BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486055
Length=2448
Score E
Sequences producing significant alignments: (Bits) Value
AT3G56140.1 | Symbols: | Protein of unknown function (DUF399 a... 3812 0.0
AT2G40400.1 | Symbols: | Protein of unknown function (DUF399 a... 1940 0.0
> AT3G56140.1 | Symbols: | Protein of unknown function (DUF399
and DUF3411) | chr3:20829282-20832871 FORWARD LENGTH=2565
Length=2565
Score = 3812 bits (2064), Expect = 0.0
Identities = 2338/2467 (95%), Gaps = 32/2467 (1%)
Strand=Plus/Plus
Query 1 GCTGACGTGTACAAACGGAGctctcttctc--ttct--tctctGAGAGAATGAAACTTAC 56
|||||||||||||||||||||||||||||| ||| |||| |||||||||||| ||
Sbjct 79 GCTGACGTGTACAAACGGAGCTCTCTTCTCAGCTCTGGCCTCT--GAGAATGAAACTCAC 136
Query 57 CACAAATGATCTCTTCGCTTCTCAACCATTATTCCACTGCCCCTGCTCCT-CT--T-CC- 111
||| ||||||||||||||||||||||||||||| |||||||| ||||||| || | ||
Sbjct 137 CACGAATGATCTCTTCGCTTCTCAACCATTATTTCACTGCCCTTGCTCCTCCTCCTCCCG 196
Query 112 T-CTCGTCGCCGCCGTTTCCATGGCCTTCATCTTCCGATCAATCTCACTA-CTGAGAAGA 169
| |||| ||||| |||||| ||||||||||| |||||||||| ||||| | | |||||||
Sbjct 197 TCCTCGCCGCCGACGTTTCTATGGCCTTCATTTTCCGATCAACCTCACCAGC-GAGAAGA 255
Query 170 ATAACTT-ACTATCCATCGTTGCTCTTTCTGATTCCGATGTTCCATCCCGAACCGCCGTC 228
| || || |||||||| ||||||||||||||||||||| ||||||| ||||||||| ||
Sbjct 256 ACAA-TTCTCTATCCATTGTTGCTCTTTCTGATTCCGATCTTCCATCACGAACCGCCTTC 314
Query 229 TCTCGCCGCGCTTTTCTCCTGGCCCCGCCACTCCT-CTCCGTC-GCTGCTTCCCTGTTTC 286
||||||||||||||||| || || || ||||| || | | || ||||||||| ||||||
Sbjct 315 TCTCGCCGCGCTTTTCTACTCGCGCCACCACTTCTAGT-C-TCGGCTGCTTCCTTGTTTC 372
Query 287 TCAAGCCGTCTGTCTCTTTAGCCACCGAGGCGAGCTCGTCCGCTACAGTAACTTCGCCTG 346
|||| |||||||||||||||||| |||||| ||||||||||||||||||||| |||||||
Sbjct 373 TCAAACCGTCTGTCTCTTTAGCCTCCGAGGAGAGCTCGTCCGCTACAGTAACATCGCCTG 432
Query 347 CGGAATCAGCAGCTCCTCCTCCTCCTGCGACCGCCACTGCTCCATCGCCGCCGCCTGCAC 406
|||||||||||||||||||||||||| | | || || | || || |||||||| |||
Sbjct 433 CGGAATCAGCAGCTCCTCCTCCTCCT-C--CTGCGACCACAACACCGTCGCCGCCTCCAC 489
Query 407 CCGTGAATGAGGAAGAGACTATAACCTCGAGAATCTATGACGCGACGGCCATTGGTGAGC 466
|||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 490 CCGTGAATAAGGAAGAGACGATAACCTCGAGAATCTATGACGCGACGGCCATTGGTGAGC 549
Query 467 CGATGGCTATGGGAAAAGATAAGAAGAAGGTGTGGGAGAAGCTGATGAATGCCAGAGTTG 526
