BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486035
Length=1758
Score E
Sequences producing significant alignments: (Bits) Value
AT3G55940.1 | Symbols: | Phosphoinositide-specific phospholipa... 2878 0.0
AT3G08510.1 | Symbols: ATPLC2, PLC2 | phospholipase C 2 | chr3:... 1452 0.0
> AT3G55940.1 | Symbols: | Phosphoinositide-specific phospholipase
C family protein | chr3:20747787-20750184 FORWARD LENGTH=1755
Length=1755
Score = 2878 bits (1558), Expect = 0.0
Identities = 1693/1759 (96%), Gaps = 5/1759 (0%)
Strand=Plus/Plus
Query 1 ATGTCGAAGCAAACATACAAAGTCTGTTTCTGTTTCCGTCGGAGGTATCGACACACTGTG 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1 ATGTCGAAGCAAACATACAAAGTCTGTTTCTGTTTCCGTCGGAGGTACCGACACACTGTG 60
Query 61 TCCGTTGCTCC-GCCTGAGATCAAGACACTTTTCGACAAATATTCCGACAAAGGTCTCAT 119
||||| ||||| | |||||||||| |||||||||||||| || |||||||||||||||||
Sbjct 61 TCCGTAGCTCCTG-CTGAGATCAAAACACTTTTCGACAATTACTCCGACAAAGGTCTCAT 119
Query 120 GACAACCGATCTCCTCCTCAGATTCCTAATCGATGTTCAGAAACAAGACAAAGCCACGAA 179
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 120 GACTACCGATCTCCTCCTCAGATTCCTAATCGATGTTCAGAAACAAGACAAAGCCACGAA 179
Query 180 AGAAGAAGCTCAAGAAATCGTCAATGCTTCATCTTCTCTTCTTCATCGTAATGGTCTCCA 239
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 180 AGAAGAAGCTCAAGATATCGTCAATGCTTCTTCTTCTCTTCTTCATCGTAATGGTCTCCA 239
Query 240 CCTTGATGCTTTCTTCAAATACCTTTTCGCTGTTACCAACTCTCCTCTTTCTTCTCAGGA 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 240 CCTTGATGCTTTCTTCAAATACCTTTTCGCTGTTACCAACTCTCCTCTTTCTTCTCTTGA 299
Query 300 GGTGCATCAAGATATGGATGCTCCATTATCACATTATTTCATATTTACAGGACATAATTC 359
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 300 GGTGCATCAAGATATGGATGCTCCATTATCACATTATTTCATATATACAGGACATAATTC 359
Query 360 GTATTTAACTGGTAATCAACTGAGTAGTGATTGCAGTGAATTGCCTATCATTGAAGCATT 419
||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 360 GTATTTAACAGGTAATCAACTAAGTAGTGATTGCAGTGAATTGCCTATCATTGAGGCATT 419
Query 420 GAAAAAAGGTGTTAGAGTTATTGAGTTAGATATTTGGCCAAACTCTGATGAAGATGGTAT 479
|||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 420 GAAAAAAGGTGTTAGAGTTATTGAATTAGATATTTGGCCTAACTCTGATGAAGATGGTAT 479
Query 480 CGATGTTCTTCATGGAAGGACTCTTACATCACCTGTGGAGCTGATCAAATGTCTAAGAGC 539
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 480 CGATGTTCTTCATGGAAGGACTCTTACATCACCTGTGGAGCTGATAAAATGTCTAAGAGC 539
Query 540 TATTAGAGAACATGCTTTTGATGTATCTGATTATCCAGTTGTTGTTACTCTTGAAGATCA 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 TATTAGAGAACATGCTTTTGATGTATCTGATTATCCAGTTGTTGTTACTCTTGAAGATCA 599
Query 600 TCTTACTCCAAAACTCCAAGCTAAAGTTGCTGAGATGGTTACAGATATATTTGGAGAAAT 659
