BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486186
Length=3196
Score E
Sequences producing significant alignments: (Bits) Value
AT3G57410.1 | Symbols: VLN3, ATVLN3 | villin 3 | chr3:21243136-... 5219 0.0
AT2G41740.1 | Symbols: VLN2, ATVLN2 | villin 2 | chr2:17410715-... 2750 0.0
> AT3G57410.1 | Symbols: VLN3, ATVLN3 | villin 3 | chr3:21243136-21251100
REVERSE LENGTH=3479
Length=3479
Score = 5219 bits (2826), Expect = 0.0
Identities = 3039/3145 (97%), Gaps = 2/3145 (0%)
Strand=Plus/Plus
Query 1 TCACAGTCTCGCTCGCGTCTTTCCTCAAACCTCTCTGTCGCTTCTTCTTCCTCGCCTCGT 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 16 TCACAGTCTCGCTCGCGTCTTTCCTCAAACCTCTCTGTCTCTTCTTCTTCCTCGCCTCGT 75
Query 61 CTACGCAATAATAATACTCTGTCTATCACAAAATCTCCACGAAAGCACTACTCGAAGATC 120
||||||||||||| |||||| | ||||||||||||||||||||||| |||||||||||||
Sbjct 76 CTACGCAATAATACTACTCT-TATATCACAAAATCTCCACGAAAGCGCTACTCGAAGATC 134
Query 121 TGTCTTTTCAGGTAGTTTATGTATTTTCTCTTGAAGGAAGAGATTAACCACTATATACAA 180
||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct 135 TGTCTTTTCAGGTCGTTTATGTATTTTCTCTTGAAGGAAGAGATTAGCCACTA-ATACAA 193
Query 181 AATGTCTGGGTCAGCAAAAGTATTGGATCCTGCGTTTCAAGGAGTCGGGCAGAAACCAGG 240
||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 194 AATGTCTGGGTCAACAAAAGTATTGGATCCTGCGTTTCAAGGAGTGGGGCAGAAACCAGG 253
Query 241 TACTGAAATCTGGAGAATTGAAAATTTTGAGCCAGTCCCAGTACCGAAGTCTGAACATGG 300
|||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct 254 TACTGAAATCTGGAGAATCGAAAATTTTGAGCCAGTCCCAGTACCAAAGTCTGAACATGG 313
Query 301 AAAGTTCTATATGGGAGATACTTACATTGTCTTGCAGTCCACACAGAATAAGGGGGGTGC 360
||||||||||||||||||||| ||||||||||||||| |||||||||||||||| || ||
Sbjct 314 AAAGTTCTATATGGGAGATACCTACATTGTCTTGCAGACCACACAGAATAAGGGTGGCGC 373
Query 361 TTATCTATTTGATATACATTTTTGGATTGGTAAAGATACAAGCCAGGATGAAGCTGGAAC 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 374 TTATCTATTTGATATACATTTTTGGATTGGTAAAGATACAAGCCAGGATGAAGCTGGAAC 433
Query 421 AGCAGCTGTCAAGACAGTTGAACTTGATGCAGCTCTTGGAGGCCGAGCTGTCCAATACCG 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 434 AGCAGCTGTCAAGACAGTTGAACTTGATGCAGCTCTTGGAGGCCGAGCTGTCCAATATCG 493
Query 481 TGAAATTCAAGGTCATGAATCTGATAAATTCTTGTCTTACTTCAAGCCTTGCATTATACC 540
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 494 TGAAATTCAAGGTCATGAATCTGACAAATTCTTGTCTTACTTCAAGCCTTGCATTATACC 553
Query 541 ACTAGAGGGTGGTGTTGCGTCTGGATTTAGAAAACCCGAGGAGGAGGAGTTTGAAACCCG 600
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct 554 ACTAGAGGGTGGTGTTGCGTCTGGATTTAAAAAACCGGAGGAGGAGGAGTTTGAAACCCG 613
Query 601 GCTGTATACCTGCAAAGGGAAACGTGCTGTCCACTTGAAGCAGGTTCCTTTTGCACGCTC 660