|||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||
Sbjct 550 CGATGGCTATGGGAAAAGATAAGAAGAAGGTGTGGGAGAAGCTGTTGAACGCGAGAGTTG 609
Query 527 TGTACCTCGGCGAGGCGGAGCAAGTTCCTACCAAAGACGACAAAGAGCTTGAACTCGAAA 586
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 610 TGTACCTCGGTGAGGCGGAGCAAGTGCCTACCAAAGACGACAAAGAGCTTGAACTCGAAA 669
Query 587 TCGTTAGAAACCTGAGGAAGAGATGCGTTGAGAACGAGCGTCAAATCTCTGTAGCACTAG 646
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 670 TCGTTAGAAACCTGAGGAAGAGATGCGTTGAGAGCGAGCGTCAAATCTCTGTAGCACTGG 729
Query 647 AAGCATTCCCTCTTGATTTGCAGGACCAGCTTAATCAATACATGGATAGGAGGATGGACG 706
||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct 730 AAGCATTCCCTCTCGATTTGCAGGATCAGCTTAATCAATACATGGATAAGAGGATGGACG 789
Query 707 GAGAGACATTGAAGTCTTATGTGACACATTGGCCTGCTCAACGTTGGCAAGAATATGAGC 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 790 GAGAGACATTGAAGTCTTATGTGACACATTGGCCTGCTCAACGTTGGCAAGAATATGAGC 849
Query 767 CTCTTTTAAGTTACTGTCGCGATAACTCTGTTAGACTAATTGCTTGTGGCACTCCTCTCA 826
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 850 CTCTTTTAAGTTATTGCCGCGATAACTCTGTTAGACTAATTGCTTGTGGCACTCCTCTCA 909
Query 827 AGGTTTTAAGAACTGTCCAAGCAGAAGGTATCCGTGGTCTTTCAAAATCTGAGCGTAAAT 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 910 AGGTTTTAAGAACTGTCCAAGCAGAAGGTATCCGTGGTCTTTCAAAATCTGAGCGTAAAT 969
Query 887 TATACACTCCCCCTGCTGGTTCTGGGTTTATTTCAGGATTTTCTTCCTTCTCACGTAGAT 946
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 970 TATACACTCCCCCTGCTGGTTCTGGGTTTATCTCAGGATTTTCTTCATTCTCACGTAGAT 1029
Query 947 CTACATTTGATATGAGTCTCCCAACACAGATTGTTCCGTTTGGACCAAGTTCTTATTTGT 1006
||||||| ||||||||||||||||||||||||||||| |||||||| ||||| |||||||
Sbjct 1030 CTACATTCGATATGAGTCTCCCAACACAGATTGTTCCTTTTGGACCGAGTTCATATTTGT 1089
Query 1007 CGGCACAGGCAAGAGTTGTTGAAGACCATACAATGTCACAAGTTATTTTACAAGCAGTAG 1066
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1090 CGGCACAAGCAAGAGTTGTTGAAGACCATACAATGTCACAAGTTATTTTACAAGCAGTAG 1149
Query 1067 CAGATGGAGGGGGTAGTGGTCTACTGTTAGTGGTAACAGGGGCGAGTCATGTTGAGTATG 1126
||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 1150 CAGATGGAGGGGGTACTGGTCTACTGTTAGTGGTGACAGGGGCAAGTCATGTTGAGTATG 1209
Query 1127 GCTCAAGAGGAACAGGTTTGCCAGCAAGGATCTCAAGGAAGTTTCCAAAGAAAAACCAAC 1186
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1210 GTTCAAGAGGAACAGGTTTGCCAGCAAGGATCTCAAGGAAGTTTCCAAAGAAAAACCAAG 1269
