BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg486169 Length=1079 Score E Sequences producing significant alignments: (Bits) Value AT3G57270.1 | Symbols: BG1 | beta-1,3-glucanase 1 | chr3:211912... 1535 0.0 > AT3G57270.1 | Symbols: BG1 | beta-1,3-glucanase 1 | chr3:21191237-21193189 REVERSE LENGTH=1193 Length=1193 Score = 1535 bits (831), Expect = 0.0 Identities = 1002/1085 (92%), Gaps = 9/1085 (1%) Strand=Plus/Plus Query 1 CATCTCTTTCTTAACCT-A--ACGATGGATCTCCGATTCTTGGCGTCCTTGACCTTTCTT 57 |||||||||||| |||| | ||||||||||||||||||||||||||||||||| ||||| Sbjct 48 CATCTCTTTCTTCACCTAACGACGATGGATCTCCGATTCTTGGCGTCCTTGACCCTTCTT 107 Query 58 CTCGGTCTATTCTTCGCCAATACAATTCCAGCAGTTCGACAAGTCGGGGTTTGCTACGGA 117 |||||||||||||||| |||||||| |||| ||| | |||||||||| |||||||| ||| Sbjct 108 CTCGGTCTATTCTTCGTCAATACAAATCCAACAGGTGGACAAGTCGGCGTTTGCTATGGA 167 Query 118 AGAAACGGCGACAACCTCCCTTCGGCGGCAGAAACCGTCGAGCTCTTCAAGCAGAGAAAC 177 ||||||||| ||||||||||||| | ||||||||| | | ||||||||| |||| |||| Sbjct 168 AGAAACGGCAACAACCTCCCTTCACCAGCAGAAACCATTGCGCTCTTCAAACAGAAAAAC 227 Query 178 ATCCGACGAGTTAGGCTATACACTCCAGACCACGACGTTCTAGACGCCCTACGTGGCTCC 237 |||| ||||||||||||||||| ||| |||||||||||||||| |||||||||||||||| Sbjct 228 ATCCAACGAGTTAGGCTATACAGTCCGGACCACGACGTTCTAGCCGCCCTACGTGGCTCC 287 Query 238 AACATCGAGGTAACGCTGGGCCTTCCCAACTCTTATCTACAGAGCGTGGCATCGAGCCAA 297 |||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||| Sbjct 288 AACATCGAGGTAACGCTGGGTCTTCCCAACTCTTACCTACAGAGCGTGGCCTCGAGCCAA 347 Query 298 TCACAAGCTAACACGTGGGTCCAAACCAACGTCATGAACTACGTGAATGGCGTCAAGTTC 357 |||||||||||| ||||||| |||||| ||||||||||||||| ||||||||||| |||| Sbjct 348 TCACAAGCTAACGCGTGGGTACAAACCTACGTCATGAACTACGCGAATGGCGTCAGGTTC 407 Query 358 CGTTACATATCTGTTGGGAACGAAGTTAAGATCTCTGACTCTTATGCACAGTTCCTAGTC 417 |||||||||||||||||||| |||||||| ||||| |||||||| ||||||||||||||| Sbjct 408 CGTTACATATCTGTTGGGAATGAAGTTAAAATCTCCGACTCTTACGCACAGTTCCTAGTC 467 Query 418 CCGGCCAT-GATAAACATTGACCGGGCGGTTTTAGCAGCCGGACTAGGTGGTCGTATCAA 476 || ||||| || ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 468 CCTGCCATGGA-AAACATTGACCGGGCGGTTTTAGCAGCCGGACTCGGTGGTCGTATCAA 526 Query 477 GGTATCCACGGCGGTAGACATGGGAGTGCTCGGAGAGTCTTATCCACCATCGAAAGGTTC 536 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 527 GGTATCCACATCGGTAGACATGGGAGTGCTCCGAGAGTCTTATCCACCATCGAAAGGTTC 586 Query 537 GTTTAGGGGAGACGTTATGGTGGTAATGGAACCAATCATACGTTTCTTGGTAAGCAAGAA 596 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 587 GTTTAGGGGAGATGTTATGGTGGTAATGGAACCAATCATACGTTTCTTGGTAAGCAAGAA 646 Query 597 CTCTCCTTTACTCTTAAACCTCTACACTTACTTCAGCTACGCGGGAAATAAAGATCAAAT 656 ||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||| Sbjct 647 CTCTCCTTTACTCTTAAACCTCTACACTTACTTCAGCTACGCGGGCAATGTAGGCCAAAT 706 Query 657 ACGACTCGATTACGCTCTCTTCACGGCTCCTCCAGGAATCGTTTTGGACCCTCCGAGATC 716 || ||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||| Sbjct 707 CCGGCTCGATTACGCTCTCTTCACGGCTCCTTCAGGAATCGTTTCGGACCCTCCTAGATC 766 Query 717 TTACCAAAACCTATTTGATGCGATGCTCGATGCGATGCACTCGGCTCTAGAGAGATCCGG 776 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| || Sbjct 767 TTACCAAAACCTATTTGATGCGATGCTCGATGCGATGTACTCGGCTCTAGAGAAATCGGG 826 Query 777 TGGCGGATCGTTGGAAGTAGTTGTGGCAGAGACCGGATGGCCAACGGGAGGAGGAATCGA 836 ||||| ||| |||||| |||||||||| ||||| |||||||||||||||||||||| ||| Sbjct 827 TGGCGCATCATTGGAAATAGTTGTGGCGGAGACTGGATGGCCAACGGGAGGAGGAACCGA 886 Query 837 TACAAACATACAGAATGCGGGAATTTATAACAATAATTTGATTAATCATGTGAAGAATGG 896 |||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||| Sbjct 887 TACAAACATAGAGAATGCGAGAATTTATAACAATAATTTGATTAAGCATGTGAAGAATGG 946 Query 897 GACACCGAAGAGACCGGGGAGAGAAATCGAGACATATTTATTTGCCATGTATGACGAGGA 956 ||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||| | Sbjct 947 GACACCGAAGAGACCAGGGAAAGAAATCGAGACATATTTATTTGCCATTTATGACGAGAA 1006 Query 957 T-AAGAAGCCGACTCCTCCTTATGTTGAGAAGTTTTGGGGATTGTTCTATCCGAACAAGC 1015 | || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1007 TCAA-AAGCCGACTCCTCCTTATGTTGAGAAGTTTTGGGGATTGTTCTATCCCAACAAGC 1065 Query 1016 AGCCTAAGTACGCTATTAACTTTGGTTGAACCGAACCGATATTCTAACCAAGG-AATGGT 1074 |||||||||| | |||||||||| |||| ||||||| |||||||| | |||| |||||| Sbjct 1066 AGCCTAAGTATGATATTAACTTTTATTGAGCCGAACCAATATTCTATC-AAGGGAATGGT 1124 Query 1075 ATATT 1079 ||||| Sbjct 1125 ATATT 1129 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 52861173885 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5