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 614 GCTGTATACCTGCAAAGGAAAACGTGCTGTCCACTTGAAGCAGGTTCCTTTTGCACGCTC 673
Query 661 ATCACTGAATCATGATGATGTGTTTATCTTGGACACCAAGGAAAAGATTTATCAGTTTAA 720
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 674 ATCTCTGAATCATGATGATGTGTTTATCTTGGACACCAAGGAAAAGATTTATCAGTTTAA 733
Query 721 TGGGGCAAATTCAAATATCCAAGAGAGAGCTAAAGCGTTGGTAGTCGTTCAATATTTGAA 780
||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 734 TGGTGCAAATTCAAATATCCAAGAGAGAGCTAAAGCGTTGGTAGTCATTCAATATTTGAA 793
Query 781 AGACAAGTTTCATGAAGGAACTTGTGACGTTGCTATTGTTGATGATGGAAAATTAGATAC 840
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 794 AGACAAGTTTCATGAAGGAACTTCTGACGTTGCTATTGTTGATGATGGAAAATTAGATAC 853
Query 841 AGAATCAGATTCTGGCGAGTTTTGGGTCCTCTTTGGGGGTTTTGCTCCAATAGCACGGAA 900
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||
Sbjct 854 AGAATCAGATTCTGGCGAGTTCTGGGTCCTCTTTGGGGGGTTTGCTCCAATAGCAAGGAA 913
Query 901 AGTTGCTAGTGAGGATGAAATTATTCCGGAGACAACTCCGCCTAAGCTTTATAGTATCGC 960
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 914 AGTTGCGAGTGAGGATGAAATTATTCCGGAGACAACTCCGCCTAAGCTTTATAGTATCGC 973
Query 961 TGATGGTCTGGTGGAATCGATAGACGGCGATTTATCCAAATCTATGCTGGAAAACGGTAA 1020
|||||||| ||||||||| |||||||||||||| |||||||||||||| |||||| |||
Sbjct 974 TGATGGTCAGGTGGAATCTATAGACGGCGATTTGTCCAAATCTATGCTAGAAAACAATAA 1033
Query 1021 ATGCTACCTTTTGGACTGCGGTTCTGAGGTATTTATCTGGGTTGGCCGAGTAACTCAAGT 1080
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct 1034 ATGCTACCTTTTGGACTGCGGTTCTGAGATCTTTATCTGGGTTGGCCGAGTAACTCAAGT 1093
Query 1081 GGAAGAGAGGAAAACTGCTATCCAAGCTGCTGAGGATTTTGTTGCTAGTGAAAATAGGCC 1140
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1094 GGAAGAGAGAAAAACTGCTATCCAAGCTGCTGAGGATTTTGTTGCTAGTGAAAATAGGCC 1153
Query 1141 AAAGGCAACACGCATAACCCGTGTTATTCAAGGTTATGAGCCCCATTCTTTCAAGTCTAA 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1154 AAAGGCAACACGCATAACCCGTGTTATTCAAGGTTATGAGCCCCATTCTTTCAAGTCTAA 1213
Query 1201 CTTTGACTCTTGGCCATCAGGCTCGGCAACTCCTGCTAACGAAGAAGGACGAGGAAAAGT 1260
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1214 CTTTGACTCTTGGCCATCAGGCTCGGCAACTCCTGCTAATGAAGAAGGACGAGGAAAAGT 1273
Query 1261 CGCTGCATTACTTAAGCAACAAGGTGTTGGGTTAAAGGGCCTGTCAAAAAGCACACCAGT 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1274 CGCTGCATTACTTAAGCAACAAGGTGTTGGGTTAAAGGGCCTGTCAAAAAGCACACCAGT 1333
Query 1321 GAATGAAGATATTCCACCATTGCTTGAAGGAGGTGGAAAGTTGGAGGTTTGGTACATTGA 1380
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1334 GAATGAGGATATTCCACCATTGCTTGAAGGAGGTGGAAAGTTGGAGGTTTGGTACATTGA 1393
Query 1381 TGGCAACTCGAAGACTCCTCTATCCAAAGATGATGTCGGAAAACTCTATTCTGGGGATTG 1440