Query 1187 TTGTTGTATTACTTGATCCTGAAAGACAGTACTTGCGAAGAGAGGGCGAAACTCCAGTTG 1246
|||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1270 TTGTTGTATTACTTGACCCTGAAAGACAGTTCTTGCGAAGAGAGGGCGAAACTCCAGTTG 1329
Query 1247 CTGATTTCTTGTGGTATTCTGCAGCAAGACCCTGCAGTAGAAACTGCTTTGACCGAGCAG 1306
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1330 CTGATTTCTTGTGGTATTCTGCTGCAAGACCCTGCAGTAGAAACTGCTTTGACCGAGCAG 1389
Query 1307 AGATTGCTCGAGTAATGAATGCAGCTGGCAGGAGGCGAGATGCCCTTCCACCGGATATTC 1366
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 1390 AGATTGCTCGAGTAATGAATGCAGCTGGCAGGAGGCGAGATGCCCTTCCTCCCGATATTC 1449
Query 1367 AAAATGGATTAGACCTTGGTCTGGTGTCACCTGAGGTTCTGCAGAATCTCTTTGATTTGG 1426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1450 AAAATGGATTAGACCTTGGTCTGGTGTCACCTGAGGTTCTGCAGAATCTCTTTGATTTGG 1509
Query 1427 AGCAGTATCCTCTTATTTCTGAGCTTACTCAGCGGTTTCAGGGTTTCCGAGAAAGGTTGT 1486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1510 AGCAGTATCCTCTTATTTCTGAGCTTACTCAGCGGTTTCAGGGTTTCCGAGAAAGGTTGT 1569
Query 1487 TGGCAGATCCAAAATTCCTGAATAGATTAGCTATCGAAGAGGCTATATCAATAACAACTA 1546
||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||
Sbjct 1570 TGGCAGATCCAAAATTCCTGAATAGGTTAGCCATCGAAGAAGCTATATCAATAACAACTA 1629
Query 1547 CATTAATAGCACAATATGAGAAGCGGAGAGAGAATTTCTTTGAAGAAATCGACTATGTTA 1606
|| |||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||
Sbjct 1630 CACTAATAGCACAATATGAGAAGCGAAAAGAGAATTTCTTTGAAGAAATTGACTATGTTA 1689
Query 1607 TAACTGATACAGTGAGAGGATCAGTCGTTGATTTTTTCACAGTTTGGCTTCCTGCACCAA 1666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1690 TAACTGATACAGTGAGAGGATCAGTCGTTGATTTTTTCACAGTTTGGCTTCCTGCACCAA 1749
Query 1667 CTTTGTCTTTTCTTTCATATGCTGATGAGACCACTGGACCAGACAGCATAGACGCCCTGA 1726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1750 CTTTGTCTTTTCTTTCATATGCTGATGAGACCACTGGACCAGACAGCATAGACGCCCTGA 1809
Query 1727 GAGGCCTCCTAGGATCCATACCTGATAACGCATTTCAAAAAAGTCTTGCTGGAAGAGAGT 1786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1810 GAGGCCTCCTAGGATCCATACCTGATAACGCATTTCAAAAAAGTCTTGCTGGAAGAGAGT 1869
Query 1787 GGAACCTGAATCTTAGAATTGCTTCAGTTATTGTTGGTGGCTTGAAGCTTGCTGGTGTTG 1846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1870 GGAACCTGAATCTTAGAATTGCTTCAGTTATTGTTGGTGGCTTGAAGCTTGCTGGTGTTG 1929
