BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486237
Length=2401
Score E
Sequences producing significant alignments: (Bits) Value
AT3G57830.1 | Symbols: | Leucine-rich repeat protein kinase fa... 3395 0.0
AT2G42290.1 | Symbols: | Leucine-rich repeat protein kinase fa... 1094 0.0
> AT3G57830.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr3:21419517-21422546 FORWARD LENGTH=2476
Length=2476
Score = 3395 bits (1838), Expect = 0.0
Identities = 2255/2445 (92%), Gaps = 74/2445 (3%)
Strand=Plus/Plus
Query 23 CCAACAC-TTTTAAGCT--CACAAGAATTCAAAAAACTTTCCCATGTCTACATTACAACC 79
||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 40 CCAACACTTTTTAAGCTCCCACAAGAATTCAAAAAACTTTCCTATGTCTACATTACAACC 99
Query 80 ACGTTGCTACTTTGG--------------AA---C-C-C-TTCGtcttcttc-t---tc- 114
||||||||||||||| || | | | |||||||||||| | ||
Sbjct 100 ACGTTGCTACTTTGGAACCCCATCACCCTAATTCCTCTCTTTCGTCTTCTTCTTCCCTCG 159
Query 115 t-tctctctct--GCAACTCCTCGTTGCATCAC-TTGCA-TGAAACATAATCTTTAGATA 169
| ||||||||| |||||||||||||||||||| || || ||||||||||||| ||||||
Sbjct 160 TCTCTCTCTCTCCGCAACTCCTCGTTGCATCACTTTACATTGAAACATAATCTGTAGATA 219
Query 170 TTAAAC-AAGT-TTCTTTCAAGATTCTGATTCTCTCCAGA-AAA-ATGCAGTttcttcga 225
|||||| |||| || || ||||||||||||||||| ||| ||| |||||||||||||||
Sbjct 220 TTAAACAAAGTCTT-TTGCAAGATTCTGATTCTCT--AGACAAATATGCAGTTTCTTCGA 276
Query 226 cttctttcacttctcctttcttcctacttgtccttcttcattagcttctcctCGTCGCTG 285
|||||| ||||||| ||||||||||||| | ||||||||| | ||||||||| || |||
Sbjct 277 CTTCTTACACTTCTTGTTTCTTCCTACTTCTTCTTCTTCATCAACTTCTCCTCCTCACTG 336
Query 286 AGTCCCGATGGTTTATCACTTCTTGCTCTCAAATCCGCCATCTTTA-AAGACCCGACACG 344
| ||| ||||| || || || ||||||||||||||||| ||| ||| ||||||||||||
Sbjct 337 AATCCAGATGGGTTGTCTCTACTTGCTCTCAAATCCGCAATC-TTACGAGACCCGACACG 395
Query 345 TGTGATGACTTCCTGGTCCGAATCCGACCCGACTCCGTGTCACTGGCCTGGAATCATCTG 404
||| |||||||||||||| || |||||||||||||| |||||||||||||||||||||||
Sbjct 396 TGTAATGACTTCCTGGTCTGAGTCCGACCCGACTCCATGTCACTGGCCTGGAATCATCTG 455
Query 405 CACTCACGGCCGAGTCACCTCACTCGTTCTTTCCGGAAGAAGACTATCAGGTTACATACC 464
||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 456 CACACATGGCCGAGTCACCTCACTCGTTCTCTCCGGAAGAAGACTCTCAGGTTACATACC 515
Query 465 CTCCGAACTTGGTTTACTCGACTCACTCATAAAACTCGACCTTGCTCGCAACAATTTCTC 524
||| |||| ||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 516 CTCTAAACTCGGTCTACTCGACTCACTCATAAAACTCGACCTTGCTCGTAACAATTTCTC 575