|| |||||| |||||| ||||||||||||| ||||||||||||| ||||||||||| ||
Sbjct 1394 TGCCAACTCCAAGACTGTTCTATCCAAAGATCATGTCGGAAAACTTTATTCTGGGGACTG 1453
Query 1441 CTATTTGGTCCTTTATACCTACCATTCTGGTGAAAGGAAAGAAGACTACTTCTTGTGCTG 1500
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1454 CTATCTGGTCCTTTATACCTACCATTCTGGTGAAAGGAAAGAAGACTACTTCTTGTGCTG 1513
Query 1501 TTGGTTTGGAAAGAATAGTAATCAGGAGGATCAAGAAACAGCAGTTCGTCTAGCGAGCAC 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1514 TTGGTTTGGAAAGAATAGTAATCAGGAGGATCAAGAAACAGCAGTTCGTCTAGCGAGCAC 1573
Query 1561 AATGACAAATTCGTTGAAGGGAAGACCAGTGCAGGCCCGTATATTTGAGGGTAAAGAGCC 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1574 AATGACAAATTCGTTGAAGGGAAGACCAGTGCAGGCCCGTATATTTGAGGGTAAAGAGCC 1633
Query 1621 TCCACAATTTGTTGCACTTTTTCAACATATGGTTGTCCTTAAGGGTGGTTTGAGCTCTGG 1680
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1634 TCCACAATTTGTTGCACTTTTTCAACATATGGTTGTCCTTAAGGGCGGTTTGAGCTCTGG 1693
Query 1681 TTACAAAAATAGCATGACAGAGAAAGGTTCATCAGACGAAACCTACACACCCGAATCAAT 1740
|||||||||||| ||||||||||||||||| |||| |||||||||||| || ||||||||
Sbjct 1694 TTACAAAAATAGTATGACAGAGAAAGGTTCGTCAGGCGAAACCTACACGCCGGAATCAAT 1753
Query 1741 TGCACTTATTCAAGTATCTGGAACTGGAGTTCACAATAATAAGGCACTACAAGTTGAAGC 1800
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1754 TGCACTTATTCAAGTATCTGGAACTGGAGTTCACAATAATAAGGCTCTACAAGTTGAAGC 1813
Query 1801 TGTGGCAACTTCTTTGAACTCTTATGACTGCTTCCTTCTGCAATCTGGTACTTCCATGTT 1860
|||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 1814 GGTGGCAACTTCTTTGAACTCCTATGACTGCTTCCTTCTGCAATCGGGTACTTCCATGTT 1873
Query 1861 CCTTTGGGTTGGAAACCATAGTACGCATGAGCAGCAAGAACTGGCTGCTAAAGTTGCTGA 1920
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1874 CCTTTGGGTTGGAAACCATAGTACGCATGAGCAGCAGGAACTGGCTGCTAAAGTTGCTGA 1933
Query 1921 ATTCTTAAAGCCTGGGATTACTATCAAGCACGCAAAAGAGGGGACAGAGAGCTCGTCCTT 1980
||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||
Sbjct 1934 ATTCTTAAAGCCTGGGACTACTATCAAGCACGCAAAAGAGGGAACAGAGAGCTCATCCTT 1993
Query 1981 TTGGTTTGCACTTGGGGGAAAACAGAACTTCACCAGCAAGAAGGTTTCCTCTGAGACTGT 2040
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1994 TTGGTTTGCACTTGGGGGAAAACAGAACTTCACCAGCAAGAAAGTTTCCTCTGAGACTGT 2053
Query 2041 CAGGGATCCTCACTTGTTCTCCTTCTCCTTCAACAGAGGAAAGTTTCAGGTTGAAGAGAT 2100
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2054 CAGGGATCCTCACTTGTTCTCCTTTTCCTTCAACAGAGGAAAGTTTCAGGTTGAAGAGAT 2113
Query 2101 TCACAACTTTGATCAAGATGACCTCTTGACGGAGGAAATGCATTTACTAGATACTCATGC 2160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2114 TCACAACTTTGATCAAGATGACCTCTTGACGGAGGAAATGCATTTACTAGATACTCATGC 2173
Query 2161 TGAAGTTTTTGTCTGGGTTGGTCAATGTGTGGACCCCAAGGAAAAACAAACTGCCTTTGA 2220
