BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486115
Length=1813
Score E
Sequences producing significant alignments: (Bits) Value
AT3G56760.1 | Symbols: | Protein kinase superfamily protein | ... 3013 0.0
AT2G41140.1 | Symbols: CRK1, ATCRK1, ATCBK3 | CDPK-related kina... 1801 0.0
AT3G19100.1 | Symbols: | Protein kinase superfamily protein | ... 379 5e-104
> AT3G56760.1 | Symbols: | Protein kinase superfamily protein
| chr3:21020558-21023756 REVERSE LENGTH=1837
Length=1837
Score = 3013 bits (1631), Expect = 0.0
Identities = 1757/1818 (97%), Gaps = 7/1818 (0%)
Strand=Plus/Plus
Query 1 ATGGGGCTGTGTCATGGGAAACCTATCGAACAGCAATCGAAGAATCTCCAAATCTCCAAT 60
|||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 1 ATGGGGCTGTGTCATGGGAAACCTATCGAACAACAATCGAAGAATCTCCCAATCTCCAAT 60
Query 61 GAAATCGAAGAGTCACCTAAGAATTCATCTCAGAAAGCGAAATCTTCAGGCTTTCCGTTT 120
|||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 61 GAAATCGAAGAGACACCTAAGAATTCATCTCAGAAGGCGAAATCTTCAGGCTTTCCGTTT 120
Query 121 TATAGTCCAAGTCCATTACCTAGTCTCTTCAAAACCTCACCAGCTGTGTCATCCTCGAGC 180
||||||||||| || |||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 121 TATAGTCCAAGCCCTTTACCTAGTCTCTTCAAAACCTCACCTGCTGTGTCATCCTCCAGC 180
Query 181 GTGAGCTCCACGCCACTTCGTATCTTCAAGCGACCTTTCCCACCTCCCTCACCAGCTAAG 240
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct 181 GTGAGCTCCACGCCACTTCGTATCTTTAAGCGACCTTTCCCACCTCCATCACCAGCTAAG 240
Query 241 CATATACGAGCTCTCCTCGCGCGTCGTCACGGTTTTGTTAAGCCCAATGAAGCTTCGATC 300
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 241 CATATACGAGCTCTCCTCGCGCGTCGTCACGGTTCTGTTAAGCCCAATGAAGCTTCGATC 300
Query 301 CCTGAAGGTAGTGAGTGTGAGGTTGGCCTT-GACAAGAAATTTGGGTTCTCTAAGCAGTT 359
|||||||||||||| ||||||||||| ||| |||||||||||||| ||||||||||||||
Sbjct 301 CCTGAAGGTAGTGAATGTGAGGTTGG-CTTGGACAAGAAATTTGGTTTCTCTAAGCAGTT 359
Query 360 TGCTTCACACTACGAGATTGATGGTGAGGTGGGTCGAGGGCATTTTGGGTATACTTGCTC 419
||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 360 TGCTTCACACTACGAGATTGACGGTGAGGTGGGTCGAGGGCATTTTGGTTATACTTGCTC 419
Query 420 TGCTAAGGGGAAAAAAGGTAGCTTGAAAGGTCAAGATGTGGCTGTCAAAGTTATTCCCAA 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 TGCTAAGGGGAAAAAAGGTAGCTTGAAAGGTCAAGATGTGGCTGTCAAAGTTATTCCCAA 479
