BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486257
Length=3762
Score E
Sequences producing significant alignments: (Bits) Value
AT3G58050.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 5818 0.0
AT2G41960.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 1227 0.0
> AT3G58050.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT2G41960.1);
Has 13384 Blast hits to 8116 proteins in 546 species: Archae
- 41; Bacteria - 766; Metazoa - 5596; Fungi - 1431; Plants
- 589; Viruses - 46; Other Eukaryotes - 4915 (source: NCBI
BLink). | chr3:21492539-21497157 FORWARD LENGTH=3769
Length=3769
Score = 5818 bits (3150), Expect = 0.0
Identities = 3575/3779 (95%), Gaps = 34/3779 (1%)
Strand=Plus/Plus
Query 1 ATGCCTGGTTTAGCGCAGAGG---AATGACCAATACTCTTTTGGCTTCTGGTCAAAGGAA 57
||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGCCGGGTTTAGCGCAGAGGAATAATGACCAATACTCTTTTGGCTTCTGGTCAAAGGAA 60
Query 58 ATCGATGGAGTCAGCTACAATCAGCTCCAAAAGTTCTGGAGTGAGCTGTCGCCGAAAGCT 117
|||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 61 ATCGATGGTGTCAGCTATAATCAGCTCCAAAAGTTCTGGAGTGAGCTGTCACCGAAAGCT 120
Query 118 AGGCAGGAACTCCTCAAGATTGACAAACAGACTTTGTTTGAGCAAGCTCGTAAGAACATG 177
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 AGGCAGGAACTCCTTAAGATTGACAAACAGACTTTGTTTGAGCAAGCTCGTAAGAACATG 180
Query 178 TATTGTTCCAGATGCAATGGCCTGCTTCTCGAAGGTTTCTTGCAGATTGTTATGCATGGG 237
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 181 TATTGTTCCAGATGCAATGGTCTGCTTCTCGAAGGTTTCTTGCAGATTGTTATGCATGGG 240
Query 238 AAGTCCTTGCATCCGGAGGGATCAATAGGGAGTTCTCCTTGCAACAAATCAGGAGGCTCG 297
|||||||||||||||||||||||| |||||| ||||||||||||||||||||| || ||
Sbjct 241 AAGTCCTTGCATCCGGAGGGATCATTAGGGAATTCTCCTTGCAACAAATCAGGGGGATCC 300
Query 298 AAATATCAAAATGACTGTAACTCCGTTGTCAGTAACGGATGTTCGGATGAGATGCAAGAT 357
||||||||| ||||||||||| | ||||| |||||||||||| |||||||||||||||||
Sbjct 301 AAATATCAATATGACTGTAACGCAGTTGTTAGTAACGGATGTGCGGATGAGATGCAAGAT 360
Query 358 CCGTCTGTTCATCCATGGGGAGGTCTCGCCACGACACGTGATGGGTCACTCACGCTTCTT 417
|||||||||||||| |||||||||||| |||| |||||||||||||| || |||||||||
Sbjct 361 CCGTCTGTTCATCCGTGGGGAGGTCTCACCACAACACGTGATGGGTCGCTTACGCTTCTT 420
Query 418 GATTGCTATTTGTACGCAAAGTCTCTCAAAGGACTTCAAAATGTGTTTGACAGCGCCCCT 477
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 421 GATTGCTATTTGTATGCAAAGTCTCTCAAAGGACTTCAAAATGTGTTTGACAGTGCCCCT 480
Query 478 GCTCGAGAAAGGGAACGTGAGTTGCTTTATCCTGATGCTTGTGGTGGTGGAGGTCGAGGA 537
|||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||
Sbjct 481 GCTCGAGAAAGGGAACGTGAGTTGCTATATCCTGATGCTTGTGGTGGTGGAGGCCGGGGA 540
Query 538 TGGATAAGTCAAGGAATGGCTAGCTATGGTAGAGGTCATGGAACTAGAGAAACGTGTGCT 597
||||||||||||||||| ||||||| ||||||||| |||||||| |||||||||||||||
Sbjct 541 TGGATAAGTCAAGGAATCGCTAGCTTTGGTAGAGGGCATGGAACAAGAGAAACGTGTGCT 600