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2174 TGAAGTTTTTGTCTGGGTTGGTCAATGTGTGGACCCTAAGGAAAAACAAACTGCCTTTGA 2233
Query 2221 GATTGGCCAAAGATACATAAATCTGGCTGGTTCCCTGGAAGGCTTGTCTCCAAAAGTTCC 2280
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2234 GATTGGCCAAAGATACATAAATCTGGCTGGTTCGCTGGAAGGCTTGTCTCCAAAAGTTCC 2293
Query 2281 ATTATACAAAATCACTGAGGGAAATGAACCATGCTTCTTCACCACTTATTTTTCATGGGA 2340
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2294 ATTATACAAAATCACTGAGGGAAATGAACCGTGCTTCTTCACCACTTATTTTTCATGGGA 2353
Query 2341 TCCTACTAAAGCTACTGTGCAAGGGAATTCCTTCCAAAAGAAGGCAGCATTATTACTTGG 2400
| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct 2354 TTCTACTAAAGCTACTGTGCAAGGGAATTCCTACCAGAAGAAGGCAGCATTATTACTTGG 2413
Query 2401 TACACACCACGTTGTGGAGGATCAGTCAAGCAGTGGGAACCAAGGGCCAAGGCAAAGGGC 2460
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 2414 TACACACCACGTTGTGGAGGATCAGTCTAGCAGTGGGAACCAAGGACCAAGGCAAAGGGC 2473
Query 2461 TGCTGCTTTAGCTGCCTTGACTTCTGCATTTAATTCTTCTTCTGGGAGAACAAGTTCTCC 2520
||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 2474 TGCTGCTTTAGCTGCCTTGACTTCTGCCTTTAATTCTTCTTCTGGGAGAACAAGCTCTCC 2533
Query 2521 GAGCCGAGACAGATCAAATGGAAGTCAAGGAGGTCCAAGACAAAGGGCTGAAGCTTTAGC 2580
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2534 GAGCCGAGACAGATCAAATGGAAGTCAAGGGGGTCCAAGACAAAGGGCTGAAGCTTTAGC 2593
Query 2581 CGCCTTAACATCCGCATTCAATTCTTCACCATCATCAAAGTCACCTCCCCGAAGACCAGG 2640
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2594 CGCCTTAACATCCGCATTCAATTCTTCACCATCATCAAAGTCACCTCCCCGAAGATCAGG 2653
Query 2641 ATTGACAAGTCAGGCGTCACAAAGAGCAGCAGCAGTGGCTGCTCTCTCCCAAGTTCTCAC 2700
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2654 ATTGACAAGCCAGGCGTCACAAAGAGCAGCAGCAGTGGCTGCTCTTTCCCAAGTTCTCAC 2713
Query 2701 TGCTGAGAAGAAGAAATCACCTGATACCAGCCCTTCTGCTGAAGCAAAAGATGAGAAAGC 2760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2714 TGCTGAGAAGAAGAAATCACCTGATACCAGCCCTTCTGCTGAAGCAAAAGATGAGAAAGC 2773
Query 2761 TTTCTCAGAAGTGGAGGCTTCCGAAGAAGCTTCTGAAGCCAAGGAGGAAGAGGAAGTTTC 2820
||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||| ||
Sbjct 2774 TTTCTCAGAAGTGGAGGCTACCGAAGAAGCTACTGAAGCCAAGGAAGAAGAGGAAGTGTC 2833
Query 2821 ACCTGCCGCAGAAGTGAGTGCTGAGGAAGCAAAATCAAAGCAGGATGATTCTGAAGTAGA 2880
|||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2834 ACCTGCAGCAGAAGCGAGTGCTGAGGAAGCAAAACCAAAGCAGGATGATTCTGAAGTAGA 2893
Query 2881 AACTACTGGAGCAACCTTCACCTACGAACGGCTACAAGCCAAATCTGGGAAACCAGTGAC 2940
||| ||||||| ||| |||||||||||||| |||||||||||||||| |||||| |||||
Sbjct 2894 AACAACTGGAGTAACTTTCACCTACGAACGACTACAAGCCAAATCTGAGAAACCCGTGAC 2953