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 TCTTACTCCTAAACTCCAAGCTAAAGTTGCTGAGATGGTTACAGATATATTTGGAGAAAT 659
Query 660 GTTGTATACTCCTCCTTCAGGGGAATGTTTGAAGGAGTTTCCATCGCCCGCGTTTTTGAA 719
||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 660 GTTGTTTACTCCTCCTTCAGGGGAATGTTTGAAGGAGTTTCCATCGCCGGCGTTTTTGAA 719
Query 720 AAATCGTATTATGATCTCAACTAAACCTCCTAAAGAGTATAAGGCAGCAACAGATGATGA 779
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 AAAGCGTATTATGATCTCAACTAAACCTCCTAAAGAGTATAAGGCAGCAACAGATGATGA 779
Query 780 TTTGGTGAAAAAAGGTAGGAATTTGGGTGATGAAGAAGTTTGGGGAAGAGAAGTTCCAAG 839
||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 780 TTTGGTGAAAAAAGGAAGGGATTTGGGTGATAAAGAAGTTTGGGGAAGAGAAGTTCCAAG 839
Query 840 CTTTATTCGAAGGGACAGAAGTGTTGACAAGAATGATTCAAATGGAgatgatgacgatga 899
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 840 CTTTATTCGAAGGGACAGAAGTGTTGACAAGAATGATTCAAACGGAGATGATGATGATGA 899
Query 900 cgatgatgatgatgatgatgatgatgatgatggtgatgatAAAATTAAGAAGAATGCACC 959
|||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 900 ---TGATGACGATGACGATGATGATGATGATGGTGATGATAAGATTAAGAAGAATGCACC 956
Query 960 ACCGGAATATAAGCATTTGATTGCAATCGAAGCCGGGAAACCGAAAGGCGGGATAACTGA 1019
|||||||||||||||| ||||||||||||| || ||||||||||||||||| ||||||||
Sbjct 957 ACCGGAATATAAGCATCTGATTGCAATCGAGGCTGGGAAACCGAAAGGCGGAATAACTGA 1016
Query 1020 ATGTTTGAAGGTGGATCCTGATAAAGTAAGACGGCTTAGCTTGAGTGAAGAACAACTTGA 1079
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1017 ATGTTTGAAGGTGGATCCTGATAAAGTAAGACGGCTTAGCTTAAGTGAAGAACAACTTGA 1076
Query 1080 AAAGGCCTCAGAAAAATATGCGAAACAGATTGTGAGGTTTACTCAGAGGAACTTGCTTCG 1139
||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||
Sbjct 1077 AAAGGCCTCAGAAAAATATGCTAAACAGATTGTGAGGTTCACTCAGAGGAATTTGCTACG 1136
Query 1140 GGTTTACCCGAAAGGAACTAGAATTACTTCATCAAACTATAACCCTCTGATTGCTTGGAG 1199
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1137 GGTTTATCCGAAAGGAACTAGAATTACTTCATCAAACTATAACCCTCTGATCGCTTGGAG 1196
Query 1200 CCATGGAGCTCAAATGGTGGCTTTCAATATGCAGGGACTTGGAAGATCATTGTGGGTAAT 1259
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1197 CCATGGAGCTCAAATGGTGGCTTTCAATATGCAGGGACTTGGACGATCATTGTGGGTAAT 1256
Query 1260 GCAAGGAATGTTTAGAGCCAATGGAGGATGTGGCTACATCAAGAAACCTGATCTTTTGCT 1319
||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1257 GCAAGGAATGTTTAGAGGCAATGGAGGATGTGGCTACATTAAGAAACCTGATCTTTTGCT 1316
Query 1320 AAAATCCGATGCTGTATTTGACCCAGAAGCTACATTACCTGTAAAAACAACACTAAGGGT 1379
|||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1317 GAAATCCAACGCTGTATTTGACCCGGAAGCTACATTACCTGTAAAAACAACACTAAGGGT 1376
Query 1380 AACTATATACATGGGAGAAGGATGGTACTACGATTTCCCGCACACACACTTTGATCGATA 1439
