BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg485932
Length=2493
Score E
Sequences producing significant alignments: (Bits) Value
AT3G55110.1 | Symbols: | ABC-2 type transporter family protein... 3740 0.0
AT3G55130.1 | Symbols: ATWBC19, WBC19 | white-brown complex hom... 1775 0.0
AT5G13580.1 | Symbols: | ABC-2 type transporter family protein... 409 8e-113
> AT3G55110.1 | Symbols: | ABC-2 type transporter family protein
| chr3:20424550-20427377 REVERSE LENGTH=2533
Length=2533
Score = 3740 bits (2025), Expect = 0.0
Identities = 2332/2480 (94%), Gaps = 21/2480 (1%)
Strand=Plus/Plus
Query 28 TGGCTCCTGAAAGAAGATAACTGAAATTTTAACAAGTAAGGGTT-T-CCAC-ATG-TACT 83
||||| || ||||||||||||| ||| |||||| |||| || | | || ||| ||||
Sbjct 55 TGGCTTCTAAAAGAAGATAACTAAAAATTTAAC----AAGGTTTATACTACTATGATACT 110
Query 84 ACACTG-T-----TTAGCTTCATCTTCAAGAATACACCGTTAAACTGCCGTCAACCAAAA 137
|||||| | |||||||||||||| || || |||||||||| || ||||||||||
Sbjct 111 ACACTGTTAGCAGTTAGCTTCATCTTC-AG-CCACGCCGTTAAACTTCCATCAACCAAAA 168
Query 138 AGAGTTAACTTAATCGTTAAAGATGCCACGTGTTTCGGCGGAAATTTTAGATCTCTCTCT 197
| |||||||| ||||||| ||||||||||||||||||||||||||||||||| | ||||
Sbjct 169 ATAGTTAACTAAATCGTTGAAGATGCCACGTGTTTCGGCGGAAATTTTAGATATTTCTCA 228
Query 198 CACCGGCGGCAACCAATCACCGACGCTTGCCGAACTGCTGAAAGATTTCAACGACAGTGG 257
||||||||||||| | ||||||||||||| |||||| |||||||||||||||||||||||
Sbjct 229 CACCGGCGGCAACGAGTCACCGACGCTTGGCGAACTCCTGAAAGATTTCAACGACAGTGG 288
Query 258 CCGGAAAAAATATCCCGGCGAAAATGCTCCGACTCATCACATCTTGGATCTCGCTCCCGC 317
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 289 CCGGAAAAAATATCCCGGCGAAAATGCTCCGACTCAACACATATTGGATCTCGCTCCCGC 348
Query 318 GGCTGAAACACGATCTGTGCCGTTTCTCTTATCCTTCAACAATCTCAGTTACAATGTCGT 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 349 GGCTGAAACACGATCTGTGCCGTTTCTCTTATCCTTCAACAATCTCAGTTACAATGTTGT 408
Query 378 ACTTCGCCGGTGGTTTGATTTCTCCCGACGAAAGACCGCTTCCGTGAAGACTTTACTCGA 437
|||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 409 ACTTCGCCGGCGGTTTGATTTCTCCCGGCGAAAGACCGCTTCGGTGAAGACTTTACTCGA 468
Query 438 TGATATTACAGGTGAGGCTTGTGACGGAGAAATCCTCGCCGTTCTGGGTGGAAGCGGAGC 497
|||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct 469 TGATATTACAGGCGAGGCTCGTGACGGAGAAATCCTCGCCGTTCTTGGTGGAAGCGGAGC 528
Query 498 TGGAAAATCCACTTTGATAGACGCATTAGCCGGAAGAGTGGCGGAGGATAGCCTGAGAGG 557
||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct 529 CGGAAAATCCACGTTGATAGACGCATTAGCCGGAAGAGTGGCGGAGGATAGCTTGAAAGG 588
