BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486241
Length=2116
Score E
Sequences producing significant alignments: (Bits) Value
AT3G57890.2 | Symbols: | Tubulin binding cofactor C domain-con... 2263 0.0
AT2G42230.2 | Symbols: | C-CAP/cofactor C-like domain-containi... 1519 0.0
> AT3G57890.2 | Symbols: | Tubulin binding cofactor C domain-containing
protein | chr3:21438084-21441888 FORWARD LENGTH=2210
Length=2210
Score = 2263 bits (1225), Expect = 0.0
Identities = 1349/1408 (96%), Gaps = 11/1408 (1%)
Strand=Plus/Plus
Query 569 GCTTGTTCGCAGCAACAGCCGTCGATTTATGCCATCACAAGCAGATGATGAAGCTCATCA 628
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 802 GCTTGTTCGCAGCAACAGCCGTCGATTTATGCCATCACAGGCAGATGATGAAGCTCATCA 861
Query 629 ATTGTCATATTTGCAAAAACATTTAGCAAACATCATTTCTCTCCTTGCAGAGCCTGTGGA 688
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 862 GTTGTCATATCTGCAAAAACATTTAGCAAACATCATTTCTCTCCTTGCAGAGCCTGTGGA 921
Query 689 GGGAGAAGGAGATGAATCATTGGTTCTCTCCATGGAGGCTTTCGAGCACCTGGGTTTTCT 748
||||||||||||||||||||||||| |||| |||||||| |||||||| ||| |||||||
Sbjct 922 GGGAGAAGGAGATGAATCATTGGTTTTCTCTATGGAGGCGTTCGAGCATCTGCGTTTTCT 981
Query 749 TGTTCAGTTTGGTGATAAGGGATCTGATGTATCTCCATTGAGCCAAGCTACTCCATTTTT 808
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 982 TGTTCAGTTTGGTGATAAGGGATCTGATGTATCTCCATTGAGCCAAGCTACTCCTTTTTT 1041
Query 809 TGCAAATTCTGATCCGGATATGCCCGCTGTTCCAGTCCCCGCTTCCCAAGTGCATGACTG 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1042 TGCAAATTCTGATCCGGATATGCCCGCTGTTCCAGTCCCCGCTTCCCAAGTGCATGACTG 1101
Query 869 GCTTATGCAAAACATAGCTTCCGCTTTAGAAAGCATTACTGAGAGAATTTCTGGAAAAGA 928
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1102 GCTTCTGCAAAACATAGCTTCCGCTTTAGAAAGCATTACTGAGAGAATTTCTGGAAAAGA 1161
Query 929 GAACGGACCTTCTAACGATCAAGATGATGCGATGTCAGATGTTTGTGCTGCTCCGAACAA 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1162 GAACGGACCTTCTAACGATCAAGATGATGCGATGTCAGATGTTTGTGCTGCTCCGAACAA 1221
Query 989 GGTTGCACCTAGTACTAGAGGTCCGTGTTTAATCGAGGGAGTCTCCAAGACTTCACTTGT 1048
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1222 GGTTGCACCTAGTACTAGAGGCCCGTGTTTAATCGAGGGAGTCTCCAAGACTTCACTTGT 1281
Query 1049 TAAGCAGGCCTCCGATCTAAGGGGTAGATCTGTGAAGGTTGTCAATTGCCATGATTCTGT 1108
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1282 TAAGCAAGCCTCCGATCTAAGGGGTAGATCTGTGAAGGTTGTCAATTGCCATGATTCTGT 1341
