BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486240
Length=2821
Score E
Sequences producing significant alignments: (Bits) Value
AT3G57880.1 | Symbols: | Calcium-dependent lipid-binding (CaLB... 4071 0.0
AT1G51570.1 | Symbols: | Calcium-dependent lipid-binding (CaLB... 2529 0.0
> AT3G57880.1 | Symbols: | Calcium-dependent lipid-binding (CaLB
domain) plant phosphoribosyltransferase family protein |
chr3:21430983-21434600 REVERSE LENGTH=2960
Length=2960
Score = 4071 bits (2204), Expect = 0.0
Identities = 2532/2685 (94%), Gaps = 44/2685 (2%)
Strand=Plus/Plus
Query 80 TACTTGTCTTCTTCTCTTTTTTAA---AAAATGAAATTTAA-TTTGGGTTG-AAAAAACG 134
|||||||||||||||| | ||||| || |||||||| ||||||||| ||||||||
Sbjct 157 TACTTGTCTTCTTCTC-TCTTTAATTTTTTAT-AAATTTAATTTTGGGTTGAAAAAAACG 214
Query 135 AGGAAGAAGAGAGGAGA-GTG-CTTGACTCTTTTCTTATTTAATTAT---GGAGGAGA-- 187
||||||||||||||||| | | | | |||||| |||||| |||| ||||||||
Sbjct 215 AGGAAGAAGAGAGGAGAGGAGAC-TCTTTCTTTTAGTATTTATTTATGGAGGAGGAGAGG 273
Query 188 AGACTGTC-TAA-----T-C-GGTCTCTTATTCTGATCCATGCTTCTTCTGTATA-AT-A 237
|||||||| ||| | | |||||||||||||||||||| |||| ||| | | | |
Sbjct 274 AGACTGTCTTAATCGTTTCCGGGTCTCTTATTCTGATCCATTCTTC-TCTCAAGATCTAA 332
Query 238 GTTTTTTCTTGA-TTTGAAGTGGAGAAGAAAGTAGCTGTGTTCTC-A-AATCCAC-CTAG 293
| ||| | ||| |||||||||||||||||| ||| | || |||| | || || | ||||
Sbjct 333 G-ATTTAC-TGATTTTGAAGTGGAGAAGAAATTAG-T-TG-TCTCGACAAACCCCACTAG 387
Query 294 GAACTTTGTTTA--GTGTCTTCTTAAAGCCTGCAAGATGCAGAGACCACCTCCTGAAGAT 351
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 388 AAACTTTGTTTAGTGTGTCTTCTTAAAGCCTGCAAGATGCAGAGACCACCTCCTGAAGAT 447
Query 352 TTCTCCTTGAAGGAGACGAGACCTCATCTCGGTGGAGGAAAAATCTCTGGAGATAAGCTG 411
||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct 448 TTCTCCTTGAAGGAGACGAGACCTCATCTAGGTGGAGGAAAACTCTCTGGAGATAAGCTT 507
Query 412 ACCAGCACTTATGACCTCGTGGAGCAGATGCAGTATCTTTATGTCCGAGTGGTTAAGGCA 471
||||| ||||||||||| || ||||| ||||||||||| ||||| || ||||||||||||
Sbjct 508 ACCAGTACTTATGACCTTGTTGAGCAAATGCAGTATCTCTATGTTCGTGTGGTTAAGGCA 567
Query 472 AAGGAGTTACCTGGGAAGGATATGACTGGTAGTTGTGACCCTTATGTTGAGGTTAAGCTT 531
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 568 AAGGAGTTACCTGGCAAGGATATGACTGGTAGTTGTGACCCTTATGTTGAGGTTAAGCTT 627
Query 532 GGAAACTACAAAGGAACCACTAGACATTTCGAGAAGAAATCTAATCCTGAGTGGAACCAA 591
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 628 GGAAACTACAAAGGCACCACTAGGCATTTCGAGAAGAAATCTAATCCTGAGTGGAACCAA 687