Query 558 CACGGTAACTCTAAACGGAGAGAAAGTTTTGCAATCTCGATTGTTGAAAGTGATCTCGGC 617
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 589 CACGGTAACTCTAAACGGAGAAAAAGTTTTGCAATCTCGATTGTTGAAAGTGATATCGGC 648
Query 618 GTATGTGATGCAAGACGATCTTCTTTTTCCGATGCTCACCGTCAAAGAAACCCTAATGTT 677
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 649 GTATGTGATGCAAGACGATCTTCTTTTTCCGATGCTCACCGTTAAAGAAACCCTAATGTT 708
Query 678 CGCTTCCGAGTTTCGTCTCCCGAGAAGTTTGCCTAAATCGAAGAAGATGGAGCGTGTTGA 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 709 CGCTTCCGAGTTTCGTCTCCCGAGAAGTTTGCCTAAATCGAAGAAGATGGAGCGTGTTGA 768
Query 738 AACCCTAATTGATCAATTAGGGCTTAGAAACGCGGCGGATACGGTAATCGGAGATGAAGG 797
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 769 AACCCTAATTGACCAACTAGGGCTTAGAAACGCGGCGGATACGGTAATCGGAGATGAAGG 828
Query 798 ACACCGTGGAGTCTCTGGCGGAGAGCGACGGCGCGTGTCAATCGGGATTGATATCATCCA 857
||| |||||||| |||||||||||||||||||||||||||||||| |||||||| || ||
Sbjct 829 ACATCGTGGAGTATCTGGCGGAGAGCGACGGCGCGTGTCAATCGGAATTGATATTATACA 888
Query 858 CGATCCTATCCTCCTCTTCCTCGACGAACCAACGTCGGGGTTAGACTCCACCAATGCGTT 917
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 889 CGATCCTATCCTCCTCTTCCTCGACGAACCAACGTCAGGGTTAGACTCCACCAATGCGTT 948
Query 918 TATGGTGGTGCAGGTTTTGAAACGAATTGCGCAGAGTGGCAGTATTGTAATTATGTCGAT 977
|||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||
Sbjct 949 TATGGTGGTGCAGGTTTTGAAACGAATTGCTCAGAGTGGCAGTGTCGTAATTATGTCGAT 1008
Query 978 TCATCAACCTAGTGCTCGTATCATTGATTTGCTTGATCGGCTTATTATCTTATCTCACGG 1037
|||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||
Sbjct 1009 CCATCAACCTAGTGCACGTATCATTGGTTTGCTTGATCGGCTTATCATCTTATCTCACGG 1068
Query 1038 GAAGAGTGTGTTCAATGGATCACCGGCTAGTCTTCCTTCGTTCTTCTCCAACTTTGGTCG 1097
||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||| ||
Sbjct 1069 GAAGAGTGTGTTCAATGGATCTCCGGTTAGTCTTCCTTCGTTCTTCTCCAGCTTTGGCCG 1128
Query 1098 TCCCATTCCGGAGAAAGAGAACATCACAGAGTTCGCACTTGATGTAATTCGAGAACTTGA 1157
||||||||| |||||||| |||||||||||||||||||||||||| |||||||| |||||
Sbjct 1129 TCCCATTCCAGAGAAAGAAAACATCACAGAGTTCGCACTTGATGTCATTCGAGAGCTTGA 1188
Query 1158 AGGATCCTCTGAAGGAACAAGAGGTTTAGTAGAGTTCAACGAAAAGTGGCAACAGAACCA 1217
|||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||
Sbjct 1189 AGGATCCTCTGAAGGAACCAGAGATTTAGTAGAATTCAACGAAAAGTGGCAACAGAACCA 1248
Query 1218 ATCTGCTCGAGCCACAACACAAAGTGGCGTATCTCTTAAAGAAGCCATCACTGCAAGTGT 1277
| ||||| ||||||||||||||||| |||||||||| |||||||||||| ||||||||||