Query 1109 AATTTATCTTTTAGCACCATTGCGATATGCAACTGTTCATGGATGTTCTGATACTACTAT 1168
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 1342 AATTTATCTTTTAGCACCATTGCGATATGCAACTGTGCACGGATGTTCTGATACTACTAT 1401
Query 1169 AGTTTTGGGAGCTGTTGGCAAGGCATTAAAAGTTGAGCACTGTGAGAGAGTTCATGTGAT 1228
||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct 1402 AGTTTTGGGAGCTGTTGGCAAGGCAATAAAAGTTGAGCACTGTGAAAGAGTTCATGTGAT 1461
Query 1229 TGTAGCTGCCAAACGAGTGTGCATTGCCAATTGTCGTGAATGTGTATTCTTCTTGGGAGT 1288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1462 TGTAGCTGCCAAACGAGTGTGCATTGCCAATTGTCGTGAATGTGTATTCTTCTTGGGAGT 1521
Query 1289 CAATCAGCGACCACTTATTGTTGGTGATAACCACAAACTGCAGGTCGCTCCATATAATAC 1348
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1522 CAATCAGCGGCCACTTATTGTTGGTGATAACCACAAACTGCAGGTCGCTCCATATAATAC 1581
Query 1349 ATTTTACTCTCATTTGGAAGAGCACATGAGTGAGGTTGGGGTTGAGCCAACAATCAACAA 1408
|||||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||
Sbjct 1582 ATTTTACTCTCATTTGGAAGAGCACATGAGGGAGGTAGGGCTTGAGCCAACGATCAACAA 1641
Query 1409 ATGGGACAAACCATTGGCTCTGGGAGCAGTAGATCCACATGACTCACTGTCACACCCTGC 1468
|||||||||||||||||| |||||||| || |||||||||||||| |||||||| |||||
Sbjct 1642 ATGGGACAAACCATTGGCCCTGGGAGCTGTGGATCCACATGACTCCCTGTCACATCCTGC 1701
Query 1469 CGGTGTTGCTGATGCACAAGCTGAATCAGCTGCTTCTGTAGACCCTGACCAGTTCGTTAA 1528
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 1702 CGGTGTTGCTGATGCACAGGCTGAATCAGCTGCTTCTGTAGACCCTGACCAGTTCGTAAA 1761
Query 1529 CTTTTTGATCCCAAACTGGTTTAGCGGCGAGGAGACT-GGTTCGACAAAAGACAATCCAT 1587
||||||||||||||||||||||||||||| |||| || |||||||| |||||||||||||
Sbjct 1762 CTTTTTGATCCCAAACTGGTTTAGCGGCGCGGAG-CTTGGTTCGACGAAAGACAATCCAT 1820
Query 1588 TTCCATTGCCAGATACTTATATGGCAGCTCAGCAGAGAAACCTTAAGAACTTTGAAGAAA 1647
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1821 TTCCATTGCCAGATGCTTATATGGCAGCTCAGCAGAGAAACCTTAAGAACTTTGAAGAAA 1880
Query 1648 CAAGACGATCGTTAAAAGAAGCGCCTTTGGAAGAAAACCGGAAACGAGAGCTATCAAGTG 1707
||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||
Sbjct 1881 CAAGACGATCGTTAAAAGAGGCGCCTCTAGAAGAAAACCGGAAACGAGAGCTATCAAGTG 1940
Query 1708 CACTCCATGTTTATTTCAAAGACTGGCTTTACGCATCTGGAAATATAAGGCAACTCTACT 1767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1941 CACTCCATGTTTATTTCAAAGACTGGCTTTACGCATCTGGAAATATAAGGCAACTCTACT 2000