Query 2941 AGGCATTGACTTCAAACGCAGAGAGGCTTACTTGTCTGAGGAAGAGTTCAAGACTGTATT 3000
||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 2954 AGGGATTGACTTCAAACGCAGAGAGGCTTACCTGTCTGAGGTAGAGTTCAAGACTGTATT 3013
Query 3001 TGGGATGGAGAAAGAAGCATTCTACAAATTGCCTAGATGGAAGCAAGATTTACTGAAGAA 3060
|||||||||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||
Sbjct 3014 TGGGATGGAGAAAGAATCATTCTACAAATTGCCTGGATGGAAACAAGACTTACTGAAGAA 3073
Query 3061 GAAATTTGACTTGTTCTAAGGATTCTCaaaaaaaaaTAAGTAGTGACCTCAGCGCTGCAG 3120
|||||| |||| |||||||||||||| ||||||||| || |||||||||||||| ||||
Sbjct 3074 GAAATTCAACTTATTCTAAGGATTCTCCAAAAAAAATTAGCAGTGACCTCAGCGCCGCAG 3133
Query 3121 CTATGAAGACAATGAACAGTTCCTT 3145
||||||||||||||||||||| |||
Sbjct 3134 CTATGAAGACAATGAACAGTTTCTT 3158
Score = 73.1 bits (39), Expect = 2e-11
Identities = 39/39 (100%), Gaps = 0/39 (0%)
Strand=Plus/Plus
Query 3158 TTTCTCATGGGTGGGTTTTGGGTTTGATTCTTCATATTC 3196
|||||||||||||||||||||||||||||||||||||||
Sbjct 3218 TTTCTCATGGGTGGGTTTTGGGTTTGATTCTTCATATTC 3256
> AT2G41740.1 | Symbols: VLN2, ATVLN2 | villin 2 | chr2:17410715-17417740
REVERSE LENGTH=3541
Length=3541
Score = 2750 bits (1489), Expect = 0.0
Identities = 2221/2572 (86%), Gaps = 60/2572 (2%)
Strand=Plus/Plus
Query 190 GTCAGCAAAAGTATTGGATCCTGCGTTTCAAGGAGTC-GGGCAGAAACCAGGTACTGAAA 248
|||| ||||||| ||||||||||| |||||||||| | || ||||||||||| |||||||
Sbjct 366 GTCAACAAAAGTGTTGGATCCTGCATTTCAAGGAG-CTGGCCAGAAACCAGGGACTGAAA 424
Query 249 TCTGGAGAATTGAAAATTTTGAGCCAGTCCCAGTACCGAAGTCTGAACATGGAAAGTTCT 308
||||||||||||| ||||||||| |||| || ||||| |||||||| |||||||||||||
Sbjct 425 TCTGGAGAATTGAGAATTTTGAGGCAGTTCCTGTACCAAAGTCTGAGCATGGAAAGTTCT 484
Query 309 ATATGGGAGATACTTACATTGTCTTGCAGTCCACACAGAATAAGGGGGGTGCTTATCTAT 368
||||||||||||||||||||||||||||| | ||||||||||| |||||||||||| | |
Sbjct 485 ATATGGGAGATACTTACATTGTCTTGCAGACAACACAGAATAAAGGGGGTGCTTATTTGT 544
Query 369 TTGATATACATTTTTGGATTGGTAAAGATACAAGCCAGGATGAAGCTGGAACAGCAGCTG 428
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 545 TTGATATACATTTCTGGATTGGTAAAGATACAAGCCAGGATGAAGCTGGAACAGCAGCTG 604
Query 429 TCAAGACAGTTGAACTTGATGCAGCTCTTGGAGGCCGAGCTGTCCAATACCGTGAAATTC 488
| || ||||||||||| ||||||| |||||||||||| ||||||||| |||| |||||||
Sbjct 605 TTAAAACAGTTGAACTCGATGCAGTTCTTGGAGGCCGTGCTGTCCAACACCGGGAAATTC 664
Query 489 AAGGTCATGAATCTGATAAATTCTTGTCTTACTTCAAGCCTTGCATTATACCACT-AGAG 547
| |||||||||||||| ||||||||||||||||||||||| || |||||||| || ||||
Sbjct 665 AGGGTCATGAATCTGACAAATTCTTGTCTTACTTCAAGCCATGTATTATACC-CTTAGAG 723
Query 548 GGTGGTGTTGCGTCTGGATTTAGAAAACCC--GAGGAGGAGGAGTTTGAAACCCGGCTGT 605
||||||||||||||||| ||| ||||| || || |||| |||||| |||||| | |