Query 598 CTACATACTGCAAGGCTTTCTTGTGATACATTGGTAGATTTCTGGTCCGCACTCAGCGAG 657
|||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||
Sbjct 601 CTACATACTGCAAGGCTTTCTTGTGATACACTGGTGGATTTCTGGTCCGCACTCAGTGAG 660
Query 658 GAAACTCGACAATCTCTTTTGAGGATGAAAGAAGAGGATTTTATGGAAAGACTGAGGTAC 717
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 661 GATACTCGACAATCTCTTTTGAGGATGAAAGAAGAGGATTTTATGGAGAGACTGAGGTAC 720
Query 718 AGGAAGT-TTTTGGA-CATGATCTGGATATCACATTCTGAATTGCTAGATGAATGGGCAT 775
||| | | | || | || || | ||||||||| |||||||| |||||||| |||||
Sbjct 721 AGG-A-TATGTT--ACCA--CTCAAGTTATCACATTTTGAATTGCAAGATGAATAGGCAT 774
Query 776 TTCTTTGTCTGGACT-TTGAGGATGTGCCTACCAAATTCGACAGCAAGAGATTTTGTAGA 834
||| ||||||||||| || | ||||| | |||||||||||||||||||||||||||||||
Sbjct 775 TTCGTTGTCTGGACTATTCAAGATGTTCTTACCAAATTCGACAGCAAGAGATTTTGTAGA 834
Query 835 GACTGCAGACGAAATGTTATTCGTGAGTTCAAAGAGCTTAAGGAACTGAAACGAATGCGG 894
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 835 GACTGCAGACGAAACGTTATTCGTGAGTTCAAAGAGCTTAAGGAACTGAAACGAATGCGG 894
Query 895 AGAGAACCTCGATGTACCACATGGTTTTGTGTTGCCGATACAGCCTTCCAATATGAGGTA 954
||||||||||| |||||||||||||||||||||||| ||||| | |||||||||||||||
Sbjct 895 AGAGAACCTCGGTGTACCACATGGTTTTGTGTTGCCAATACAACATTCCAATATGAGGTA 954
Query 955 TCCATTGATTCGGTGAAAGCAGACTGGCGGGAAACTTTTTCTGAGAATGCTGGAATGTAC 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 955 TCCATTGATTCGGTGAAAGCAGACTGGCGGGAAACTTTTTCTGAGAATGCTGGAAAGTAC 1014
Query 1015 CATCATTTTGAGTGGGCAATTGGAACCGGAGAAGGAAAATGTGATATCCTCAAGTTTGAA 1074
||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1015 CATCACTTTGAGTGGGCAATTGGATCCGGAGAAGGAAAATGTGATATCCTCAAGTTTGAA 1074
Query 1075 AATGTTGGCATGAATGGGAGAGTTCAAGTCAATGGCCTAGACCTTCGTGGTTTAAATTCA 1134
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1075 AATGTTGGCATGAATGGGAGAGTTCAAGTCAATGGCCTAAACCTTCGTGGTTTAAATTCA 1134
Query 1135 TGTTACATTACCCTTAGAGCTTATAAATTAGATGGCCGCTGGTCTGAGGTATCCGTCAAA 1194
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct 1135 TGCTACATTACCCTTAGAGCTTATAAATTAGATGGCCGCTGGTCTGAAGTATCCGCCAAA 1194
Query 1195 GCCCATGCATTAAAAGGTCAAAACTGTGTGCACGGCAGACTAGTAGTTGGGGATGGCTTT 1254
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 1195 GCCCATGCATTAAAAGGTCAAAACTGTGTTCACGGCAGGCTAGTAGTTGGGGATGGCTTT 1254
Query 1255 GTTTCAATAAAGAGAGGTGAAAGCATCCGAAGATTTTTTGAGCATGCTGAAGAGGCTGAG 1314
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1255 GTTTCAATCAAGAGAGGTGAAAGCATCCGAAGGTTTTTTGAGCATGCTGAAGAGGCTGAG 1314
Query 1315 GAAGAAGAGGATGAAGACATGATGGACAAAGATGGGAATGAGCTTGATGGGGAATGCTCC 1374
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1315 GAAGAAGAGGATGAAGACATGATGGACAAAGATGGGAATGAGCTCGATGGGGAATGCTCT 1374
Query 1375 CGTCCACAAAAGCATGCAAAAAGTCCAGAACTTGCTCGAGAGTTTCT-TCTAGATGCTGC 1433