Query 592 GTTTTCGCCTTTTCTAAAGATAGGATTCAAGCTTCTTTCCTTGAAGCTACTGTCAAGGAC 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 688 GTTTTCGCCTTTTCTAAAGATAGGATTCAAGCTTCTTTCCTTGAAGCTACTGTCAAGGAC 747
Query 652 AAGGATGTTGTGAAAGATGATTTGATTGGTCGGGTTGTGTTTGATTTGAATGAGGTACCT 711
|||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 748 AAGGATTTTGTCAAAGATGATTTGATTGGTCGGGTTGTCTTTGATTTGAATGAGGTACCT 807
Query 712 AAGAGAGTTCCTCCTGATAGTCCCTTGGCCCCGCAATGGTATAGGCTCGAGGATAGGAAA 771
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 808 AAGAGAGTTCCTCCTGATAGTCCCTTGGCTCCGCAATGGTATAGGCTCGAGGATAGGAAA 867
Query 772 GGTGATAAAGTCAAGGGAGAGCTTATGCTGGCTGTTTGGTTTGGTACTCAAGCTGATGAA 831
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 868 GGTGATAAAGTCAAGGGAGAGCTTATGTTGGCTGTTTGGTTTGGTACTCAAGCTGATGAA 927
Query 832 GCCTTCCCTGAAGCTTGGCACTCTGATGCTGCAACTGTTAGTGGTACTGATGCTCTTGCC 891
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 928 GCTTTCCCTGAAGCTTGGCACTCTGATGCTGCAACTGTTAGTGGTACTGATGCTCTTGCC 987
Query 892 AACATCCGTTCCAAGGTTTATCTTTCTCCTAAGCTTTGGTACCTCAGGGTTAATGTAATT 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 988 AACATCCGTTCCAAGGTTTATCTTTCTCCTAAGCTTTGGTACCTCAGGGTTAATGTAATT 1047
Query 952 GAAGCTCAAGATTTGATACCAAGTGATAAGCAAAGATATCCTGAGGTTTATGTGAAGGCT 1011
|||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct 1048 GAAGCTCAAGATTTGATACCAACTGATAAGCAAAGATATCCCGAGGTTTATGTGAAGGCT 1107
Query 1012 ATAGTGGGAAACCAGGCGTTGAGGACTAGAGTATCACAGAGCAGGACTCTTAATCCGATG 1071
||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||
Sbjct 1108 ATAGTGGGAAACCAGGCGTTGAGGACTAGAGTATCGCAGAGCAGGACTATTAATCCCATG 1167
Query 1072 TGGAATGAGGATTTGATGTTTGTAGCGGCAGAACCATTTGAGGAACCTTTGATCCTCAGC 1131
||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||
Sbjct 1168 TGGAATGAGGATTTGATGTTTGTCGCAGCAGAGCCATTTGAGGAACCTTTGATCCTCAGC 1227
Query 1132 GTGGAAGACAGAGTTGCTCCTAACAAAGATGAAGTCTTGGGGAGATGTGCGATCCCGTTG 1191
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1228 GTGGAAGATAGAGTTGCTCCAAACAAAGATGAAGTCTTGGGGAGATGTGCGATCCCGTTG 1287
Query 1192 CAGTATTTGGACAGAAGATTTGACCACAAACCAGTGAACAGCAGGTGGTATAACCTCGAG 1251
|||||||||||||||||||||||||| ||||| ||||||||||||||||| || ||||||
Sbjct 1288 CAGTATTTGGACAGAAGATTTGACCATAAACCGGTGAACAGCAGGTGGTACAATCTCGAG 1347
Query 1252 AAGCATATTATGGTCGATGGAGAGAAGAAGGAGACCAAATTCGCTAGCAGGATTCACATG 1311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1348 AAGCATATTATGGTCGATGGAGAGAAGAAGGAGACCAAATTCGCTAGCAGGATTCACATG 1407
