BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg485941
Length=939
Score E
Sequences producing significant alignments: (Bits) Value
AT3G55180.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1493 0.0
AT2G39400.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 749 0.0
> AT3G55180.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr3:20454903-20456682 FORWARD LENGTH=939
Length=939
Score = 1493 bits (808), Expect = 0.0
Identities = 896/939 (95%), Gaps = 4/939 (0%)
Strand=Plus/Plus
Query 1 ATGGTTACGTACAAAGAGGATTATGTTTCAAACTCACGAGGTATTCAACTTTTCACGTGT 60
||||||| ||||||||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct 1 ATGGTTATGTACAAAGAGGATTATGTTTCGAACTCACGAGGGATACAACTTTTCACGTGT 60
Query 61 TCATGGAAACCAGAGGAGCAGCAAGAACCAAAGGCTTTAATCTTTCTCTGTCATGGCTAC 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TCATGGAAACAAGAGGAGCAGCAAGAACCAAAGGCTTTAATCTTTCTCTGTCATGGCTAC 120
Query 121 GCCATGGAATCAAGCATCACCATGAGCAGCACTGCAATGAGGTTGGCTAATGCGGGCTTC 180
|||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||
Sbjct 121 GCCATGGAATCAAGCATCACCATGAGCAGCACTGCAGTGAGGTTGGCCAATGCGGGTTTC 180
Query 181 GCGGTCTATGGAATGGACTATGAAGGGCATGGTAAATCCGGGGGATTAAATGGTTACGTC 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 TCGGTCTATGGAATGGACTATGAAGGGCATGGTAAATCCGGGGGATTAAATGGTTACGTC 240
Query 241 AAAAAATTTGATGATCTTGTTCATGACGTCTATTCTCATTACTCCTCAATTTGTGCGAG- 299
||||| ||||||||||||||||| ||||||| |||||||||||| |||||||| ||||
Sbjct 241 AAAAAGTTTGATGATCTTGTTCAAGACGTCTCTTCTCATTACTCTTCAATTTG--CGAGT 298
Query 300 -GGAAGAGAATAAGGGGAAGATGAGGTTTCTAATGGGAGAATCCATGGGAGGAGCAGTTG 358
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 299 TGGAAGAGAATAAGGGGAAGATGAGGTTTCTAATGGGAGAATCCATGGGAGGAGCAGTTG 358
Query 359 TGTTGCTCTTAGAGAGAAAGAAGCCTGATTTTTGGGACGGTGCCGTTTTGGTCGCACCCA 418
|||| ||||| |||||||||||||| |||||||||||||||||||||| ||||| ||||
Sbjct 359 TGTTACTCTTGGAGAGAAAGAAGCCCAATTTTTGGGACGGTGCCGTTTTAGTCGCTCCCA 418
Query 419 TGTGTAAGTTAGCAGAAGACATAAAGCCACATCCAATGGTGATCTCATTTCTCACAAAGC 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 419 TGTGTAAGTTAGCAGAAGACATAAAGCCACATCCAATGGTGATCTCATTTCTCACAAAGC 478
Query 479 TAACTCGGTTTATTCCAACTTGGAAGATAGTTCCTAGCAACGATATCATTGACGTAGCAT 538
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 479 TAACTCGGTTTATTCCAACTTGGAAGATAGTTCCTAGCAACGATATTATTGACGTAGCAT 538
Query 539 TTAAAGAATCCCACATAAGAAAACAGGTAAGGGACAATGAGTATTGCTACAAGGGCCGGC 598
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 539 TTAAAGAAACCCACATAAGAAAACAGGTAAGGGACAATGAGTATTGCTACAAGGGCCGTC 598
Query 599 CTCGCTTGAAAACCGCTCATCAACTCTTACTGGTTAGCTTGGATCTTGAGAAGAATCTTG 658
||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||
Sbjct 599 CTCGCTTGAAAACCGCTCACCAACTTTTAATGGTTAGCTTGGATCTTGAGAAGAATCTTG 658
Query 659 ATCAGGTATCGATGCCATTTATTGTCCTTCACGGTGAAGATGATAAAGTTACTGACAAAA 718
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 659 ATCAGGTATCGATGCCATTTATTGTCCTTCACGGTGAAGATGATAAAGTTACAGACAAAA 718
Query 719 ACGTAAGCAAACTACTATACGAGGTGGCTTCAAGTTCGGACAAGACTTTCAAGTTATACC 778
|||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 719 ACGTAAGCAAACTATTATACGAGGTAGCTTCAAGTTCGGACAAGACTTTTAAGTTATACC 778
Query 779 CGAACATGTGGCATGGGCTTTTATACGGAGAATCTCCTGAGAATTTGGAGATTGTGTTCA 838
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 779 CGAACATGTGGCATGGGCTCTTATACGGAGAATCTCCTGAGAATTTGGAGATTGTGTTTA 838
Query 839 GTGATATCATAAGTTGGTTAAACGAGAGAGCTTCTGTCACAAACCAAAGGTTGGAGACTG 898
||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct 839 GTGATATCATAAGCTGGTTAAAGGAGAGAGCTTCTGTCACAAACCAAAAGTTGGAGACTG 898
