BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486152
Length=1723
Score E
Sequences producing significant alignments: (Bits) Value
AT3G57070.1 | Symbols: | Glutaredoxin family protein | chr3:21... 2529 0.0
AT2G41330.1 | Symbols: | Glutaredoxin family protein | chr2:17... 353 3e-96
> AT3G57070.1 | Symbols: | Glutaredoxin family protein | chr3:21123924-21125647
FORWARD LENGTH=1724
Length=1724
Score = 2529 bits (1369), Expect = 0.0
Identities = 1629/1747 (93%), Gaps = 47/1747 (3%)
Strand=Plus/Plus
Query 1 ATCAAAATCAAATCGAGAACTG-TG--GTGTCCGAAAATCAACATCAACATCG-TTC-TT 55
|||||||||||||||||||||| || |||||||||||||||||||||||||| ||| ||
Sbjct 1 ATCAAAATCAAATCGAGAACTGTTGTTGTGTCCGAAAATCAACATCAACATCGTTTCTTT 60
Query 56 CTGCTGCCATTAAATTTCACCATCTTCCACCTCCAACTGCCCTAGACAGCTATTCTCCAC 115
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 61 CTTCTGCCATTAAATTTCACCATCTTCCACCTTCAACTGCCCTAGACAGCTATTCTCCAC 120
Query 116 CTTTCTCTTTTCTCTCTCTGTTCTCTATCATTCCCAGAGCaaaaccaaa-aatctcagaa 174
||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||
Sbjct 121 CTTTCTCTTTTCTCTCTCTGTTCTCTATCATTCCCAGAG-ATAACCAAACAATCTCAGAA 179
Query 175 gaaaccagaaagagcaaagaaact-aaaagtctaaaacctaaaaagTCAAGTGTTTTT-A 232
|||||||||||||||||||||||| |||| | | | | | |||||| ||||||||| |
Sbjct 180 GAAACCAGAAAGAGCAAAGAAACTAAAAACTATTATTCAT-TAAAGTC-AGTGTTTTTAA 237
Query 233 ATTCGATTTCGTAATGGGTTCTTCTGCTTCAAAGACCGCTTCTTCTGTTTCTTCTACTTC 292
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct 238 ATTCGATTTCGTAATGGGTTCTTCTGCTTCAAAGACCGCTTCTTCCGTTTCTTCTGCTTC 297
Query 293 TTCCTCATCTGCGTTTTCTCCACCGCCGACCAAATTCAGCTCCGATTCATCATCTTCACC 352
||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 298 TTCCTCATCTGCGTTTTCTCCACCGCCGACCAAATTCAGCTCCGA-T--TCATCTTCACC 354
Query 353 GGCGGTGCAGAGAGCTTTTTCGTTTCCGACGCCGTTGGTTCACCATCCTCCGGCGAGAAA 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 355 GGCGGTGCAGAGAGCTTTTTCGTTTCCGACGCCGTTGGTTCACCATCCTCCGGCGAGAAA 414
Query 413 AGGCGACACTCATCACCTTGTCTCCCTCACATCTACGTCGTACGGTTCTCTTCTCCTCCT 472
||||||| ||||||||||||| ||||| |||||||| |||||||||||||||||||||||
Sbjct 415 AGGCGACTCTCATCACCTTGTTTCCCTTACATCTACATCGTACGGTTCTCTTCTCCTCCT 474
Query 473 CGATCTCGATGGATCCAATAACT-C-C-TCCGACCAACAAACGCTGCCTCGTATCTCAAT 529
||||||||||||||||| |||| | | ||||||||||||||||||||||||||||||||
Sbjct 475 TGATCTCGATGGATCCAAAAACTCCTCTTCCGACCAACAAACGCTGCCTCGTATCTCAAT 534
Query 530 CTCCGGGAAGAACACACCAGATCCGGTCTCTCCTGACTCCGTCATAAACACGTGGGAGCT 589
|||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||
Sbjct 535 CTCCGGGAAGAACACACCAGATCCGGTCTCTCCTGATTCAGTCATAAACACTTGGGAGCT 594
Query 590 TATGGATGGCTTGGACGACGAATTCGAATTCGAAATTCCCAAACCTGGTAAGCGTCTAAA 649
|||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct 595 TATGGATGGCTTGGACGATGAATTCGAATTCGAAATTCCCAAACCGGGTAAGCGTCTAAA 654
Query 650 TTCGGATTTTTGCTCTAAACCCGACCCGAATCGGAATGTGAGTTTAAATGGGTCTGCGTT 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 655 TTCGGATTTTTGCTCTAAACCCGACCCGAATCGGAATGTGAGTTTAAATGGGTCTTCGTT 714
