAAGGCAGTGTAAAGCAGACAAGTTTCAGCATGATTCGTCTGGGAGTTCATCATCT 536
Query 534 TGTTCTAGTAATGTCTCTAGTAAAGTTCTGGACCGTTATATTGATGGAGAAGAGCATTTG 593
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 537 TGTTCGAGTAATGTCTCTAGTAAAGTTCTGGACCGTTATATTGATGGAGAAGAGCATTTG 596
Query 594 GAACCGTGCAAGCAAAAGAGTAATTCTTCACACAGTGGTGTTTCTGGGAGTATAAACCGA 653
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct 597 GAACCGTGCAAGCAAAAGAGTAATTCTTCACACAGTGGTGTTTCTGAGAGTATAAATCGA 656
Query 654 AGGAGGCTTCCACCCCGGGTTCAGTGGACAGTCCCGACATCACCATCAGACACCTCCAAT 713
||||||||||||||||| ||||| ||||||||||| ||||||||||||||||| | | ||
Sbjct 657 AGGAGGCTTCCACCCCGAGTTCAATGGACAGTCCCTACATCACCATCAGACACTTTCGAT 716
Query 714 GAGAAACGAAAGTCCCAGTCATTTAGAGAAGCTAAAGGCACCCGTTTACGTTTCTCTTCT 773
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 717 GAGAAACGAAAGTCCCAGTCATTTAGAGAAGCTAAAGGCACCCATTTACGTTACTCTTCT 776
Query 774 GCTGATTGTGTGGAAAATGGGTTGAGGCATGGATCGCCTCGTTCGCTTGCAAGAAATGTC 833
|||||||||||||| ||||||||| |||||||||||||||||||| |||| |||||||||
Sbjct 777 GCTGATTGTGTGGATAATGGGTTGCGGCATGGATCGCCTCGTTCGGTTGCTAGAAATGTC 836
Query 834 ATTGAAAGACTCTCTCAGACTCATGGCAAGTCAAAGGGTTCAAACCACGAACCCATCACA 893
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 837 ATTGAAAGACTCTCTCAGACTCATGGCAAGTCAAAGGGTTCAAACCACGAACCAATCACA 896
Query 894 ATTCAAGATGTCTATGGTGGATCCCTTAATAGAACTTTTGACTCGAGCTCAGACATTC-C 952
||||||||||||||||||||||||||||| ||||||||||||||||||||||| | || |
Sbjct 897 ATTCAAGATGTCTATGGTGGATCCCTTAACAGAACTTTTGACTCGAGCTCAGATA-TCGC 955
Query 953 CGCTAATGTTTCACTAGCTGAACACTATGAACCTGTGAACGAGTATTATGCGCAGGACTA 1012
|||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||
Sbjct 956 CGCTAATGTTTCACTAGCTGAACATTATGAACCTGTTAACGAGTATTATACGCAGGACTA 1015
Query 1013 TGGAGGGAACCAGCAAAATTGTATACGTG-GTAAGAACGTGTATAAGTGTATGGAAGACG 1071
||||||| ||||||||||||||||||| | ||| ||||||||| ||||||||||||||||
Sbjct 1016 TGGAGGGCACCAGCAAAATTGTATACG-GAGTAGGAACGTGTACAAGTGTATGGAAGACG 1074
Query 1072 ATATTGACTCCGAGCTAGAAATGAAAATTAAAGACGCTGAGAAGAGAGCAAAATTGTTTT 1131
|| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 1075 ATCTTGACTCCGAGCTAGAAATGAAAATTAAAGAAGCTGAGAAGAGAGCTAAATTGTTTT 1134
Query 1132 CTGCAGAATTGGAGCAGCAGAGATGCCTTTCAGACTGTGACTTCGATGTTTCATCTTTGG 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1135 CTGCAGAATTGGAGCAGCAGAGATGCCTTTCAGACTGTGACTTCGATGTTTCATCTTTGG 1194
Query 1192 TCGGGGCAATTAGAAAACTGGAAGATGAGAGGCTCCACTTGGCATTTGAGAATGTAAATC 1251
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1195 TTGGGGCAATTAGAAAACTGGAAGATGAGAGGCTCCACTTGGCATTTGAGAATGTAAATC 1254
Query 1252 TCTTACGGTCCCAAATGGTTGAGAGGGCTTCTGCCAGGGAAGAAATCAGATGGTTGAAGT 1311
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1255 TCTTACGGTCCCAAATAGTTGAGAGGGCTTCTGCTAGGGAAGAAATCAGATGGTTGAAGT 1314
Query 1312 CAGATTGGGACTTGCATATACAGAGACTAGAAAAGGAGAAGAGCGAGTTGCAGGCTGGAT 1371
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1315 CAGATTGGGACTTGCATATACAGAGACTAGAAAAGGAGAAGAGCGAGCTGCAGGCTGGAT 1374
Query 1372 TGGAGAAAGAGCTTGATAGAAGATCAGGTGAGTGGACGTCGAAGCTCGAAAAATTCCAGC 1431
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 1375 TGGAGAAAGAGCTTGATAGAAGATCAGGTGAGTGGACGTCAAAACTCGAAAAATTCCAGC 1434
