BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg486197 Length=1584 Score E Sequences producing significant alignments: (Bits) Value AT3G57510.1 | Symbols: ADPG1 | Pectin lyase-like superfamily pr... 2248 0.0 > AT3G57510.1 | Symbols: ADPG1 | Pectin lyase-like superfamily protein | chr3:21283338-21285941 REVERSE LENGTH=1603 Length=1603 Score = 2248 bits (1217), Expect = 0.0 Identities = 1493/1618 (92%), Gaps = 52/1618 (3%) Strand=Plus/Plus Query 1 TCATATTACATAATCCCAAATAAAG-CA-GCAAACATTCTCATCTTACTCACAAGGAAAC 58 |||||||||| ||||||||| ||| || |||||||||||||||| ||||||||| |||| Sbjct 1 TCATATTACACAATCCCAAA-CAAGACAGGCAAACATTCTCATCTCACTCACAAGAAAAC 59 Query 59 AACACTCATTC-TTTTT-T----AA---A-C-----CGAAATGGCCCGTTGTTGCAGACT 103 | ||| ||||| ||||| | || | | ||||||||||||||||||||||| Sbjct 60 AGCACACATTCTTTTTTCTGCAAAACCGATCAAAATCGAAATGGCCCGTTGTTGCAGACA 119 Query 104 TCTTGCTGTTTTCTTATGCGTTCTTTTGATGCTCTCTTTGTGTGAAGCTTTGAGTAGCAA 163 |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct 120 TCTTGCTGTTTTCTTATGCGTTCTTTTGATGCTCTCGTTGTGTAAAGCTTTGAGTAGCAA 179 Query 164 CGTTGATGATGGATATGGTCATGAAGATGGAAGTTTCGAATCCGATAGCTTGATCAAGCT 223 |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct 180 CGTTGATGATGGATATGGTCATGAAGATGGAAGTTTTGAATCCGATAGCTTGCTCAAGCT 239 Query 224 TAACAACGATGATGTTCTTAGCTTGAAAAGCTCCGATGAAACCACTTTGGAATCATCAAC 283 ||||||||||||||||||||||||| |||||| || ||||||||||||||| ||||||| Sbjct 240 CAACAACGATGATGTTCTTAGCTTGATAAGCTCAGACGAAACCACTTTGGAAGCATCAAC 299 Query 284 TGTTAGTGTTTCAAACTTCGGAGCCAAAGGAGATGGAAAAACCGATGATACTCAGGCCTT 343 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 300 CGTTAGTGTTTCAAACTTCGGAGCCAAAGGAGATGGAAAAACTGATGATACTCAGGCCTT 359 Query 344 CAAGAAAGCATGGAAAAAAGCATGTTCAACAAATGGAGTTACTACTTTCTTAATACCTAA 403 ||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||| Sbjct 360 CAAGAAAGCATGGAAGAAAGCATGTTCAACAAATGGAGTTACTACTTTCTTGGTTCCTAA 419 Query 404 AGGGAAGACTTATCTCCTTAAGTCTACTAGATTTAGAGGCCCATGCAAATCAC-TACGTA 462 ||| |||||||||||||||||||||||| |||||||||||||||||||||| | |||||| Sbjct 420 AGGAAAGACTTATCTCCTTAAGTCTACTCGATTTAGAGGCCCATGCAAATC-CTTACGTA 478 Query 463 ACTTTCAGATCCTAGGCACTTTATCAGCATCTACGAAACGATCAGATTACAAAGACAAAA 522 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 479 ACTTTCAGATCCTAGGCACTTTATCAGCATCTACGAAACGTTCAGATTACAAAGACAAAA 538 Query 523 ACCATTGGCTTATCTTAGAGGACGTTAACAATCTATCAATCGATGGTGGCTCGACGGGGA 582 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct 539 ACCATTGGCTTATCTTAGAGGACGTTAACAATCTATCAATCGACGGTGGCTCGACGGGAA 598 Query 583 TTATTAATGGCAACGGCAAAATCTGGTGGCAGAACTCATGCAAAATCGATAAATCTAAGC 642 |||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||| Sbjct 599 TTATTAATGGCAACGGAAAAACCTGGTGGCAGAACTCATGCAAAATCGACAAATCTAAGC 658 Query 643 CATGCACAAAAGCGCCAACGGCTCTTACTTTATACAATCTAAAGAATTTGAATGTGAAGA 702 ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 659 CATGCACAAAAGCTCCAACGGCTCTTACTTTATACAATTTAAAGAATTTGAATGTGAAGA 718 Query 703 ATCTGAGGGT-AAGAAATGCGCAGCAGATTCAGATTTCAATTGAGAAATGCAACAAAGTT 761 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 719 ATCTGAGGGTGAA-AAATGCGCAGCAGATTCAGATTTCAATTGAGAAATGCAACAAAGTT 