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 1375 CGTCCACAAAAGCATGCAAAAAGTCCAGAACTTGCTCGAGAGTTTCTAT-TAGATGCTGC 1433
Query 1434 GACAGTTATTTTTAAAGAACAGGTTGAAAAAGCATTCAGGGAAGGAACCGCTCGGCAAAA 1493
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1434 AACAGTTATTTTTAAAGAACAGGTTGAAAAAGCATTCAGGGAGGGAACCGCTCGGCAAAA 1493
Query 1494 TGCACACAGTATCTTTGTATGTCTTACATTGAAACTATTAGAACAACGTGTACATGTTGC 1553
|||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 1494 TGCACATAGTATCTTTGTATGTCTTACATTGAAACTATTAGAACAACATTTACATGTTGC 1553
Query 1554 CTGCAAGGAAATTATCACCTTGGAGAAACAGGTGAAACTTCTTgaggaagaagagaagga 1613
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1554 CTGCAAGGAAATTATTACCTTGGAGAAACAGGTGAAACTTCTTGAGGAAGAAGAGAAAGA 1613
Query 1614 aaagcgtgaagaagaggagcggaaagagaagaaaagatccaaagaaagggagaaaaaact 1673
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 1614 AAAGCGTGAAGAAGAGGAGCGGAAGGAGAAGAAAAGATCCAAAGAGAGGGAGAAAAAACT 1673
Query 1674 tcgcagaaaggagagattgaaggaaaaagaaaaaggcaaggagaagaaaaaCCCTGAATC 1733
||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1674 TCGCAAAAAGGAGAGATTGAAGGAAAAAGACAAAGGCAAGGAGAAGAAAAACCCTGAATG 1733
Query 1734 TAGCGATAAAGACATGCTGCTGAATTCACCAAGGGAAGAAGAAGATCTTCCCAACCTTGA 1793
|||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |
Sbjct 1734 TAGCGATAAAGACATGCTGCTGAATTCATCAAGGGAAGAAGAAGATCTTCCAAACCTTTA 1793
Query 1794 TGATAAGACAAATAATACCATAAACTGCGAGGAGTCAGAAATTGAAACGGGGGATGCAGA 1853
|||| |||| || |||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct 1794 TGATGAGACGAACAATACCATAAACAGCGAGGAGTCAGAAATTGAAACGGGGTATGCAGA 1853
Query 1854 TTTGTCTCCACCTGGTTCTCCTGATGTTCAAGAAAGACAGTGTTTGGATGGTTGCCCTTC 1913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1854 TTTGTCTCCACCTGGTTCTCCTGATGTTCAAGAAAGACAGTGTTTGGATGGTTGCCCTTC 1913
Query 1914 TCCAAGAGCGGAAAACCACTACTGTGACAGCCCTGACAGAGAAT-TTACAGATCTTGAAG 1972
|||||||||||||||||||||||||||||| |||||||||| || ||| |||||||||||
Sbjct 1914 TCCAAGAGCGGAAAACCACTACTGTGACAGACCTGACAGAG-ATATTAAAGATCTTGAAG 1972
Query 1973 GTGAGAACGGGTACTTTACAAATGATCATCAAAAAACTGTTCACCAGAATGCAAGATATT 2032
|||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct 1973 ATGAGAATGTGTACTTTACAAATGATCATCAAAAACCTGTTCACCAGAACGCAAGATATT 2032
Query 2033 GGAAAGAAGTGCAGTCTGATAATGCTTTGAGGTGGTCAGATAAACGCAGATATTCGGATA 2092
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2033 GGAAAGAAGTGCAGTCTGATAATGCTTTGAGGTGGTCAGATAAACGCAGATATTCAGATA 2092
Query 2093 ATGCTTCGTTTGTCGGTAGGTCAGAGGCAAGATACCGTAATGATAGATTAGAAGTGCCTT 2152
||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2093 ATGCTTCTTTTGTCAGTAGGTCAGAGGCAAGATACCGTAATGATAGATTAGAAGTGCCTT 2152
Query 2153 CAAGGGGATTTAATGGGTCAAACAAACAGTTAAGAGTTAAACCTTCAAAGACTGGTGGCC 2212
|||||||||| ||||||||||||| |||||||||||| || ||||||||||||||||||
Sbjct 2153 CAAGGGGATTCAATGGGTCAAACAGACAGTTAAGAGTGAATGCTTCAAAGACTGGTGGCC 2212