Query 1847 GAGTTGTTTCCAGTTTTGCAGCTGTGGGAGCTTCAAATGCATTGAATGTAGTACGAAAGG 1906
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct 1930 GAGTTGTTTCCAGTTTTGCAGCTGTGGGAGCTTCAAATGCATTGAATATAGCACGAAAGG 1989
Query 1907 TCATTAGACCCGAGTTGGTTGTTTCTGAGAAACCTAAGAGGTCTCCTCTTCTGAAGACGG 1966
|||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1990 TCATTAAACCCGAGCTGGTTGTGGCTGAGAAACCTAAGAGGTCTCCTCTTCTGAAGACGG 2049
Query 1967 CAATGGTTTATGGAGGTTTTCTGGGAACATCTGCAAATCTTCGTTACCAGATAATTGCGG 2026
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2050 CAATGGTTTACGGAGGTTTTCTGGGAACATCTGCAAATCTTCGTTACCAGATAATTGCGG 2109
Query 2027 GATTAATAGAGCATCGCCTTTCTGATGAGCTTTCCTCTCAACCTCTACTTGTAAATGCTA 2086
||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||
Sbjct 2110 GATTAATAGAGCATCGCCTATCTGATGAGCTTTCTTCGCAACCTCTACTTGTAAATGCTA 2169
Query 2087 TTTCATTTGTTGTCAGGACCCTAAACTCATATTTTGGAACGCAGCAATGGATCGATCTTG 2146
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2170 TTTCATTTGTTGTCAGGACCCTAAACTCATATTTCGGAACGCAGCAATGGATCGATCTTG 2229
Query 2147 CACGCTCTACAGGTCTGCAAACTCAGAAAAGCATCCCAGCCTCTAAAGAAATTCCAGAGG 2206
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2230 CACGCTCTACGGGTCTGCAAACTCAGAAAAGCATCCCAGCCTCTAAAGAAATTTCAGAGG 2289
Query 2207 CTTTGGAAGAATCGACGGTGGAATGCGATACTACTACTGAAGAGGAAAGTATCGACAAGC 2266
||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2290 CTTTGGAAGAACCGACAGTGGAATGCGATACTACTACTGAAGAGGAAAGTATCGATAAGC 2349
Query 2267 TCAATAATCAATGATACTGGTGAGGCTACCCCACTAGTTATCAA--AATAGTTGTTTGCC 2324
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2350 TCAATAATCAATGATACTGGTGAGGCTACCCCACTAGTTATCAATTAATAGTTGTTTGCC 2409
Query 2325 ATA-A-GCTTTAGATCGTAGAAATGAGCATA-A-TAATTTCACAATTCTTAAGTTGTATG 2380
||| | |||||||||||||||||| |||||| | |||||||||| |||||||||||||||
Sbjct 2410 ATATAAGCTTTAGATCGTAGAAATTAGCATATAATAATTTCACATTTCTTAAGTTGTATG 2469
Query 2381 TTCGTATTTGTGCTTCTTGGCAAATAGTGATGGTTTCAATATAAATTTCTTGTCTTAAAC 2440
|||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct 2470 TTCGTACATGTGCTT---GGCAAATAGTGATGGTTTCAATATAAATTTGTTGTCTTAAAC 2526
Query 2441 TCACATT 2447
|||||||
Sbjct 2527 TCACATT 2533
> AT2G40400.1 | Symbols: | Protein of unknown function (DUF399
and DUF3411) | chr2:16869334-16872757 FORWARD LENGTH=2425
Length=2425
Score = 1940 bits (1050), Expect = 0.0
Identities = 1620/1891 (86%), Gaps = 55/1891 (3%)