Sbjct 1249 AACTGCTAGAGCCACAACACAAAGTCGCGTATCTCTAAAAGAAGCCATCGCTGCAAGTGT 1308
Query 1278 TTCTAGAGGGAAACTAGTCTCAGGCTCATCTGGAGCCAATCCTGTTTCAATGGAAACAGT 1337
||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||
Sbjct 1309 TTCTAGAGGGAAACTAGTCTCTGGCTCATCTGGAGCCAATCCTATATCAATGGAAACAGT 1368
Query 1338 ATCTTCATACGCAAACCCGCCATTGGCGGAAACATTTATCTTAGCCAAACGGTACATAAG 1397
||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 1369 ATCTTCATACGCAAACCCGCCATTGGCGGAAACGTTTATCTTAGCTAAACGGTACATAAA 1428
Query 1398 AAACTGGATCCGCACGCCGGAGCTTATAGGAATGCGGATCGCTACTGTCATGGTGACCGG 1457
|||||||||||||||||| ||||| |||||||||||||| | ||||||||||||||| ||
Sbjct 1429 AAACTGGATCCGCACGCCTGAGCTCATAGGAATGCGGATTGGTACTGTCATGGTGACTGG 1488
Query 1458 TCTTCTCTTAGCCACTATATATTGGAGGCTTGACAACACTCCAAGAGGTGCACAAGAGAG 1517
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1489 TCTTCTCTTAGCTACTGTATATTGGAGGCTTGACAACACTCCAAGAGGTGCACAAGAGAG 1548
Query 1518 AATGGGCTTCTTCGCGTTCGGTATGTCCACCATGTTCTACTGTTGTGCGGACAACATCCC 1577
|||||||||||| ||||||||||||||||| |||||||| |||||||| |||||||||||
Sbjct 1549 AATGGGCTTCTTTGCGTTCGGTATGTCCACAATGTTCTATTGTTGTGCAGACAACATCCC 1608
Query 1578 TGTTTTTATCCAAGAACGATACATTTTCTTGAGAGAGACAACGCACAATGCATACAGAAC 1637
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1609 TGTTTTTATCCAAGAACGATACATTTTCTTGAGAGAGACAACGCACAACGCATACAGAAC 1668
Query 1638 ATCTTCATATGTCATATCTCACGCCCTTGTGTCCCTGCCTCAGCTACTTGCTCTCTCCAT 1697
|||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 1669 ATCTTCATATGTTATATCTCACGCTCTTGTGTCTCTGCCTCAGCTACTTGCTCTCTCCAT 1728
Query 1698 TGCATTTGCTGCAACGACATTTTGGACTGTTGGTTTGAGCGGCGGGTTAGAGAGTTTCTA 1757
||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1729 TGCATTTGCCGCAACTACATTTTGGACCGTTGGTTTGAGCGGCGGGTTAGAGAGTTTCTT 1788
Query 1758 CTACTACTGCCTCATAATCTACGCAGCCTTTTGGTCTGGTTCCTCCATTGTTACTTTCAT 1817
||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 1789 TTACTACTGCCTCATAATATACGCAGCCTTTTGGTCTGGATCCTCCATTGTTACTTTCAT 1848
Query 1818 ATCCGGTCTTA-TTCCGAATGTCATGATGAGTTACATGGCCACTATTGCCTATCTTTCCT 1876
|||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1849 TTCCGGT-TTAATTCCGAATGTCATGATGAGTTACATGGTCACTATTGCCTATCTTTCCT 1907
Query 1877 ATTGTTTACTGCTGGGTGGATTCTACATCAACCGGGATCGGATACCGTTGTACTGGATAT 1936
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1908 ATTGTCTACTGCTGGGTGGATTCTACATCAACCGGGATCGGATACCGTTGTACTGGATAT 1967
Query 1937 GGTTTCATTACATTTCGCTTCTCAAGTATCCCTACGAGGCTGTCCTAATCAATGAGTTTG 1996