Query 480 ATCCAAGATGACTACGGCAATTGCAATTGAGGATGTTAGAAGAGAAGTGAAGATATTGCG 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 ATCCAAGATGACTACGGCAATTGCAATTGAGGATGTTAGAAGAGAAGTGAAGATATTGCG 539
Query 540 GGCTTTGACTGGTCACAAGAACCTAGTCCAGTTCTATGACGCCTTCGAAGATGATGAAAA 599
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 GGCTTTAACTGGTCACAAGAACCTAGTCCAGTTCTATGACGCCTTCGAAGATGATGAAAA 599
Query 600 TGTTTACATTGTGATGGAGTTATGCCAAGGCGGTGAACTTTTGGACAAGATACTTCAAAG 659
|||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 600 TGTTTACATTGTCATGGAGTTATGCCAAGGCGGTGAACTCTTGGACAAAATACTTCAAAG 659
Query 660 GGGAGGCAAATACTCAGAAGTAGATGCTAAAAAAGTAATGGTTCAGATTCTTAGTGTAGT 719
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 660 GGGAGGCAAATACTCAGAAGTAGATGCTAAAAAAGTAATGATTCAGATTCTTAGTGTAGT 719
Query 720 AGCCTACTGTCATCTTCAAGGCGTGGTTCATCGTGACCTCAAACCAGAGAATTTTCTCTT 779
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 720 AGCCTACTGTCATCTTCAAGGCGTGGTTCACCGTGACCTCAAACCTGAGAATTTTCTCTT 779
Query 780 CACTACAAAGGATGAGTCTTCTCCTCTGAAAGCCATTGATTTTGGTCTCTCTGACTATGT 839
||| ||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||
Sbjct 780 CACCACAAAGGATGAGTCTTCCCCTTTGAAAGCCATTGATTTTGGTCTCTCCGACTATGT 839
Query 840 CAGGCCAGATGAGAGGTTGAATGACATTGTAGGAAGTGCTTATTACGTGGCCCCTGAAGT 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 840 CAGGCCAGATGAGAGGTTGAATGACATTGTAGGAAGTGCTTATTACGTGGCCCCTGAAGT 899
Query 900 TTTACACCGTACATATGGAACTGAGGCAGATATGTGGAGTATTGGAGTGATTGCTTATAT 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 TTTACACCGTACATATGGAACTGAGGCAGATATGTGGAGTATTGGAGTGATTGCTTATAT 959
Query 960 ACTTCTCTGTGGTAGCCGGCCATTTTGGGCCCGTTCTGAATCTGGAATCTTCCGAGCTGT 1019
||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 960 ACTACTCTGTGGTAGCCGGCCCTTTTGGGCCCGTTCTGAATCTGGAATCTTTAGAGCTGT 1019
Query 1020 TCTTAAAGCAGAACCCAATTTCGAAGAAGCTCCTTGGCCATCTATTTCACCTGACGCTGT 1079
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1020 TCTTAAAGCAGAACCCAATTTCGAAGAAGCTCCTTGGCCATCTCTTTCACCTGACGCTGT 1079
Query 1080 AGATTTTGTGAAACGTTTGTTAAATAAAGATTACCGTAAGAGACTAACTGCTGCACAGGC 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1080 AGATTTTGTGAAACGTTTGTTAAATAAAGATTACCGTAAGAGACTAACTGCTGCACAGGC 1139
Query 1140 TTTGTGCCATCCTTGGCTTGTTGGCTCGCATGAATTAAAGATACCATCTGATATGATCAT 1199