Query 2213 TGAATGGCATCAAGTCTCATGAGAAGTTTCAATGTTGCGACAACAGGATCAGTGAGAGGT 2272
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2213 TGAATGGTATCAAGTCTCATGAGAAGTTTCAATGTTGCGACAACAGAATCAGTGAGAGGT 2272
Query 2273 TTGACTTAAATTCTTGCAGTTGCAAACCGAGTAGTGAATACCGGGCAAAATTAGAACCTA 2332
||||||| | |||||||||||||||||| ||| ||||||| ||||||||| |||||||||
Sbjct 2273 TTGACTTCAGTTCTTGCAGTTGCAAACCAAGTTGTGAATATCGGGCAAAAGTAGAACCTA 2332
Query 2333 ACATCTCT-GCTACCAGAAGCATGCGAGAACCAAAAA-CAGTATCCAATTCTGACTCTGC 2390
| | | || | | ||||||||| |||||||||||||| || |||||||||| ||||||||
Sbjct 2333 AAACCGCTGGAT-CCAGAAGCACGCGAGAACCAAAAACCA-TATCCAATTCGGACTCTGC 2390
Query 2391 TCCTGATGCCTCCAAGCCAGTGTTCCGAGGCAACAGGTATACTCAATCAGACCATACTCG 2450
|| ||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||
Sbjct 2391 TCTTGATGCCTCCAAGCCAGTGTTCCAAGGCAACAGGTATACTCAACCAGACTATACTCG 2450
Query 2451 TGAGTTAAGACTTAAGAGCAAGGTGGGAGTTGGTCCAAATCCTTCTAATACTAGAGATTC 2510
||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||
Sbjct 2451 TGAGTTAAGACTTAAAAGCAAGGTTGGAGTTGGTCCAAATCCTTCTACTACTAGAGATTC 2510
Query 2511 ACTACATTCAAAACAAGTTTGGGAGCCCATAGAGCCAAAGAAGTATCCACGAAGCAACTC 2570
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 2511 ACTACATTCAAAACAAGTTTGGGAGCCCATGGAGCCAAAGAAGTACCCACGAAGCAACTC 2570
Query 2571 TG-ACTCTGAAGTAACAGTTAGATGTTCAACATTTAAAGCTGAAGAGATAGAAGACACTA 2629
| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct 2571 -GTACTCTGAAGTAACAGTTAGATGTTCAACATTTAAGGCTGAAGAGATAGAAGACGCTA 2629
Query 2630 TCGTTGCTGAGAATTCATCTGACCTTTTGTCTCAATGTAAGGCTACAGAGAAATTGGATA 2689
|||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct 2630 TCGTTGCTGAGAATTCATCTGACCTTTTGTCTCAATGTAAGGTTACAGAGAAGTTGGATA 2689
Query 2690 ATATCAAGCTTAAAGAT-AACAACAGCATGGAGTCCGGGGAAACAAAGAATGGGTGGCAT 2748
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 2690 ATATCAAGCTTAAAGATGAA-AACAGCATGGAGTCCGGGGAAACAAAGAATGGGTGGCAT 2748
Query 2749 TTGAAAGATCCTATGATTAGTAGTACATCGAGTTCAGACAATTGCTCGTCATGCCTGAGC 2808
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2749 TTGAAAGATCCTATGATGAGTAGTACATCGAGTTCAGACAATTGCTCGTCATGCCTGAGC 2808
Query 2809 GAGGGAGAGAGCAATACGGTTTCTTCAAACAACGGAAACACTGAATCCTCCTCCACATCT 2868
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2809 GAGGGAGAGAGCAATACGGTTTCGTCAAACAACGGAAACACTGAATCCTCCTCCACATCT 2868
Query 2869 GATTCTGAAGACGCCAGTCAGCAATCTGAAGGAAGAGAGAGTATAGTTGTTGGTACACAG 2928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2869 GATTCTGAAGACGCCAGTCAGCAATCTGAAGGAAGAGAGAGTATAGTTGTTGGTACACAG 2928
Query 2929 AACGATATCCTCATACCAGATACTACTGGGAAGAGTGAAATTCCGGAAACTCCTATAGTA 2988
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2929 AACGATATCCTCATACCAGATACTACTGGGAAGAGTAAAATTCCGGAAACTCCTATAGTA 2988
Query 2989 GTAACTGGGAACAACACTG-ATAATAACAGTAACAATAACATGGCACATGGTGTTGTTGA 3047