Query 1768 GCCTACAAGGTGACTAAAAAGAAAAATAGACCAAGCGGAAAATGTCTCGTTCCTGTAGAG 1827
||||||||||||||||| ||||| ||||||||||||||||| ||||| |||| |||||||
Sbjct 2001 GCCTACAAGGTGACTAATAAGAATAATAGACCAAGCGGAAAGTGTCTTGTTCATGTAGAG 2060
Query 1828 CTCCCTT-GATCATATTTGGCATATTGCTACTGAAGAAACCCTCAAAGACCaaaaaaaaa 1886
|||| || |||||||||||||||||||||| ||||||||||| || |||| | |||
Sbjct 2061 CTCC-TTCGATCATATTTGGCATATTGCTAGTGAAGAAACCC-CACC--CCAAGACCAAA 2116
Query 1887 agaagaa-gaaaaaaagGAGAAATCAGCCTGATTCAGTGATTTGTAGTTTGGAACCAATA 1945
|||| || ||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2117 AGAAAAAAGAAAAAA-G-AGAAATCAGCCTGATTCAGTGATTTGTAGTTTGGAACCAATA 2174
Query 1946 CG-CACCACGTAACTTATCTGCACAGAA 1972
| ||| |||||||||||||||||||||
Sbjct 2175 CTTCACAACGTAACTTATCTGCACAGAA 2202
Score = 941 bits (509), Expect = 0.0
Identities = 554/575 (96%), Gaps = 6/575 (1%)
Strand=Plus/Plus
Query 1 GCAACTTCACCACCGGACCAGtctctctctatctcttctgtctctcGACCTCGCGCCACG 60
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct 120 GCAACTTCACCACCGGACCAGTCTCTCTCTATCTCTTCTGTCTCTCTACCTCGCGCGACG 179
Query 61 AATCAATCATGACTGAAGAACAAGACCTCATCGACCAATCACCACCGCCTTCAGCACCCG 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 180 AATCAATCATGACTGAAGAACAAGACCTCATCGACCAATCACCACCACCTTCAGCACCCG 239
Query 121 ACCCTGAACCAAA--C---C-CGAATCCGAATTCAGTAATCCATCCGAGGCGTGTCTCTT 174
||||||||||||| | | ||||||||||||||||||||||||| |||||||| ||||
Sbjct 240 ACCCTGAACCAAACTCGAGCACGAATCCGAATTCAGTAATCCATCCAAGGCGTGTGTCTT 299
Query 175 TCGAGCACGGACTCCTCCCGATCCAGAAGCTCGTTTTTACCGACCCGATCCAAACCTTAG 234
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 300 TCGAGCACGGACTCCTCCCGATCCAGAAACTCGTTTTCACCGACCCGATCCAAACCTTAG 359
Query 235 CACCTGTCAAGCAGAAGCTAGCCGATGCCGCTTCTAATAACCGCGTTGGATCGGCTGCAA 294
| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 360 CCCCTGTCAAGCAGAAGCTAGCCGATGCGGCTTCGAATAACCGCGTTGGATCGGCTGCAA 419
Query 295 TCGCCGACGTTCTCCAGATCTCCGGCGACCATGCGCGTCTCGTTCTCGAGACTCTCGGTT 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 TCGCCGACGTTCTCCAGATCTCCGGCGACCATGCGCGTCTCGTTCTCGAGACTCTCGGTT 479
Query 355 CGGTGCTTCATTCCGAGTCTGACCCTCTGGTTCGGGCGAAACCTGAGGAAGTTGATTCTG 414
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 480 CGGTGCTTCATTCCGAGTCTGACCCTCTGGTTCGGGCGAAACCTGAGGAAGTTGATTCCG 539
Query 415 TCGGAGCTGATTTGCGGGATCTAATTTTGTTCCTCTACATTCAATCGTATAAGAAGTTGC 474