Query 525 AAAACCAGTTCCTACTCGTCTCTTCAACGCCGTTAATCTCCGTTACATTGATCTCTCTCA 584
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 576 AAAACCAGTGCCGACTCGTCTCTTCAACGCCGTTAATCTCCGTTACATTGATCTCTCTCA 635
Query 585 CAACTCAATCTCCGGCCCAATTCCGGCCCAAATCCAATCCATCAAGAATCTCACTCACAT 644
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 636 CAACTCAATCTCCGGCCCAATTCCGGCCCAAATCCAATCCCTCAAGAATCTCACTCACAT 695
Query 645 TGATTTCTCCTCCAATCTCCTCAACGGGTCACTCCCTGAGTCACTCACTCTACTCGGAAG 704
|||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||
Sbjct 696 TGATTTCTCCTCCAATCTACTCAACGGTTCACTCCCTCAGTCACTCACTCAACTCGGAAG 755
Query 705 CTTAGTCGGCACACTCAATCTCTCTTACAACAGATTCTCCGGCGAAATCCCGCCGTCGTA 764
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 756 CTTAGTCGGCACACTCAATCTCTCTTACAACAGTTTCTCCGGCGAAATTCCGCCGTCGTA 815
Query 765 TGGACGGTTTCCGGT-TTTCGTCAGCTTGGATCTCGGCCACAATAATCTCACCGGAAAAA 823
||| || ||||| || ||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 816 TGGCCGTTTTCCAGTCTTT-GTCAGCTTAGATCTCGGCCACAATAATCTCACCGGAAAAA 874
Query 824 TACCTCAGATTGGCTCTCTCTTAAACCAAGGACCAACCGCGTTCGCCGGAAACTCTGATC 883
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 875 TACCTCAGATTGGCTCTCTCTTAAACCAAGGACCAACAGCGTTCGCCGGAAACTCTGAGC 934
Query 884 TCTGTGGTTTCCCATTACAAAAGCTATGTAAAGAAGATA-CTACAAATCCTAAGCTCGTC 942
||||||||||||||||||| ||||| |||||||| || | ||| || ||||||||||||
Sbjct 935 TCTGTGGTTTCCCATTACAGAAGCTGTGTAAAGATGA-AGGTACGAACCCTAAGCTCGTC 993
Query 943 GCTCCAAAACCTGAAGGCTCACAAATCCTCCCGAAGAGACCAAACCCTAGCTTCATCGAC 1002
||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct 994 GCTCCAAAACCAGAAGGCTCGCAAATCCTCCCGAAGAAACCAAACCCTAGCTTCATCGAC 1053
Query 1003 AAGGACGGAAGAAAGAATAAACCGACCACCGGATCAGTAACGGTATCTCTCATCTCCGGA 1062
||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||
Sbjct 1054 AAGGACGGAAGAAAGAATAAACCGATCACCGGATCCGTAACGGTTTCTCTCATCTCCGGA 1113
Query 1063 GTCCCAATCGTAATCGGAGCTGTTTCTATCTCCGTATGGCTGATTCGAAGAAAATT--G- 1119
||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 1114 GTCTCAATCGTAATCGGAGCAGTTTCTATCTCCGTATGGCTGATTCGAAGAAAATTAAGC 1173
Query 1120 ---A--G-CA--A-ATCGGAGAGAAAGAACACGGCGGCGCCATT-G--GAT------GAT 1161
| | | | | |||| | ||| ||||||||||||||||| | ||| |||
Sbjct 1174 TCCACTGTGAGTACACCGGAAAAAAACAACACGGCGGCGCCATTGGATGATGCGGCGGAT 1233
Query 1162 GAGGAGGAGCAGGAAGGTAAATTTGTGGTGATGGACGAAGGATTCGAGCTCGAGCTCGAG 1221