Strand=Plus/Plus
Query 416 AGGAAGAGACTATAACCTCGAGAATCTATGACGCGAC-G-GCCATTGGTGAGCCGATGGC 473
|||||||| | ||||| || ||||||||||||||| | | | | ||||||||||||||||
Sbjct 376 AGGAAGAGGCGATAACTTCTAGAATCTATGACGCGTCTGTG-C-TTGGTGAGCCGATGGC 433
Query 474 T-ATGGGAAAAGATAAGAAGAAG-GTGTGGGAGAAGCTGA-TGAATGCCA-GAGTTGTGT 529
| |||| |||||||||||| || |||||||||||||| | ||||||| | || |||| |
Sbjct 434 TGTTGGG-AAAGATAAGAAG-AGAGTGTGGGAGAAGCT-ATTGAATGCGAGGA-TTGTCT 489
Query 530 ACCTCGGCGAGGCGGAGCAAGTTCCTACCAA-AGACGACAAAGAGCTTGAACTCGAAATC 588
| ||||| || || || ||||| |||| ||| ||||||||| | || || |||||||||
Sbjct 490 ATCTCGGAGAAGCAGAACAAGTGCCTA-CAAGAGACGACAAGGTTCTCGAGCTCGAAATC 548
Query 589 GTTAGAAACCTGAGGAAGAGATGCGTTGAGAACGAGCGTCAAATCTCTGTAGCACTAGAA 648
|| || || |||||||| |||| |||||| ||| ||||| | ||| ||||| | |||
Sbjct 549 GTGAGGAATTTGAGGAAGCGATGTATTGAGAGCGATCGTCAGTTATCTTTAGCATTGGAA 608
Query 649 GCATTCCCTCTTGATTTGCAGGACCAGCTT-AATCAATACATGGATAGGAGGATGGACGG 707
||||| ||||||||||||||||| ||| || || ||||||||||| | ||||||||| ||
Sbjct 609 GCATTTCCTCTTGATTTGCAGGAACAG-TTAAACCAATACATGGACAAGAGGATGGATGG 667
Query 708 AGAGACATTGAAGTCTTATGTGA-CACATTGGCCTGCT-CAACGTTGGCAAGAATATGAG 765
|||| ||||||||| ||||| | |||||||||| | | |||||||||||||| ||||||
Sbjct 668 AGAGGTATTGAAGTCGTATGT-ATCACATTGGCCAG-TCCAACGTTGGCAAGAGTATGAG 725
Query 766 CCTCTTTTAAGTTACTGTCGCGATAACTCTGTTAGACTAATTGCTTGTGGCACTCCTCTC 825
||||| ||||||||||| ||||||||| |||| ||| ||||||||||||||||| |||
Sbjct 726 CCTCTCTTAAGTTACTGCCGCGATAACGGAGTTAAACTCATTGCTTGTGGCACTCCGCTC 785
Query 826 AAGGTTTTAAGAACTGTCCAAGCAGAAGGTATCCGTGGTCTTTCAAAATCTGAGCGTAAA 885
||||||||||||||||||||||| || |||||||||||||| ||| | ||||||||||||
Sbjct 786 AAGGTTTTAAGAACTGTCCAAGCTGAGGGTATCCGTGGTCTATCAGAGTCTGAGCGTAAA 845
Query 886 TTATACACTCCCCCTGCTGGTTCTGGGTTTATTTCAGGATTTTCTTCCTTCTCACGTAGA 945
||||||||||| ||||| ||||| |||||||| ||||| ||| ||||||||||||||||
Sbjct 846 TTATACACTCCTCCTGCGGGTTCAGGGTTTATCTCAGGGTTTACTTCCTTCTCACGTAGT 905
Query 946 TCTACATTTGATATGAGT-CTCCCAACACAGATTGTTCCGTTTGGACCAAGTTCTTATTT 1004
||| || | |||||| | | | | |||||||||||||| |||||||| |||||||||||
Sbjct 906 TCTTCACTCAATATGAATCCACTC-ACACAGATTGTTCCATTTGGACCGAGTTCTTATTT 964
Query 1005 GTCGGCACAGGCAAGAGTTGTTGAAGACCATACAATGTCACAAGTTATTTTACAAGCAGT 1064
||||||||| || |||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct 965 GTCGGCACAAGCTAGAGTTGTTGAAGACCATACAATGTCTCAAGTTATTGTACAAGCAGT 1024