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 1377 AACTATATACATGGGAGAAGGATGGTACTACGATTTCCCGCATACGCACTTTGATCGATA 1436
Query 1440 TTCTCCACCTGATTTCTATACAAGGGTCGGGATCGCTGGAGTTCCCGCGGATACAATAAT 1499
||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct 1437 TTCTCCACCTGATTTCTATACAAGGGTCGGGATTGCTGGAGTTCCCGCGGATACAGTAAT 1496
Query 1500 GAAGAAGACGAAATCATTAGAGGATAATTGGATACCAGCTTGGGACGAGGTTTTTGAGTT 1559
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1497 GAAGAAGACGAAAACATTAGAGGATAATTGGATACCAGCTTGGGACGAGGTTTTTGAGTT 1556
Query 1560 CCCATTAACAGTTCCAGAGCTTGCTCTTCTACGTATTGAGGTACATGAATATGACATGTC 1619
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 1557 CCCATTAACAGTTCCAGAGCTTGCTCTTCTACGTATCGAGGTACATGAGTATGACATGTC 1616
Query 1620 GGAGAAAGATGATTTTGGAGGCCAAACTTGCTTGCCGGTTTGGGAGCTAAGGCAAGGAAT 1679
|||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 1617 TGAGAAAGACGATTTTGGAGGCCAAATTTGCTTGCCGGTTTGGGAGCTGAGGCAAGGAAT 1676
Query 1680 ACGTGCCGTTCCTCTGCGTAACCAGGATGGTGTGAAGTGTAGATCCGTGAAGCTTCTTTT 1739
||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 1677 ACGTGCCGTTCCTCTCCGTAACCAGGATGGTGTCAAGTGTAGATCCGTGAAGCTTCTTGT 1736
Query 1740 GCGGTTGGAGTTTGTGTGA 1758
|||||||||||||||||||
Sbjct 1737 GCGGTTGGAGTTTGTGTGA 1755
> AT3G08510.1 | Symbols: ATPLC2, PLC2 | phospholipase C 2 | chr3:2582362-2585851
REVERSE LENGTH=2305
Length=2305
Score = 1452 bits (786), Expect = 0.0
Identities = 1477/1799 (82%), Gaps = 94/1799 (5%)
Strand=Plus/Plus
Query 1 ATGTCGAAGCAAACATACAAAGTCTGTTTCTG-TTTCCGTCGGAGGTATCGACACACTGT 59
|||||||||||||| |||||||| |||||||| ||| || ||||||| ||| ||||||
Sbjct 296 ATGTCGAAGCAAACGTACAAAGTGTGTTTCTGCTTT-CGCCGGAGGTTTCGTTACACTGC 354
Query 60 GTCCGTTGCTCCGCCTGAGATCAAGA-CACTTTTCGACAAA-TATTCCGACAAAGGTCTC 117
|| | || |||| ||||||||||| || ||||||| ||| || || || || || |
Sbjct 355 ATCGGAGGCACCGCGTGAGATCAAGACCA-TTTTCGA-AAAGTACTCAGAGAATGGAGTT 412
Query 118 ATGACAACCGATC-TCCTCCTCAGATTCCTAATCGATGTTCAGAAACAAGACAAAGCCAC 176
||||| |||| | |||| ||| || || |||||||||||||||||||| ||||||||
Sbjct 413 ATGACCGTTGATCAT-CTCCACAGGTTTCTGATCGATGTTCAGAAACAAGATAAAGCCAC 471
Query 177 GAAAGAAGAAGCTCAAG-AAATCGTCAATGCTTCATCTTCTCTTCTTCATCGTAATGGTC 235
| |||||| || | || ||| ||||| || |||||||||||||||||||||||||||
Sbjct 472 CAGAGAAGATGCAC-AGTCAATTATCAATTCTGCATCTTCTCTTCTTCATCGTAATGGTC 530
Query 236 TCCACCTTGATGCTTTCTTCAAATACCT-TTTCGCTGTTACCAACTCTCCTCTTTCTTCT 294
|||| ||||||||||||||||| ||||| ||| | || || ||| |||||||| || ||
Sbjct 531 TCCATCTTGATGCTTTCTTCAAGTACCTCTTTGG-TGATAATAACCCTCCTCTTGCT-CT 588
Query 295 C-AGGAGGTGCATCAAGATATGGATGCTCC-ATTATCACATTATTTCATATTTACAGGAC 352
| | |||||||||| || ||||||||||| || ||| |||||||||||||| || || |