||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1234 GAGGAGGAGAAGGAAGGTAAATTCGTGGTGATGGACGAAGGATTCGAGCTCGAGCTCGAG 1293
Query 1222 GATTTGCTGAGAGCATCGGCTTACGTCGTTGGAAAGAGCAGAAGTGGGATTGTGTACAGA 1281
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1294 GATTTGCTGAGAGCATCGGCTTACGTCGTCGGAAAGAGCAGAAGTGGGATTGTGTACAGA 1353
Query 1282 GTAGTGGCCGGAATGGGATCGGGTACAGTGGCGGCGACGTTTACGTCATCCGCCGTCGTT 1341
|||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||
Sbjct 1354 GTAGTGGCCGGAATGGGATCAGGTACAGTGGCGGCTACGTTTACGTCATCCACCGTCGTT 1413
Query 1342 GCTGTGAGAAGGCTCAGCGACGGAGATGCCACGTGGCGGCGGAAGGATTTCGAAAATGAA 1401
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1414 GCTGTGAGAAGGCTAAGCGACGGAGATGCCACGTGGCGGCGGAAGGATTTCGAAAATGAA 1473
Query 1402 GTGGAGGCTATAGGTAGAGTCCAACATCCAAATATCGTACGGCTAAGAGCTTATTACTAT 1461
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1474 GTGGAGGCTATAAGTAGAGTCCAACATCCAAATATCGTACGGCTAAGAGCTTATTACTAT 1533
Query 1462 GCTGAAGATGAGAGGCTCTTGATCACTGATTACATACGCAACGGGAGCTTGTACTCTGCC 1521
||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1534 GCTGAGGACGAGAGGCTCTTGATCACTGATTACATACGCAACGGCAGCTTGTACTCTGCC 1593
Query 1522 TTACATGGTGGACCTTCGAATACTCTGCCTTCACTCTCTTGGCCTGAGAGGTTACTTATT 1581
|||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||
Sbjct 1594 TTACATGGTGGACCCTCGAATACTCTGCCTTCACTCTCTTGGCCTGAAAGATTACTTATT 1653
Query 1582 GCACAAGGAACTGCTCGTGGCTTGATGTATATACATGAGTACAGCCCGAGAAAGTACGTT 1641
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1654 GCACAAGGAACAGCTCGTGGCTTGATGTATATACATGAGTACAGCCCAAGAAAGTACGTT 1713
Query 1642 CATGGCAACCTGAAATCAACCAAAATCCTGCTTGATGACGAATTACAGCCTCGCATCTCA 1701
|||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct 1714 CATGGCAACCTGAAATCAACCAAAATCCTGCTTGATGATGAATTACTGCCTCGCATCTCA 1773
Query 1702 GGCTTCGGTCTTACACGTTTGGTCTCAGGTTACTCCAAACTCACCGGTTCGCTATCCGCC 1761
||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct 1774 GGCTTCGGTCTTACACGTTTGGTATCAGGTTACTCCAAACTCATCGGTTCGCTATCCGCC 1833
Query 1762 ATAAGGCAAAGCTTAGACCAAACCTACTTAACCCCTGCTACAACGGTGACAAGAATCACA 1821
| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1834 ACAAGGCAAAGCTTAGACCAAACCTACTTAACCTCTGCTACAACGGTGACAAGAATCACA 1893
Query 1822 GCTCCCTCTGTTGCTTACCTTGCACCTGAGGCTCGAGCTTCTTCTGGTTGCAAATTATCT 1881
|||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1894 GCTCCCACTGTTGCTTACCTTGCACCTGAGGCTCGGGCTTCTTCTGGTTGCAAATTATCT 1953