Sbjct 724 GGTGGTGTTGCGTCTGG-TTTC-AAAACAGTTGAAGAAGAGGTGTTTGAGACCCGGTTAT 781
Query 606 ATACCTGCAAAGGGAAACGTGCTGTCCACTTGAAGCAGGTTCCTTTTGCACGCTCATCAC 665
|||| |||||||| |||||||| ||| |||||||||||||||||||| ||||||||||
Sbjct 782 ATACTTGCAAAGGAAAACGTGCAATCCGTTTGAAGCAGGTTCCTTTTGCCCGCTCATCAC 841
Query 666 TGAATCATGATGATGTGTTTATCTTGGACACCAAGGAAAAGATTTATCAGTTTAATGGGG 725
|||||||||||||||| ||||||||||||||| |||||||||| |||||||| ||||| |
Sbjct 842 TGAATCATGATGATGTATTTATCTTGGACACCGAGGAAAAGATCTATCAGTTCAATGGTG 901
Query 726 CAAATTCAAATATCCAAGAGAGAGCTAAAGCGTTGGTAGTCGTTCAATATTTGAAAGACA 785
|||||||||| || || |||||||| ||||| |||| ||||||||| ||||| |||||||
Sbjct 902 CAAATTCAAACATTCAGGAGAGAGCCAAAGCTTTGGAAGTCGTTCAGTATTTAAAAGACA 961
Query 786 AGTTTCATGAAGGAACTTGTGACGTTGCTATTGTTGATGATGGAAAATTAGATACAGAAT 845
||| ||| |||||||||||||| ||||| ||||||||||| |||||||||||||||||||
Sbjct 962 AGTATCACGAAGGAACTTGTGATGTTGCGATTGTTGATGACGGAAAATTAGATACAGAAT 1021
Query 846 CAGATTCTGGCG-AGTTTTGGGTCCTCTTTGGGGGTTTTGCTCCAATAGCACGGAAAGTT 904
|||||||||| | | ||||||||||||||||| |||||||||||||| | | ||||||||
Sbjct 1022 CAGATTCTGGTGCA-TTTTGGGTCCTCTTTGGTGGTTTTGCTCCAATCGGAAGGAAAGTT 1080
Query 905 GCTAGTGAGGATGAAATTATTCCGGAGACAACTCCGCCTAAGCTTTATAGTATCGCTGAT 964
|| | ||| ||||| ||| | |||||| ||||||| |||||||||||| | ||| |||||
Sbjct 1081 GCCAATGATGATGACATTGTCCCGGAGTCAACTCCACCTAAGCTTTATTGCATCACTGAT 1140
Query 965 GGTCTGGTGGAATCGATAGACGGCGATTTATCCAAATCTATGCTGGAAAACGGTAAATGC 1024
||| | ||||| | |||||||| || ||||||||||||||||||||||| |||||||
Sbjct 1141 GGTAAGATGGAACCAATAGACGGTGACCTATCCAAATCTATGCTGGAAAACACTAAATGC 1200
Query 1025 TACCTTTTGGACTGCGGTTCTGAGGTATTTATCTGGGTTGGCCGAGTAACTCAAGTGGAA 1084
||||| |||||||| || ||||| ||| ||||||||||||||| || |||||||| ||
Sbjct 1201 TACCTCTTGGACTGTGGCGCTGAGATATATATCTGGGTTGGCCGTGTCACTCAAGTAGAT 1260
Query 1085 GAGAGGAAAACTGCTA-TCCAAGCTGCTGAGGATTTTGTTGCTAGTGAAAATAGGCCAAA 1143
||||||||| |||||| || || |||||||||| || ||||||||||||||||||||||
Sbjct 1261 GAGAGGAAAGCTGCTAGTC-AATCTGCTGAGGAATTCCTTGCTAGTGAAAATAGGCCAAA 1319
Query 1144 GGCAACACGCATAACCCGTGTTATTCAAGGTTATGAGCCCCATTCTTTCAAGTCTAACTT 1203
|||||||| |||| ||||| || |||||||||||| ||||||||||||||||||||||
Sbjct 1320 GGCAACACATGTAACTCGTGTAATCCAAGGTTATGAGTCCCATTCTTTCAAGTCTAACTT 1379
Query 1204 TGACTCTTGGCCATCAGGCTCGGCAACTCCTGCTAACGAAGAAGGACGAGGAAAAGTCGC 1263
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct 1380 TGACTCTTGGCCATCAGGCTCGGCCACTCCTGGTAACGAAGAAGGACGAGGAAAAGTCGC 1439
Query 1264 TGCATTACTTAAGCAACAAGGTGTTGGGTTAAAGGGCCT-GTCAAAAAGCACACCAGTGA 1322
||| ||||| ||||||||||| |||||| | |||||| | | ||||||| |||||||||
Sbjct 1440 TGCTTTACTGAAGCAACAAGGCGTTGGGCTCAAGGGCATTG-CAAAAAGTGCACCAGTGA 1498
