BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg486205 Length=1118 Score E Sequences producing significant alignments: (Bits) Value AT3G57560.1 | Symbols: NAGK | N-acetyl-l-glutamate kinase | chr... 1696 0.0 > AT3G57560.1 | Symbols: NAGK | N-acetyl-l-glutamate kinase | chr3:21310825-21312312 REVERSE LENGTH=1488 Length=1488 Score = 1696 bits (918), Expect = 0.0 Identities = 1054/1121 (94%), Gaps = 3/1121 (0%) Strand=Plus/Plus Query 1 ATGGCCACCGTCACATCCAATGCTTCACCTAAATCCTTCTCCTTCTCTATTTCCAATCCT 60 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct 106 ATGGCCACCGTCACATCCAATGCTTCACCTAAATCCTTCTCCTTCACTGTTTCCAATCCT 165 Query 61 CTGAAATCACTAATCCCCAACAAATCACCATCTCTCAACTATCCACCTCG---CAAGAAC 117 | ||| | ||||||||||||||||||||||||||| |||||| |||| ||||||| Sbjct 166 TTCAAAACCCTAATCCCCAACAAATCACCATCTCTCTGTTATCCAACTCGCAACAAGAAC 225 Query 118 CATCACCGTCTAGGTTTATCGATAAACGCCACCGTATCAACACCACCTTCAATTGCAACC 177 ||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||| Sbjct 226 CATCACCGTCTAGGTTTCTCGATAAAAGCCACCGTATCAACACCACCTTCAATCGCAACC 285 Query 178 GGAAATGCACCTTCACCGGATTACAGAGTGGAGATTCTCTCTGAATCTTTACCGTTTATC 237 ||||||||||||||||||||||||||||| ||||||||||| |||||| |||| |||||| Sbjct 286 GGAAATGCACCTTCACCGGATTACAGAGTCGAGATTCTCTCCGAATCTCTACCATTTATC 345 Query 238 CAAAAATTCCGTGGTAAAACCATAGTTGTCAAATACGGCGGCGCAGCAATGACTTCGCCG 297 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 346 CAAAAATTCCGAGGTAAAACCATAGTTGTCAAATACGGCGGCGCAGCAATGACTTCGCCG 405 Query 298 GAGCTCAAATCCTCCGTCGTCAGCGATCTCGTGCTCCTCGCGTGCGTTGGTCTTCGTCCG 357 || || |||||||||||||| ||||||||||||||||||||||| || |||||||||||| Sbjct 406 GAACTTAAATCCTCCGTCGTAAGCGATCTCGTGCTCCTCGCGTGTGTCGGTCTTCGTCCG 465 Query 358 ATCCTCGTTCATGGTGGTGGTCCTGATATTAACCGTTACCTGAAACAACTCAACATTCCA 417 ||||||||||| |||||||||||||| || |||||||||||||||||||||||||| ||| Sbjct 466 ATCCTCGTTCACGGTGGTGGTCCTGACATCAACCGTTACCTGAAACAACTCAACATCCCA 525 Query 418 GCTGAGTTTCGTGACGGACTTCGTGTCACTGACGCCACAACAATGGAGATCGTCTCTATG 477 |||||||||||||||||||| |||||||| ||||| || || |||||||||||||||||| Sbjct 526 GCTGAGTTTCGTGACGGACTACGTGTCACCGACGCAACGACGATGGAGATCGTCTCTATG 585 Query 478 GTTTTAGTCGGAAAAGTTAATAAGAATCTTGTTTCGCTTATTAACGCCGCCGGAGCAACC 537 |||||||||||||| || ||||||||||| ||||| |||||||||||||||||||| ||| Sbjct 586 GTTTTAGTCGGAAAGGTCAATAAGAATCTGGTTTCTCTTATTAACGCCGCCGGAGCCACC 645 Query 538 GCCGTGGGGTTATCAGGACACGACGGTCGTCTTCTCACTGCACGGCCTGTCCCCAATTCA 597 || ||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| Sbjct 646 GCTGTGGGGTTATCAGGACACGACGGTCGTCTTCTCACAGCACGACCTGTTCCCAATTCA 705 Query 598 GCTCAATTAGGTTTCGTTGGTGAAGTTGCAAGAGTTGATCCATCTGTGTTACGTCCGCTT 657 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 706 GCTCAGTTAGGTTTCGTTGGTGAAGTTGCAAGAGTTGATCCATCTGTGTTACGTCCGCTC 765 Query 658 GTTGATTACGGTTATATTCCAGTGATTGCCTCTGTTGCTGCTGATGATTCTGGTCAAGCT 717 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 766 GTTGATTATGGTTACATTCCAGTGATTGCCTCTGTTGCTGCTGATGATTCTGGTCAAGCT 825 Query 718 TACAATATCAATGCAGATACAGTTGCTGGAGAGCTTGCGGCGGCGCTTGGAGCTGAGAAA 777 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 826 TACAATATCAATGCAGATACAGTTGCTGGAGAGCTTGCGGCCGCGCTTGGAGCTGAGAAA 885 Query 778 TTGATTCTGTTGACTGATGTGGCTGGAATCTTGGAGAATAAAGAGGATCCGAGTAGTTTG 837 |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 886 CTGATTCTGCTGACTGATGTGGCTGGAATCTTGGAGAATAAAGAGGATCCAAGTAGTTTG 945 Query 838 GTGAAGGAGATTGATATAAAGGGAGTGAAGAAGATGATTGAAGATGGTAAAGTTGCTGGT 897 | ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct 946 ATAAAGGAGATTGATATAAAAGGAGTGAAGAAGATGATTGAAGATGGGAAAGTTGCTGGT 1005 Query 898 GGGATGATTCCTAAGGTGAAGTGTTGTATAAGGTCTCTTGCTCAAGGAGTTAAGACGGCT 957 |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct 1006 GGGATGATTCCTAAAGTGAAGTGTTGTATAAGGTCTCTAGCTCAAGGAGTTAAGACTGCT 1065 Query 958 AGTATTATTGATGGAAGGAGACAACATTCTCTGCTTCATGAGATTATGTCTGATGAAGGA 1017 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1066 AGTATTATTGATGGAAGGAGACAACATTCTTTGCTTCATGAGATTATGTCTGATGAAGGA 1125 Query 1018 GCTGGAACTATGATTACTGGATAAATTTGGTGCAATGGGTGATCATCAAAGTTGAGATTT 1077 |||||||||||||||||||||||| |||| || ||||||||||||||||||||||| ||| Sbjct 1126 GCTGGAACTATGATTACTGGATAAGTTTGCTGTAATGGGTGATCATCAAAGTTGAGTTTT 1185 Query 1078 TTGTATTTGAGAATGCCAGTGTTTGTTAATTAGGATGTCAA 1118 |||||||||||||||||| ||||| || ||||||||||||| Sbjct 1186 TTGTATTTGAGAATGCCAATGTTTCTTCATTAGGATGTCAA 1226 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 54818995140 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5