Sbjct 589 CCATAAGGTGCATCATGACATGGATGCTCCTAT-ATCGCATTATTTCATATTCACTGGTC 647
Query 353 ATAATTCGTATTTAACTGGTAATCAACTGAGTAGTGATTGCAGTGAATTGCCTATCATTG 412
||||||| ||| | ||||||||||| ||||| ||||| || ||||| | ||||| ||||
Sbjct 648 ATAATTCTTATCTGACTGGTAATCAGCTGAGCAGTGACTGTAGTGAGGTACCTATTATTG 707
Query 413 AAGCATTGAAAAAAGGTGTTAGAGTTATTGAGTTAGATATTTGGCCAAACTCTGATGAAG 472
| || ||||| |||||||||||||| ||||| || ||||| ||||| || || | |||
Sbjct 708 ATGCGTTGAAGAAAGGTGTTAGAGTCATTGAATTGGATATATGGCCCAATTCCAACAAAG 767
Query 473 ATGGTATCGATGTTCTTCATGGAAGGACTCTTAC-ATCACCTGTGGAGCTGATCAAATGT 531
| | ||| ||||||||||| |||| |||||| || | ||||||||| | |||||||||||
Sbjct 768 ACGATATTGATGTTCTTCACGGAATGACTCTCACTA-CACCTGTGGGGTTGATCAAATGT 826
Query 532 CT-AAGAGCTATTAGAGAACATGCTTTTGATGTATCTGATTATCCAGTTGTTGTTACTCT 590
|| || |||||| |||| |||||| |||||||||||||| ||||| |||||||| |||||
Sbjct 827 CTCAA-AGCTATCAGAGCACATGCCTTTGATGTATCTGACTATCCTGTTGTTGTAACTCT 885
Query 591 TGAAGATCATCTTACTCCAAAACTCCAAG-CTAAAGTTGCTGAGATGGTTACAGATATAT 649
||||||||||||||||||| | || || | |||||||||||||||||||||| || ||||
Sbjct 886 TGAAGATCATCTTACTCCAGATCTTCA-GTCTAAAGTTGCTGAGATGGTTACTGAGATAT 944
Query 650 TTGGAGAAATGT-TGTATACTCCTCCT-TCAGGG-GAATGTTTGAAGGAGTTTCCATCGC 706
|||| ||||| | ||| |||||||||| | ||| |||| |||||||||||| |||||||
Sbjct 945 TTGGGGAAAT-TCTGTTTACTCCTCCTGT--GGGAGAATCTTTGAAGGAGTTCCCATCGC 1001
Query 707 CCG-CGTTTTTGAAAA-ATCGTATTATGATCTCAACTAAACCTCCTAAAGAGTATAAGGC 764
| | | ||| |||| | |||||||| |||||||| ||||| || |||||||| ||||
Sbjct 1002 CAAAC-TCTTTAAAAAGA-CGTATTATCATCTCAACCAAACCCCCAAAAGAGTACAAGGA 1059
Query 765 AGCAACAGATGATG-ATTTGGTGAAAAAAGGTAG-GAATTTGGGTGATGAAGAAGTTTGG 822
|| || ||||| || | ||||| | ||||||| || || ||| |||||||||||||||
Sbjct 1060 AGGAAAAGATG-TGGAAGTGGTGCAGAAAGGTAAAGACTTGGGG-GATGAAGAAGTTTGG 1117
Query 823 GGAAGAGAAGTTCCAAGCTTTATTC-GAAGGGACAGAAGTGTTGAC-AAGAATGA-TTCA 879
|||||||||||||| |||||||||| || || ||| ||||| | | ||| |||| || |
Sbjct 1118 GGAAGAGAAGTTCCGAGCTTTATTCAGA-GGAACAAAAGTGAAG-CTAAGGATGACTT-A 1174
Query 880 AATGGAgatgatgacgatgacgatgatgatgatgatgatgatgatgatgatggtgatgat 939
||||| ||||||| |||||||||||||||||||| | || | | | | | | |||
Sbjct 1175 GATGGAAATGATGATGATGACGATGATGATGATGA--A-GAC-A--A-G-TC-TAA-GAT 1224
Query 940 AAAATTAAGAAGAATGCACCACCGGAATATAAGCATTTGATTGCAATCGAAGCCGGGAAA 999
| || ||||||||| | ||||| ||||||||||||||| | || ||||||
Sbjct 1225 ----T-AA------TGCACCACCCCAGTATAAACATTTGATTGCAATCCATGCTGGGAAA 1273
Query 1000 CCGAAAGGCGGGATAACTGAATGTTTGAAGGTGGATCCTGATAAAGTAAGACGGCTTAGC 1059
|| |||||||| || ||||| ||||| ||||| |||||||| || || ||||| ||||||
Sbjct 1274 CCAAAAGGCGGAATTACTGAGTGTTTAAAGGTAGATCCTGACAAGGTTAGACGCCTTAGC 1333
Query 1060 TTGAGTGAAGAACAACTTGAAAAGGCCTCAGAAAAATATGCGAAACAGATTGTGAGGTTT 1119