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 540 TCGGAGCTGATTTGCGGGATCTTATTTTGTTCCTGTACATTCAATCGTATAAGAAGTTGC 599
Query 475 TTCCTAGGACGCATAAGGACTCCGCAGCGGTGGCTGATGTATGGCCGTCGACTTCAGCTT 534
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 600 TTCCTAGGACGCATAAGGACTCCGCAGCGGTGGCTGATGTTTGGCCATCGACTTCAGCTT 659
Query 535 TTGATGGATACTTGTCTGCGTTATCGCCAATTCAG 569
|||||||||||||||||||||||||||||||||||
Sbjct 660 TTGATGGATACTTGTCTGCGTTATCGCCAATTCAG 694
> AT2G42230.2 | Symbols: | C-CAP/cofactor C-like domain-containing
protein | chr2:17593411-17596629 REVERSE LENGTH=2067
Length=2067
Score = 1519 bits (822), Expect = 0.0
Identities = 1448/1741 (83%), Gaps = 79/1741 (5%)
Strand=Plus/Plus
Query 82 AAGACCTCATCGACCAATCACCACCGCCTTCAGCACCC-GACCCTGAACCAAACCCGAAT 140
|||| |||||||||||||||||||| || | | |||| ||||| || | || |||
Sbjct 74 AAGAGCTCATCGACCAATCACCACCACC-T--G-ACCCAGACCC-GATTC-AA----AAT 123
Query 141 CCGAATTCAGTAATCCATCCGAGGCGTG-TCTCTTTCGAGCACGGACTCCTCCCGATCCA 199
|||||| | ||||||| || || |||| || ||||||||||||| || || ||||||||
Sbjct 124 TCGAATTTAATAATCCACCCAAGACGTGTTC-CTTTCGAGCACGGCCTTCTTCCGATCCA 182
Query 200 GAAGCTCGTTTTTACCGACCCGATCCAAACCT-TAGCACCTG-TCAAGCAGAAGCTAGC- 256
|||||||||||||||||||||||| |||| || |||| || | ||||||| ||| ||||
Sbjct 183 GAAGCTCGTTTTTACCGACCCGATTCAAA-CTCTAGCTCC-GATCAAGCAAAAGTTAGCT 240
Query 257 -CGATGCCGCTTCTAATAACCGCGTTGGATCGGCTGCAATCGCCGACGTTCTC-CAGATC 314
| || || | ||| | ||||| ||||| ||||| || |||| | ||| | ||||
Sbjct 241 TCTTTG--GCGACGAATCATCGCGTCGGATCTGCTGCCATTTCCGATGCACTCTC-GATC 297
Query 315 TCCGGCGACCATGCGCGTCTCGTTCTCGAGACTCTCGGTTCGGTGCTTCATTCCGAGTCT 374
|||| ||||||||||| ||||||||||| |||||| ||||||||| |||| |||| ||
Sbjct 298 TCCGATGACCATGCGCGCCTCGTTCTCGAAACTCTCTCTTCGGTGCTCCATTGCGAGACT 357
Query 375 GACCC-TCTGGTTCGGGCGAAACCTGAGGAAGTTGATTCTGTCGGAGCTGATTTGCGGGA 433
||||| | ||||| ||| |||||||||||||||||||| || |||||||||||| ||||
Sbjct 358 GACCCAT-TGGTTTTGGCCAAACCTGAGGAAGTTGATTCCGTGGGAGCTGATTTGAGGGA 416
Query 434 TCTAATTTTGTTCCTCTACATTCAATCGTATAAGAAGTTGCTT-CCTAGGACGCATAAGG 492
||| || ||||| |||||||||||||||||||||||||| || |||||||||||||| |
Sbjct 417 TCTGATATTGTTTCTCTACATTCAATCGTATAAGAAGTT-ATTGCCTAGGACGCATAAAG 475
Query 493 ACTCCGCAGCGGTGGCTGATGTATGGCCGTCGACTTCAGCTTTTGATGGATACTTGTCTG 552
|||| || | ||||||||||| ||||| |||||||| |||||||||||||||||||| |
Sbjct 476 ACTCTGCTTCTGTGGCTGATGTTTGGCCTTCGACTTCTGCTTTTGATGGATACTTGTCGG 535
