BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg485944 Length=1088 Score E Sequences producing significant alignments: (Bits) Value AT3G55230.1 | Symbols: | Disease resistance-responsive (dirige... 1526 0.0 AT2G39430.1 | Symbols: | Disease resistance-responsive (dirige... 490 1e-137 > AT3G55230.1 | Symbols: | Disease resistance-responsive (dirigent-like protein) family protein | chr3:20471791-20472889 FORWARD LENGTH=1099 Length=1099 Score = 1526 bits (826), Expect = 0.0 Identities = 1011/1096 (92%), Gaps = 29/1096 (3%) Strand=Plus/Plus Query 1 AAAAGAACGAACAATGGCTAAAGCTCTTAGCCTAACAATCTTTCTCTTCCTCTTGATAGC 60 ||||||| |||||||||| |||||||||||||| |||||||||||||| ||||||||||| Sbjct 21 AAAAGAAAGAACAATGGCCAAAGCTCTTAGCCTTACAATCTTTCTCTTTCTCTTGATAGC 80 Query 61 TTCCAGTGTCCAATCCGCTCGACTTCTCGATGAGGTTCAAACTCAGCCACAATTAGTCCC 120 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 81 TTCCAATGTCCAATCCGCTCGACTTCTCGATGAGGTTCAAACTCAGCCACAATTAGT-CC 139 Query 121 AGGCGGCCAAATCCCCGCGGTACCGAAAGAGGAAGATGGTAGTCCACAAGCCGTAACAAC 180 | || | ||||||| |||||||||||| |||||||||||||||||| | Sbjct 140 ---C--CC--A-------GGTACCGGAAGAGGAAGATGATAGTCCACAAGCCGTAAC-A- 183 Query 181 ACAAGCTCCAATACCAATTCCTCTCCCAGGACCCGCGGCGGGAGGACAAGAGCCAATCCT 240 |||| |||||| |||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct 184 ACAA-CTCCAACACCAATTCCTCTCCCAGGACCCGCCACGGGAGGACCCGAGCCAATCCT 242 Query 241 AGAGTTCTTTATGCATGACGTGCTAGGCGGGTCACACCCGTCAGCACGTGTGGTTACAGG 300 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 243 AGAGTTCTTTATGCATGACGTGCTAGGCGGGTCACACCCATCAGCACGTGTGGTTACAGG 302 Query 301 GATAGTAGCACAAACAGAGGTGAACGGGATACCGTTTTCTAAATCCAGCAACAACATTTT 360 |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct 303 GATAGTAGCACAAACAGAGGTGAATGGAATACCGTTTTCTAAATCCAGCAACAACATTTT 362 Query 361 CCCCGTAGATAACGCAGTGCCGCTTGTGAACGCAAACAGCATCAACAATTTAATCAACCC 420 ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 363 CCCAGTAGATAACGCAGTGCCGCTTGTGAACGCAAACAGCATCAACAACTTAATCAATCC 422 Query 421 AAACACAGCTCCACTCCTCACTGGACTTAGTGGCTCTCAAGCCAACACCGTCATTCAAAA 480 |||||||||||||||||| || ||||||||||||||||||||||||||||| || ||||| Sbjct 423 AAACACAGCTCCACTCCTAACAGGACTTAGTGGCTCTCAAGCCAACACCGTAATCCAAAA 482 Query 481 CAGTAACGGTAACTCCCAAGGATCCCTTAGCTCCAACAACCTTCCCTTTGTAACCACGGG 540 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 483 CAGTAACGGTAACTCTCAAGGATCCCTTAGCTCCAACAACCTTCCCTTTGTAACCACGGG 542 Query 541 TCAGCTCCCTCCTATAGCTGCCCTCCAACAGCTCATGTTTGGCTCTATCACAGTGGTTGA 