|||||||||||||||| || ||||||||||||||||||| |||| ||||||| |||||||
Sbjct 2989 GTAACTGGGAACAACA-TGGATAATAACAGTAACAATAATATGGTACATGGTCTTGTTGA 3047
Query 3048 TGGGCAACCACAAGGAGGCATGTTCCCTCATTTGCTAAACCAGAATCTACAATTTCCCGT 3107
|| ||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||
Sbjct 3048 TGTGCAACCACAAGGAGGCATGTTCCCTCATTTGCTAACCCAGAATCTACAGTATCCCGT 3107
Query 3108 TTTCCAGACTGCTTCACCAATGAGCTACTTCCATCAAGCACCACCAGTCTCTTGGCCCAT 3167
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 3108 TTTCCAGACTGCTTCACCAATGGGCTACTTCCATCAAGCACCACCAGTCTCTTGGCCCAC 3167
Query 3168 GGCTCCAGCCAATGGATTAATTCCGTTCGCTCACCCTAATCCCTATCTATACACAGGTCC 3227
|| ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||
Sbjct 3168 GGGTCCAGCCAATGGATTGATTCCATTCCCTCACCCTAATCCTTATCTATACACAGGTCC 3227
Query 3228 GCTCGGATATAGTATGAACGGAGATTCCCCGCTGTGCTTGCAGTATGGTAACCCACTAAA 3287
||||||||||||||||||||||||| ||||||||||||||||||| |||| |||| | ||
Sbjct 3228 GCTCGGATATAGTATGAACGGAGATCCCCCGCTGTGCTTGCAGTACGGTAGCCCATTGAA 3287
Query 3288 TCATGCGGCAACTCCCTTCTTCAATCCC-GGGCCAGTTCCAGTGTTCCATCCATATTCCA 3346
|||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||
Sbjct 3288 TCATGCGGCAACTCCCTTCTTCAA-CCCTGGGCCAGTTCCAGTGTTCCATCCATTTTCCA 3346
Query 3347 AAACCAACACCGAGGACCAAGCTCAGAATCTTGAGCCGCCACAGGAACTAAACGGTTTGG 3406
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 3347 AAACCAACACCGAGGACCAAGCTCAGAATCTTGAGCCGCCACTGGAACTAAACTGTTTGG 3406
Query 3407 CTCAACCGGAAACACAGACCGTAAGTGAAGACAGCTTCTCCTTATTCCATTTCAGTGGAC 3466
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 3407 CTCCACCGGAAACACAGACCGTAAATGAAGACAGCTTCTCCTTATTCCATTTCAGTGGAC 3466
Query 3467 CTGTGGGTCTTTCCACTGGAAGTAAGTCCAAGCCTGCTCATTCCAAAGACGGGGTTTTGC 3526
|||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct 3467 CTGTAGGTCTTTCCACTGGAAGTAAGTCGAAGCCTGCTCATTCCAAAGACGGGATTTTGC 3526
Query 3527 GCGACCCTGTTGGAAATAACGATACAAAAGCGAAAGAGAGCAAAGAGGTTGAAGAGTATA 3586
||||| ||||||||||| | |||| ||||||||||||||||||||||||||||||||||
Sbjct 3527 GCGACGTTGTTGGAAATATCTATACGAAAGCGAAAGAGAGCAAAGAGGTTGAAGAGTATA 3586
Query 3587 ACTTATTTGCAAC-GAGCAATGGCCTGAGGTTTTCGTTATTCTAAATTAACGGTTTTGGG 3645
||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||
Sbjct 3587 ACTTATTTGCAACTG-GCAATGGCCTGAGGTTTTCGTTATTCTAAAGTAACGGTTTTGGG 3645
Query 3646 TTTGCTGTTGATTTAAACTGTGGATTGTGAGAG-GTTTCATGACTTTGTATCATCCGGAA 3704
|||| ||||||||||||||||||| |||||| | |||| |||||||||||||||||| ||
Sbjct 3646 TTTGTTGTTGATTTAAACTGTGGAGTGTGAG-GTGTTTTATGACTTTGTATCATCCGCAA 3704
Query 3705 CGTTATT-ATTCGTCTGGAAAACGAAACaaaaaaaTCTTTCAATTTTATACCttttttt 3762
||||||| ||||||||||||||| |||||||||| ||||||||||||| ||||||||||
Sbjct 3705 CGTTATTTATTCGTCTGGAAAACAAAACAAAAAA-TCTTTCAATTTTAAACCTTTTTTT 3762
> AT2G41960.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT3G58050.1);