Query 1323 ATGAAGATATTCCACCAT-TGCTTGAAGGAGGTGGAAAGTTGGAGGTTTGGTACATTGAT 1381
|||| ||||||||||| | |||||||| | |||||||| ||||||||||||||| || ||
Sbjct 1499 ATGAGGATATTCCACC-TCTGCTTGAAAGTGGTGGAAAATTGGAGGTTTGGTACGTTAAT 1557
Query 1382 GGCAAC-TCGAAGACTCCTCT-ATCC-AAAGATGATGTCGGAAAACTCTATTCTGGGGAT 1438
|| || || |||||||| || | || ||||| ||| | ||||| ||||||||||||||
Sbjct 1558 GGTAAAGTC-AAGACTCC-CTTA-CCTAAAGAAGATATTGGAAAGCTCTATTCTGGGGAC 1614
Query 1439 TGCTATTTGGTCCTTTATACCTACCATTCTGGTGAAAGGAAAGAAGACTACTTCTTGTGC 1498
||||||||||||||||||||||| |||||||| ||||||||||| || || |||||| |
Sbjct 1615 TGCTATTTGGTCCTTTATACCTATCATTCTGGGGAAAGGAAAGACGAATATTTCTTGAGT 1674
Query 1499 TGTTGGTTTGGAAAGAATAGTAATCAGGAGGATCAAGAAACAGCAGTTCGTCTAGCGAGC 1558
||||||||||||||||| || | || |||||| ||||| |||||| |||| || ||||
Sbjct 1675 TGTTGGTTTGGAAAGAAAAGCATTCCGGAGGACCAAGATACAGCAATTCGACTGGCGAAT 1734
Query 1559 ACAATGACAAATTCGTTGAAGGGAAGACCAGTGCAGGCCCGTATATTTGAGGGTAAAGAG 1618
|||||| |||| ||||| || |||||||| ||||||| |||||||| ||||||||||||
Sbjct 1735 ACAATGTCAAACTCGTTAAAAGGAAGACCTGTGCAGGGCCGTATATACGAGGGTAAAGAG 1794
Query 1619 CCTCCACAATTTGTTGCACTTTTTCAACATATGGTTGTCCTTAA-GGGTGGTTTGAGCTC 1677
||||||||||||||||| |||||||||| |||||| ||| |||| |||||||||||||||
Sbjct 1795 CCTCCACAATTTGTTGCCCTTTTTCAACCTATGGTGGTC-TTAAAGGGTGGTTTGAGCTC 1853
Query 1678 TGGTTACAAAAATAGCATGACAGAGAAAG-GTTCATCAGACGAAACCTACACACCCGAAT 1736
||| ||||||| || ||| |||| || || || |||||||||||||||| || ||||
Sbjct 1854 TGGGTACAAAAGCAGTATGGGAGAGTCAGAGT-CAACAGACGAAACCTACACGCCAGAAT 1912
Query 1737 CAATTGCACTTA-TTCAAGTATCTGGAACTGGAGTTCACAATAATAAGGCACTACAAGTT 1795
|||||||||| | |||||||||||||||| |||||||||||||||||||| | ||||||
Sbjct 1913 CAATTGCACT-AGTTCAAGTATCTGGAACCGGAGTTCACAATAATAAGGCTGTGCAAGTT 1971
Query 1796 GAAGCTGTGGCAACTTCTTTGAACTCTTATGACTGCTTCCTTCTGCAATCTGGTACTTCC 1855
||| | |||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1972 GAAACGGTGGCAACATCTTTGAACTCTTATGAGTGCTTCCTTCTGCAATCTGGTACTTCC 2031
Query 1856 ATGTTCCTTTGGGTTGGAAACCATAGTACGCATGAGCAGCAAGAACTGGCTGCTAAAGTT 1915
|||||||||||| |||||| || ||||||||||| |||| ||||||||| ||||||||
Sbjct 2032 ATGTTCCTTTGGCATGGAAATCAAAGTACGCATGAACAGCTAGAACTGGCCACTAAAGTT 2091
Query 1916 GCTGAATTCTTAAAGCCTGGGATTACTATCAAGCACGCAAAAGAGGGGACAGAGAGCTCG 1975
||||||||||| ||||| ||||||||| ||||||| || ||||| || |||||||||||
Sbjct 2092 GCTGAATTCTTGAAGCCCGGGATTACTCTCAAGCATGCCAAAGAAGGAACAGAGAGCTCA 2151
Query 1976 TCCTTTTGGTTTGCACTTGGGGGAAAACAGAACTTCACCAGCAAGAAGGTTTCCTCTGAG 2035
||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 2152 ACCTTTTGGTTTGCACTTGGGGGAAAACAGAATTTCACCAGCAAGAAGGCTTCCTCTGAG 2211
Query 2036 ACTG-TCAGGGATCCTCACTTGTTCTCCTTCTCCTT-CAACAGAGGAAAGTTTCAGGTTG 2093