777 Query 762 GAAGTTAGTAATGTTGTGATCACTGCTCCCGGCGATAGTCCCAACACCGATGGTATCCAT 821 |||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||| Sbjct 778 GAAGTTAGTAATGTTGAGATCACTGCTCCGGGCGATAGTCCCAACACAGATGGTATCCAT 837 Query 822 ATCACTAATACTCAAAACATTCGAGTCTCCAACTCAGATATCGGAACAGGTGATGATTGT 881 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 838 ATCACTAATACTCAAAACATTCGAGTCTCCAACTCAGATATCGGAACAGGTGATGATTGT 897 Query 882 ATATCCATTGAGGATGGAACGCAAAATCTTCAAATCTTTGATTTAACTTGCGGCCCTGGT 941 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 898 ATATCCATTGAGGATGGAACGCAAAATCTTCAAATCTTTGATTTAACTTGCGGCCCCGGT 957 Query 942 CACGGAATCAGCATTGGGAGCTTGGGGGACGACAATTCGAAAGCTTATGTCTCGGGAATT 1001 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 958 CACGGGATCAGCATTGGGAGCTTGGGGGACGACAATTCGAAAGCTTATGTCTCGGGAATT 1017 Query 1002 AATGTGGATGGTGCAAAGTTCTCTGAGAGTGATAATGGAGT-ACGGATTAAGACTTATCA 1060 |||||||||||||| ||||||||||||||||| |||||||| | |||||||||||||||| Sbjct 1018 AATGTGGATGGTGCTAAGTTCTCTGAGAGTGACAATGGAGTTA-GGATTAAGACTTATCA 1076 Query 1061 GGGAGGATCAGGGACTGCCAAGAACATTAAATTTCAAAACATTCGAATGGAAAATGTCAA 1120 |||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct 1077 GGGAGGATCAGGAACTGCCAAGAACATTAAATTTCAAAATATTCGAATGGAAAACGTCAA 1136 Query 1121 GAATCCGATCATAATCGACCAGAACTACTGCGACAAGGACAAATGCGAAGAACAAG-GAT 1179 |||||||||||||||||||||| |||||||||||||||||||||||||||| |||| | | Sbjct 1137 GAATCCGATCATAATCGACCAGGACTACTGCGACAAGGACAAATGCGAAGACCAAGAG-T 1195 Query 1180 CCGCCGTGCAAGTGAAAAACGTTGTGTACAAGAACATATCCGGTACAAGCGCGACGGATG 1239 | || ||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| Sbjct 1196 CGGCAGTGCAAGTGAAAAACGTTGTGTACAAGAACATATCTGGTACGAGCGCTACGGATG 1255 Query 1240 TGGCGATAACGTTGAATTGCAGTGAGAAGTATCCATGCCAAGGGATTGTGCTTGAGAACG 1299 |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct 1256 TGGCGATAACGTTGAATTGCAGCGAGAAGTATCCATGTCAAGGGATTGTGCTTGAGAACG 1315 Query 1300 TGAACATAAAAGGAGGAACAGCTTCTTGCAAAAATGCCAATGTTAAAAATCAGGGCACCG 1359 |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1316 TGAAAATAAAAGGAGGAACAGCTTCTTGCAAAAATGCCAATGTTAAAAATCAAGGCACCG 1375 Query 1360 TTTCTCCTAAATGCTCTTAA--G--CTAATTATGTAatatacatatacacgtataaatat 1415 |||||||||||||||||||| | ||||||||||||| ||||| ||| ||| || Sbjct 1376 TTTCTCCTAAATGCTCTTAACTGAGCTAATTATGTAATGCACATACACA--TATT--TAC 1431 Query 1416 atagaaatacatatatatatatatacacacatgtatattgtact-ctacgtattgcttct 1474 ||||| || ||||| | |||||||| || ||||||||||||| | | | ||||||||| Sbjct 1432 ATAGATATGCATAT-T-TATATATAG-CA--TGTATATTGTACTAC-ATGCATTGCTTCT 1485 Query 1475 taatatat--a-ta--g-tatatGGGAAAATAGTAGAAAGATTTGTTGTCCACATATAAA 1528 ||||| || | || | |||||| |||||||| |||||||||||| | ||||||||| Sbjct 1486 TAATACATGTAGTAAAGATATATGCAAAAATAGTCGAAAGATTTGTT-T--ACATATAAA 1542 Query 1529 ATTACCAACATTGATTATTA--GTATTTCCATGAATAAATTAATAAGATTATTTGTCT 1584 || ||||| ||| ||| ||| |||||| |||||||||| |||||||||||||||||| Sbjct 1543 ATCACCAATATTTATTGTTATTGTATTTTCATGAATAAAGTAATAAGATTATTTGTCT 1600 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 78212449110 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5