Query 553 CGTTATCGCCAATTCAGCTTGTTCGCAGCAACAGCCGTCGATTTATGCCATCA-CAAGCA 611
| ||||| ||||||||||||||||| |||||||||||||| |||||||||||| | | ||
Sbjct 536 CATTATCTCCAATTCAGCTTGTTCGTAGCAACAGCCGTCGGTTTATGCCATCACCGA-CA 594
Query 612 GATGATGAAGCTCATCAATTGTCATATTTGCAAAA--ACATTTAGCAAACATCATTTCTC 669
||||| |||||||||||||| || ||| ||||||| ||| || ||||| || |||||||
Sbjct 595 GATGAAGAAGCTCATCAATTATCGTATCTGCAAAAGCACA-TT-GCAAATATTATTTCTC 652
Query 670 TCCTTGCAGAGCCTGTGGAGGGAGAAGGAGATGAATCATTGGTTCTCTCCATGGAG-GCT 728
||||||||||||||||||||||| |||||||||| || ||||| || || |||||| | |
Sbjct 653 TCCTTGCAGAGCCTGTGGAGGGACAAGGAGATGATTCTTTGGTCCTGTCTATGGAGAG-T 711
Query 729 TTCGAGCACCT-GGGTTTTCTTGTTCAGTT-TGGTGATAAGGGATCTGATGTATCTCCAT 786
|| |||||| | |||||| |||||||| || |||||||||||||| ||||||| || | |
Sbjct 712 TTGGAGCACATTGGGTTT-CTTGTTCA-TTATGGTGATAAGGGATTTGATGTACCTTCTT 769
Query 787 TGAGCCAAGCTACTCCATTTTTTGCAAATTCTGATCCGGATATGCCCGCTGTTCCAGTCC 846
| |||||||||||||| |||||||| ||||||||||| |||||||||||||| || || |
Sbjct 770 TAAGCCAAGCTACTCCTTTTTTTGCGAATTCTGATCCTGATATGCCCGCTGTCCCCGTTC 829
Query 847 CCGCTTCCCAAGTGCATGACTGGCTTATGCAAA-ACATAGCTTCCGCTTTAGAAAGCATT 905
| |||||||||||| |||| |||||| | |||| ||||||||||||| ||||||||||||
Sbjct 830 CTGCTTCCCAAGTGAATGATTGGCTTCT-CAAAGACATAGCTTCCGCCTTAGAAAGCATT 888
Query 906 ACTGAGAGAATTTCTGGAAAAGAGAACGGACCTTCTAA--C----GATCAAGA-TGATGC 958
|| | ||||| ||||| ||||| || || | ||||| | ||||| || || |||
Sbjct 889 TCTAACAGAATCTCTGGGAAAGAAAATGGGGCATCTAATGCCTCTGATCA-GAATGCTGC 947
Query 959 GATGTCAGATGTTT-GTGCT-GCTCCGAACAAGGTTGCACCTA--GTACTAGAGGTCCGT 1014
||| | ||| | | ||| | |||| || || ||| || ||| | || |||||||| |
Sbjct 948 AATGGCTGAT-TCTAGTG-TAGCTCTTAATAAAGTTTCATCTAACG-AC-AGAGGTCCAT 1003
Query 1015 GT-TTAATCGAGGGAGTCTCCAAGACTTCACTTGTT-AAGCAGGCCTCCGATCT-AAGGG 1071
|| ||| | ||||||||||| ||||| |||||| || |||||||| || ||||| |||||
Sbjct 1004 GTATTATT-GAGGGAGTCTCTAAGACCTCACTT-TTCAAGCAGGCTTCTGATCTTAAGGG 1061
Query 1072 GTAGATCTGTGAAGGTTGTCAATTGCCATGATTCTGTAATTTATCTTTTAGCACCATTGC 1131
|||||| |||||||||| |||||||||||||||||| |||||||| ||||| ||||||
Sbjct 1062 -TAGATCAGTGAAGGTTGCCAATTGCCATGATTCTGTTATTTATCTGTTAGCGCCATTGA 1120
Query 1132 GATATGCAACTGT-TCATGGATGTTCTGATACTACTATAGTTTTGGGAGCTGTTGGCAAG 1190
||||||||||||| | |||| ||||||||| ||||||| ||| ||||||||| |||||||
Sbjct 1121 GATATGCAACTGTGT-ATGGGTGTTCTGATTCTACTATCGTTCTGGGAGCTGCTGGCAAG 1179