||| |||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 1140 TTTATGCCATCCGTGGCTGGTTGGCTCACATGAATTAAAGATACCATCTGATATGATCAT 1199
Query 1200 TTACAAGCTTGTAAAAGTATACATAATGTCGTCGTCTTTGAGAAAATCGGCTTTAGCGGC 1259
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1200 TTACAAGCTCGTAAAAGTATACATAATGTCGTCTTCTTTGAGAAAATCGGCTTTAGCGGC 1259
Query 1260 TCTTGCCAAAACTTTAACAGTACCGCAGCTGACTTATTTGCAAGAGCAGTTTAATCTGTT 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1260 TCTTGCCAAAACTTTAACAGTACCGCAGCTGACTTATTTGCAAGAGCAGTTTAATCTGTT 1319
Query 1320 AGGACCGAGCAAAAACGGATATATCTCGATGCAGAATTACAAAACAGCTATCTTGAAGAG 1379
|||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 1320 AGGACCAAGCAAAAACGGATATATCTCGATGCAGAATTATAAAACAGCAATCTTGAAGAG 1379
Query 1380 CTCCACAGAAGCTACAAAGGATTCACGAGTCTTGGATTTTGTACACATGATTAGTTGTCT 1439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1380 CTCCACAGAAGCTACAAAGGATTCACGAGTCTTGGATTTTGTACACATGATTAGTTGTCT 1439
Query 1440 TCAGTACAAGAAACTAGACTTTGAAGAGTTTTGCGCTTCAGCTTTAAGTGTTTATCAGCT 1499
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1440 TCAGTATAAGAAACTAGACTTTGAAGAGTTTTGCGCTTCAGCTTTAAGTGTATATCAGCT 1499
Query 1500 AGAAGCAATGGAAACTTGGGAGCAACATGCACGCCATGCATATGAGTTGTTTGAGAAGGA 1559
|||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 1500 AGAAGCAATGGAGACTTGGGAGCAACATGCACGCCGTGCATATGAGTTGTATGAGAAGGA 1559
Query 1560 TGGGAACAGAGTCATTATGATCGAAGAACTTGCCACGGAACTCGGACTCGGTCCATCGGT 1619
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1560 TGGGAACAGAGTCATCATGATCGAAGAACTTGCCACGGAACTCGGACTAGGTCCATCGGT 1619
Query 1620 GCCTGTTCAGGTTGTTCTTCAAGATTGGATAAGACATTCTGATGGGAAGCTAAGTTTCTT 1679
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1620 GCCTGTTCATGTTGTTCTTCAAGATTGGATAAGACATTCTGATGGGAAGCTAAGTTTCTT 1679
Query 1680 GGGTTTTGTCAGACTCTTACACGGCGTGTCCTCTAGAACATTGCAGAAAGCGTAGAT-A- 1737
||||||||||||||||||||||||||| |||||| | ||||||||||||||||||| |
Sbjct 1680 GGGTTTTGTCAGACTCTTACACGGCGTCTCCTCTCGTACATTGCAGAAAGCGTAGAAGAG 1739
Query 1738 A-TTAGATTAAAGATTTGAAAAA-GAAACAAAAGAGAGGAAA-TTTGTAAACATAATTGT 1794
| ||||||||||||||||||||| |||||||||||||| ||| ||||| |||||||||||
Sbjct 1740 AATTAGATTAAAGATTTGAAAAAAGAAACAAAAGAGAGCAAAATTTGTGAACATAATTGT 1799
Query 1795 TTTGAAAAAGATTTGAAC 1812
||||||||||||||||||
Sbjct 1800 TTTGAAAAAGATTTGAAC 1817