Query 1882 CAGAAGTGCGATGTCTATTCGTTTGGGGTTGTCCTAATGGAGTTGTTGACTGGCCGTTTG 1941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1954 CAGAAGTGCGATGTCTATTCGTTTGGGGTTGTCCTAATGGAGTTGTTGACTGGCCGTTTG 2013
Query 1942 CCCAATGGTTCCTATAAAAACAATGGCGAAGAACTAGTGCATGTTGTGAGGAACTGGGTC 2001
||||||| ||||| ||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 2014 CCCAATGCTTCCTCTAAAAACAATGGCGAAGAACTCGTGCGTGTTGTGAGGAACTGGGTC 2073
Query 2002 AAAGAAGAGAAGCCGTTG-GCTGAGATTTTAGACCCGGAGATTCTGAACAAAGGTCACGC 2060
|| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 2074 AAGGAAGAGAAGCCGTTGAG-TGAGATTTTAGACCCGGAGATTCTGAACAAAGGTCACGC 2132
Query 2061 AGATAAGCAAGTTATTGCAGCCATTCATGTTGCCTTAAACTGCACGGAAATGGATCCAGA 2120
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 2133 AGATAAGCAAGTTATTGCAGCCATTCATGTCGCCTTGAACTGCACGGAAATGGATCCAGA 2192
Query 2121 GGTTCGTCCGAGGATGAGATCAGTGTCTGAGAGTCTCGGCCGAATCAAATCGGTCTGAGC 2180
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 2193 GGTTCGTCCGAGGATGAGATCAGTGTCTGAGAGTCTCGGCCGGATCAAATCGGACTGAGC 2252
Query 2181 TCGTTTCGAGGTAACTCAGAAAGTAAGTTAGAAATTTTGCAATTCCGTCGAGTGTAAAAT 2240
|||| ||||| ||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct 2253 ACGTT-CGAGGGAACTCAGAAAGTAAGTTAGAAATGTTGCAATTCCGTTGAGTGTAAAAT 2311
Query 2241 TCATGCACCATCATGTTTTGCTTCTCTATGAGT-G-AG-TTTT-GGCATGTTGTAGGGTT 2296
|||||||||||||||||||||||||| |||||| | | |||| ||||||||||||||||
Sbjct 2312 TCATGCACCATCATGTTTTGCTTCTCAATGAGTAGTATATTTTTGGCATGTTGTAGGGTT 2371
Query 2297 TAGGGATCCTGATCATCATGTAGTCACTCTCCTTTGTTGTACATTTGTAATAGATGAAGG 2356
|||||||| |||||||||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct 2372 TAGGGATCATGATCATCATGTAGCCACTCTCCTTTGTTATACATTTGTAACGGATGAAGG 2431
Query 2357 ACAGTACTTCATTGTTTCTTGGTTTTAACATTTAAGCCTTGACCC 2401
| ||||||| |||||||||||| |||||||| |||||||||||||
Sbjct 2432 AAAGTACTTGATTGTTTCTTGGGTTTAACATATAAGCCTTGACCC 2476
> AT2G42290.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr2:17616841-17619593 REVERSE LENGTH=2213
Length=2213
Score = 1094 bits (592), Expect = 0.0
Identities = 1599/2061 (78%), Gaps = 166/2061 (8%)
Strand=Plus/Plus
Query 183 TTTCAAGATT-CTGAT-T-CTCTCCAGAAAAATGCAGTt-tcttcgacttctttcacttc 238
|||||||||| || || | || || ||||||| |||| | |||| |||||||||||
Sbjct 93 TTTCAAGATTCCT-ATATCCTAAGCA-AAAAATGAAGTTACCATCGA-TTCTTTCACTTG 149
Query 239 tcctttcttccta-cttgtccttcttcattagcttctcctCGTCGCTGAGTCCCGATGGT 297
