BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486108
Length=1519
Score E
Sequences producing significant alignments: (Bits) Value
AT3G56680.1 | Symbols: | Single-stranded nucleic acid binding ... 2200 0.0
AT5G33400.1 | Symbols: | pseudogene, hypothetical protein | ch... 819 0.0
AT5G33406.1 | Symbols: | hAT dimerisation domain-containing pr... 457 2e-127
AT2G40960.1 | Symbols: | Single-stranded nucleic acid binding ... 448 1e-124
AT1G43886.1 | Symbols: | transposable element gene | chr1:1663... 163 4e-39
> AT3G56680.1 | Symbols: | Single-stranded nucleic acid binding
R3H protein | chr3:20991280-20993677 FORWARD LENGTH=1550
Length=1550
Score = 2200 bits (1191), Expect = 0.0
Identities = 1437/1549 (93%), Gaps = 43/1549 (3%)
Strand=Plus/Plus
Query 1 AAAGAAGGAAAAAATATAAAGTTTCCTTTCCCTCTCG-T--TT-GCTTTGGCTTCCCgag 56
||||||||||||||||||||||||||||||||||||| | || |||||| |||||||||
Sbjct 1 AAAGAAGGAAAAAATATAAAGTTTCCTTTCCCTCTCGTTCGTTGGCTTTGCCTTCCCGAG 60
Query 57 agagagagaTAAGATTTGG-TTAGCATTCCTCTTGTCTCTCGCCGCTCTCAATATGCTCC 115
||||| ||||||||||||| || ||||||||||| ||||||||||||||||||||||| |
Sbjct 61 AGAGAAAGATAAGATTTGGTTTTGCATTCCTCTTCTCTCTCGCCGCTCTCAATATGCTTC 120
Query 116 GATTTCGATTCTCATCTTCCTCTTGATTTGTCTTCTTCTTCTCTTTGCTGC-G-GAG--- 170
|||||| |||||| ||||||||||||||| | |||||||||||||||||| | |||
Sbjct 121 GATTTCTATTCTCCTCTTCCTCTTGATTT-T-GTCTTCTTCTCTTTGCTGCGGAGAGATT 178
Query 171 -AG-------A----TTTAAGCAAGAGACGCGGCGAGGAAGCTATCCATAACTCTCTAGA 218
|| | ||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 179 AAGAAACCCAAGGGTTTTAAGCAAGAGACGCGGCGAGGAAGCTATCCAGAACTCTCT-GA 237
Query 219 AACATCCATTCCCTTTTCTCATGGACGCAGCGTTGCCGGAAACCGCCGTCGGT-ACCGGT 277
|||||||||||| |||||||||||||| || |||||||||||| ||||| ||| ||||||
Sbjct 238 AACATCCATTCCTTTTTCTCATGGACGTAGTGTTGCCGGAAACTGCCGT-GGTAACCGGT 296
Query 278 GGTAT-GGTTATCGGAGA-TAGTGGATTGAATGTAGATCCTTTTCTGGTTGAGGCTTTGC 335
||| | |||||||||||| || |||||| ||||| ||||||||||| |||||||| ||||
Sbjct 297 GGT-TCGGTTATCGGAGATTA-TGGATTTAATGTGGATCCTTTTCTCGTTGAGGCGTTGC 354
Query 336 AGAACTCTCGCCATCGTCTCACGATTTTGCGGATGGAACTTGATGTTCAAAGGTTGTTGC 395
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 355 ACAACTCTCGCCATCGTCTCACGATTTTGCGGATGGAACTTGATGTTCAAAGGTTGTTGC 414
Query 396 AGAACCCTGAACAGCAGCAGTTTGAGTTCCAGCATTTTCCTACTTCGTATCTTCGTCTTG 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 415 AGAACCCTGAACAGCAGCAGTTTGAGTTCCAGCATTTTCCTACTTCGTATCTTCGTCTTG 474