Query 710 GAAATTGGATGAATCTTACGAGATTGTGAGAATCGAAGAAGACGATGGAGATTGGGTTCC 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 715 GAAATTGGATGAATCTTACGAGATTGTGAGAATCGAAGAAGACGATGGAGATTGGGTTCC 774
Query 770 TTTGACTTATAAACCTAAGCAACCTTTGTGGAAGCATTTGTCTGAAGAATCATTTCTCTC 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 775 TTTGACTTATAAACCTAAGCAACCTTTGTGGAAGCATTTGTCTGAAGAATCATTTCTCTC 834
Query 830 TGATTTAGATCCCAGCATTGTCTCATCTTACAAGAAAGCTTTGTCTTCCAAGCAATTAAG 889
||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||
Sbjct 835 TGATTTAGATCCCAGCATTGTCTCATCCTACAAGAAAGCTTTGTCTTCTAAGCTATTAAG 894
Query 890 CAATCATAGTAACACTAGAAACCCTCTTAGACCCACAAAATCCCTCTCTTGTAGCCCATC 949
|||||||||||| ||||||||||||| |||||||||||| || |||||||||||||||||
Sbjct 895 CAATCATAGTAATACTAGAAACCCTCATAGACCCACAAAGTCTCTCTCTTGTAGCCCATC 954
Query 950 ATC----C-ATC--T-T-AATCAGTGAAGAACCAAAATCTGTATCCTCTAGTCAACTGAT 1000
||| | ||| | | ||| || |||||||||||||||||||||||||||||| ||||
Sbjct 955 ATCAAATCCATCCATCTTAATAAGCGAAGAACCAAAATCTGTATCCTCTAGTCAATTGAT 1014
Query 1001 TTCATCAC-AGGCCAAACCGAGATTACCAGGGACAGAAGACAAGATTGTGCTCTACTTCA 1059
|||||||| || ||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 1015 TTCATCACCAG-CCAAACCGAGATTACCAGGAACAGAAGACAAGATTGTACTCTACTTCA 1073
Query 1060 CAACCCTCCGAGGAATTCGAAAGACATACGAGGATTGCTGTTGCGTTAGAGCGATACTGA 1119
|||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct 1074 CAACCCTCAGAGGAATTCGAAAGACATACGAGGATTGTTGTTGCGTTAGAGCGATATTGA 1133
Query 1120 GAGG-GCTTCAAGTCACGGTAGACGAACGTGACATCTCTATGGATTCTAAATACAGGAAA 1178
|||| | ||||||| | ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1134 GAGGAG-TTCAAGTGTCCGTAGACGAACGTGACATCTCTATGGATTCCAAATACAGGAAA 1192
Query 1179 GAGCTTCAAAGTGTGCTTGTTGCCGCAGAGAAACCGGTTTGTTTGCCTCAGGTGTTTATC 1238
||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1193 GAGCTTCAAAGCGTGCTTGGCGCCGCAGAGAAACCGGTTTGTTTGCCTCAGGTGTTTATC 1252
Query 1239 AGAGGAACTCACATTGGTGGCGTGGAGGAGATTATGCAGCTAAACGATGGTGGTGAATTA 1298
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1253 AGAGGAACTCACATTGGTGGCGTGGAGGAGATTATGCAGCTAAATGATGGTGGTGAATTA 1312
Query 1299 GCAGAGATGTTGAAAGATTTCCCTGCTTGTGAACGCTTGGGGACATGCCGGAGCTGTGGG 1358
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1313 GCAGAGATGTTGAAAGATTTCCCTGCTTGTGAACGCTTGGGGACATGCCGGAGCTGTGGT 1372
Query 1359 GATGCAAGGTTTGTGCCTTGTACTAACTGCGACGGAAGCACCAAAGTGTTTGAAGAACAA 1418
||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||
Sbjct 1373 GATGCAAGGTTTGTGCCTTGTACTAACTGTGATGGTAGCACCAAAGTGTTTGAAGAACAA 1432
Query 1419 GACGAACGGTTCAAGCGATGTCCTAAATGCAATGAGAATGGATTGGTGCGTTGTCGCGTG 1478
|| |||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 1433 GATGAACGGTTTAAGCGGTGTCCTAAATGCAATGAGAATGGATTGGTGCGTTGTCGTGTG 1492
Query 1479 TGTTGTCTCTAAGTGATCTGTTTGATCAAAAGCTGTGCGGGTGAAAGGGGAATATAGATT 1538
|||||||||||||||||| ||||||||||||| |||| | | ||||||||| ||||||||
Sbjct 1493 TGTTGTCTCTAAGTGATCAGTTTGATCAAAAGATGTGTGTGAGAAAGGGGA-TATAGATT 1551
Query 1539 GATTGACTAAACCTGGTATTTGGTTAGTAATGTATATTGAAATAAGTAAGTTGGCTCAAG 1598
|||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1552 GATTGACTAAACATGGTATTTGGTTAGTAATGTATATTCAAATAAGTAAGTTGGCTCAAG 1611