Query 1312 AGAATCTGTTTAGAAGGAGGGTATCACGTTCTTGATGAGTCTACGCATTACAGTAGTGAT 1371
||||| ||||| |||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct 1408 AGAATATGTTTGGAAGGAGGGTATCACGTTCTCGATGAGTCTACGCATTACAGCAGTGAT 1467
Query 1372 CTTAGACCAACGGCGAAACAACTATGGAAGCCTAATATCGGTGTGCTGGAGTTGGGGATA 1431
||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 1468 CTTAGACCAACAGCGAAGCAACTATGGAAGCCTAATATCGGTGTACTGGAGTTGGGGATA 1527
Query 1432 CTAAATGCGACAGGTCTAATGCCTATGAAAACTAAAGACGGTAGGGGAACCACAGATGCA 1491
|| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||||
Sbjct 1528 CTGAATGCTACAGGTCTGATGCCTATGAAAACCAAAGACGGCCGGGGAACCACAGATGCA 1587
Query 1492 TATTGTGTGGCAAAGTATGGACAGAAATGGATTCGAACTCGGACAATCATTGACAGCTTT 1551
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1588 TATTGTGTGGCGAAGTACGGACAGAAATGGATTCGAACTCGGACAATCATTGACAGCTTT 1647
Query 1552 ACCCCAAGATGGAACGAGCAATATACTTGGGAGGTTTTTGATCCGTGTACTGTTGTTACT 1611
|| ||||||||||| |||||||||||||||||||||||||||||||| || |||||||||
Sbjct 1648 ACACCAAGATGGAATGAGCAATATACTTGGGAGGTTTTTGATCCGTGCACCGTTGTTACT 1707
Query 1612 GTTGGAGTTTTTGATAACTGCCATCTCCATGGAGGTGAGAAGAATGGAGGAGCAAAAGAT 1671
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1708 GTTGGAGTTTTTGATAACTGCCATCTCCATGGAGGTGAGAAGATTGGAGGAGCAAAAGAT 1767
Query 1672 TCAAGAATTGGGAAGGTAAGAATCAGGCTTTCTACTCTCGAGACTGATCGAGTTTACACA 1731
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1768 TCAAGAATCGGGAAGGTAAGAATCAGGCTTTCTACTCTCGAGACTGATCGAGTTTATACA 1827
Query 1732 CATTCATACCCTCTTTTGGTGCTCCATCCTAACGGAGTCAAGAAAATGGGAGAAATTCAC 1791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1828 CATTCATACCCTCTTTTGGTGCTCCATCCTAACGGAGTCAAGAAAATGGGAGAAATTCAC 1887
Query 1792 TTGGCTGTGAGGTTCACTTGCTCTTCATTGCTCAACATGATGTATATGTACTCACTGCCT 1851
|| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1888 TTAGCTGTGAGATTCACTTGCTCTTCATTGCTCAACATGATGTATATGTACTCACAGCCT 1947
Query 1852 CTCTTACCGAAGATGCATTACATCCATCCTCTAACTGTTAGCCAGCTTGATAACTTGAGG 1911
|||||||||||||||||||| |||||||| || || ||||||||||||||||||||||||
Sbjct 1948 CTCTTACCGAAGATGCATTATATCCATCCACTGACGGTTAGCCAGCTTGATAACTTGAGG 2007
Query 1912 CATCAAGCGACTCAGATTGTATCGATGAGGTTGACCCGAGCAGAACCGCCTCTAAGGAAA 1971
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct 2008 CATCAAGCGACTCAGATTGTATCGATGAGGCTGACCCGAGCAGAACCACCTCTAAGGAAA 2067