> AT2G41140.1 | Symbols: CRK1, ATCRK1, ATCBK3 | CDPK-related kinase
1 | chr2:17150387-17153690 FORWARD LENGTH=2148
Length=2148
Score = 1801 bits (975), Expect = 0.0
Identities = 1435/1657 (87%), Gaps = 32/1657 (2%)
Strand=Plus/Plus
Query 97 GCGAAATCTTCAGGCTTTCCGTTTTATAGTCCAAGTCCAT-TACCTAGTC-TCTTCAAAA 154
|||||||| || ||||||||||||||||| || ||||| | ||||||| | | ||||||
Sbjct 202 GCGAAATCCTCTGGCTTTCCGTTTTATAGCCCGAGTCC-TGTACCTAG-CTTATTCAAAT 259
Query 155 CCTCACCAGCTGTGTCATCCTCGAGCGTGAGCTCCACGCCACTTCGTATCTTCAAGCGAC 214
|||||||| | ||| ||| || ||||||||||| ||||| ||||||||||||||| |||
Sbjct 260 CCTCACCA--TCTGT-ATCTTCTAGCGTGAGCTCAACGCCTCTTCGTATCTTCAAGAGAC 316
Query 215 CTTTCCCACCTCCCTCACCAGCTAAGCATATACGAGCTCTCCTCGCGCGTCGTC-ACGGT 273
||||||| ||||| || || |||||||| ||||||||| ||||||||||||| | | ||
Sbjct 317 CTTTCCCTCCTCCTTCTCCTGCTAAGCACATACGAGCTTTCCTCGCGCGTCG-CTATGGC 375
Query 274 TTTGTTAAGCCCAATGAAGCTTCGA-TCCCTGAAGGTAGTGAGTGTGAGGTTGGCCTTGA 332
| ||| ||||| ||||| | ||||| |||| ||||||| || |||||| | || || ||
Sbjct 376 TCTGTCAAGCCTAATGAGGTTTCGATTCCC-GAAGGTAAAGAATGTGAGATCGGTCTCGA 434
Query 333 CAAGAAATTTGGGTTCTCTAAGCAGTTTGCTTCACACTACGAGATTGATGGTGAGGTGGG 392
|||| ||||| || || || ||||||||||||||||| ||||||||||||||||||||
Sbjct 435 TAAGAGTTTTGGCTTTTCAAAACAGTTTGCTTCACACTATGAGATTGATGGTGAGGTGGG 494
Query 393 TCGAGGGCATTTTGGGTATACTTGCTCTGCTAAGGGGAAAAAAGGTAGCTTGAAAGGTCA 452
||| || |||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 495 TCGTGGACATTTTGGATATACTTGCTCTGCTAAGGGTAAAAAAGGTAGCTTGAAAGGTCA 554
Query 453 AGATGTGGCTGTCAAAGTTATTCCCAAATCCAAGATGACTACGGCAATTGCAATTGAGGA 512
||| || ||||| ||||||||||| ||||| |||||||| || |||||||| ||||||||
Sbjct 555 AGAAGTTGCTGTTAAAGTTATTCCTAAATCAAAGATGACAACTGCAATTGCGATTGAGGA 614
Query 513 TGTTAGAAGAGAAGTGAAGATATTGCGGGCTTTGACTGGTCACAAGAACCTAGTCCAGTT 572
|||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 615 TGTTAGTAGAGAAGTGAAGATGTTGCGGGCTTTGACTGGTCATAAGAACCTAGTCCAGTT 674
Query 573 CTATGACGCCTTCGAAGATGATGAAAATGTTTACATTGTGATGGAGTTATGCCAAGGCGG 632
||||||||| || |||||||||||||||||||| ||||| ||||| |||||| |||| ||
Sbjct 675 CTATGACGCGTTTGAAGATGATGAAAATGTTTATATTGTCATGGAATTATGCAAAGGTGG 734
Query 633 TGAACTTTTGGACAAGATACTTCAAAGGGGAGGCAAATACTCAGAAGTA-GATGCTAAAA 691
|||||| |||||||| |||||||||||||| || |||||||| |||| | ||||||||||