| |||||||| | ||| | | ||| ||| ||||| | ||| || || | | |||| |||
Sbjct 150 TTGTTTCTTCC-ATCTT-T-C-TCTGCATGAGCTTTTGCTCCTCTCTCAATTCCGACGGT 205
Query 298 TTATCACTTCTTGCTCTCAAATCCGCCATCTTTAAAGACCCGACACGTGTGATGACTTC- 356
||||| || || ||||||||||||||| || ||| |||||||| || || ||||| |
Sbjct 206 TTATCTCTCCTAGCTCTCAAATCCGCCGTCGATAACGACCCGACCCGAGTAATGAC-CCA 264
Query 357 CTGGTCCGAATCCGACCCGACTCCGTGTCACTGG-CCTGGAATCATCTGCACTCACGGCC 415
|||||| ||||||||||||||||| || || ||| || |||||| ||||||| ||||||
Sbjct 265 CTGGTCTGAATCCGACCCGACTCCTTGCCATTGGTCC-GGAATCGTCTGCACAAACGGCC 323
Query 416 GAGTCACCTCACTCGTTCT-TTCCGGAAGAAGACTATCAGGTTACATACCCTCCGAACTT 474
||||||| | || || || || ||||| ||| || || |||||||| || || |||||
Sbjct 324 GAGTCACAACTCTTGTACTCTT-CGGAAAAAGTCTCTCCGGTTACATTCCATCAGAACTC 382
Query 475 GGTTTACTCGACTCACTCATAA--AACTCGACCTTGCTCGCAACAATTTCTC-AAAACCA 531
||||||||| |||| || | || || || || |||| |||||||||||| |||||||
Sbjct 383 GGTTTACTCAACTCGCT-A-AACCGGCTTGATCTAGCTCACAACAATTTCTCTAAAACCA 440
Query 532 GTTCCTACTCGTCTCTTC-AACGCCGTTAATCTCCGTTACATTGATCTCTCTCACAACTC 590
| || |||||||||| || || || ||||| ||||| |||||||||||||||||
Sbjct 441 -TACCGGTTCGTCTCTTCGAA-GCAACCAAGCTCCGGTACATCGATCTCTCTCACAACTC 498
Query 591 AATCTCCGGCCCAATTCCGGCCCAAATCCAA-TCCATCAAG-AATCTC-ACTCACATTGA 647
| ||||||||||||| ||||||||||| ||| ||||| ||| | ||| || ||| ||||
Sbjct 499 ACTCTCCGGCCCAATACCGGCCCAAAT-CAAGTCCATGAAGTCA-CTCAAC-CACCTTGA 555
Query 648 TTTCTCCTCCAATC-TCCTCAACGGGTCACTCCCTGAGTCACTCACTCTACTCGGAAGCT 706
|||||||||||||| | |||||||| ||||||||||||||||||||| ||||||||||
Sbjct 556 TTTCTCCTCCAATCAT-CTCAACGGTTCACTCCCTGAGTCACTCACTGAACTCGGAAGCC 614
Query 707 TAGTCGGCACAC-TCAATCTCTCTTACAA-CAGATTCTCCGGCGAAATCCCGCCGTCGTA 764
| ||||| || | | ||| |||||| ||| || |||| ||||||| || || ||||||||
Sbjct 615 TCGTCGGAAC-CTTGAATTTCTCTTTCAACCA-ATTCACCGGCGAGATTCCACCGTCGTA 672
Query 765 TGGACGGTTTCCG-GTTTTCGTCAGCTTGGATCTCGGCCACAATAATCTCACCGGAAAAA 823
|| || ||| || ||| ||||||||| ||| | | ||||| |||||||||||||||
Sbjct 673 CGGTCGATTT-CGAGTTCACGTCAGCTTAGATTTTAGTCACAACAATCTCACCGGAAAAG 731
Query 824 TACCTCAGATTGGCTCTCTCTTAAACCAAGGACCAACCGCGTTCGCCGGAAACTCTGATC 883
|||||||| | || ||||| || || |||||||||| ||| ||||| ||||||||| |||
Sbjct 732 TACCTCAGGTGGGATCTCTGTTGAATCAAGGACCAAACGCATTCGCTGGAAACTCTCATC 791
Query 884 TCTGTGGTTTCCCATTACAAAAGCTATGT-AAAGAAGATACTACAAA-TCCTAAGCTCGT 941
||||||| |||||||| |||| || ||| ||| || || | | ||| || || ||||