Has 11991 Blast hits to 7260 proteins in 458 species: Archae
- 17; Bacteria - 481; Metazoa - 5028; Fungi - 1325; Plants
- 615; Viruses - 38; Other Eukaryotes - 4487 (source: NCBI
BLink). | chr2:17514118-17519293 REVERSE LENGTH=4052
Length=4052
Score = 1227 bits (664), Expect = 0.0
Identities = 1360/1687 (81%), Gaps = 84/1687 (5%)
Strand=Plus/Plus
Query 810 ATTCGACAGCAAG-AGATTTTGTAGAGACTGCAGACGAAATGTTATTCGTGAGTTCAAAG 868
||||||| ||||| || ||||||||||||||| || ||||||| ||||| ||||| ||||
Sbjct 998 ATTCGACTGCAAGAAG-TTTTGTAGAGACTGCCGAAGAAATGTCATTCGGGAGTTTAAAG 1056
Query 869 AGCTTAAGGAACTGAAACGAATGCGGAGAGAACCTCGATGTACC-ACATGGTTTTGTGTT 927
| ||||||||||| |||||||| | |||||| || |||||||| || ||||||||||||
Sbjct 1057 AACTTAAGGAACTTAAACGAATACAGAGAGATCCAAGATGTACCGAC-TGGTTTTGTGTT 1115
Query 928 GCCGATACAGCCTTCCAATATGAGGTATCCATTGATTCGGTGAAAGCAGACTGGCGGGAA 987
|||||||||||||| || |||||||| ||||||||| || |||||| ||| | ||
Sbjct 1116 GCCGATACAGCCTTTCAGTATGAGGTGGACATTGATTCTGTCCGAGCAGATTGGAGTCAA 1175
Query 988 -ACTTTTTCTGAGAATGCTGGAATGTACCATCATTTTGAGTGGGCAATTGGAACCGGAGA 1046
| |||| | ||||||||||| | || |||||||| |||||||| |||||||| |||||
Sbjct 1176 TA-TTTTACAGAGAATGCTGG-A--TATCATCATTTCGAGTGGGCTATTGGAACAGGAGA 1231
Query 1047 AGGAAAATGTGATATCCTCAAGTTTGAAA-ATGTTGGC-ATGAATGGGAGAGTTCAAGTC 1104
||| ||| |||||||||| || || ||| |||| ||| ||| || |||| | | ||||
Sbjct 1232 AGGCGAATCTGATATCCTCGAG-TTCAAATATGTAGGCAATG-ATCGGAGTGCCCGAGTC 1289
Query 1105 AATGGCCTAGACCTTCGTGGTTTAAATTCATGTTACATTACCCTTAGAGC-TTATAAATT 1163
|||||||||||||||||||| ||| || ||| |||||||| ||||| || || ||||
Sbjct 1290 AATGGCCTAGACCTTCGTGGATTACATGAATGCTACATTACTCTTAGGGCATT-TAAAAA 1348
Query 1164 AGATGGCCGCTGGTCTGAGGTATCCGTCAAAGCCCATGCATTAAAAGGTCAAAACTGTGT 1223
| |||||||| || || |||| ||||||||||||||||| | ||| ||| | || ||
Sbjct 1349 AAATGGCCGCCCCTCAGAAATATCTGTCAAAGCCCATGCATTGAGAGGCCAACAGTGCGT 1408
Query 1224 GCACGGCAGACTAGTAGTTGGGGATGGCTTTGTTTCAA-TAAAGAGAGGTGAAAGCATCC 1282
||| ||| || || |||||||||||||||||||||| |||| ||||| ||| |||| |
Sbjct 1409 TCACTCCAGGCTTGTGGTTGGGGATGGCTTTGTTTCAATTAAA-AGAGGGGAATGCATTC 1467
Query 1283 GAA-GATTTTTTGAGCATGCTGAAGAGGCTGAGGAAGAAGAGGATGAAGACATGATGGAC 1341
||| | ||||||||||||||||||||||||||||||||||||||||||| | |||| |||
Sbjct 1468 GAATG-TTTTTTGAGCATGCTGAAGAGGCTGAGGAAGAAGAGGATGAAGTCCTGATAGAC 1526
Query 1342 AAAGATGGGAATGAGCTTGATGGGGAATGCTCCCGTCCACAAAAGCATGCAAAAAGTCCA 1401
|||||||| ||||| |||||||| || |||| ||||||||||||||||| || ||||||
Sbjct 1527 AAAGATGGAAATGAACTTGATGGTGAGTGCTTGCGTCCACAAAAGCATGCTAAGAGTCCA 1586
Query 1402 GAACTTGCTCGAGAGTTTCTTCTAGATGCTGCGACAGTTATTTTTAAAGAACAGGTTGAA 1461
|||||||||||||||||||||||||||||||| || |||||||| || ||||||||||||
Sbjct 1587 GAACTTGCTCGAGAGTTTCTTCTAGATGCTGCAACGGTTATTTTCAAGGAACAGGTTGAA 1646
Query 1462 AAAGCATTCAGGGAAGGAACCGCTCGGCAAAATGCACACAGTATCTTTGTATGTCTTACA 1521