Query 456 CAGCCCATCGTGTTGCTAACCATTATGGACTAGCTACAGCGGTTCAGGAAAGTGGTGCAG 515
|||||||||||||||||||||||||||| ||||||||||| || || || |||||||| |
Sbjct 475 CAGCCCATCGTGTTGCTAACCATTATGGGCTAGCTACAGCTGTCCAAGAGAGTGGTGCTG 534
Query 516 ATGGAAATGAAAACAGAATCCTTGTGACAAAAACTACAGAGAGCAAATTCCCTGCTCTTC 575
|||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||
Sbjct 535 ATGGAAATGAAAACAGAATCCTTGTGACGAAAACTACAGAGAGCAAATTTCCTGCTGTTC 594
Query 576 GGTTGTCTGAAATCCCGGTGGCTAAACAATCAGAAAATGGTAAGTTTGAGAGCATGAAAG 635
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 595 GGTTGTCTGAAATCCCGGTGGCTAAACAATCAGAAAATGGTAAGTTTGAGAGCAGGAAAG 654
Query 636 TTTCCATCAAGACTCGACCTTCTAAAGGATCTGGATATGGCGCTGGTGAACTGGACAAGA 695
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 655 TTTCCATCAAGACTCGACCTTCTAAAGGATCTGGATATGGCGCTGGTGATCTGGAAAAGA 714
Query 696 AACGTGGTCCTCTTAGAAGTGTTGAAGAGAGGAAAGAAGAGTATGA-AAGGGCTCGAGAA 754
| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct 715 ATCGTGGTCCTCTTAGAAGTGTTGAAGAGAGGAAAGAAGAGTATGACAAGG-CTCGAGAA 773
Query 755 CGCATATTTAGTGGTCTTACAGGTCTTAATTGTGATGACTCTTCATCTGAAACTCAGGTG 814
|||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct 774 CGCATATTCAGTGGTCTTACTGGTCTTAGTTGTGATGACTCTTCATCTGAAACTCAGGTG 833
Query 815 TATGGGAGGAATGCAAGTCTTCTTAGCAGAGATGACAAGCAAGTTTCTAAGAATGCTTAC 874
|||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 834 TATGAGAGGAATGCAAGTCTT---AGCAGAGATGACAAGCAAGTATCTAAGAATGCTTAC 890
Query 875 GTTGAGGGCAAGAAGAACTTAAGCCTCAGGGAAAGCGGTCCAACATCTCGTGTTGCAATA 934
||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 891 GTTGAGGTCAAGAAGAACTTAAGCATCAGGGAAAGTGGTCCAACATCTCGTGTTGCAATA 950
Query 935 TTTAGAGACAGGGAGAAAGATCGGTTTGACCCTGATTATGACCGCAGAAACGAAAGGTAT 994
||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 951 TTTAGAGACAGAGAGAAAGATCGGTTTGACCCTGATTATGACCGCAGACACCAAAGGTAC 1010
Query 995 ATTAGGAGCCTTCCGGTGAATCAGAACTTCAATTTACCACCCTTCAACATTCAGCAAATA 1054
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1011 ATTAGGAGCCTTCCGGTGAATCAGAACTTCAATCTACCACCCTTCAACATTCAGCAAATA 1070
Query 1055 CCGACACCATACTATGAAATGGGATTCACTGGATATAACCAAATTCCAAG-CACTCCTGC 1113
|||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 1071 CCGACACCATACTACGAAATGGGATTCACTGGATATAACCAAATTCCAAGTC-CTCCTGC 1129