Query 899 AGTTAAAGCAAATGGATGATGGAATTTCTATGCAAAAAT 937
|||||||||| | |||||||| |||||||||||||||
Sbjct 899 AGTTAAAGCATGTAGATGATGGTTTTTCTATGCAAAAAT 937
> AT2G39400.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr2:16452612-16454801 FORWARD LENGTH=1194
Length=1194
Score = 749 bits (405), Expect = 0.0
Identities = 720/870 (83%), Gaps = 29/870 (3%)
Strand=Plus/Plus
Query 1 ATGGTTACGTACAAAGAGGATTATGT-TTCAAACTCACGAGGTATTCAACTT-TTCACGT 58
||||||| ||| ||||||||| ||| || ||||||||||| | | || || ||||| |
Sbjct 108 ATGGTTATGTATGAAGAGGATTTTGTGTT-GAACTCACGAGGCA-TGAAGTTGTTCACTT 165
Query 59 GT-TCATGGAAACCAGAGGAGCAGCAAGAACCAAAGGCTTTAATCTTTCTCTGTCATGGC 117
|| | ||||||||||| || |||||||||||||||| || |||| ||||| ||||||
Sbjct 166 GTGT-ATGGAAACCAG-TGA--AGCAAGAACCAAAGGCATTGCTCTTCCTCTGCCATGGC 221
Query 118 TACGCCATGGAATCAAGCATCACCATGAGCAGCACTGCAATGAGGTTGGCTAATGCGGGC 177
||||| ||||| || ||||||||||||| |||| | || | |||||| || ||||| ||
Sbjct 222 TACGCTATGGAGTCCAGCATCACCATGAACAGCGCAGCCACGAGGTTAGCCAATGCCGGT 281
Query 178 TTCGCGGTCTATGGAATGGACTATGAAGGGCATGGTAAATCCGGGGGAT-TAAATGGTTA 236
|| || || |||||||||||||||||||| ||||| ||||| | ||| | ||||||||||
Sbjct 282 TTTGCCGTATATGGAATGGACTATGAAGGACATGGAAAATCTGAGGG-TCTAAATGGTTA 340
Query 237 CGTCAAAAAATTTGATGATCTTGTTCATGACGTCTATTCTCATTACTCCT-CAATTTGTG 295
| ||| || ||||||||||| ||| |||| |||| | |||||| | || |||||||||
Sbjct 341 CATCAGTAACTTTGATGATCTCGTTGATGATGTCTCTAATCATTA-TTCTACAATTTGTG 399
Query 296 CGAGGGAAGAGAATAAGGGGAAGATGAGGTTTCTAATGGGAGAATCCATGGGAGGAGCAG 355
|||||||||||| ||||||||||||||||| ||| | ||||||||||||||||||||||
Sbjct 400 AGAGGGAAGAGAACAAGGGGAAGATGAGGTTCCTACTTGGAGAATCCATGGGAGGAGCAG 459
Query 356 TTGTGTTGCTCTTAGAGAGAAAGAAGCCTGATTTTTGGGACGGTGCCGTTTTGGTCGCAC 415
||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 460 TTGTGTTGCTCTTAGCCAGAAAGAAGCCTGATTTTTGGGACGGTGCCGTTTTGGTAGCAC 519
Query 416 CCATGTGTAAGTTAGCAGAAGACATAAAGCCACATCCAATGGTGATCTCATTTCTCA-CA 474
||||||||||||||||||| || ||||||||||||||| | ||||||||| | || | ||
Sbjct 520 CCATGTGTAAGTTAGCAGACGAGATAAAGCCACATCCAGTAGTGATCTCAATCCTTATCA 579
Query 475 AAGCTAACTCG-GTTTATTCCAACTTGGAAGATAGTTCCTAGCAAC-GATATCATTGACG 532
| | || | | |||||||||||| ||||| |||||||| || || ||||| ||||||
Sbjct 580 A-GTTAGC-CAAGTTTATTCCAACGTGGAAAATAGTTCC-AGGAAATGATATTATTGACA 636
Query 533 TAGCATTTAAAGAATCC-CACATAAGAAAACAGGTAAGGGACAATGAGTATTGCTACAAG 591
| ||| |||||||| || ||||| ||||| ||||| ||||| || |||||||||| ||
Sbjct 637 TTGCAATTAAAGAA-CCTCACATCAGAAATCAGGTGAGGGAGAACAAGTATTGCTATAAA 695
Query 592 GGCCGGCCTCGCTTGAAAACCGC-TCATCAACTCTTACTGGTTAGCTTGGATCTTGAGAA 650
|||||||||||| | || ||||| | | |||||||| |||||||||| |||||||||||
Sbjct 696 GGCCGGCCTCGCCTCAACACCGCCT-ACCAACTCTTGTTGGTTAGCTTAGATCTTGAGAA 754
Query 651 GAATCTTGATCAGGTATCGATGCCATTT-ATTGTCCTTCACGGTGAAGATGATAAAGTTA 709
||||||| | |||||||| || || ||| ||||| |||||||| |||||||||||||| |
Sbjct 755 GAATCTTCACCAGGTATCAATTCC-TTTCATTGTTCTTCACGGAGAAGATGATAAAGTGA 813
Query 710 CTGACAAAAACGTAAGCAAACTACTATACGAGGTGGCTTCAAGTTCGGACAAGACTTTCA 769
| || |||| | |||||||| | ||||||| ||||||||||| ||||||||||| ||||
Sbjct 814 CGGATAAAAGCATAAGCAAAATGTTATACGAAGTGGCTTCAAGCTCGGACAAGACATTCA 873
Query 770 AGTTATACCCGAACATGTGGCATGGGCTTT-TA-TACGGAGAATCTCCTGAGAATTTGGA 827
|| | ||||| || |||||||||| |||| | || || ||| || ||| |||| ||
Sbjct 874 AGCTGTACCCCAAAATGTGGCATG--CTTTGTTGTATGGGGAAACTAATGAAAATTCAGA 931
Query 828 GATTGTGTTCAGTGATATCATAAGTTGGTT 857
|||||||| |||||||||||| |||||
Sbjct 932 AATTGTGTTTGGTGATATCATAAACTGGTT 961
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 45914010358
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5