Sbjct 735 TGAACTCTTGGACAAAATACTTCAAAGGGGTGGAAAATACTCCGAAG-ATGATGCTAAAA 793
Query 692 AAGTAATGGTTCAGATTCTTAGTGTAGTAGCCTACTGTCATCTTCAAGGCGTGGTTCATC 751
|||| |||||||||||||| ||||| || || ||||||||||| ||||| |||||||| |
Sbjct 794 AAGTTATGGTTCAGATTCTCAGTGTTGTGGCTTACTGTCATCTACAAGGTGTGGTTCACC 853
Query 752 GTGACCTCAAACCAGAGAATTTTCTCTTCACTACAAAGGATGAGTCTTCTCCTCTGAAAG 811
||||||| ||||| ||||| ||||| ||| |||| ||||||||| |||||||||||||||
Sbjct 854 GTGACCTTAAACCCGAGAACTTTCTTTTCTCTACCAAGGATGAGACTTCTCCTCTGAAAG 913
Query 812 CCATTGATTTTGGTCTCTCTGACTATGTCAGGCCAGATGAGAGGTTGAATGACATTGTAG 871
| |||||||||||||| ||||||||||||| |||||| |||||||||||||| |||||||
Sbjct 914 CAATTGATTTTGGTCTTTCTGACTATGTCAAGCCAGACGAGAGGTTGAATGATATTGTAG 973
Query 872 GAAGTGCTTATTACGTGGCCCCTGAAGTTTTACACCGTACATATGGAACTGAGGCAGATA 931
| |||||||| || |||||||| |||||||||||||||||||||||||| || || || |
Sbjct 974 GGAGTGCTTACTATGTGGCCCCGGAAGTTTTACACCGTACATATGGAACAGAAGCTGACA 1033
Query 932 TGTGGAGTATTGGAGTGATTGCTTATATACTTCTCTGTGGTAGCCGGCCATTTTGGGCCC 991
|||||||||| ||||||||||||||||| ||||||||||| || || || ||||||||||
Sbjct 1034 TGTGGAGTATAGGAGTGATTGCTTATATTCTTCTCTGTGGCAGTCGACCCTTTTGGGCCC 1093
Query 992 GTTCTGAATCTGGAATCTTCCGAGCTGTTCTTAAA-GCAGAACCCAATTTCGAAGAAGCT 1050
|| ||||||| |||||||| |||||||| | |||| |||||||| ||||| |||||||||
Sbjct 1094 GTACTGAATCCGGAATCTTTCGAGCTGTAC-TAAAGGCAGAACCGAATTTTGAAGAAGCT 1152
Query 1051 CCTTGGCCATCTATTTCACCTGACGCTGTAGATTTTGTGAA-ACGTTTGTTAAATAAAGA 1109
|||||||| ||| | ||||| || ||||||||||||||||| | | ||| |||| |||||
Sbjct 1153 CCTTGGCCTTCTCTATCACCCGAAGCTGTAGATTTTGTGAAGA-GATTGCTAAACAAAGA 1211
Query 1110 TTACCGTAAGAGACTAACTGCTGCACAGGCTTTGTGCCATCCTTGGCTTGTTGGCTCGCA 1169
||||||||| ||||||||||| || ||||||||||| ||||| ||||| |||||||||||
Sbjct 1212 TTACCGTAAAAGACTAACTGCGGCCCAGGCTTTGTGTCATCCCTGGCTGGTTGGCTCGCA 1271
Query 1170 TGAATTAAAGATACCATCTGATATGATCATTTACAAGCTTGTAAAAGTATACATAATGTC 1229
|||| ||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 1272 TGAACTAAAGATTCCATCTGATATGATCATATACAAGCTTGTAAAAGTGTACATAATGTC 1331
Query 1230 GTCGTCTTTGAGAAAATCGGCTTTAGCGGCTCTTGCCAAAACTTTAACAGTACCGCAGCT 1289
| || ||||||||||||||||||||||||||||||||||| ||||| ||||||||| |
Sbjct 1332 AACTTCATTGAGAAAATCGGCTTTAGCGGCTCTTGCCAAAACATTAACTGTACCGCAGTT 1391