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 1968 GGTTTCATTACATTTCGCTTCTGAAGTATCCCTACGAGGCTGTTCTAATCAATGAGTTTG 2027
Query 1997 ATGACCCGTCTCGTTGTTTTGTTAAGGGAGTCCAAGTATTTGATGGTACGCTTTTGGCGG 2056
|||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 2028 ATGACCCGTCACGTTGTTTTGTAAAGGGAGTTCAAGTATTTGATGGTACGCTTTTGGCGG 2087
Query 2057 AAGTCCCCCATATGATGAAGGTTAAGCTTCTCGATACACTGAGTAGCTCTTTAGGAACCA 2116
|||| ||||| |||||||||||||||| || |||||||||||| ||||||||||||| |
Sbjct 2088 AAGTGTCCCATGTGATGAAGGTTAAGCTCCTAGATACACTGAGTGGCTCTTTAGGAACGA 2147
Query 2117 AGATAACAGAGTCCACATGCTTGAGAACAGGGCCTGACTTACTTATGCAGCAAGGTATAA 2176
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2148 AGATAACAGAGTCCACATGCTTGAGAACAGGACCTGACTTACTTATGCAGCAAGGTATAA 2207
Query 2177 CTCAATTGAGCAAGTGGGACTGCTTGTGGATTACGTTAGCTTGGGGTCTCTTCTTTAGGA 2236
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct 2208 CTCAATTGAGCAAGTGGGATTGCTTATGGATTACGTTAGCTTGGGGTCTCTTCTTTAGGA 2267
Query 2237 TCTTGTTTTACTTTTCCTTGCTGTTCGGGAGTAAGAATAAGAGGACGTGAAGGTAGTCCA 2296
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2268 TCTTGTTTTACTTGTCCTTGCTGTTCGGGAGTAAGAATAAGAGGACGTGAAGGTAGTCTA 2327
Query 2297 CAAGCACAAAAACATACAACAAACGCATATAATATACGTTGTTGTAGTTTTGTAATCAAG 2356
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2328 CAAGCACAAAAACATACAACAAACGCATATAATATACGTTGTTGTAGTTTTCTAATCAAG 2387
Query 2357 TTGTAACATCTATAATTTTGTATCATCATGGGAATATTGTAAAAGGATTTTTTCTTAAAA 2416
||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2388 TTGTAACATTTTTAATTTTGTGTCATCATGGGAATATTGTAAAAGGATTTTTTCTTAAAA 2447
Query 2417 TCCATAGTATCATAAT--T-ACTCTAGTATACGATTAGATTTCAACATATGACTCAGTTG 2473
||| |||||||||||| | |||| |||| |||||||||||||||||||||| |||||||
Sbjct 2448 TCCTTAGTATCATAATAATTACTCGAGTACACGATTAGATTTCAACATATGATTCAGTTG 2507
Query 2474 AAGTTATTTAATGTAAATAT 2493
|||||| ||||| || ||||
Sbjct 2508 AAGTTACTTAATATATATAT 2527
> AT3G55130.1 | Symbols: ATWBC19, WBC19 | white-brown complex homolog
19 | chr3:20433878-20436390 REVERSE LENGTH=2513
Length=2513
Score = 1775 bits (961), Expect = 0.0
Identities = 1669/2001 (83%), Gaps = 88/2001 (4%)
Strand=Plus/Plus
Query 344 TCTTATCCTTCAACAATC-TCAGTTACAATGTCGTACTTCGCCGGTGGTTTGATTTCTCC 402
||||| ||| ||||||| ||| ||| ||||| |||||||||| |||||| |||||
Sbjct 317 TCTTAAACTTTAACAATCTTCA-ATACGATGTCACACTTCGCCGGCGGTTTGGCTTCTCA 375
Query 403 CGACGAAAGACCGCTTCCGTGAAGACTTTACTCGATGATATTACAGGTGAGGCTTGTGAC 462
|| | ||| | || || |||||| ||||||||||| || | || ||||||| ||||
Sbjct 376 CGGC-AAA-A-CG---GAGTAAAGACTCTACTCGATGATGTTTCCGGAGAGGCTTCTGAC 429