Query 1972 GAAGTAGTTGAGTATATGCTTGATGTGGGTTCTCACATGTGGAGTATGCGGAGAAGCAAA 2031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2068 GAAGTAGTTGAGTATATGCTTGATGTGGGTTCTCACATGTGGAGTATGCGGAGAAGCAAA 2127
Query 2032 GCAAACTTTTTCAGGATTATGGGAGTTTTGAGTGGGTTAATCGCAGTAGGAAAATGGTTT 2091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2128 GCAAACTTTTTCAGGATTATGGGAGTTTTGAGTGGGTTAATCGCAGTAGGAAAATGGTTT 2187
Query 2092 GAACAGATCTGCAACTGGAAGAATCCGATCACAACAGTCTTGATCCATCTCTTGTTCATC 2151
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2188 GAACAAATCTGCAACTGGAAGAATCCAATCACAACAGTCTTGATCCATCTCTTGTTCATC 2247
Query 2152 ATCCTTGTGCTCTATCCCGAACTAATCTTGCCCACCATCTTCCTCTACCTCTTCCTCATC 2211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2248 ATCCTTGTGCTCTATCCCGAACTAATCTTGCCCACCATCTTCCTCTACCTCTTCCTCATC 2307
Query 2212 GGTGTCTGGTATTACCGTTGGAGACCGAGGCATCCTCCTCACATGGACACACGTCTCTCT 2271
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2308 GGTATCTGGTACTACCGTTGGAGACCGAGGCATCCTCCTCACATGGACACACGTCTCTCT 2367
Query 2272 CACGCTGACTCAGCCCACCCCGACGAGCTAGATGAAGAGTTCGACACTTTTCCTACTTCC 2331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2368 CACGCTGACTCAGCCCACCCCGACGAGCTAGATGAAGAGTTCGACACTTTTCCTACTTCC 2427
Query 2332 CGACCATCAGACATTGTTAGGATGAGGTATGACAGGTTGAGGAGTATTGCTGGGAGGATT 2391
|||||||| ||||| || ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2428 CGACCATCTGACATAGTCAGGATGAGGTATGACAGGTTGAGGAGTATTGCTGGTAGGATT 2487
Query 2392 CAGACAGTGGTAGGTGATCTTGCAACACAAGGAGAAAGGCTTCAGTCTCTGCTAAGCTGG 2451
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 2488 CAGACAGTGGTAGGTGATCTAGCAACTCAAGGAGAAAGGCTTCAGTCTCTGCTAAGCTGG 2547
Query 2452 CGTGATCCGCGTGCGACAGCACTCTTCGTCTTGTTCTGCTTGATTGCCGCAGTTATTCTC 2511
|||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 2548 CGTGATCCGCGTGCAACAGCGCTCTTCGTCTTGTTCTGCTTGATTGCCGCAGTCATTCTC 2607
Query 2512 TATGTGACACCTTTCCAGGTTGTGGCTCTTTGTATTGGAATCTATGTTCTGAGACATCCG 2571
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2608 TATGTGACACCTTTCCAGGTTGTGGCTCTTTGTATTGGAATCTATGCTCTGAGACATCCG 2667
Query 2572 AGGTTCAGATACAAACTACCATCTGTTCCTCTCAATTTCTTCAGGAGGCTTCCTGCAAGA 2631
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 2668 AGGTTCAGATACAAACTACCATCCGTTCCTCTCAATTTCTTCAGAAGGCTTCCTGCAAGA 2727
Query 2632 ACTGATTGCATGCTCTGACCTGGAAAAACTGCTTCCAATCCCAAAGAAAA-TGCCTCCA- 2689
|||||||||||||||||||||| |||||||||||||||| || ||||||| | | | |