600 |||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 543 TCAGCTCCCTCCCATAGCTGCCCTCCAACAGCTTATGTTTGGCTCTATCACCGTGGTTGA 602 Query 601 CGATGAGCTCACTGAAGGCCATGAGTTGGGCTCTGCAATCATTGGCAGAGCCCAAGGGTT 660 |||||||||||| || |||||||||||||||||||| |||||||| |||||||||||||| Sbjct 603 CGATGAGCTCACCGAGGGCCATGAGTTGGGCTCTGCGATCATTGGGAGAGCCCAAGGGTT 662 Query 661 TTACCTCGCTAGCTCTTTGGACGGAACTAGCCAGACCCTTTCCTTAACCGTGTTGCTCCA 720 ||| ||||||||||||||||| |||||||||||||||||||| || || ||||| ||||| Sbjct 663 TTATCTCGCTAGCTCTTTGGATGGAACTAGCCAGACCCTTTCGTTGACAGTGTTACTCCA 722 Query 721 CGAAGAGCATGATCACCATGACACCCTTGATGATGCGATCAGCTTCTTCGGGGTTCACCG 780 |||||| |||||||| |||||||||||||||||||| ||||||||||| ||||||||||| Sbjct 723 CGAAGATCATGATCATCATGACACCCTTGATGATGCCATCAGCTTCTTTGGGGTTCACCG 782 Query 781 AACCGCTTCTCATGCCTCGCATATCGCTGTTGTGGGTGGGACTGGCAGATTCGAGCATGC 840 ||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 783 AACCGCTTCTCATGCGTCGCATATCGCTGTTGTGGGTGGAACTGGGAGATTCGAGCATGC 842 Query 841 TAAAGGGTATGCTGTCGTGGAGACTCTACACAACCAGGAAGACCAACATGTTACTGATGG 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 843 TAAAGGGTATGCTGTCGTGGAGACTCTACACAACCAGGAAGACCAACATGTTACTGATGG 902 Query 901 TCCATGATACCATTCTCCATTTCAGTGTTTATCTTACCTACTACAAAGCTTGAAGAGTAA 960 || |||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct 903 TC-ATGATACCATTCTCCATTTCAGTGTTTATCTTACATACTACAAAGCTTGAAGAGTTA 961 Query 961 TGGCATTTGTTGTTAA-AAAATTCCTCTGTTTCATATGTATGTTCTTGTTTACTA-GCTT 1018 |||||||||||| || |||||||||||||||| | ||||||||||| |||| || | || Sbjct 962 TGGCATTTGTTGA-AAGAAAATTCCTCTGTTTCGTTTGTATGTTCTTCTTTA-TAAGTTT 1019 Query 1019 GATGTGTGGCCTTTATTGTGTTGTGCACGTTTACTGTATTTAAAAA--G----TTAAATG 1072 |||||||| || ||||||||||||||||||||||||| | ||||| | ||||||| Sbjct 1020 AATGTGTGGTCTATATTGTGTTGTGCACGTTTACTGTACTGAAAAAAAGAAAGTTAAATG 1079 Query 1073 AGAATCTTTGTCTTTA 1088 | |||||||||||||| Sbjct 1080 ACAATCTTTGTCTTTA 1095 > AT2G39430.1 | Symbols: | Disease resistance-responsive (dirigent-like protein) family protein | chr2:16463347-16464531 FORWARD LENGTH=1185 Length=1185 Score = 490 bits (265), Expect = 1e-137 Identities = 586/740 (79%), Gaps = 26/740 (4%) Strand=Plus/Plus Query 229 AGAGCCAATCCTAGAGTTCTTTATGCATGACGTGCTAGGCGGGTCACACCCGTCAGCACG 288 ||||||| | |||||||||||||||||||||||||||||||| || ||||| ||||| || Sbjct 324 AGAGCCATTACTAGAGTTCTTTATGCATGACGTGCTAGGCGGATCTCACCCATCAGCTCG 383 Query 289 TGTGGTTACAGGGATAGTAGCACAAACAGAGGTGAACGGGATACCGTTTTCTAAAT-CCA 347 |||||||||||| |||||||| ||||| || |||||||| ||||| || || ||| ||| Sbjct 384 TGTGGTTACAGGTATAGTAGCTCAAACTGAAGTGAACGGAATACCATTCTC-AAAGGCCA 442 Query 348 GCAACAACATTTTCCCCGTAGATAACGCAGTGCCGCTTGTGAACGCAAACAGCATCAACA 407 | |||| ||||||||| || || || | ||| || || || ||| |||||| |||||||| Sbjct 443 GTAACAGCATTTTCCCGGTTGACAATGGAGTCCCACTGGTCAACTCAAACAACATCAACA 502 Query 408 ATTTAATCAACCCAAACACAGCTCCACTCCTCACTGGACTTAGTGGCT-CTCAAGCCAAC 466 | | || |||||||||||||||||||| ||||| |||||| | || | ||||| || | Sbjct 503 GTGTCATTAACCCAAACACAGCTCCACTTCTCACCGGACTTGGCGG-TGCTCAAACCTCC 561 Query 467 ACCGTCATTCAAAACAGTAACGGTAACTCCCAAGGAT-CCCTTAGCTCCAACAACCTTCC 525 |||||||| ||||||| |||||| || ||| || ||| |||||||| |||||| || || Sbjct 562 ACCGTCATCCAAAACACTAACGGAAATTCC-AACGATGCCCTTAGCGCCAACAGTCT-CC 619 Query 526 CTTT-GTAACCAC-GGGTCAGCTCCCTCCTA-TAGCTGCCCTCCAACAGCTCATGTTTGG 582 |||| ||||| | ||| | || ||||| | ||||||||||| || |||||||| || Sbjct 620 CTTTTGTAACTGCCGGGA-ACCTTCCTCCCGGT-GCTGCCCTCCAGCATCTCATGTTCGG 677 Query 583 CTCTATCACAGTGGTTGACGATGAGCTCACTGAAGGCCATGAG-TTGGGCTCTGCAATCA 641 | || || || || || |||||||| || ||| |||| ||| |||| ||| || | | Sbjct 678 AACCATAACCGTTGTAGATGATGAGCTAACCGAAAGCCACGAGCTTGG-CTCAGCCGTTA 736 Query 642 TTGGCAGAGCCCAAGGGTTTTACCTCGCTAGCTCTTTGGACGGAACTAGCCAGACCCTTT 701 | || ||||| ||||| |||||| | || || || |||||||||| || ||||| |||| Sbjct 737 TAGGGAGAGCTCAAGGCTTTTACTTGGCCAGTTCCCTGGACGGAACAAGTCAGACTCTTT 796 Query 702 C-CTTAACCGTGTTGCTCCACGAAGAGCATGATCACCATGACACCCTT-GATGATGCGAT 759 | || | | || ||||| || | |||||||| || |||||||| || || ||||| || Sbjct 797 CTCTGA-CTGTATTGCTACATGGTGAGCATGACCAGCATGACACT-TTAGACGATGCCAT 854 Query 760 CAGCTTCTTCGGGGTTCACCGAACCGCTTCTCATGCCTCGCATATCGCTGTTGTGGGTGG 819 || ||||| ||||||||| ||||||| ||||||||||| || ||||| ||| | || || Sbjct 855 TAGTTTCTTTGGGGTTCACAGAACCGCCTCTCATGCCTCCCAGATCGCGGTTATAGGCGG 914 Query 820 GACTGGCA-GATTCGAGCATGCTAAAGGGTATGCTGTCGTGGAGACTCTACACAACCAGG 878 ||| || | | || || || || ||||||||||| | ||||| ||||| || ||||||| Sbjct 915 GACCGGGAAGTTT-GAACACGCCAAAGGGTATGCCATAGTGGAAACTCTGCATAACCAGG 973 Query 879 A-AGACCAACATGTTACTGATGGTCCATGATACCATTCTCCATTTCAGTGTTTATCTTAC 937 | | |||| ||| | |||||||||| | || ||||| |||||||||||||| || ||||| Sbjct 974 ACA-ACCAGCATATCACTGATGGTCAA-GACACCATCCTCCATTTCAGTGTATACCTTAC 1031 Query 938 CTACTACAAAGCTTGAAGAG 957 |||| | || |||||||||| Sbjct 1032 CTAC-A-AA-GCTTGAAGAG 1048 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 53312978790 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5