Sbjct 792 TCTGTGGCTTCCCATTGCAAACGCCGTGTGAAA-AA-AT-C-A-AAACCCCAAATTTCGT 846
Query 942 CGCTCCAAAACCTGAAGGCT-CACAA-ATCCTCCCGAAGAGACCAAACCCTAGCT-TCAT 998
|||| |||| || ||||| | | ||| | || || ||| |||||||||||| | | ||
Sbjct 847 CGCTGCAAAGCCGGAAGG-TACTCAAGA-ACT-CC--AGAAACCAAACCCTAG-TGTAAT 900
Query 999 CGA-CAA-G--GACG-GAA-GA-AAGAATAAACCGACCACCGGATCAGTAACGGTATCTC 1051
| | ||| | |||| || || ||||| | | || |||||| |||||||| || ||||
Sbjct 901 C-AGCAATGACGACGCAAAGGAGAAGAAGCAGCAGATCACCGGTTCAGTAACCGTTTCTC 959
Query 1052 TCATCTCCGGAGTCCCAATCGTAATCGGAGCTGTTTCTATCTCCGTATGGCTGATTC-GA 1110
| || || ||||| | | |||||||||||||||||| |||| ||||||||||| | ||
Sbjct 960 TGATTTCTGGAGTTTCGGTTGTAATCGGAGCTGTTTCTCTCTCTGTATGGCTGATCCGGA 1019
Query 1111 -AGAA--AA--T----TGAG--CAAATCGGAGAGAAAGAAC-ACGGCGGCGCCATT--G- 1155
| || || | || | ||| ||||||| |||| || ||| ||| | || |
Sbjct 1020 GAAAACGAAGCTCCGATGGGTACAATTCGGAGACAAAG-ACGACGACGGTG-GTTTCAGA 1077
Query 1156 GAT-GATG-AGGAGGAGCAGGAAGGTAAATTTGTGGTGATGGACGAAGGATTCGAGCTCG 1213
| | || | || ||| ||| ||||||||||| || | | | || |||||||||||||| |
Sbjct 1078 GTTCGACGAAGAAGG-GCAAGAAGGTAAATTCGTAGCGTTTGATGAAGGATTCGAGCTTG 1136
Query 1214 AGCTCGAGGATTTGCTGAGAGCATCGGCTTACGTCGTT-GGAAAGAGCAGAAGTGGGATT 1272
|||| ||||||||||||||||||||||||||||| | | || ||||||||||| ||||||
Sbjct 1137 AGCTTGAGGATTTGCTGAGAGCATCGGCTTACGT-GATAGGCAAGAGCAGAAGCGGGATT 1195
Query 1273 GTGTACAGAGTAGTGGCCGGAATGGGATCGGGTACAGTGGCGGCGAC-GTTTACGTCATC 1331
||||| ||||||||||| || || |||| | | | | | || ||| |||
Sbjct 1196 GTGTATAGAGTAGTGGC-GGC--GGAATCG--TCC--T--C--C-ACCGTT---GTC--- 1237
Query 1332 CGCCGTCGTTGCTGTGAGAAGGCTCAGCGACGG-AGATGCCACGTGGCGGCGGAAGGATT 1390
||||| | ||||||||||||||||| | ||| ||||||||| |||||||
Sbjct 1238 -GCCGT--T-------AGAAGGCTCAGCGACGGCA-ATGACACGTGGCGATTTAAGGATT 1286
Query 1391 TCGAAAATGAAGTGGAG-GCTATAGGTAG-AGTCCAA-CATCCAAATATCGTACGGCTAA 1447
| | |||||||| ||| || || ||||| | || || ||||| || || ||||||||||
Sbjct 1287 TTGTGAATGAAGTTGAGAGC-ATTGGTAGGA-TC-AATCATCCTAACATTGTACGGCTAA 1343
Query 1448 GAGCTTATTACTATGCTGAAGATGAGAGGCT-CTTGATCACTGATTACAT-ACGCAACGG 1505
||||||| |||||||| || || |||| ||| || |||||||||| ||| | ||| ||
Sbjct 1344 GAGCTTACTACTATGCAGAGGACGAGAAGCTTCTC-ATCACTGATTTCATTAA-CAATGG 1401
Query 1506 GAGCTTGTACTCTGCCTTACATGGTGGACCTTCGAATACTCTGCCTTCACTCTCTTGGCC 1565
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |
Sbjct 1402 CAGCTTGTACTCTGCCTTACATGGTGGACCTTCGAATACTCGGCCTACACTCTCTTGGGC 1461