Query 1065 AGCAGATGGAGGGGGTAGTGGTCTACTGTTAGTGGTAACAGGGGCGAGTCATGTTGAGTA 1124
||||||||||| || | |||| | ||| ||||||| |||||||| | |||||||||||
Sbjct 1025 TGCAGATGGAGGTGGAACTGGTATGCTGGTAGTGGTGACAGGGGCAAACCATGTTGAGTA 1084
Query 1125 TGGCTCAAGAGGAACAGGTTTGCCAGCAAGGATCTCAAGGAAGTTTCCAAAGAAAAACCA 1184
||| ||||| |||||||| ||||| ||||||||||| |||||| |||| ||||||| ||
Sbjct 1085 TGGGTCAAGGGGAACAGGATTGCCGGCAAGGATCTCTAGGAAGATTCCGAAGAAAAGTCA 1144
Query 1185 ACTTGTTGTATTACTTGATCCTGAAAGACAGTACTTGC-GAAGAGAGGGCGAAACTCCAG 1243
||||||||| |||||||||||||||||||||| |||| ||| |||||| ||| ||||||
Sbjct 1145 ACTTGTTGTGTTACTTGATCCTGAAAGACAGTTTTTGCGGAA-AGAGGGTGAATCTCCAG 1203
Query 1244 TTGCTGATTTCTTGTGGTATTCTGCAGCAAGACCCTGCAGTAGAAACTGCTTTGACCGAG 1303
||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||
Sbjct 1204 TTGCTGATTTCTTGTGGTATTCTGCGGCCAGACCCTGCAGCAGAAACTGCTTTGACCGAG 1263
Query 1304 CAGAGATTGCTCGAGTAATGAATGCAGCTGGCAGGAGGCGAGATGCCCTTCCACC-GGAT 1362
|||| || ||||| ||||||||||| ||||| ||||| |||||||||||||| || ||
Sbjct 1264 CAGAAATCGCTCGGGTAATGAATGCGGCTGGTAGGAGACGAGATGCCCTTCC-CCAAGAC 1322
Query 1363 ATTCAAAATGGATTAGACCTTGGTCTGGTGTCACCTGAGGTTCTGCAGAATCTCTTTGAT 1422
|||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 1323 ATTCAAAAAGGATTAGACCTTGGTCTGGTGTCACCTGAGATTCTGCAGAATTTCTTTGAT 1382
Query 1423 TTGGAGCAGTATCCTCTTATTTCTGAGCTTACTCAGCGGTTTCAGGGTTTCCGAGAAAGG 1482
|||||||| |||||||||||||| |||||||| || ||||| ||||| ||||||||||||
Sbjct 1383 TTGGAGCAATATCCTCTTATTTCAGAGCTTACACAACGGTTCCAGGGATTCCGAGAAAGG 1442
Query 1483 TTGTTGGCAGATCCAAAATTCCTGAATAGATTAGCTATCGAAGAGGCTATATCAATAACA 1542
|||||||||||||| |||||| |||||||||||||||| ||||| |||||||||||||||
Sbjct 1443 TTGTTGGCAGATCCCAAATTCTTGAATAGATTAGCTATTGAAGAAGCTATATCAATAACA 1502
Query 1543 ACTACA-TTAATAGCACAATATGAGAAGCGGAGAGAGAATTTCTTTGAAGAAATCGACTA 1601
|| ||| || |||| |||||||||||||||| ||| ||||||||||||||| |||||||
Sbjct 1503 ACAACACTT-GTAGCTCAATATGAGAAGCGGAAAGAAAATTTCTTTGAAGAACTCGACTA 1561
Query 1602 TGTTATAACTGATA-CAGTGAGAGGATCAGTCGTTGATTTTTTCACAGTTTGGCTTCCTG 1660
||| || ||||||| | || |||| |||||| ||||||||||||||||||||||| ||||
Sbjct 1562 TGTGATCACTGATAGC-GTAAGAGCATCAGTTGTTGATTTTTTCACAGTTTGGCTCCCTG 1620
Query 1661 CACCAACTTTGTCTTTTCTTTCATATGCTGATGAGACCACTGGACCAGACAGCATAGACG 1720