Sbjct 2728 ACTGATTGCATGCTCTGACCTGCAAAAACTGCTTCCAATACCGAAGAAAACTTC-TATAA 2786
Query 2690 GACTTGTTAGTTTGTT---GTTAAAAATGTCATGATGACTCTTTT 2731
||||||| |||||||| ||||||||| ||||||||||||||||
Sbjct 2787 GACTTGT-AGTTTGTTCTTGTTAAAAATATCATGATGACTCTTTT 2830
Score = 185 bits (100), Expect = 2e-45
Identities = 112/118 (95%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 2704 TTGTTAAAAATGTCATGATGACTCTTTTCTTGTTGATGGTTATGATGTCTCCGTTTGTCT 2763
|||||||||||||||||||||||||||||||| ||||||| ||||||| ||||| |||||
Sbjct 2842 TTGTTAAAAATGTCATGATGACTCTTTTCTTGGTGATGGTGATGATGTATCCGTCTGTCT 2901
Query 2764 TTTAGCATTATTAAGACTTTTGTTTAAAAGTAGTAAAGAAGTATCTTGTGTGGTTTTG 2821
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2902 TTTAACATTATTAAGACTTTTGTTTGAAAGTAGTAAAGAAGTATCTTGTGTGGTTTTG 2959
> AT1G51570.1 | Symbols: | Calcium-dependent lipid-binding (CaLB
domain) plant phosphoribosyltransferase family protein |
chr1:19122170-19124688 REVERSE LENGTH=2519
Length=2519
Score = 2529 bits (1369), Expect = 0.0
Identities = 2032/2351 (86%), Gaps = 49/2351 (2%)
Strand=Plus/Plus
Query 328 ATGCAGAGACCACCTCCTGAAGATTTCTCCTTGAAGGAGACGAGACCTCATCTCGGTGGA 387
|||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||
Sbjct 1 ATGCAGAGACCACCTCCTGAAGATTTCTCCTTAAAGGAGACAAAACCTCATCTCGGTGGA 60
Query 388 GGAAAAATCTCTGGAGATAAGCTGACCAGCACTTATGACCTCGTGGAGCAGATGCAGTAT 447
|| ||| || | ||||||||||| || | ||| ||||||||||| ||||| |||||||||
Sbjct 61 GGCAAAGTCACCGGAGATAAGCTCACAACCACATATGACCTCGTCGAGCAAATGCAGTAT 120
Query 448 CTTTATGTCCGAGTGGTTAAGGC-AAAGGAGTTACCTGGGAAGGA-TATGACTGGTAGTT 505
|| ||||| || || || ||||| ||| || ||||| || || || | | ||||||||||
Sbjct 121 CTCTATGTTCGTGTCGTAAAGGCTAAA-GAATTACCAGGTAAAGACT-TAACTGGTAGTT 178
Query 506 GTGACCCTTATGTTGAGGTTAAGCTTGGAAACTACAAAGGAACCACTAGACATTTCGAGA 565
|||||||||| ||||| ||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 179 GTGACCCTTACGTTGAAGTTAAGCTTGGTAACTACAGAGGAACCACTAGACATTTCGAGA 238
Query 566 AGAAATCTAATCCTGAGTGGAACCAAGTTTTCGCCTTTTCTAAAGATAGGATTCAAGCTT 625
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 239 AGAAATCTAATCCTGAGTGGAACCAAGTTTTCGCCTTTTCTAAAGATAGGGTACAAGCTT 298
Query 626 CTT-TCCTTGAAGCTACTGTCAAGGACAAGGATGTT-GTGAAAGATGATTTGATTGGTCG 683
||| || ||||||||||||||||||| || ||| || || ||||||||||||||||||||
Sbjct 299 CTTATC-TTGAAGCTACTGTCAAGGATAAAGAT-TTAGTTAAAGATGATTTGATTGGTCG 356
Query 684 GGTTGTGTTTGATTTGAATGAGGTACCTAAGAGAGTTCCTCCTGATAGTCCCTTGGCCCC 743