Query 1290 -GACTTAT-TTGCAAGAGCAGTTTA-ATCTGTTAGGACCGAGCAAAAACGGATATATCTC 1346
| | ||| || | ||||| || | || |||| || || |||||||| |||||||||||
Sbjct 1392 AG-CGTATCTT-CGGGAGCAATTCACAT-TGTTGGGGCCAAGCAAAAATGGATATATCTC 1448
Query 1347 GATGCAGAATTACAAAACAGCTATCTTGAAGAGCTCCACAGAAGCTACAAAGGATTCACG 1406
||||||||||||||||||||| ||| | ||||| || ||||| |||| |||||||| ||
Sbjct 1449 GATGCAGAATTACAAAACAGCAATCCTAAAGAGTTCAACAGATGCTATGAAGGATTCTCG 1508
Query 1407 AGTCTTGGATTTTGTACACATGATTAGTTGTCTTCAGTACAAGAAACTAGACTTTGAAGA 1466
||| || |||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 1509 AGTGTTTGATTTTGTTCACATGATAAGTTGTCTTCAATACAAGAAACTAGACTTTGAAGA 1568
Query 1467 GTTTTGCGCTTCAGCTTTAAGTGTTTATCAGCTAGAAGCAATGGAAACTTGGGAGCAACA 1526
|||||| |||||||| ||||| ||||||||||| ||||||||||| || |||||||||||
Sbjct 1569 GTTTTGTGCTTCAGCATTAAGCGTTTATCAGCTCGAAGCAATGGAGACATGGGAGCAACA 1628
Query 1527 TGCACGCCATGCATATGAGTTGTTTGAGAAGGATGGGAACAGAGTC-ATTATGATCGAAG 1585
|||||| | ||| || |||||||||||||| || ||||| || | | || ||||| ||||
Sbjct 1629 TGCACGGCGTGCTTACGAGTTGTTTGAGAAAGACGGGAATAG-GCCCATCATGATTGAAG 1687
Query 1586 AACTTGCCA-CGGAACTCGGACTCGGTCCATCGGTGCCTGTTCAGGTTGTTCTTCAAGAT 1644
||||||| | ||||||||||||| || ||||| ||||| || || ||||||||||| |||
Sbjct 1688 AACTTGC-ATCGGAACTCGGACTAGGGCCATCAGTGCCGGTGCACGTTGTTCTTCAGGAT 1746
Query 1645 TGGATAAGACATTCTGATGGGAAGCTAAGTTTCTT-GGGTTTTGTCAGACT-CTTACACG 1702
|||||||||||||||||||| || || |||||||| |||||| |||||| | || ||| |
Sbjct 1747 TGGATAAGACATTCTGATGGCAAACTTAGTTTCTTAGGGTTT-GTCAGATTGCT-ACATG 1804
Query 1703 GCGTGTCCTCTAGAACATTGCAGAAAGCGTAGA-TAA 1738
||||||| ||| | || || || ||||| |||| |||
Sbjct 1805 GCGTGTCTTCTCGGACCTTACAAAAAGCTTAGAGTAA 1841
> AT3G19100.1 | Symbols: | Protein kinase superfamily protein
| chr3:6605476-6609295 FORWARD LENGTH=2320
Length=2320
Score = 379 bits (205), Expect = 5e-104
Identities = 990/1355 (73%), Gaps = 110/1355 (8%)
Strand=Plus/Plus
Query 395 GAGGGCATTTTGGGTATACTTGCTCTGCTAAGGGGAAAAAAGGT-AGCTTGAAAGGTCAA 453
|||||||||||||||||||||||||||||||| || ||||| |||| |||| |||
Sbjct 660 GAGGGCATTTTGGGTATACTTGCTCTGCTAAGTTCAAGAAAGGAGAGCTC-AAAGATCAG 718
Query 454 GATGTGGCTGTCAAAGTTATTCCCAAA-TCCAAGATGAC-TACGGCAAT-TGCAATTGAG 510
|| || ||||| ||||| || |||||| || |||||||| | | ||||| | | || |||
Sbjct 719 GAGGTTGCTGTTAAAGTCAT-CCCAAAATCTAAGATGACAT-CTGCAATAT-CTATAGAG 775