Query 463 GGAGAAATCCTCGCCGTTCTGGGTGGAAGCGGAGCTGGAAAATCCACTTTGATAGACGCA 522
|| || |||||||||||||| |||| ||| ||||| |||||||| || ||||| || |||
Sbjct 430 GGCGATATCCTCGCCGTTCTCGGTGCAAGTGGAGCAGGAAAATCAACGTTGATCGATGCA 489
Query 523 TTAGCCGGAAGAGTGGCGGA-GGATAGCCTGAGAGGCACGGTAACTCTAAACGGAGAGAA 581
|||| || ||||| || || ||| ||| |||||||| | ||||||||||||||||||||
Sbjct 490 CTAGCGGGGAGAGTTGCTGAGGGA-AGCTTGAGAGGCTCTGTAACTCTAAACGGAGAGAA 548
Query 582 AGTTTTGCAATCTCGATTGTTGAAAGTGATCTCGGCGTATGTGATGCAAGACGATCTTCT 641
||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||
Sbjct 549 AGTTTTGCAATCTCGATTGTTGAAAGTTATATCGGCGTATGTTATGCAAGACGATCTTCT 608
Query 642 TTTTCCGATGCTCACCGTCAAAGAAACCCTAATGTTCGCTTCCGAGTTTCGTCTCCCGAG 701
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 609 TTTTCCGATGCTCACCGTTAAAGAAACCCTAATGTTCGCTTCCGAGTTTCGTCTCCCGAG 668
Query 702 AAGTTTGCCTAAATCGAAGAAGATGGAGCGTGTTGAAACCCTAATTGATCAATTAGGGCT 761
||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 669 AAGTTTGTCTAAGTCGAAGAAGATGGAGCGTGTTGAAGCCCTAATTGATCAATTAGGG-T 727
Query 762 TA-GAAACGCGGCGGATACGGTAATCGGAGATGAAGGACACCGTGGAGTCTCTGGCGGAG 820
|| ||||||||||| | |||||||||||||| ||||||||||||||||| ||||| ||||
Sbjct 728 TAAGAAACGCGGCGAACACGGTAATCGGAGACGAAGGACACCGTGGAGTTTCTGGAGGAG 787
Query 821 AGCGACGGCGCGTGTCAATCGGGATTGATATCATCCACGATCCTATCCTCCTCTTCCTCG 880
|| |||||||||| |||||||| || ||||| || |||||||||||| || | |||||||
Sbjct 788 AGAGACGGCGCGTTTCAATCGGAATCGATATTATACACGATCCTATCGTCTTGTTCCTCG 847
Query 881 ACGAACCAACGTCGGGGTTAGACTCCACCAATGCGTTTATGGTGGTGCAGGTTTTGAAAC 940
||||||||||||||||| | || || || || ||||||||||||||||| ||||||||||
Sbjct 848 ACGAACCAACGTCGGGGCTGGATTCTACAAACGCGTTTATGGTGGTGCAAGTTTTGAAAC 907
Query 941 GAATTGCGCAGAGTGGCAGTATTGTAATTATGTCGATTCATCAACCTAGTGCTCGTATCA 1000
||||||| || ||||||||||| |||||||||||||| ||||||||||||||||| |||
Sbjct 908 GAATTGCTCAAAGTGGCAGTATCGTAATTATGTCGATCCATCAACCTAGTGCTCGAATCG 967
Query 1001 TTGATTTGCTTGATCGGCTTATTAT-CTTATCTCACGGGAAGAGTGTGTTCAATGGATCA 1059
| || ||||||||||||||||| || || ||||| || || |||||||||||||||||
Sbjct 968 TGGAGTTGCTTGATCGGCTTATCATTCT-ATCTCGTGGCAAAAGTGTGTTCAATGGATCT 1026
Query 1060 CCGGCTAGTCTTCCTTCG--TTCTTCTCCAACTTTGGTCGTCCCATTCCGGAGAAAGAGA 1117
||||| |||||||| || ||||||||| |||| |||||||| || |||||||||||||
Sbjct 1027 CCGGCGAGTCTTCC--CGGATTCTTCTCCGACTTCGGTCGTCCGATCCCGGAGAAAGAGA 1084
Query 1118 ACATCA-CAGAGTTCGCACTTGATGTAATTCGAGAACTTGAAGGATCCTCTGAAGGAAC- 1175