||||||||||||||||||||| |||||||||||||||||||||||||||| || || ||
Sbjct 357 TGTTGTGTTTGATTTGAATGAGATACCTAAGAGAGTTCCTCCTGATAGTCCTTTAGCTCC 416
Query 744 GCAATGGTATAGGCTCGAGGATAGGAAAGGTGATAAAGTCAAGGGAGAGCTTATGCTGGC 803
||||||||||| | || ||| ||||||| | ||||| || |||||||||||| | ||
Sbjct 417 ACAATGGTATAGATTAGAAGATGGGAAAGGCCAAAAAGTTAAAGGAGAGCTTATGTTAGC 476
Query 804 TGTTTGGTTTGGTACTCAAGCTGATGAAGCCTTCCCTGAAGCTTGGCACTCTGATGCTGC 863
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 477 TGTTTGGTTTGGTACTCAAGCTGATGAAGCTTTTCCTGAAGCTTGGCACTCTGATGCTGC 536
Query 864 AACTGTTAGTGGTACTGATGCTCTT-GCCAACATCCGTTCCAAGGTTTATCTTTCTCCTA 922
|||||||||||| ||||||||| || || |||||| | || ||||||||||| |||||||
Sbjct 537 AACTGTTAGTGGAACTGATGCT-TTAGCTAACATCAGATCTAAGGTTTATCTCTCTCCTA 595
Query 923 AGCTTTGGTACCTCAGGGTTAATGTAATTGAAGCTCAAGATTTGATACCAAGTGATAA-G 981
|||||||||| || ||||||||||| ||||||||||| ||||||||||| || ||||| |
Sbjct 596 AGCTTTGGTATCTTAGGGTTAATGTCATTGAAGCTCAGGATTTGATACCGAGCGATAAAG 655
Query 982 CAAAGATATCCTGAGGT-TTATGTGAAGGCT-ATAGTGGGAAACCAGGCGTTGAGGACTA 1039
| |||||||||| || || |||||| | | ||| ||||||| ||||| ||||||||||
Sbjct 656 GGA-GATATCCTGAAGTCTT-TGTGAAAG-TGATAATGGGAAATCAGGCATTGAGGACTA 712
Query 1040 GAGTATCACAGAGCAGGACTCTTAATCCGATGTGGAATGAGGATTTGATGTTTGTAGCGG 1099
|||| ||||| ||||||| | |||||||||||||||||||||||||||||||||| | |
Sbjct 713 GAGTGTCACAAAGCAGGAGTATTAATCCGATGTGGAATGAGGATTTGATGTTTGTTGTAG 772
Query 1100 CAGAACCATTTGAGGAACCTTTGATCCTCAGCGTGGAAGACAGAGTTGCTCCTAACAAAG 1159
| || || ||||| || |||||||| || || |||||||| |||||||| || || ||||
Sbjct 773 CTGAGCCGTTTGAAGAGCCTTTGATTCTAAGTGTGGAAGATAGAGTTGCGCCGAATAAAG 832
Query 1160 ATGAAGTCTTGGGGAGATGTGCGATCCCGTTGCAGTATTTGGACAGAAGATTTGACCACA 1219
||||||||||||||||||| ||| | ||||||||||||||||||| ||| |||||| | |
Sbjct 833 ATGAAGTCTTGGGGAGATGCGCGGTTCCGTTGCAGTATTTGGACAAAAGGTTTGACTATA 892
Query 1220 AACCAGTGAACAGCAGGTGGTATAACCTCGAGAAGCATATTATGGTCGATGGAG-AGA-A 1277
||| |||||||||||||||| |||||| ||||||||| |||| | || |||| ||| |
Sbjct 893 GACCGGTGAACAGCAGGTGGTTTAACCTTGAGAAGCATGTTATAATGGAAGGAGGAGAGA 952
Query 1278 -GAAGGAGACCAAATTCGCTAGCAGGATTCACATGAGAATCTGTTTAGAAGGAGGGTATC 1336
||| |||| ||||||||| |||| ||| |||||||| || ||||| |||||||||||||
Sbjct 953 AGAAAGAGATCAAATTCGCCAGCAAGATCCACATGAGGATTTGTTTGGAAGGAGGGTATC 1012
Query 1337 ACGTTCTTGATGAGTCTACGCATTACAGTAGTGATCTTAGACCAACGGCGAAA-CAACTA 1395
| || |||||||||||||| |||||||||||||| || |||||||| || ||| |||||