Query 1432 TTGAAGAGAAGAAACTCCGAGAGCGTGTCAGAGAGCTTGCTGAGCATAATGTCTCACTCC 1491
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1435 TTGAAGAGAAGAAGCTCCGAGAGCGTGTAAGAGAGCTTGCTGAGCATAATGTCTCACTCC 1494
Query 1492 AGAGGGAACTATCGGCTTTTCATGAGAATGAGACAGAGAACAAAGACATGATAACACATT 1551
|||| |||||||| ||||| || || ||||||||||||||||||||||||||||||||||
Sbjct 1495 AGAGAGAACTATCTGCTTTCCACGAAAATGAGACAGAGAACAAAGACATGATAACACATT 1554
Query 1552 TGGAGGGAAGAGTTGCTGAGCTGACCGCGACAGCAGATGAATTGCATGAAGAGAACACTT 1611
||||| |||||||||||||||||||| | ||||||||| |||||||||||||||||| ||
Sbjct 1555 TGGAGAGAAGAGTTGCTGAGCTGACCACAACAGCAGATAAATTGCATGAAGAGAACAATT 1614
Query 1612 ATGTTAAACAAACTCTCTCCCAGTTACAAGAGAGTTATGAAGGTGCTACAGAAGATCTTG 1671
|||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||
Sbjct 1615 ATGTTAAACAAACTCTCTCCAAGTTACAAGAGAGTTACGCAGGTGCTACAGAAGATCTTG 1674
Query 1672 ATTTCCTAAGAAGAAACTTTGAAGAGAAGGATCAAGAATGCAGGGAGTTGCACAAATCTG 1731
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1675 ATTTCTTGAGAAGAAACTTTGAAGAGAAGGATCAAGAATGCAGGGAGTTGCACAAATCTG 1734
Query 1732 TTACAAAGTTTCTCAGAACTTGCAAAGAACAAGGGAAGACAATCGAGGGACTTCGAGATG 1791
||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1735 TTACAAAGTTTTTCAGAACTTGCAAAGAACAAGGGAAGACAATTGAGGGACTTCGAGATG 1794
Query 1792 GTGTTTCCGAGGAGGGTAAGAAGCAACCGTCAGAGAAATTAGACCAGTTGGTCAAGAAAT 1851
||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1795 GTGTTTCTGAGGAGGTTAAGAAGCAACCGTCAGAGAAATTAGACCAGTTGGTCAAGAAAT 1854
Query 1852 TGCAGGTCGAGCAGATAAGGTTGACAGGGATCGAGCTTTCACTTAGAAGGGAAGTAGAAT 1911
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1855 TGCAGGTCGAGCAGGTAAGGTTGACAGGGATCGAGCTTTCACTTAGAAGGGAAGTAGAAT 1914
Query 1912 CAATGAAGCTTGAAACTGACTCTCTTCGCCATGAGAATATCTGTCTACTGAATCGATTGA 1971
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1915 CAATGAAGCTTGAAACTGACTCTCTTCGCCATGAAAATATCTGTCTACTGAATCGATTGA 1974
Query 1972 AGGGGAATGGTCAAGAAATAGACATTACGACCCTTAAGCTAGAGAGTGAGTTGAAGATGC 2031
| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct 1975 AAGGGAATGGTCAAGAAATAGACATTACAACCCTTAAGCTAGAGAATGAGTTGAAGATGC 2034
Query 2032 GTGTCTGCTACTTGCAAGACCAAGGACTGTCAATGTTAAATGAGAGCAGCCAGCTGTGTT 2091
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 2035 GTGTCTGCTACTTGCAAGAACAGGGACTGTCAATGTTAAATGAGAGCAGCCAGCTGTGTT 2094
Query 2092 ACAAGTTACTGAAGTTCATCAAAGGGAAATTAACTCAGCTTCCTGAAACCTATCAGGATA 2151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2095 ACAAGTTACTGAAGTTCATCAAAGGGAAATTAACTCAGCTTCCTGAAACCTATCAGGATA 2154
Query 2152 AGAATTCAGTGAAGGACGGATTAAGTGAGCAGTTTATGATTGAGTCTGAAATGAAAGTCC 2211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2155 AGAATTCAGTGAAGGACGGATTAAGTGAGCAGTTTATGATTGAGTCTGAAATGAAAGTCC 2214
Query 2212 ATGGAATAAGGCGCGGAACTGAAATCCTGAAGAGGAGTTTGCAAACGGTGACCAGTGTGG 2271
|||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2215 ATGGGATAAGGCGCGGAACTGAAAACCTGAAGAGGAGTTTGCAAACGGTGACCAGTGTGG 2274
Query 2272 TAGCTTCGAATTCAGAATCGTCTTCCTCAAGTACTGGTAGGCCTAGGAAACAAAGAGACC 2331
|||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||
Sbjct 2275 TAGCTTCGAATTCAGAATCGTCTTCCTCAAATACTGGTAGGCCTAGGGAACAAAGAAACC 2334