||||||| ||||||||| | ||||||||||||||||| | ||| ||| |||||||||| |
Sbjct 1621 CACCAACCTTGTCTTTTATCTCATATGCTGATGAGACAATTGGGCCAAACAGCATAGATG 1680
Query 1721 CCCTGAGAGGCCTCCTAGGATCCATACCTGATAACGCATTTCAAAAAAGTCTTGCTGGA- 1779
|| | |||||||||||||| ||||||||||| || ||||||||||||||||| | ||||
Sbjct 1681 CCTTAAGAGGCCTCCTAGGGTCCATACCTGACAATGCATTTCAAAAAAGTCTAGGTGGAC 1740
Query 1780 AGAGAGTGGAAC-CTGAATCTTAGAATTGCTTCAGTTATTGTTGGTGGCTTGAAGCTTGC 1838
| ||||||| || |||| |||||| ||||||||||||||| | |||||||||||||||||
Sbjct 1741 A-AGAGTGG-ACTCTGAGTCTTAGGATTGCTTCAGTTATTATCGGTGGCTTGAAGCTTGC 1798
Query 1839 TGGTGTTGGAGTTGTTTCCAGTTTTGCAGCTGTGGGAGCTTCAAATGCATTGAATGTAGT 1898
||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||| | |
Sbjct 1799 TGGTGTTGGAGTTGTTTCCAGTTTTGCAGCTGTGGGATCTTCAAATGCTTTGTATGCAAT 1858
Query 1899 ACGAAAGGTCATTAGACCCGAGTTGGTTGTTTCTGAGAAACCTAAGAGGTCTCCTCTTCT 1958
|||||| |||||| ||| ||||||| |||| |||| || | |||||||||||| | ||
Sbjct 1859 ACGAAAATTCATTAAACCAGAGTTGGGTGTTGGTGAGCAAGCAAAGAGGTCTCCTATGCT 1918
Query 1959 GAAGACGGCAATGGTTTATGGAGGTTTTCTGGGAACATCTGCAAATCTTCGTTACCAGAT 2018
||||||||| | || |||||||||| ||||||||||||| | ||| | ||||| |||||
Sbjct 1919 GAAGACGGCCCTTGTGTATGGAGGTTATCTGGGAACATCTTCGAATATCCGTTATCAGAT 1978
Query 2019 AATTGC-GGGATTAATAGAGCATCGCCTTTCTGATGAGCTTTCCTCTCAACCTCTACTTG 2077
|||||| ||| ||||||||||||||| ||||||| |||||||| ||||||||||||||||
Sbjct 1979 AATTGCTGGG-TTAATAGAGCATCGCATTTCTGACGAGCTTTCTTCTCAACCTCTACTTG 2037
Query 2078 TAAA--TGCTATTTCATTTGTTGT-C-AGGACCCTAAACTCATATTTTGGAACGCAGCAA 2133
|||| || |||||||||||||| | || | | ||| ||| || |||||||| ||||||
Sbjct 2038 TAAACATG--ATTTCATTTGTTGTTCGAGTAGC-TAA-CTCCTACTTTGGAACTCAGCAA 2093
Query 2134 TGGATCGATCTTGCACGCTCTACAGGTCTGCAAACTCAGAAAAGCATCCCAGCCTCTAAA 2193
||||| |||||||| |||||||| |||||||||||||||||||| || || | || ||
Sbjct 2094 TGGATTGATCTTGCGCGCTCTACGGGTCTGCAAACTCAGAAAAGTGTCACAACTTCCAAC 2153
Query 2194 GAAATTCCAGAGGCTTTG-GAAG--AATCGACGGTGGAATGC-GATACTACTACTGAAGA 2249
|||| || |||| || | || | |||| || ||||||| | | ||| | ||||||||
Sbjct 2154 CAAATCCCCGAGG-TT-GCGA-GCCAATCCACAGTGGAATACAG-TAC-A--ACTGAAGA 2206
Query 2250 GGAAAGTATCGACAAGCTCAATAATCAATGA 2280
|| |||||| || | || || |||||||||
Sbjct 2207 GGCAAGTATGGATGATCTTAAGAATCAATGA 2237
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 121585719990
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5