|||| | ||||||||||||||||| || ||||||| |||||||||||| |||||| ||
Sbjct 1085 ACAT-ATCAGAGTTCGCACTTGATTTAGTTCGAGAGCTTGAAGGATCCAATGAAGGTACG 1143
Query 1176 AAGAGGTTTAGTAGAGTTCAACGAAAAGTGGCAACAGAACCA-ATCTGC-T---CGA--- 1227
|| || ||||||||| |||||||||||||||||||| ||| | ||| || | | |
Sbjct 1144 AA-AGCTTTAGTAGACTTCAACGAAAAGTGGCAACAAAACAAGATCAGCCTGATCCAATC 1202
Query 1228 -GC-C-ACAACAC-AA-A-G-T-G-----G-C-GT--ATC-TCTT-AAA-GAAGCCATCA 1267
|| | |||| || || | | | | | | || || |||| ||| |||||||| |
Sbjct 1203 TGCTCCACAA-ACCAATAAGCTCGACCAAGACCGTTCATTATCTTTAAAAGAAGCCATTA 1261
Query 1268 CTGCAAGTGTTTCTAGAGGGAAACTAGTCTCAGGCTCATCTGGAGCCAATCCTGTTTCAA 1327
||| |||||||||||||| ||||||||||||||||||||| || ||||||| ||| |
Sbjct 1262 ATGCGAGTGTTTCTAGAGGCAAACTAGTCTCAGGCTCATCTAGATCCAATCCCACTTCCA 1321
Query 1328 TGGAAACAGTATCTTCATACGCAAACCCGCCATTGG-CGGAAACATTTATCTTAGCCAAA 1386
||||||||||||||||||||||||||||| | ||| || ||||||| ||||||||||||
Sbjct 1322 TGGAAACAGTATCTTCATACGCAAACCCGTCGTTGTTCG-AAACATTCATCTTAGCCAAA 1380
Query 1387 CGGTACAT-AAGAAACTGGATCCGCACGCCGGAGCTTA-TAGGAATGCGGATCGCTACTG 1444
|||||||| || |||||||||||| | ||| ||||| | |||||| |||| ||||| |
Sbjct 1381 CGGTACATGAA-AAACTGGATCCGGATGCCTGAGCT-AGTAGGAACAAGGATTGCTACGG 1438
Query 1445 TCATGGTGACCGGTCT-TCTCTTAGCCACTATATATTGGAGGCTTGACAACACTCCAAGA 1503
| |||||||| ||| | ||| ||||| ||| | ||||||| ||| ||| |||||||||||
Sbjct 1439 TAATGGTGACTGGT-TGTCTTTTAGCAACTGTGTATTGGAAGCTAGACCACACTCCAAGA 1497
Query 1504 GGTGCACAAGAGAGAATGGGCTTC-TTCGCGTTCGGTATGTCC-ACCA-TGTTCTACTGT 1560
|| |||||||||||| || ||| ||||| || | | |||| | || ||||||| |||
Sbjct 1498 GGAGCACAAGAGAGATTGA-CTTTGTTCGCATTTG-TC-GTCCCAACAATGTTCTATTGT 1554
Query 1561 TGTGCGGACAACATCCCTGTTTTTATCCAAGAACGATACATTTTCTTGAGAGAGACAACG 1620
||| ||||| |||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 1555 TGTTTAGACAATGTCCCCGTTTTTATCCAAGAACGATACATTTTCTTAAGAGAGACAACA 1614
Query 1621 CACAATGCATACAGAACATCTTCATATGTCATATCTCACGCCCTTGTGTCCCTGCCTCAG 1680
||||| || ||||||||||||||||| |||||||| ||| | ||||||||||||||||||
Sbjct 1615 CACAACGCGTACAGAACATCTTCATACGTCATATCACACTCTCTTGTGTCCCTGCCTCAG 1674
Query 1681 CTACTTGCTCTCT-CCATTGC-ATTTGCTGCAA-CGACATTTTGGACTGTTGGTTTGAGC 1737
|||||||| | || || ||| |||| | || | | ||||| ||||| ||||| ||||||
Sbjct 1675 CTACTTGCAC-CTTCC-TTGGTATTTTCCGCGATC-ACATTCTGGACCGTTGGATTGAGC 1731
Query 1738 GGCGGG-TTAGAGAGTTTC-TACTACTACTGCCTCATAATCTACGCAGCCTTTTGGTCTG 1795
|| ||| |||||| |||| | || ||| |||||| ||||||| || ||||||||||||
Sbjct 1732 GG-GGGATTAGAGGGTTTTGT-CTTCTATTGCCTCCTAATCTATGCCTCCTTTTGGTCTG 1789