Query 511 GATGTTAGAAGAGAAGTGAAGATATTGCGGGCTTTGA-CTGGTCA-CAAGAACCTAGTCC 568
||||| |||||||||||||| ||| ||||||| || | |||| || ||| || | || |
Sbjct 776 GATGTGAGAAGAGAAGTGAAAATACTGCGGGCGTT-ATCTGGACATCAA-AATTTGGTAC 833
Query 569 AGTTCTATGACGCCTTCGAAGATGATGAAAATGTTTACATTGTGATGGAGTTATGCCAAG 628
| |||||||| || ||||| || ||| || |||||||| || ||||||||||| ||
Sbjct 834 AATTCTATGATGCGTTCGAGGACAATGCCAACGTTTACATCGTTATGGAGTTATGTGGAG 893
Query 629 GCGGTGAACTT-TTGGACAAGATACTT-CAAAGGGGAGGCAAATACTCAGAAG-TAGATG 685
| ||||||||| ||| ||| |||||| ||| ||||||| |||||||| |||| | ||||
Sbjct 894 GTGGTGAACTTCTTG-ACAGGATACTAGCAA-GGGGAGGAAAATACTCTGAAGAT-GATG 950
Query 686 CTAAAAA-AGTAATGGTTCAGATTCTTAGTGTAGTAGCCTACTGTCATCTTCAAGGCGTG 744
| |||| ||| | | ||||| |||| || ||||| | ||||||||| ||||| ||
Sbjct 951 C-AAAAGCAGTGCTTATACAGATCCTTAACGTCGTAGCTTTCTGTCATCTCCAAGGAGTT 1009
Query 745 GTTCATCGTGACCTCAAACCAGAGAATTTTCTCT-T-CACTACAAAGGATGAGTCTTCTC 802
|||||||| || || ||||||||||| || || | | |||| | ||||| ||| ||||
Sbjct 1010 GTTCATCGAGATCTAAAACCAGAGAACTT-CT-TGTACACTTCCAAGGAGGAGAATTCTA 1067
Query 803 CTCT-GAAAGCCATTGATTTTGGTCTC-TCTGACTATGTCAGGCCAGATGAGAGGTTGAA 860
| | ||||| ||| |||||||| || || |||| |||||| ||||| || || | ||
Sbjct 1068 -TGTTGAAAGTCATAGATTTTGG-CTTATCGGACTTTGTCAGACCAGACGAAAGACTAAA 1125
Query 861 TGACATTGTAGGAAGTGCTTATTACGTGGCCCCTGAAGTTTTACACCG-TACATATGGAA 919
||| || || |||||||| |||||||| |||||||||||| ||||| | | | ||| |
Sbjct 1126 TGATATAGTGGGAAGTGCATATTACGTAGCCCCTGAAGTTCTACACAGAT-CTTATACCA 1184
Query 920 CTGAGGCAGATATGTGGAGTATTGGAGTGATTGCTTATATACTTCTCTGTGGTAGCCGGC 979
| || || ||| | ||||| || ||||| || || || || || || ||||| ||||| |
Sbjct 1185 CAGAAGCGGATGTATGGAGCATAGGAGTCATAGCATACATTCTCCTATGTGGAAGCCGTC 1244
Query 980 CATTTTGGGCCCGTTCTGAATCTGGAATCTTCCGAGCTGTTCTTAAAGCAGAACCCAATT 1039
| |||||||| | ||||||| ||||| ||| |||| ||||| ||||| || |||| ||
Sbjct 1245 CTTTTTGGGCAAGAACTGAATCAGGAATTTTCAGAGCAGTTCTAAAAGCTGATCCCAGTT 1304
Query 1040 TCGAAGAAGCTCCTTGGCCATCTATT-TCACCT-GACGCTGTAGATTTTGTGAA-ACGTT 1096
| || ||| |||||||||| || || || | | || || ||||||||| || | | |
Sbjct 1305 TTGATGAACCTCCTTGGCCTTCG-TTATC-CTTTGAGGCAAAAGATTTTGTTAAGA-GAT 1361
Query 1097 TGTTAAATAAAGATTAC-CGTAAGAGACTAACTGC-TGCACAGGCTTTG-TGCCATCCTT 1153
| || | || || | || || ||| | ||||| | | || |||||| ||| ||||||