Query 1599 CCTTTTATG-TT-ACTCTCTTATGACTTGTGTTCTTTTGTTCCATTTATGTTCTTGATCT 1656
|||||||| || ||||| | |||| |||||||||||||||||||||| | |||||| ||
Sbjct 1612 CCTTTTATTATTTACTCT-T-ATGAGTTGTGTTCTTTTGTTCCATTTACGCTCTTGACCT 1669
Query 1657 TGACCCTTAAACTAAATGATTCTTACTATACTATATTATAAGTACATAAAATGTTAGATG 1716
| || ||||||||||||||||||||| | | | |||||| ||||| ||||||
Sbjct 1670 T-----TTGAACTAAATGATTCTTACTATA-TG-A--A---GTACATCAAATGGTAGATG 1717
Query 1717 ATGATTG 1723
|||||||
Sbjct 1718 ATGATTG 1724
> AT2G41330.1 | Symbols: | Glutaredoxin family protein | chr2:17226948-17228378
FORWARD LENGTH=1431
Length=1431
Score = 353 bits (191), Expect = 3e-96
Identities = 371/456 (81%), Gaps = 19/456 (4%)
Strand=Plus/Plus
Query 1039 ACAAGATTGT-GCTCTACTTCACAACCCTCCGAGGAATTCGAAAGACATACGAGGATTGC 1097
||||||| || | | |||||||| | |||| |||||||||||||||| || || |||||
Sbjct 880 ACAAGATAGTAG-TATACTTCACTAGCCTCAGAGGAATTCGAAAGACGTATGAAGATTGT 938
Query 1098 TGTTGCGTTAGAGCGATACTGAGAGGGCTTCAAGTCACGGTAGACGAACGTGACATCTCT 1157
|||||||||||||||||| |||||||| |||| || ||||||| || |||||||||||
Sbjct 939 TGTTGCGTTAGAGCGATATTGAGAGGGTTTCAGGTTGCGGTAGAGGAGCGTGACATCTCA 998
Query 1158 ATGGATTCTAAATACAGGAAAGAGCTTCA-AAGTGTGCTTGTTGCCGCAGAGAAACCGGT 1216
||||| || |||||||||||||||||||| || || || | | || ||||||||||||
Sbjct 999 ATGGACTCCAAATACAGGAAAGAGCTTCAGAA-TGCACTCG--G-CGAAGAGAAACCGGT 1054
Query 1217 TTGTTTGCCTCAGGTGTTTATCAGAGGAACTCA-CATTGGTGGCGTGGAGGAGATTATGC 1275
||||||||||||||||||||| ||||| || ||||||||| | |||||||| | |
Sbjct 1055 TTGTTTGCCTCAGGTGTTTATAAGAGGCG-TCCGCATTGGTGGAATTGAGGAGATCAAGA 1113
Query 1276 -AGCTAAACGATGGTGGTGAATTAGCAGAGATGTTGAAAGATTTCCCTGCTTGTGAA-CG 1333
| || |||||||| |||||| | ||||||||||| |||||||| |||||||| ||| |
Sbjct 1114 TA-CTCAACGATGGAGGTGAACTGGCAGAGATGTTAAAAGATTTTCCTGCTTGCGAATC- 1171
Query 1334 C-TTGGGGACATGCCGG-AGCTGTGGGGATGCAAGGTTTGTGCCTTGTACTAACTGCGAC 1391
| |||| | | ||| | ||||| || ||||||||||||||||| |||||||| || | |
Sbjct 1172 CATTGGAGCC-TGC-GATAGCTGCGGAGATGCAAGGTTTGTGCCGTGTACTAATTGTGGC 1229
Query 1392 GGAAGCACCAAAGTGTTTGAAGAACAAGACGAACGGTTCAAGCGATGTCC-TAAATGCAA 1450
|| || || ||||||||||| |||||||| || |||| ||| |||| | | ||||||
Sbjct 1230 GGTAGTACTAAAGTGTTTGAGGAACAAGAAGATGGGTTTAAGAGATG-CAATGGATGCAA 1288
Query 1451 TGAGAATGGATTGGTGCGTTGTCGCGTGTGTTGTCT 1486
||||||||||||||| |||||| | |||||||||
Sbjct 1289 TGAGAATGGATTGGTACGTTGTAACAAGTGTTGTCT 1324
Score = 132 bits (71), Expect = 1e-29
Identities = 98/111 (88%), Gaps = 2/111 (2%)
Strand=Plus/Plus
Query 771 TTGACTTATAAACCTAAGCAACCTTTGTGGAAGCATTTGTCTGAAGAATCATTTCTCTCT 830
||| ||| |||||||||||||||| ||||||| ||| |||||||||||||||||||||||
Sbjct 621 TTGCCTTTTAAACCTAAGCAACCTCTGTGGAAACATATGTCTGAAGAATCATTTCTCTCT 680
Query 831 GATTTAGATCCCAGCATTGTCTCATCTTACAAGAA-AGCTTTGTCTTCCAA 880
||||||||||| | |||| ||||||||||||| || ||| |||| |||||
Sbjct 681 GATTTAGATCCTAACATTATCTCATCTTACAA-AAGAGCACTGTCCTCCAA 730
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 85190324865
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5