Query 1114 TCCTCTTGGCTTCGGGCCACCTCCAAGCTCTATCATGAGTCCCTATGGCAGCACAATGGA 1173
||||||||||||||| |||| ||| ||||| ||||||||||||||||||| |||||||||
Sbjct 1130 TCCTCTTGGCTTCGGACCACATCCTAGCTCAATCATGAGTCCCTATGGCACCACAATGGA 1189
Query 1174 TGCAATGTATATGCATTGGCCTAATACAGCTATGATGTATGCTCATCCGTATGAGCAGTT 1233
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1190 TGCAATGTATATGCATTGGCCTAATGCAGCTATGATGTATGCTCATCCGTATGAGCAGTT 1249
Query 1234 TAGGAATGGCTCTCTTCAGGCACAGTTCGTTCAACAACCCTTGAGCTTCGACTGTATGCA 1293
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1250 CAGGAATGGCTCTCTTCAGGCACAGTTCGTTCAACAACCCTTGAGCTTCGACTACATGCA 1309
Query 1294 GAACCGCTAGGTGCTTGTCTCGTTGTCAATCTTTATCTCTGTTTACCAGTTTTCTT-GTA 1352
||||||||||||||||| ||| ||||| |||||||||||||||||||| |||| || |||
Sbjct 1310 GAACCGCTAGGTGCTTGCCTCTTTGTCGATCTTTATCTCTGTTTACCATTTTTTTTTGTA 1369
Query 1353 GAAC-TAGGAGCTGTTGTAATGGAAATTTTGGAGTTGTAATGTCAAATTTCAGAATGAAG 1411
|||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1370 GAACCTAGGAACTGTTGTAATGGAAATTTTGGAGTTGTAATGTCAAAATTCAGAATGAAG 1429
Query 1412 ATACCTTTTGTTCCTTTTACACTTATCAGATTCTGTCTGTTATTGATA-CCAATGAACTA 1470
| ||||||||||||||||||| |||||||||||||||| |||| || | |||||||||||
Sbjct 1430 AGACCTTTTGTTCCTTTTACAATTATCAGATTCTGTCTATTATGGAAAACCAATGAACTA 1489
Query 1471 CTTTTGTGGGTCAAATCATCATCGAAATTCTCTGTTTTGAACTGAATGT 1519
| | |||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 1490 CCT--GTGGGTCAAATCTTCATCGAAATTCTCTGTTTTGAATTGAATGT 1536
> AT5G33400.1 | Symbols: | pseudogene, hypothetical protein |
chr5:12682232-12682927 REVERSE LENGTH=696
Length=696
Score = 819 bits (443), Expect = 0.0
Identities = 554/605 (92%), Gaps = 17/605 (3%)
Strand=Plus/Plus
Query 360 TTTTGCGGATGGAACTTGATGTTCAAAGGTTGTTGCAGAACCCTGAACAGCAGCAGTTTG 419
||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 93 TTTTGAGGATGGAAATTGATGTTCAAAGGTTGTTGTAGAACCCTGAACAGCAGCAGTTTG 152
Query 420 AGTTCCAGCATTTTCCTACTTCGTATCTTCGTCTTGCAGCCCATCGTGTTGCTAACCATT 479
|||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||
Sbjct 153 AGTTCCAGCATTTTCCTATTTCGTATCTTCGTCTTGCAGCTCATCGCGTTGCTAACCATT 212
Query 480 ATGGACTAGCTACAGCGGTTCAGGAAAGTGGTGCAGATGGAAATGAAAACAGAATCCTTG 539
|||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 213 ATGGGTTAGCTACAGCGGTTCAAGAGAGTGGTGCAGATGGAAATGAAAACAGAATCCTTG 272
Query 540 TGACAAAAACTACAGAGAGCAAATTCCCTGCTCTTCGGTTGTCTGAAATCCCGGTGGCTA 599