Query 1796 GTTCCTCCATTGTTAC-TTTCATATCCGGTCTTATTCCGAATGTCATGATGA-GTTACAT 1853
| || ||| | ||||| ||| ||||||||| || |||||||| ||||| | | |||||||
Sbjct 1790 GATCTTCCGTCGTTACCTTT-ATATCCGGTGTTGTTCCGAATATCATGTT-ATGTTACAT 1847
Query 1854 GGCCACTATTGCCTATCTTTCCTATTGTTTACTGCTGGGTGGATTCTACATCAACCGGGA 1913
|| | | ||| ||||||| |||| ||||||||| || ||||||||||| ||||||| ||
Sbjct 1848 GGTCTCCATTACCTATCTCGCCTACTGTTTACTGTTGAGTGGATTCTACGTCAACCGAGA 1907
Query 1914 TCGGATACCGTTGTACTGGATATGGTTTCATTACATTTCGCTTCTCAAGTATCCCTACGA 1973
||| |||||||| || |||| ||||||||||||||||| ||||||||||||| || ||
Sbjct 1908 TCGAATACCGTTTTATTGGACGTGGTTTCATTACATTTCAATTCTCAAGTATCCGTATGA 1967
Query 1974 GGCTGTCCTAATCAATGAGTTTGATGACCCGTCTCGTTGTTTTGTTAAGGGAGTCCAAGT 2033
||||||| ||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||
Sbjct 1968 GGCTGTCTTAATCAACGAGTTTGATGACCCGTCTCGTTGTTTTGTTAGGGGTGTCCAGGT 2027
Query 2034 ATTT-GATGGTACGCTTTT-GGCGGAA-GTCCCCCATATGATGAAGGTTAAGCTTCTCGA 2090
||| || |||| ||| | || ||| ||| | | | |||||||||||| || ||
Sbjct 2028 -TTTCGACAGTACTCTTCTCGGGGGAGTGTCTGAC-TCCGG-GAAGGTTAAGCTCCTTGA 2084
Query 2091 TACACTGAGTAGCTCTTT-AGGAACCAAGATAACAGAGTCCACATGCTTGAGAACAGGGC 2149
|| || |||| ||| | || ||| |||||||| ||||||||||||||||| || |||
Sbjct 2085 AACTCTCAGTAAATCTCTGAG-AACGAAGATAACGGAGTCCACATGCTTGAGGACGGGGT 2143
Query 2150 CTGACTTACTTATGCAGCAAGGTATAACTCAATTGAGCAAGTGGGACTGCTTGTGGATTA 2209
||||||||||| || || ||||| || ||||||||||||||||| |||||||||||||
Sbjct 2144 CTGACTTACTTGCACAACAGGGTATTACGCAATTGAGCAAGTGGGATTGCTTGTGGATTA 2203
Query 2210 CGTTAGCTTGGGGTCTCTTCTTTAGGATCTTGTTTTACTTTTCCTTGCTGTTCGGGAGTA 2269
|||| |||| |||||||||||||||||||| |||||||| |||||||||| ||||| |
Sbjct 2204 CGTTTGCTTCAGGTCTCTTCTTTAGGATCTTATTTTACTTCGCCTTGCTGTTTGGGAGCA 2263
Query 2270 AGAATAAGAGGACGTGAAGGT 2290
|||||||||||||||| |||
Sbjct 2264 GGAATAAGAGGACGTGA-GGT 2283
> AT5G13580.1 | Symbols: | ABC-2 type transporter family protein
| chr5:4370692-4373201 FORWARD LENGTH=2510
Length=2510
Score = 409 bits (221), Expect = 8e-113
Identities = 593/766 (77%), Gaps = 52/766 (7%)
Strand=Plus/Plus
Query 460 GACGGAGAAATCCTCGCCGTTCTGGGTGGAAGCGGAGCTGGAAAATCCACTTTGATAGAC 519
|||||||| || || || || || || | ||| || |||||||||| || |||| ||
Sbjct 539 GACGGAGAGATACTAGCTGTGCTCGGAGCAAGTGGCTCTGGAAAATCGACGCTGATCGAT 598
Query 520 GCATTAGCCGGAA--GAGTGGC-GGAGGATAGCCTGAGAGGCACGGTAACTCTAAACGGA 576
|| |||| | ||| || | || |||| ||| ||| ||| | |||||||||||| |
Sbjct 599 GCGTTAG-C-GAATCGAATCGCTAAAGGA-AGCTTGAAAGGAAATGTAACTCTAAAC-G- 653