Query 2332 AATCAGTTGAAGAAACCCTGCGAGCGGAACTGAGTGCTGAGACCCTAATCACAAGTTTAT 2391
||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||
Sbjct 2335 AATCAGTTGAAGAAAACTTGCGAGCAGAACTGAGTGCTGAGACCCTAATCACAAGTTTAG 2394
Query 2392 TGCGGGAGAAACTGTATTCAAAGGAACAGGAAATTGAACAGCTCCAAGCAGAAGTAGCAG 2451
||||||||||||||||||| |||||| ||||||| |||||||||||||||||| ||||||
Sbjct 2395 TGCGGGAGAAACTGTATTCCAAGGAAAAGGAAATCGAACAGCTCCAAGCAGAACTAGCAG 2454
Query 2452 CAGCAGTACGAGGTAATGAGATTCTGAGAAGTGAGGTCCAAAGCAGTTTAGACAACCTAT 2511
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2455 CAGCAGTACGAGGTAATGAGATTCTGAGATGTGAGGTCCAAAGCAGTTTAGACAACCTAT 2514
Query 2512 CTGTTACGACCCACGAATTAAAAGACTTCAAGCATCAGATGTTGAAGAAGGAGGAAAGCA 2571
| ||||| ||||||||| | |||||| |||||||||||||||||||||||||||||||||
Sbjct 2515 CAGTTACAACCCACGAACTGAAAGACCTCAAGCATCAGATGTTGAAGAAGGAGGAAAGCA 2574
Query 2572 TAA-ACCGGCTCGAAAGCAATCTCCAGGAAGCGGCGAAAGAAATGGCGAGGCTGAACGCG 2630
||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2575 TAAGAC-GGCTCGAAAGCAATCTCCAGGAAGCGGCGAAAGAAATGGCGAGGCTGAACGCA 2633
Query 2631 CTATTGTCAAAAGTGTCTAGTGAGAGAGACGAGATATGGAGAGATT-TGAAACAATGCTG 2689
||||||||||||||||||| ||| |||| | |||||||||| || | | ||||||| | |
Sbjct 2634 CTATTGTCAAAAGTGTCTAATGAAAGAGGCCAGATATGGAGTGAGTAT-AAACAATACGG 2692
Query 2690 TGAGAAAAACATGCTTTTGAACTCAGAGAACCAGACATTGAAAGGGATGGTAGATAAATT 2749
||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||
Sbjct 2693 TGAGAAAAACATGCTTTTGAACTCAGAGAACGAGACATTGAAAGGAATGGTAGAGAAATT 2752
Query 2750 GGAGGAGAAGGTATTAGAGAAAGAAGGAGAGATCACAATACTACAAGATACAATCGGAAG 2809
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2753 GGAGGAGAAGGTATTAGAGAAAGAAGGAGAGATCACAATACTACAAGACACAATCGGAAG 2812
Query 2810 CAAGCATCTGAATCTCCTCTCAAGTCCTGATTTCTTGGTATAAGGGTCTTTCTTTATCAT 2869
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2813 CAAGCATCTGAATCTCCTCTCAAGTCCTGATTTCTTGGTATAAGGGTTTTTCTTTATCAT 2872
Query 2870 TCTTTCTTAGATGATATGTCAATTCTTTGGGGATTATAGAGATATGAtt-ttatcttctt 2928
| ||||||||| ||| |||| |||||||||| ||||||| ||||||| || |||||||
Sbjct 2873 TGTTTCTTAGACGATGGGTCA-TTCTTTGGGGCTTATAGA--TATGATTGTT-TCTTCTT 2928
Query 2929 ttattttt-ctttt-t-cttttGGATTGCTTATCTCAAAGCTGGATTCTCT--AGTTTCA 2983
|||||||| ||||| | |||||||||||||||||||||||||||||||||| |||||||
Sbjct 2929 TTATTTTTACTTTTCTTCTTTTGGATTGCTTATCTCAAAGCTGGATTCTCTCTAGTTTCA 2988
Query 2984 GATTTGTACTTACAAA-GGGCTTATAAACTT-G-GGTGAAATTTATGAG-AAAGAAAGTT 3039
|||||||||||| ||| |||||||||||||| | |||||| |||||| | ||||||||||
Sbjct 2989 GATTTGTACTTAAAAATGGGCTTATAAACTTAGTGGTGAAGTTTATG-GTAAAGAAAGTT 3047
Query 3040 TGTCATTTGACTC 3052
|||||||||||||
Sbjct 3048 TGTCATTTGACTC 3060
> AT2G39300.1 | Symbols: | unknown protein; INVOLVED IN: biological_process
unknown; LOCATED IN: vacuole; EXPRESSED IN: 8
plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation
and expansion stage; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G55060.1); Has 46416
Blast hits to 28308 proteins in 1743 species: Archae - 734;
Bacteria - 4822; Metazoa - 24446; Fungi - 3539; Plants - 2267;
Viruses - 163; Other Eukaryotes - 10445 (source: NCBI BLink).