||| | || | | |||||||||||||||||| |||| ||||||||||| ||||||||||
Sbjct 273 TGA-ACAA-C-A--GAGAGCAAATTCCCTGCTATTCGATTGTCTGAAATACCGGTGGCTA 327
Query 600 AACAATCAGAAAATGGTAAGTTTGAGAGCATGAAAGTTTCCATCAAGACTCGACCTTCTA 659
|||||||||| ||||| |||| ||| | | |||||||||||||||||||||||||||||
Sbjct 328 AACAATCAGAGAATGGCAAGTCAGAGTGTACGAAAGTTTCCATCAAGACTCGACCTTCTA 387
Query 660 AAGGATCTGGATATGGCGCTGGTGAACTGGACAAGAAACGTGGTCCTCTTAGAAGTGTTG 719
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||
Sbjct 388 AAGGATCTGGATATGGCGCTCGTGAACAGGACAAGAAACGTGGTCCTCTTAGAAGCGTTG 447
Query 720 AAGAGAGGAAAGAAGAGTATGAAAGGGCTCGAGAACGCATATTTAGTGGTCTTACAGGTC 779
|||||||||||||| ||||||| ||||||||||||||||||||||||||||||| | |
Sbjct 448 AAGAGAGGAAAGAATAGTATGACAGGGCTCGAGAACGCATATTTAGTGGTCTTA-A--T- 503
Query 780 TTAATTGTGATGACTCTTCATCTGAAACTCAGGTGTATGGGAGGAATGCAAGTCTTCTTA 839
| |||||||||||||||||||||||||||||||| ||||||||| ||||||| |
Sbjct 504 T-----GTGATGACTCTTCATCTGAAACTCAGGTGTATAGGAGGAATGTAAGTCTT---A 555
Query 840 GCAGAGATGACAAGCAAGTTTCTAAGAATGCTTACGTTGAGGGCAAGAAGAACTTAAGCC 899
||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||
Sbjct 556 GCAGAGATGACAAGCAAGTATCTAAGAATGCTTGCGTTGAGGTCAAGAAGAACTTAAGCC 615
Query 900 TCAGGGAAAGCGGTCCAACATCTCGTGTTGCAATATTTAGAGACAGGGAGAAAGATCGGT 959
||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 616 TCAGGGAAAATGGTCCAACATCTCGTGTTGCAATATTTAGAGACAGAGAGAAAGATCGGT 675
Query 960 TTGAC 964
|||||
Sbjct 676 TTGAC 680
> AT5G33406.1 | Symbols: | hAT dimerisation domain-containing
protein / transposase-related | chr5:12676055-12678403 REVERSE
LENGTH=1601
Length=1601
Score = 457 bits (247), Expect = 2e-127
Identities = 324/360 (90%), Gaps = 9/360 (3%)
Strand=Plus/Plus
Query 1077 GATTC-ACTGGATATAACCAAATTCCAAGCACTCCTGCTCCTCTTGGCTTCGGGCCACCT 1135
||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct 1246 GATTCTGCTGGATATAACCAAATTCCAAGTATTCCTGCTCCTCTTGGCTTCGGGCCACCT 1305
Query 1136 CCAAGCTCTATCATGAGTCCCTATGGCAGC-ACAATGGATGCAATGTATATGCATTGGCC 1194
|||||||||| ||||||||||||||||| | ||||||||||||||||||||||||| |||
Sbjct 1306 CCAAGCTCTACCATGAGTCCCTATGGCA-CTACAATGGATGCAATGTATATGCATTTGCC 1364
Query 1195 TAATACAGCTATGATGTATGCTCATCCGTATGAGCAGTTTAGGAATGGCTCTCTTCAGGC 1254
|||| |||| ||||||||||||||||| ||||||||||| || |||||| ||||||||||
Sbjct 1365 TAATGCAGCCATGATGTATGCTCATCCCTATGAGCAGTTGAGAAATGGCCCTCTTCAGGC 1424