Query 1566 TGAGAGGTTACT-TATTGCACAAGGAACTGCTCGTGGCTTGATGTATATACATGAGTACA 1624
|||||||||| | ||| || ||||| |||||||| || ||||||||||||||||| ||||
Sbjct 1462 TGAGAGGTTA-TGTATAGCTCAAGGGACTGCTCGGGGTTTGATGTATATACATGAATACA 1520
Query 1625 GCCCGAGAAAGTACGTTCATGGCAACCTGAAATCAACCAAAATCCTGCTT-GATGACGAA 1683
| |||||||||| ||||| |||||||| ||||||| |||||||||| || ||| | ||
Sbjct 1521 GTTCGAGAAAGTATGTTCACGGCAACCTAAAATCAAGCAAAATCCTG-TTAGATAATGAG 1579
Query 1684 TTACAGCCTCGCATCTCAGGCTTCGGTCTTACACGTTTGGTCTCAGGTTACTCC-AAACT 1742
| || |||| | ||||||| || ||||| ||||| |||| || || || ||| ||| |
Sbjct 1580 CTGCATCCTCACGTCTCAGGATTTGGTCTCACACGACTGGTTTCCGGCTA-TCCCAAAGT 1638
Query 1743 CACCGG---TTCGCTATCCGCCATAAGGCAAAGCT-TAGACCAAACCTACTTAACCCCTG 1798
||| | ||| ||||| |||| | |||||| | |||||||| | || ||
Sbjct 1639 CACTGACCATTCACTATCATCCATGACGCAAAG-TATAGACCAAGG--A-TT------TG 1688
Query 1799 CTACAACGG-TGACAAGAATCACAGCTCCCT-CTGTTGCTTACCTTGCACCTGAGGCTCG 1856
| |||| | | || | || ||||||| | | | ||||||||||||||| || || ||
Sbjct 1689 CCACAA-GACTCTCA-G--TCTCAGCTCC-TGCAGCTGCTTACCTTGCACCCGAAGCCCG 1743
Query 1857 AGCTTCTTCTGGTTGCAAATTATCTCAGAAGTGCGATGTCTATTCGTTTGGGGTTG-TCC 1915
||||||||||| ||||||||||||||| || |||||||| ||||| ||||| || | | |
Sbjct 1744 AGCTTCTTCTGATTGCAAATTATCTCACAAATGCGATGTTTATTCTTTTGGTGT-GATTC 1802
Query 1916 TAATGGAGTTGTTGACTGGCCGTTTGCCCAATGGTTCCTATAAAAAC-AATG-GC-GAAG 1972
|| ||||| |||||||||| || || || ||||||||| | ||||| || | | ||||
Sbjct 1803 TATTGGAGCTGTTGACTGGTCGATTACCTTATGGTTCCTCTGAAAACGAAGGAGAAGAAG 1862
Query 1973 AACTAGTGCATGTTGTGAGGAACTGGGTCAAAGAAGAGA-AGCCGTTGGCTGAGATTTTA 2031
|||| ||| ||||| ||||||| ||| ||| ||||||| | | ||||||||||| |||
Sbjct 1863 AACTCGTGAATGTTTTGAGGAAGTGGCACAAGGAAGAGAGATCT-TTGGCTGAGATCTTA 1921
Query 2032 GACCCGGAGATTCTGAACAAAGG-TCACGCAGA-TAAGCAAGTTATTGCAGCCATTCATG 2089
||||| || ||||||| | ||| | || || |||||| ||||||||| |||| ||||
Sbjct 1922 GACCCAAAGCTTCTGAA-ACAGGATTTTGC-GAATAAGCAGGTTATTGCAACCATCCATG 1979
Query 2090 TTGCCTTAAACTGCACGGAAATGGATCCAGAGGTTCGTCCGAGGATGAGATCAGTGTCTG 2149
| || |||||||||||||||||||||||||| | ||||| ||||||||||| |||||||
Sbjct 1980 TCGCTTTAAACTGCACGGAAATGGATCCAGATATGCGTCCTAGGATGAGATCTGTGTCTG 2039
Query 2150 AGAGTCTCGGCCGAATCAAAT 2170
| | ||| || || |||||||
Sbjct 2040 AAATTCTAGGTCGGATCAAAT 2060
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 119226294375
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5