| chr2:16410109-16413484 REVERSE LENGTH=2570
Length=2570
Score = 702 bits (380), Expect = 0.0
Identities = 865/1092 (79%), Gaps = 62/1092 (6%)
Strand=Plus/Plus
Query 1058 GTGTATGGAAGACGATATTGA-CTCCGAGCTAGAAATGAAAAT-TAAAGACGCTGAGAAG 1115
||||| |||||||||| || | || ||||| |||| | | || |||||| |||||||||
Sbjct 797 GTGTAAGGAAGACGATGTT-AGTTCAGAGCTGGAAAAG-AGATATAAAGAAGCTGAGAAG 854
Query 1116 AGAGCAAAATTGTTTTCTGCAGAATTGGAGCAGCAG-AGATGCCTTTCAGACTGTGACTT 1174
|||| || ||| |||||| |||| ||||| || || || | |||||||| ||||| ||
Sbjct 855 AGAGTGAAGTTGCTTTCTGAAGAAATGGAGGAGAAGAAG-TTTCTTTCAGATTGTGATTT 913
Query 1175 CGATGTTTCATCTTTGGTCGGGGCA-ATTAGA-AAACTGGAAGATGAGAGGCTCCACTTG 1232
|||| ||||||||||||| || | | |||||| ||| ||||||| |||||| | |||
Sbjct 914 CGATATTTCATCTTTGGTTGGAG-ATATTAGACAAA-TGGAAGAAGAGAGGGTAGGCTTA 971
Query 1233 GCATTTGAGAATGTAAATCTCTTACGGTCCCAAATGGTTGAGAGGGCTTCTGCCAGGGAA 1292
|| |||||| | ||| ||| |||||||| ||||||| ||||||||||||| | ||||||
Sbjct 972 GCTTTTGAGGTTTTAAGTCTTTTACGGTCACAAATGGATGAGAGGGCTTCTACTAGGGAA 1031
Query 1293 GAAATCAGATGGTTGAAGTCA-GATTGGGACTTGCATATACAGAGACTAGAAAAGGAGAA 1351
|| |||||| || | ||| | ||||||||||||| | || || |||||||||| |||||
Sbjct 1032 GATATCAGACGGGTAAAG-AATGATTGGGACTTGCTTTTAAAGCGACTAGAAAAAGAGAA 1090
Query 1352 GAGC-GAGTTGCAGGCTGGA-TTGGAGAAAGAGCTTGATAGAAGATCAGGTGAGTGGACG 1409
|| | ||||| || | | | || |||| ||||||||||||||| ||| ||||||||||
Sbjct 1091 GA-CTGAGTTACAAG-TTCAGTTAGAGACAGAGCTTGATAGAAGGTCAAGTGAGTGGACT 1148
Query 1410 TCGAAGCTCGAAAAATTCCAGCTTGAAGAGAAGAA-ACTCCGAGAGCGTGTCAGAGAGCT 1468
|||||| |||| | ||| || | || ||||| || || | || ||||||||||||||
Sbjct 1149 TCGAAGGTCGAGAGTTTCAAGGTGGAGGAGAA-AAGGCTGAGGGAACGTGTCAGAGAGCT 1207
Query 1469 TGCTGAGCATAATGTCTCACTCCAGAGGGAACTATCGGCTTTTCATGAGAATGAGACAGA 1528
||||||||||||||||||||||||||| ||| ||||| | |||||||| || || || ||
Sbjct 1208 TGCTGAGCATAATGTCTCACTCCAGAGAGAAATATCGACCTTTCATGAAAAGGAAACTGA 1267
Query 1529 GAACAAAGACATGATAACACATTTGGAGGGAAGAGTTGCTGAGCTGACCGCGACAGCAGA 1588
| | || ||||||| ||||||||| | || |||| | ||| ||| || ||||||||
Sbjct 1268 GCGTATCGATATGATAAGACATTTGGATGAAACAGTTACGGAGTTGAGTGCAACAGCAGA 1327