Query 1255 ACAGTTCGTTCAACAACCCTTGAGCTTCGACTGTATGCAGAACCGCTAGGTGCTTGTCTC 1314
|||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||
Sbjct 1425 ACAGTTCGTTCAACAACCCTTGAGCTTCGACTAC-TGCAGAAACGCTAGGTGCTCGTCTC 1483
Query 1315 GTTGTCAATCTTTATCTCTGTTTACCAGTTTTCTT-GTAGAAC-TAGGAGCTGTTGTAAT 1372
||||||||||| ||||| | |||| |||| || ||||||| ||||| ||||||||||
Sbjct 1484 TTTGTCAATCTTCCTCTCTCTATACCTTTTTTTTTTGTAGAACCTAGGAACTGTTGTAAT 1543
Query 1373 GGAAATTTTGGAG-TTGTAATGTCAAATTTCAGAATGAAGATACCTTTTGTTCCTTTTAC 1431
|||| |||||| | || |||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 1544 GGAA-TTTTGGGGCTT-TAATGTCAAAATTCAGGATGAAGATACCTTTTGTTCCTTTTAC 1601
> AT2G40960.1 | Symbols: | Single-stranded nucleic acid binding
R3H protein | chr2:17095522-17097454 FORWARD LENGTH=1257
Length=1257
Score = 448 bits (242), Expect = 1e-124
Identities = 625/803 (78%), Gaps = 54/803 (7%)
Strand=Plus/Plus
Query 299 GGATTGAATGTAGATCCTTTTCTGGTTGAGGCT-TTGCAGAACTCTCGCCATCGTCTCAC 357
||||| ||||| ||||||||| |||| |||||| || || ||| |||| |||||||| ||
Sbjct 167 GGATTCAATGTGGATCCTTTTTTGGTCGAGGCTCTT-CAAAACCCTCGACATCGTCTAAC 225
Query 358 GATTTTGCGGATGGAACTTGATGTTCAAAGGTTGTTGCAGAACCCTGAACAGCAGCAGTT 417
||||||||||||||||||||||||||| ||||| ||||||| |||||| |||||||| ||
Sbjct 226 GATTTTGCGGATGGAACTTGATGTTCAGAGGTTCTTGCAGAGCCCTGATCAGCAGCAATT 285
Query 418 TGAGTTCCAGCATTTTCCTACTTCGTATCTTCGTCTTGCAGCCCATCGTGTTGCTAACCA 477
|||||||||||||| ||||| || || || ||| |||| || |||||||||||||| ||
Sbjct 286 CGAGTTCCAGCATTTCCCTACATCATACCTCCGTTTTGCGGCTCATCGTGTTGCTAATCA 345
Query 478 TTATGGACTAGCTACAGCGGTTC-AGGAAAGTGGTGCAGATGGAAATGAAAACAGAATCC 536
||||||||| |||| | |||| || | ||||||||||||| ||||| | ||||||
Sbjct 346 CTATGGACTAATTACATCAGTTCGAG-ATGGTGGTGCAGATGGTAATGAGAGCAGAATTG 404
Query 537 TTGTGACAAAAACTACAGAGAGCAAATTCCCTGCT-CTTCGGTTGTCTGAAATCCCGGTG 595
| ||||| ||| ||| || |||| ||| |||||| || || | ||||||||||| |||
Sbjct 405 TCGTGACTAAATCTAGTGATAGCAGATTTCCTGCTGCT-CGACTATCTGAAATCCCTGTG 463
Query 596 GCTAAACAATCAGAAAATGGTAAGTTTGAG-AGCATGAAAGTT-TCCATCAAGACTCGAC 653
||||| ||||||| ||| ||||||||| | ||||||||| | || ||| | |||
Sbjct 464 ---AAACAGTCAGAAACTGGCAAGTTTGAGCAT-ATGAAAGTTGTT-ATAAAGCCAAGAC 518
Query 654 CTTCTAAAGGATCTGGATATGGC-GCTGGTGAACTGGACAAGAAACGTGGTCCTCTTAGA 712
|| |||||||||||||| |||| | || ||||||| | ||| |||||| ||| | |