Query 577 GAGAAAGTTTTGCAATCTCG--ATTGTTGAAAGTGATCTCGGCGTATGTGATGCAAGACG 634
||| ||||| | |||| ||| | || ||||| |||||| || ||||||||||||||||
Sbjct 654 GAG-AAGTTCT-CAAT-TCGAAAATGCAGAAAGCGATCTCAGCTTATGTGATGCAAGACG 710
Query 635 ATCTTCTTTTTCCGATGCTCACCGTCAAAGAAACCCTAATGTTCGCTTCCGAGTTTCGTC 694
||||||||||||||||||| || || |||||||| ||||||||||| ||||||||||||
Sbjct 711 ATCTTCTTTTTCCGATGCTTACAGTTGAAGAAACCTTAATGTTCGCTGCCGAGTTTCGTC 770
Query 695 TCCCGAGAAG--TTTGCCTAAATCGAAGAAGATGGAGC-GTGTTGAAACCCTAATTGATC 751
||||| |||| ||| | ||||| |||||| | | |||| || || | |||||||
Sbjct 771 TCCCGCGAAGCCTTT-CG-AAATCAAAGAAG-TCTCTCCGTGTCCAAGCCTTGATTGATC 827
Query 752 AATTAGGGCTTAGAAACGCGGCGGATACGGTAATCGGAGATGAAGGACACCGTGGAGTCT 811
| ||||| ||||||||||||||| ||||||| |||||||||||||||||||||||| |||
Sbjct 828 AGTTAGGACTTAGAAACGCGGCGAATACGGTGATCGGAGATGAAGGACACCGTGGAATCT 887
Query 812 CTGGCGGAGAGCGACGGCGCGTGTCAATCGGGATTGATATCATCCACGATCCTATCCTCC 871
|||| |||||||||||||| || ||||||||||| ||||||||||||||||| || || |
Sbjct 888 CTGGAGGAGAGCGACGGCGAGTTTCAATCGGGATCGATATCATCCACGATCCGATTCTGC 947
Query 872 TCTTCCTCGACGAACCAACGTCGGGGT-TAGACTCCACCAA-TGCGTTTATG-GTGGTGC 928
| |||||||| |||||||| ||||| | | ||||| || || ||| | || | || |
Sbjct 948 TTTTCCTCGATGAACCAACTTCGGG-TCTGGACTCTAC-AAGTGC-TCTAAGTGTTATTA 1004
Query 929 AGGTT-TTGAAACGAATTGCGCAGAGTGGCAGTATTGTAATTATGTCGATTCATCAACCT 987
||||| || |||||||| || |||||||| ||||| || || ||| | |||||||||||
Sbjct 1005 AGGTTCTT-AAACGAATCGCTCAGAGTGGAAGTATGGTGATCATGACTCTTCATCAACCT 1063
Query 988 AGTG-CTCGTAT-CATT-GATTTGCTTGATCGGCTTAT-TATCTTATCTCACG-GG--AA 1040
||| | ||| | | || |||| ||||||||| ||| | | |||| || | || || ||
Sbjct 1064 AGTTAC-CGTCTTC-TTCGATT-GCTTGATCGTCTTCTCT-TCTTGTC-C-CGTGGCCAA 1117
Query 1041 GAGTGTGTTCAATGGATCACCGGCTA-GTCTTCCTTCG-TTCTTCTCCA-ACTTTGGTCG 1097
| ||| |||| ||||| || || | | || || || |||||| | | | ||||| |
Sbjct 1118 -ACTGTCTTCAGCGGATCGCCTGCGATG-CTACCG-CGCTTCTTCGC-AGAGTTTGGCCA 1173
Query 1098 TCCCATTCCGGAGAAA-GAGAACATCACAGAGTTCGCACTTG-ATGTAATTCGAGAACTT 1155
||| ||||| || | | |||||| ||| |||||||| ||| || | || || || ||
Sbjct 1174 TCCAATTCCTGA-ACATGAGAACCGCACCGAGTTCGCT-TTGGATTTGATACGTGAGCTG 1231
Query 1156 GAAGGATCCTCTGAAGGAACAAGAGGTTTAGTAGAGTTCAACGAAA 1201
|||||||| ||| ||||||||| ||||||| || |||||| |||
Sbjct 1232 GAAGGATCAGCTGGTGGAACAAGAAGTTTAGTTGAATTCAAC-AAA 1276
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 123711681438
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5