Sbjct 1013 ATGTGCTTGATGAGTCTACACATTACAGTAGTGACCTAAGACCAACTGC-AAAGCAACTG 1071
Query 1396 TGGAAGCCTAATATCGGTGTGCTGGAGTT-GGGGATACT-AAATGCGACAGGTCTAATGC 1453
||||||||||| ||||||||||| ||| | |||| | || ||||||||| ||| ||||||
Sbjct 1072 TGGAAGCCTAACATCGGTGTGCTTGAGCTAGGGG-T-CTTAAATGCGACCGGTTTAATGC 1129
Query 1454 CTATGAAAACTAAAGACGGT---AGGGGAACCACAGATGCATATTGTGTGGCAAAGTATG 1510
| |||||| ||||||| ||| ||||||||||| || || |||||||||||||||||||
Sbjct 1130 CCATGAAAGCTAAAGAAGGTGGTAGGGGAACCACGGACGCGTATTGTGTGGCAAAGTATG 1189
Query 1511 GACAGAAATGGATTC-GAACTCGGACAATCATTGACAGCTTTACCCCAAGATGGAACGAG 1569
| ||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1190 GGCAGAAATGGAT-CAGAACTCGGACAATTATTGACAGCTTTACCCCAAGATGGAACGAG 1248
Query 1570 CAATATACTTGGGAGGTTTTTGATCCGTGTACTGTTGTTACTGTTGGAGTTTTTGATAAC 1629
||||||||||||||||||||||||||||||||||| ||||| ||||| || || ||||||
Sbjct 1249 CAATATACTTGGGAGGTTTTTGATCCGTGTACTGTAGTTACAGTTGGTGTGTTCGATAAC 1308
Query 1630 TGCCATCTCCATGGAGGTGAGAAGAAT---GGAGGAGCAAAAGATTCAAGAATTGGGAAG 1686
|||||||| || || ||||| || || ||||||| |||||||||||||||||| |||
Sbjct 1309 TGCCATCTACACGGTGGTGACAAAAACAACGGAGGAGGAAAAGATTCAAGAATTGGAAAG 1368
Query 1687 GTAAGAATCAGGCTTTCTACTCTCGAGACTGATCGAGTTTACACACATTCATACCCTCTT 1746
|| || || ||||| |||||||||||| |||||||||| |||||||||||||| ||||||
Sbjct 1369 GTGAGGATAAGGCTCTCTACTCTCGAGGCTGATCGAGTCTACACACATTCATATCCTCTT 1428
Query 1747 TTGGTGCTCCATCCTAACGGAGTCAAGAAAATGGGAGAAATTCACTTGGCTGTGAGGTTC 1806
|||||||| ||||||| |||||||||||||||||||| |||||||| || ||||||||
Sbjct 1429 TTGGTGCTACATCCTAGTGGAGTCAAGAAAATGGGAGAGATTCACTTAGCGGTGAGGTTT 1488
Query 1807 ACTTGCTCTTCATTGCTCAACATGATGTATATGTACTC-ACTGCCTCTCTTACCGAAGAT 1865
||||||||||||||||||||||||||||||||||| || | ||||||||||||| |||||
Sbjct 1489 ACTTGCTCTTCATTGCTCAACATGATGTATATGTATTCTA-TGCCTCTCTTACCTAAGAT 1547
Query 1866 GCATTACATCCATCCTCTAACTGTTAGCCAGCTTGATAACTTGAGGCATCAAGCGACTCA 1925
||| ||| ||||||| || || ||||||||||| |||||||| ||||||||||| |||||
Sbjct 1548 GCACTACCTCCATCCCCTCACGGTTAGCCAGCTCGATAACTTAAGGCATCAAGCAACTCA 1607
Query 1926 GATTGTATCGATGAGGTTGACCCGAGCAGAACCGCCTCTAAGGAAAGAAGTAGTTGAGTA 1985
|||||| |||| ||| | || |||||||| |||||| | ||||||||||| ||||||||
Sbjct 1608 GATTGTGTCGACAAGGCTAACACGAGCAGAGCCGCCTTTGAGGAAAGAAGTTGTTGAGTA 1667
Query 1986 TATGCTTGATGTGGGTTCTCACATGTGGAGTATGCGGAGAAGCAAAGCAAACTTT-TTCA 2044
||||||||||||||| |||||||||||||||||||| |||||||| || || ||| ||||