Sbjct 1362 TATTGTACAAGGACC-CTCGGAAAAGAATGACTGCAT-CTCAAGCTTTGATGC-ATCCTT 1418
Query 1154 GGCTTGTTGGCTCGCATGAATTAA-AGATA-CC-ATCTGATATGATCAT-TTACAAGCTT 1209
|| | | || | | ||| || ||||| || || |||||| | || || |||||
Sbjct 1419 GGATCGCGGGTTATAA-GAA--AATAGATATCCCATTTGATATTCTGATCTT-CAAGCA- 1473
Query 1210 G-TAAAAGTATACATAATG-TCGTCGTCTTTGAGAAAATCGGCTTT-AGCGGCTCT-TGC 1265
| | |||| |||| | | | || ||||||||| | ||| | ||||| | |||||| | |
Sbjct 1474 GATCAAAGCATACTTGA-GATCTTCGTCTTTGCGCAAAGCTGCTTTGAT-GGCTCTGT-C 1530
Query 1266 CAAAACTTTAACAGTACCGCA-G--CTGACTT-ATTTGCAAGAGCAGTTTA-ATCTGTTA 1320
||| || ||||| ||||| | | || ||| || || ||| ||||||| | | |||
Sbjct 1531 CAAGACATTAAC--TACCG-ATGAACTT-CTTTATCTGAAAGCGCAGTTTGCA-CACTTA 1585
Query 1321 GGACCGAGCAAAAACGGA-T-AT-A-TCTCGATGCAGAATTACAAAACAG-CTATCTTGA 1375
| ||| | |||||| || | || | | | ||| || || || | | | | | ||||
Sbjct 1586 GCACCCAACAAAAATGGCCTCATCACTTTAGAT--AGCAT--CAGA-CTGGC-A-CTTGC 1638
Query 1376 -AGAGCTCCA-CAGAAGCTACAAAGGATTCACG-AGTCTTGGATTTTGTACACAT-GATT 1431
| | | || ||||||| | ||||| ||||| | || ||| ||| | ||| | ||
Sbjct 1639 GACAAATGCAACAGAAGCAATGAAGGAATCACGGA-TCCCGGACTTTCTTG-CATTG-TT 1695
Query 1432 AGTTGT-CTTCAGTACAA-GAAACTAGACTTTGAAGAGTTTTG--C-GCTTCAGCTTTAA 1486
| || ||||| ||||| | | | || |||||||||||||| | ||||| | |||
Sbjct 1696 AAATGGACTTCAATACAAAGGGA-TGGATTTTGAAGAGTTTTGTGCAGCTTC--CATTA- 1751
Query 1487 GTGTTTATCAGC-TAGAAG-CAATGGAAACTTGGGAGCA-A-CATGCACGCCATGCATAT 1542
| ||| |||||| | || | | | || ||||||||| | ||| | | ||||| |||
Sbjct 1752 GCGTTCATCAGCAT-GA-GTCTCTTGATTGTTGGGAGCAGAGCATTC--GTCATGCTTAT 1807
Query 1543 GAGTTGTTTGAGAAGGA-TGGGAACAGAGTCATTATGATCGAAGAACTTGCCACGGAACT 1601
||| | ||||| || || ||| ||| |||| || | ||||||||||| || | |||||
Sbjct 1808 GAGCTATTTGA-AATGAATGGAAACCGAGTTATCGTCATCGAAGAACTCGCTTCTGAACT 1866
Query 1602 CGGACTCGG-TCCATCGGTGCCTGTTCAGGTTGTTCTTCAA-GATTGGATAAGACATTCT 1659
|| | || || ||| | || ||||| |||| || || |||||||||||| ||
Sbjct 1867 TGGTGTTGGATC-ATCCATCCCGGTTCATACCATTCTA-AATGACTGGATAAGACATACT 1924
Query 1660 GATGGGAAGCTAAGTTTCTTGGGTTTTGTCAGACT 1694
|| |||||||| ||||||||||||||||||| |||
Sbjct 1925 GACGGGAAGCTGAGTTTCTTGGGTTTTGTCAAACT 1959
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 89708373915
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5