|| ||||| ||||| || || || || ||||||||||||||||| ||||| || ||| ||
Sbjct 1647 AAGGCATTTAGGGATGGTACAGCCCGTCAAAATGCACACAGTATATTTGTCTGCCTTTCA 1706
Query 1522 TTGAAACTATTAGAACAACGTGTACATGTTGCCTGCAAGGAAATTATCACCTTGGAGAAA 1581
| | |||| ||||| |||||||| ||| |||||||||| |||||| | |||||||||||
Sbjct 1707 TCGGAACTGTTAGAGCAACGTGTTCATATTGCCTGCAAAGAAATTGTTACCTTGGAGAAG 1766
Query 1582 CAGGTGAAACTTCTTgaggaagaagagaaggaaaagcgtgaagaagaggagcggaaagag 1641
||| |||||||| |||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 1767 CAGAACAAACTTCTCGAGGAAGAAGAGAAAGAAAAGCGTGAAGAAGAGGAGCGAAAAGA- 1825
Query 1642 aagaaaa-ga-tccaaagaaagggagaaaaaacttcgcagaaaggagagattgaaggaaa 1699
||| ||| || | ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1826 AAGGAAACGAATT-AAAGAAAGGGAGAAAAAACTTCGTAGAAAGGAGAGATTGAAGGAAA 1884
Query 1700 aagaaaaaggcaaggagaagaaaaaCCCTGAATCTAGCGATAAAGACA-TGCTGCTGAAT 1758
||||| | || ||| |||| || || ||| ||| ||||||| || | |||| |||
Sbjct 1885 AAGAACGCGAAAAAGAGCAGAAGAATCCAAAATTTAGTGATAAAG-CAATACTGCC-AAT 1942
Query 1759 TCAC--CAAGGGAAGAAGAAGA-TCTTCCCAACCTTGATGATAAGACAAATAATACCATA 1815
| | ||||||||||||||| ||| | || |||||||| | || || |||||||||
Sbjct 1943 T-ATGTCAAGGGAAGAAGAAGGCTCT-CGAAATCTTGATGAGGACACTAACAATACCATA 2000
Query 1816 A-ACTGCGAGGAGTCAGAAATTGAAACGGGGGATGCAGATTTGTCTCCACCTGGTTCTCC 1874
| | ||||||||||| | |||||||| || |||| |||||||||| |||||||||||||
Sbjct 2001 AGA-TGCGAGGAGTCCGGAATTGAAAATGGAGATGTAGATTTGTCTTCACCTGGTTCTCC 2059
Query 1875 TGATGTTCAAGA--AAGACAGTGTTTGGATGGTTGCCCTTCTCCAAGAGCGGAAAACCAC 1932
||||| |||||| |||| |||||||||||||||| ||||||||||| |||| ||||
Sbjct 2060 TGATGATCAAGATGAAGA--GTGTTTGGATGGTTGCATTTCTCCAAGAGTTGAAACCCAC 2117
Query 1933 TACT-GTGACAGCCCTGACA-G-AGAATTTACAGATCTTGAAGGTGAGAACGGGTACTTT 1989
| || |||| ||| |||| | | ||| || | ||||| ||||| ||| ||||| | ||||
Sbjct 2118 T-CTTGTGATAGCACTGATAAGGAGA-TT-ATAGATCATGAAGATGAAAACGGCTGCTTT 2174
Query 1990 ACAAATGATCATCAAAAAACTGTTCACCAGAATGCAAGAT-ATTGGAAAGAAGTGCAGTC 2048
||| | ||| | ||| ||| ||| || |||| || ||||||| || ||| |
Sbjct 2175 ACA------C--CAAGAC-CTGCTCATAAGACGGCGAGATTAT-GGAAAGAGGTTCAGAC 2224
Query 2049 TGATAATGCTTTGAGGTGGTCAGATAAACGCAGATATT-CGGATAATGCTTCGTTTGTCG 2107
|||| || ||||||||| |||||| |||||||||| || | || || |||| ||||||
Sbjct 2225 TGATCATTCTTTGAGGTTGTCAGAAAAACGCAGAT-TTACAGAGAAAACTTCTTTTGTCA 2283
Query 2108 GTAGGTCAGAGGCAAGATACCGTAATGATAGATTAGAAGTGCCTTCAAGGGG-ATTT-AA 2165
|||| || |||||| ||||| ||||||||||||||||| || |||| ||| | || ||
Sbjct 2284 GTAGTTCTGAGGCAGGATACTGTAATGATAGATTAGAAATGTCTTC--GGGACACTTCAA 2341
Query 2166 TGGGTCAAACAAACA-GTTAAGAGTTAAACCTTC-AAAGACTGGTGG---CCTGAATGGC 2220
||| ||| | ||| | || | |||| ||| |||| |||| ||||||| || ||| ||
Sbjct 2342 TGGCTCAGATAAAAATGTGA-GAGTGAAAGCTTCGAAAG-CTGGTGGTAGCCCAAATAGC 2399
Query 2221 A-TCAAGTCTCATGAGAAGTTTCAATGTTGC-GACAACAGGATCAG-TGAGAGGTTTGAC 2277