Query 1589 TGAATTGCATGAAGAGAACACTTATGT-TAAA-CAAACTCTCTCCCAGTTACAAGAGAGT 1646
||| ||| |||||| || | || | | | | |||| ||||||| ||||||||||||||
Sbjct 1328 GGAAATGCGTGAAGA-AA-ATTTGTTTCTTATGCAAAATCTCTCCAAGTTACAAGAGAGT 1385
Query 1647 TATGAA-GGT-GCTACAGAAGATCTTGATTTCCTAAGAAGAAACTTTGAAGAGAAGGATC 1704
|| | ||| | ||| || |||||||||| | |||||||||||||||||||||| || |
Sbjct 1386 TAC-ACTGGTAG-TACCGATGATCTTGATTACGTAAGAAGAAACTTTGAAGAGAAAGA-C 1442
Query 1705 AAG-AATGCAGGGAGTTGCACAAATCTGTTACAA-AGTTTCTCAGAACTTGCAAAGAACA 1762
| | |||||| |||||| || ||||||||||||| | || || |||||||||||||||||
Sbjct 1443 ATGGAATGCAAGGAGTTACATAAATCTGTTACAAGACTT-CTAAGAACTTGCAAAGAACA 1501
Query 1763 AGGGAAGACAATCGAGGGACTTCGAGATGGTGTT-TCCGAGGAGGGTAAGAAGCAACCGT 1821
|| |||||||||| |||||||| |||||||| || |||||||| |||||||||||| |
Sbjct 1502 AGAGAAGACAATCCAGGGACTTAGAGATGGT-TTCTCCGAGGAAATTAAGAAGCAACCTT 1560
Query 1822 CAGAGAAATTAGACCAGTTGGTCAAGAAA-TTGCAGGTCGAGCAGA-TAAGGTTGACAGG 1879
||||| | | | | || |||||| || || | || || | |||||||| |||
Sbjct 1561 CAGAGCA-T--G-----T-GGACAAGAAGCTT-CAAATGGAACA-ACTAAGGTTGGTAGG 1609
Query 1880 -GATCGAGCTT-TCACTTAGAAGGGAAGTAGAATCAATGAAGCTTGAAACTGACTCTCTT 1937
| | || || ||||| |||| ||| ||||||||||||||||| ||| |||| ||||||
Sbjct 1610 AGTT-GAA-TTGTCACTGAGAAAGGAGGTAGAATCAATGAAGCTCGAAGCTGAATCTCTT 1667
Query 1938 CGCCATGAGAATATCTGTCTACTGAATCGAT-TGAAGGGGAATGGTCAAGAAA-TAGACA 1995
|| | |||||||| |||||| |||||||| | | || || ||||| ||||| | ||||
Sbjct 1668 CGTCGTGAGAATAACTGTCTGCTGAATCG-TGTAAAAGGAAATGGAGAAGAAGCT-GACA 1725
Query 1996 TTACGAC--CCTT-AAGCTAGAGAGTGAGTTGAAGATGCGTGTCTG-CTACTTGCAAGAC 2051
||| ||| |||| |||||||| | ||| ||||||||||||| || | |||||||||||
Sbjct 1726 TTATGACGACCTTCAAGCTAGATAATGAAATGAAGATGCGTGTATGTC-ACTTGCAAGAC 1784
Query 2052 CAAGG-ACTGTCAATGTTAAATGAGAGCAGC-CAGCTGTGTTACAAGTTACTGAAGTTCA 2109
||||| | | ||||||||||||||||| | | ||||| ||||||||||| ||||| |||
Sbjct 1785 CAAGGTA-TATCAATGTTAAATGAGAGTA-CTCAGCTATGTTACAAGTTTCTGAAAATCA 1842
Query 2110 TCAAAGGGAAAT 2121
|||||| |||||
Sbjct 1843 TCAAAGAGAAAT 1854
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 151755002575
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5