Sbjct 1668 TATGCTTGATGTGGGATCTCACATGTGGAGTATGCGTAGAAGCAAGGCGAA-TTTCTTCA 1726
Query 2045 GGATTATGGGAGTTTTGAGTGGGTTAATCGCAGTAGGAAAATGGTTTGAACAGATCTGCA 2104
|||| |||||||| ||||||||| ||||||| ||||| |||||||||||||||||||||
Sbjct 1727 GGATAATGGGAGTCTTGAGTGGGATAATCGCTGTAGGGAAATGGTTTGAACAGATCTGCG 1786
Query 2105 -ACTGGAAGAATCCGATCACAACAGTCTTGATCCATC-T-CTTGTTCATCATCCTTGTGC 2161
| ||||| |||||||| ||||| || || ||||| | | || ||||| ||||||||
Sbjct 1787 TA-TGGAAAAATCCGATAACAACGGTTTTAATCCA-CATTCTC-TTCATTATCCTTGTTA 1843
Query 2162 TCTATCCCGAACTAATCTTGCCCACCATCTTCCTCTACCTCTTCCTCATCGGTGTCTGGT 2221
|||| ||||| || |||||||||||||| ||||||||||||||| | || || || ||||
Sbjct 1844 TCTACCCCGAGCTCATCTTGCCCACCATTTTCCTCTACCTCTTCTTGATTGGAGTTTGGT 1903
Query 2222 ATTACCGTTGGAGACCGAGGCATCCTCCTCACATGGACACACGTCTCTCTCACGCTGACT 2281
| || || ||||| ||||| |||||||| |||||||||||||||||||| ||||||||||
Sbjct 1904 ACTATCGCTGGAGGCCGAGACATCCTCCACACATGGACACACGTCTCTCACACGCTGACT 1963
Query 2282 CAGCCCACCCCGACGAGCTAGATGAAGAGTTCGACACTTTTCCTACTTCCCGACCATCAG 2341
|||| ||||| || ||||| || || ||||| |||||||| |||||||||||||||||||
Sbjct 1964 CAGCACACCCTGATGAGCTCGACGAGGAGTTTGACACTTTCCCTACTTCCCGACCATCAG 2023
Query 2342 ACATTGTTAGGATGAGGTATGACAGGTTGAGGAGTATTGCTGGGAGGATTCAGACAGTGG 2401
|||| || |||||||| |||||| | | || || |||||||| |||||||| ||||| |
Sbjct 2024 ACATCGTCAGGATGAGATATGACCGACTCAGAAGCATTGCTGGTAGGATTCAAACAGTTG 2083
Query 2402 TAGGTGATCTTGCAACACAAGGAGAAAGGCTTCAGTC-TCTGCTAAGCTGGCGTGATCCG 2460
| |||||||||||||| |||||||| || ||||||| | |||||||||||||||| |||
Sbjct 2084 TTGGTGATCTTGCAACTCAAGGAGAGAGATTTCAGTCGT-TGCTAAGCTGGCGTGACCCG 2142
Query 2461 CGTGCGACAGCACTCTTCGTCTTGTTCTG-CTTGATTGCCGCAGTTATTCTCTATGTGAC 2519
||||| || || ||||||||||||||||| || ||| || ||||| ||| | ||| | ||
Sbjct 2143 CGTGCCACTGCTCTCTTCGTCTTGTTCTGTCT-GATAGCTGCAGTGATTTTATATATAAC 2201
Query 2520 ACCTTTCCAGGTTGTGGCTCTTTGT-ATTGGAATCTATGTTCTGAGACATCCGAGGTTCA 2578
|| ||||||||||||||| |||| ||||| | ||||| || ||||| |||||| |||
Sbjct 2202 TCCCTTCCAGGTTGTGGCT-TTTGCCATTGGCTTGTATGTGCTTAGACACCCGAGGCTCA 2260
Query 2579 GATACAAACTACCATCTGTTCCTCTCAATTTCTTCAGGAGGCTTCCTGCAAGAACTGATT 2638
| ||||| || ||||| ||||| || || ||||||||||||||||| |||||||||||||
Sbjct 2261 GGTACAAGCTCCCATCAGTTCCACTTAACTTCTTCAGGAGGCTTCCAGCAAGAACTGATT 2320
Query 2639 GCATGCTCTGA 2649
|||||||||||
Sbjct 2321 GCATGCTCTGA 2331
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 140166438742
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5