BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg486242 Length=1114 Score E Sequences producing significant alignments: (Bits) Value AT3G57910.1 | Symbols: | D111/G-patch domain-containing protei... 1666 0.0 > AT3G57910.1 | Symbols: | D111/G-patch domain-containing protein | chr3:21442748-21444312 FORWARD LENGTH=1165 Length=1165 Score = 1666 bits (902), Expect = 0.0 Identities = 1031/1091 (95%), Gaps = 17/1091 (2%) Strand=Plus/Plus Query 1 CGCTAACCCAAGCTCCGTCGGCAATGGCAGAATCGACGAGAAATCTGACTGGACTTGGAG 60 ||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1 CGCGAACGCAAGCTCCGTCGGCAATGGCAGAATCGACGAGAAATCTGACTGGGCTTGGAG 60 Query 61 GAGAAGCAGCGAAAGAAGAAGATGATGACTACATGGGAGACCTTTCTCAGTTTATTCCTC 120 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 61 GAGAAGCAGCGAAAGAAGAAGATGATGAGTACATGGGAGACCTTTCTCAGTTTATTCCTC 120 Query 121 CGGAACTTACCCAGACCTCCAAAAGAAAGGAATCTGAAAAGAAAACTGTAATCGTTGAAC 180 |||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct 121 AGGAACTTAGCCAGACCTCCAAAAGAAAGGAATCTGAGAAGAAAACTGTAATCGTAGAAC 180 Query 181 CATCACGGAAGAAGTTAAAGAATCTCAATTGGCACGAGAGGCGAAGATTGGAGAAAGAGA 240 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct 181 CATCACGGAAGAAGTTAAAAAATCTCAATTGGCACGAGAGACGAAGATTGGAGAAAGAGA 240 Query 241 GGAAACAGATAGAAGAGGATGAGCAGACATTGGCTCGTATTGTAGACACTCCTATTGGAG 300 |||||||||||||||| ||||||||||||||||||||||| ||||||||||| || |||| Sbjct 241 GGAAACAGATAGAAGAAGATGAGCAGACATTGGCTCGTATAGTAGACACTCCAATAGGAG 300 Query 301 AGTCTAACATAGGGTTTAAGCTATTGAAGCAAATGGGTTACAAGCCAGGTTCTGCTCTTG 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 AGTCTAACATAGGGTTTAAGCTATTGAAGCAAATGGGTTACAAGCCAGGTTCTGCTCTTG 360 Query 361 GTAAAGAAGGCTCTGGTAGGGCTGAGCCAGTGACTATGGATATTCGAAGATCGAGGGCCG 420 ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct 361 GTAAACAAGGCTCTGGTAGAGCTGAGCCAGTGACTATGGATATTCGAAGATCGAGAGCCG 420 Query 421 GTGTGggaagagaggatccacataaggagaagaagaaaaaagaggagattgaggctgaga 480 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 421 GTGTGGGAAGAGAGGATCCACATAAGGAGAAGAAGAAAAAGGAGGAGATTGAGGCTGAGA 480 Query 481 ttgagaagagaaaggtggaggagatgttggaggaTTTTGGGTCTAGACAGAAGTCTCAAT 540 |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 481 ATGAGAAGAGAAAAGTGGATGAGATGTTGGAGGATTTTGGGTCTAGACAGAAGTCTCAAT 540 Query 541 GGCGTAAGAAGAGAGTTTTGATTAACTTTAGGAAGGCTAAGGCGGCTCTTGATCAACTTG 600 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 541 GGCGTAAGAAAAGAGTTTTGATTAACTTTAGGAAGGCTAAGGCTGCTCTTGATCAACTTG 600 Query 601 AGAACGTAGAAGTTGTTCCggagaagaaaaacgaggaagatgaggatggtaagcctgatg 660 |||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 601 AGAATGTAGAAGTTGTTCCGGAGAAGAAAAATGAGGAAGATGAAGATGGTAAGCCTGATG 660 Query 661 aagaagaggaagaagaagaggagatcactgaagaggatTTGCAAGAAATATTAATGAAAC 720 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 AAGAAGAGGAAGAAGAGGAGGAGATCACTGAAGAGGATTTGCAAGAAATATTAATGAAAC 720 Query 721 TGAGAGATGAACATTGGTATTGCCCTTTCTGCGGGTTCCAGTATGAAACGACTGAAGCCC 780 |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct 721 TGAGAGCTGAACATTGGTATTGCCTTTTCTGCGGGTTCCAGTATGAAACGACTGAAGCTC 780 Query 781 TTCTATCCAATTGTCCTGGCGTAAATGAGGATGATCACTAGATAAGTCACAGTAGTATGG 840 |||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct 781 TTCTATCCAACTGTCCTGGCGTAAATGAGGATGATCACTAGATAAGCCACACTAGTATGG 840 Query 841 AAGCACACAAACACAAT----GTCTGCAGAAGCTTCAGGTTGAAAATTACCTGATGTGGC 896 ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| Sbjct 841 AAGCACACAAACACAATCCATGTCTGCAGAAGCTTCAGGTTGAAAATTTCCTGATGTGGC 900 Query 897 TGAAGAGGAAGCAAGATACAGAAGAAAGACTGTGTTTGCGGGTGAGGTACACACTTTAGA 956 |||||||||||||||||||||||| |||||||||||||| | |||||||||||||| ||| Sbjct 901 TGAAGAGGAAGCAAGATACAGAAGGAAGACTGTGTTTGCAGTTGAGGTACACACTT-AGA 959 Query 957 AAATTTTAAGGACTTGCTAATTCCCATATTACTCTTGCTTTTAA-TAGATAGTAGGATGA 1015 | | |||||||||||||||||| ||| |||||||| ||||||||||||||| Sbjct 960 A--TCTTAAGGACTTGCTAATTCTCAT---------GCTTTTAAATAGATAGTAGGATGA 1008 Query 1016 TTAAAGCATGTGGAACTCTGATTTGATAAAACAATATATTGATTATGATGTTGATGTTTC 1075 | ||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||| Sbjct 1009 TAAAAGCATGTGGAACTCTGATTTGATAAGACAATATATTGATGATAATGTTGATGTTTC 1068 Query 1076 AATTTGATCTC 1086 ||||||||||| Sbjct 1069 AATTTGATCTC 1079 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 54618192960 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5