Sbjct 519 CTACTAAAGGATCTGGA-ATGGAAGGTGATGAACTG-A-AAG----GTGGTCTTCTGAAA 571
Query 713 AGTGTTGAAGAGAGGAAAGAAGAGTATGAAAGGGCTCGAGAACGCATATTTAGTGGTCTT 772
||||||||||||||||||||||| || || |||||||||| ||||||||||| ||||||
Sbjct 572 AGTGTTGAAGAGAGGAAAGAAGATTACGACAGGGCTCGAGCACGCATATTTAACGGTCTT 631
Query 773 ACAGGTC-TTAATTGTGATGACTCTTCATCTGAAACTCAGG-T-GTATGGGAGGAAT-GC 828
| | || ||||| | || ||||||||||||||| | | | | ||| | ||| |
Sbjct 632 GT-GAACATTGATTGTAACGATTCTTCATCTGAAACTAATCCTTGGA-GGGTG-AATTGT 688
Query 829 AAGTCTTCTTAGCAGAGATGACAAGCAAGT-TTCTAAGAATGCTTACGTTGAGGGCA-AG 886
| || | || ||||||||||| || ||||| || ||||||| | | | || | || |
Sbjct 689 A-GT-T-CT-AGCAGAGATGAAAATCAAGTGTTG-AAGAATGGTAATATCGAAG-CAGAC 742
Query 887 AAGAACT-TAAGC-CTCAGGGAA-AGCGGTCCAACATCTCGTGTTGCAATATTT-AGAGA 942
|||||| || | || ||| || ||| ||| |||||||| ||||||| | | |||||
Sbjct 743 AAGAACAATAT-CTCT-AGG-AAGAGCAATCCTGCATCTCGTATTGCAAT-TCTCAGAGA 798
Query 943 CAGGGAGAAAGATCGGTTTGACCCTGATTATGACCGCAGAAACGAAAGGTATATTAGGAG 1002
||| ||||||||||| | ||||||||| ||||||||||| || | ||||| ||||| |
Sbjct 799 CAGAGAGAAAGATCGATATGACCCTGACTATGACCGCAGCAATTACAGGTACATTAGTAA 858
Query 1003 CCTTCCGGT-GAATCAGAACTTCAATT--TACCACCCTTCAACATTCAG-CAAATACCGA 1058
||| || || || ||| || || | | | ||| ||||||||||||| ||| | ||
Sbjct 859 CCTCCCAGTCGA-TCAAAATTT-A-TGCGTGGCACACTTCAACATTCAGACAA-TGGGGA 914
Query 1059 CACCA-TACTATGAAATGGGATT 1080
||||| | |||||| ||||||||
Sbjct 915 CACCAAT-CTATGATATGGGATT 936
> AT1G43886.1 | Symbols: | transposable element gene | chr1:16638997-16645265
REVERSE LENGTH=6269
Length=6269
Score = 163 bits (88), Expect = 4e-39
Identities = 137/160 (86%), Gaps = 5/160 (3%)
Strand=Plus/Plus
Query 991 GTATATTAGGAGCCTTCCGGTGAATCAGAACTTCAATT-TACCACCCTTCAACATTCAGC 1049
|||||||| ||| ||||||||||||| |||||| ||| ||||||| ||||| ||| |||
Sbjct 2994 GTATATTAATAGCATTCCGGTGAATCATAACTTC-ATTCTACCACCATTCAAGATTTAGC 3052
Query 1050 AAATACCGACACCATACTATGAAATGGGATTCACTGGATATAACCAAATTCCAAGCACTC 1109
|||||| ||||| | |||| |||||| |||||| ||||||||||||||||||||||||||
Sbjct 3053 AAATACAGACACTA-ACTACGAAATGAGATTCATTGGATATAACCAAATTCCAAGCACTC 3111
Query 1110 CT-GCTCCTCTTGGCTTCGGGCCACCTCCAAGCTCTATCA 1148
|| | |||||||||||| ||| ||| | ||||||| |||
Sbjct 3112 CTAG-TCCTCTTGGCTTTGGGACACTTTTAAGCTCTGTCA 3150
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 74949413685
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5