| | | |||||||||| ||||||| |||| | || ||||| | | |||||||| |||
Sbjct 2400 AGT-AGGTCTCATGAGGAGTTTCAGTGTT-CAGATGGCAGGA-CTGGTGAGAGGTATGA- 2455
Query 2278 TTAA-ATTCTTGCAGTTGCAAACCGAGTAGTGAATACCGGGCAAAAT-TAGAACCTAACA 2335
||| ||||||||||||||||||| | || || ||||||| |||| |||| |||| |
Sbjct 2456 TTACCATTCTTGCAGTTGCAAACCCATTAATGGTTACCGGG-AAAAGGTAGAGTCTAATA 2514
Query 2336 TC-TCTGCTACCAGAAGCATGCGAGAACCAAAAACAGTATCCAATTCTGACTCTGCTCCT 2394
| ||||| |||||| ||||||||||||| ||| |||||| ||| |||||||||| || |
Sbjct 2515 -CATCTGCAACCAGAGGCATGCGAGAACCGAAATCAGTATTCAAATCTGACTCTGATC-T 2572
Query 2395 G-ATGCCTCCAAGCCAGTGTTCCGAGGCAACAGGTATACTCAATCAGACCATACTCGTGA 2453
| ||| |||||||| | ||||| ||| |||||||||||||||| | ||| || ||
Sbjct 2573 GGATGTCTCCAAGCT--TAA-CCGAGCCAATAGGTATACTCAATCAGGCTATAGACGAGA 2629
Query 2454 GTTAAGA 2460
| |||||
Sbjct 2630 GATAAGA 2636
Score = 291 bits (157), Expect = 5e-77
Identities = 291/355 (82%), Gaps = 12/355 (3%)
Strand=Plus/Plus
Query 362 CTGTTCATCCATGGGGAGGTCTCGCCACGACACGTGAT-GGG-T-CACTCACGCTTCTTG 418
||||||||| ||||||||||||| |||| |||| | | ||| | | |||| |||||||
Sbjct 640 CTGTTCATCGATGGGGAGGTCTCACCACAACAC--GCTCGGGATGTA-TCACTCTTCTTG 696
Query 419 ATTGCTATTTGTAC-GCAAAGTCTCTCAAAGGACTTCAAAATGTGTTTGACAGCGCCCCT 477
| |||| |||| || ||||| || ||||||| ||||||||||| ||||| || || |
Sbjct 697 ACTGCTTTTTG-ACTGCAAAAACTTTCAAAGGGCTTCAAAATGTCTTTGAAAGTAACCGT 755
Query 478 GCTCGAGAAAGGGAACGTGAGTTGCTTTATCCTGATGCTTGTGGTGGTGGAGGTCGAGG- 536
|||||||| |||||||||||||||||||||||||||||||||||||| || ||||| ||
Sbjct 756 GCTCGAGAGAGGGAACGTGAGTTGCTTTATCCTGATGCTTGTGGTGGCGGTGGTCG-GGT 814
Query 537 ATGGATAAGTCAAGGAATGGCTAGCTATGGTAGAGGTCATGGAACTAGAGAAACGTGTGC 596
|||| | |||||||| || ||| | | ||||| |||||||||||| |||||||| |||
Sbjct 815 ATGGCTTAGTCAAGGGATTGCTGGTTTTGGTAAAGGTCATGGAACAAGAGAAACATGTAA 874
Query 597 TCTACATACTGCAAGGCTTTCTTGTGATACATTGGTAGATTTCTGGTCCGCACTC-AGCG 655
| | ||||| | ||||| |||||||||||||| || ||||| ||||| ||||| | |
Sbjct 875 TTTGCATACCACGAGGCTCTCTTGTGATACATTAGTGGATTTTTGGTCTGCACTTGAA-G 933
Query 656 AGGAAACTCGACAATCTCTTTTGAGGATGAAAGAAGAGGATTTTATGGAAAGACT 710
|| | | |||||| || |||||||| |||||||||||||||||| ||||||||||
Sbjct 934 AGCATAGTCGACAGTCACTTTTGAGAATGAAAGAAGAGGATTTTGTGGAAAGACT 988
Score = 102 bits (55), Expect = 2e-20
Identities = 90/106 (85%), Gaps = 5/106 (5%)
Strand=Plus/Plus
Query 2832 TTCAAACAACGGAAACACT-GAATCCTCCTCCACATCTGATTCTGAAGACGCCAGTCAGC 2890
||||||||| ||||||| | ||||||||||| | |||||||| |||| ||||||||||
Sbjct 2960 TTCAAACAATGGAAACA-TCGAATCCTCCTCGATGTCTGATTCCGAAGTTGCCAGTCAGC 3018
Query 2891 AATCTGAAGGAAGAGAGAGTATAGTTGTTGGTACACAGAACGATAT 2936
|||||||||||||||||| | |||| | | ||| |||||||||||
Sbjct 3019 AATCTGAAGGAAGAGAGAATCTAGT-G--GATACTCAGAACGATAT 3061
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 187373532105
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5