Query 1191 GCATTAAAAGTTGAGCACTGTGAGAGAGTTCATGTGATTGTAGCTGCCAAACGAGTGTGC 1250
||| ||||||||||||| ||||||||||||||||||||||||||| |||||||| | |||
Sbjct 1180 GCAGTAAAAGTTGAGCATTGTGAGAGAGTTCATGTGATTGTAGCTACCAAACGAATTTGC 1239
Query 1251 ATTGCCAATTGTCGTGAATGTGTATTCTTCTTGGGAGTCAATCAGCGACCACTTATTGTT 1310
|| |||||||| ||||||||||| ||||| |||||||||||||||||||| ||||| |||
Sbjct 1240 ATCGCCAATTGCCGTGAATGTGTGTTCTTTTTGGGAGTCAATCAGCGACCTCTTATAGTT 1299
Query 1311 GGTGATAACCACAAACTGCAGGTCGCTCCATATAATACATTTTACTCTCATTTGGAAGAG 1370
||||||||||||||||| ||||| ||||||||||||||||||||||| || ||||| |||
Sbjct 1300 GGTGATAACCACAAACTACAGGTTGCTCCATATAATACATTTTACTCACACTTGGAGGAG 1359
Query 1371 CACATGAGTGAGGTTGGGGTTGAGCCAACAATCAACAAATGGGACAAA-CCATTGGCTCT 1429
||||| | ||||| || || ||||||| |||||||||||| || || || ||||| ||
Sbjct 1360 CACATAACCGAGGTAGGAATTCAGCCAACTATCAACAAATGGAACGAATCC-TTGGCGCT 1418
Query 1430 GGGAGCAGTAGATCCACATGACTCACTGTCACACCCTGCC-GGTGT-TGCTGATGCACAA 1487
|||||| | ||||| ||||||||||| ||||| || | | |||| | ||||| ||||
Sbjct 1419 CGGAGCAATTGATCCGCATGACTCACTATCACATCC-GACTGGTGCCT-CTGATAAACAA 1476
Query 1488 GCTGAATCAGCTGCTTCTGTAGACCCTGACCAGTTCGTTAACTTTTTGATCCCAAACTGG 1547
|||||| | ||| ||| ||| ||||||||||||||| || |||||||||||||||||||
Sbjct 1477 GCTGAACCGGCTTCTTGTGTGGACCCTGACCAGTTCACTACCTTTTTGATCCCAAACTGG 1536
Query 1548 TTTAGCGGC-GAGGAGACTGGTTCGACAAAAGACAATCCATTTCCATTGCCAGATACTTA 1606
||| |||| |||| || |||||| || ||||||||||||||||||||||||||| | ||
Sbjct 1537 TTT-GCGGGTGAGGCGATTGGTTCCACGAAAGACAATCCATTTCCATTGCCAGATGCATA 1595
Query 1607 TATGGCAGCT-CAGCAGAGAAACCTTAAGAACTTTGAAGAAACAAGACGATCGTTAAAAG 1665
|| ||||| | ||||||| ||||||||||||||| || |||||||||| ||| || | ||
Sbjct 1596 TAAGGCAG-TGCAGCAGACAAACCTTAAGAACTTAGAGGAAACAAGACAATCCTTGAGAG 1654
Query 1666 AAGCGCCTTTGGAAGAAAACCGGAAACGAGAGCT-ATCAAGTGCACTCCATGTTTATTTC 1724
|| | ||| | ||||||||||| |||||||| || | | | || |||| | ||||||
Sbjct 1655 AAACACCTCTCGAAGAAAACCGAAAACGAGAACTCA-CTACAGCGTTCCACATGTATTTC 1713
Query 1725 AAAGACTGGCTTTACGC-ATCTGGAAATATAAGGCAACTCTACTGCCTACAAGGTGACTA 1783
||||||||||| ||||| | | |||||||| ||||||| |||||||||||||| || ||
Sbjct 1714 AAAGACTGGCTATACGCGA-CGGGAAATATTCGGCAACTTTACTGCCTACAAGGCGATTA 1772
Query 1784 A 1784
|
Sbjct 1773 A 1773
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 104919139050
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5