|| | |||||||||||||||| ||||| || | ||| |||||||||||||||||||||||
Sbjct 2212 AC-GATCAGGGATCCTCACTTATTCTCATT-TGCTTTCAACAGAGGAAAGTTTCAGGTTG 2269
Query 2094 AAGAGATTCACAACTTTGATCAAGATGACCTCTTGACGGAGGAAATGCATTTACTAGATA 2153
| |||||| ||||||||| |||||||||||||||||| ||||| || |||| ||||| |
Sbjct 2270 AGGAGATTTACAACTTTGCTCAAGATGACCTCTTGACTGAGGATATATATTTCCTAGACA 2329
Query 2154 CTCATGCTGAAGTTTTTGTCTGGGTTGGTCAATGTGTGGACCCCAAGGAAAAACAAACTG 2213
| |||||||||||||||||||||||||||||||||||||| || |||||||| |||||||
Sbjct 2330 CCCATGCTGAAGTTTTTGTCTGGGTTGGTCAATGTGTGGAGCCTAAGGAAAAGCAAACTG 2389
Query 2214 CCTTTGAGATTGGCCAAAGATACATAAATCTGGCTGGTTCCCTGGAAGGCTTGTC-TCCA 2272
|||||||||||||||| ||||||| |||| ||||| ||| ||||||||||| | |||
Sbjct 2390 TATTTGAGATTGGCCAAAAATACATAGATCTTGCTGGATCCTTGGAAGGCTTG-CATCCT 2448
Query 2273 AAAGTTCCATTATACAAAATCACTGA-GGGAAATGAACCATGCTTCTTCACCACTTATTT 2331
||||| ||| | |||||||||| ||| ||||| ||||||||||||||||||||||| ||
Sbjct 2449 AAAGTCCCAATCTACAAAATCAATGAAGGGAAC-GAACCATGCTTCTTCACCACTTACTT 2507
Query 2332 TTCATGGGAT-CCTACTAAAGCTA-CTGTGCAAGGGAATTCCTTCCA-AAAGAAGGCAGC 2388
||| |||||| || |||||||||| | || ||||| ||||| ||||| ||| |||||| |
Sbjct 2508 TTCTTGGGATGCC-ACTAAAGCTATC-GTACAAGGAAATTCATTCCAGAAA-AAGGCATC 2564
Query 2389 ATTATTACTTGGTACACACCACGTTGTGGAGGATCAGTC-AAGCAGTGGGAACCAAGGGC 2447
|| ||| |||| || |||||||||||||||||| |||| || | ||||||||||||| |
Sbjct 2565 GTTGTTATTTGGCACTCACCACGTTGTGGAGGATAAGTCTAA-CGGTGGGAACCAAGGAC 2623
Query 2448 CAAGGCAAAGGGCTGCTGCTTTAGCTGCCTTGACTTCTGCATTTAATTCTTCTTCTGGGA 2507
|||||||||||||| || |||||||||| | ||| |||||||| |||||| | |
Sbjct 2624 TAAGGCAAAGGGCTGAAGCACTAGCTGCCTTAAATTCGGCATTTAACTCTTCTAGTAACA 2683
Query 2508 GAACAAGT-TCTCCGAGCCGAG-ACAGATCAAATGGAAGTCAAGGA-GGTCCAAGACAAA 2564
| | | | | |||||| || |||||| ||| | |||||| | | || |||||||| |
Sbjct 2684 GGCCT-GCCTATTCGAGCC-AGGACAGATTAAACGAAAGTCACG-ACGGCCCAAGACAGA 2740
Query 2565 GGGCTGAAGCTTTAGCCGCCTTAACATCCGCATTCAATTCTTCA-C--CATCATC-AAAG 2620
| |||||||||||||||||||| ||||||||||||| ||||| | ||||| | |||
Sbjct 2741 GAGCTGAAGCTTTAGCCGCCTTGTCATCCGCATTCAACTCTTCTTCGTCATCAACTAAA- 2799
Query 2621 TCACCTCC-CCG--AAGACCAG-GATTGACAAGTCAGGCGTCACAAAGAGCAGCAGCAGT 2676
|| ||||| || ||| |||| | ||| |||||||| ||||| ||||||||||||||
Sbjct 2800 TCGCCTCCACCACCAAGGCCAGTGGG-GACGAGTCAGGCTTCACAGAGAGCAGCAGCAGT 2858
Query 2677 GGCTGCTCTCTCCCAAGTTCTCACTGCTGAGAAGAAGAAATCACCTGATACC 2728
||||||||| || |||||||| ||| || || ||||||||||||||||||
Sbjct 2859 GGCTGCTCTTTCTCAAGTTCTTGTTGCGGAAAATAAGAAATCACCTGATACC 2910
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 158979042367
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5