|| || |||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct 1334 TTAAGCGAAGAACAACTTGAAAAGGCAGCAGAAAAATATGCGAAGCAGATTGTGAGGTTT 1393
Query 1120 ACTCAG-AGGAACTTGCTTCGGGTTTACCCGAAAGGAACTAGAATTACTTCATCAAACTA 1178
|||||| | || ||||| || | ||||| |||||||||||| | || |||||||| ||
Sbjct 1394 ACTCAGCAC-AATTTGCTGAGGATATACCCAAAAGGAACTAGAGTCACATCATCAAATTA 1452
Query 1179 TAACCC-TCTGATTG-CTTGGAGCCATGGAGCTCAAATGGTGGCTTTCAATATGCAGGGA 1236
||||| | || ||| || ||||||| || |||||||||||||||||||||||||||||
Sbjct 1453 CAACCCGT-TGGTTGGCT-GGAGCCACGGTGCTCAAATGGTGGCTTTCAATATGCAGGGG 1510
Query 1237 CT-TGGAAGATCATTGTGGGTAATGCAAGGAATGTTTAGAGCCAATGGAGGATGTGGCTA 1295
| |||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||
Sbjct 1511 -TATGGAAGATCATTGTGGCTAATGCAGGGAATGTTTAGAGCCAATGGCGGATGTGGCTA 1569
Query 1296 CATCAAGAAACCTGATCTTTTGCT-AAAA-TC---CG-AT-GCTG---TATTTGACCCAG 1345
||||||||||||||| ||| |||| |||| | || || | || |||||||||||
Sbjct 1570 CATCAAGAAACCTGACCTTCTGCTGAAAAGTGGTTCGGATAG-TGACATATTTGACCCAA 1628
Query 1346 AAGCTACAT-TACCTGTAAAAACAACACTAAGGGTAACTATATACATGGGAGAAGGATGG 1404
||||||| | ||||||| ||||||||||| ||||||||| |||||||||||||||| |||
Sbjct 1629 AAGCTAC-TCTACCTGTGAAAACAACACTTAGGGTAACTGTATACATGGGAGAAGGCTGG 1687
Query 1405 TACTACGATTTCCCGC-ACACACACTTTGATCGATATTCTCCACCTGATTTCTATACAAG 1463
|||| ||||||| || ||||||||||||| | |||||| || ||||| |||||||||||
Sbjct 1688 TACTTTGATTTCC-GCCACACACACTTTGACCAATATTCACCGCCTGACTTCTATACAAG 1746
Query 1464 GGTCGGGATCGCTGGAGTTCCCGCGGATACAATAATGAAGAAGACGAAATCATTAGAGGA 1523
||| ||||| ||||||||||| | ||||||| ||||||||||||||||| || | |||||
Sbjct 1747 GGTTGGGATAGCTGGAGTTCCAGGGGATACAGTAATGAAGAAGACGAAAACACTGGAGGA 1806
Query 1524 TAATTGGATACCAGCTTGGGACGAGGTTTTTGAGTTCCCATTAACAGTTCCAGAGCTTGC 1583
||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||| ||
Sbjct 1807 TAATTGGATACCAGCTTGGGATGAGGTGTTTGAGTTCCCATTAACCGTTCCAGAGCTGGC 1866
Query 1584 TCTTCTACGTATT-GAGGTACATGAATATGACATGTCGGAGAAAGATGATTTTGGAGGCC 1642
|| ||||| ||| || || ||||| ||||||||||| |||||||||||||||||||| |
Sbjct 1867 CCTGCTACG-ATTAGAAGTGCATGAGTATGACATGTCAGAGAAAGATGATTTTGGAGGAC 1925
Query 1643 AAACTTGCTTGCCGGTTTGGGAGCTAAG-GCAAGGAATACGTGCCGTTCCTCTGCGTAAC 1701
| || ||||| ||||||||||||||||| | |||||||| | || ||||| | | || |
Sbjct 1926 AGACATGCTTACCGGTTTGGGAGCTAAGCG-AAGGAATAAGAGCATTTCCTTTACATAGC 1984
Query 1702 CAGGAT-GGTGTGAAGTGTAGATCCGTGAAGCTTCTTTTGC-GGTTGGAGTTTGTGTGA 1758
| ||| || | ||||| | |||||| |||||||| || ||| |||||||||||||
Sbjct 1985 C-GGAAAGGAGAGAAGTACAAATCCGTTAAGCTTCTCGTGAAGGT-GGAGTTTGTGTGA 2041
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 86947343940
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5