BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486264
Length=962
Score E
Sequences producing significant alignments: (Bits) Value
AT3G58130.1 | Symbols: | N-acetylglucosaminylphosphatidylinosi... 1170 0.0
AT2G27340.2 | Symbols: | N-acetylglucosaminylphosphatidylinosi... 1068 0.0
> AT3G58130.1 | Symbols: | N-acetylglucosaminylphosphatidylinositol
de-N-acetylase family protein | chr3:21527640-21529905
FORWARD LENGTH=1331
Length=1331
Score = 1170 bits (633), Expect = 0.0
Identities = 779/845 (92%), Gaps = 27/845 (3%)
Strand=Plus/Plus
Query 23 GATGGCTTGGCTTGTGGTTTCTCTTTCACTGATTGCTATATGGGTGGCTTCTTTCTGCAA 82
|||||| ||||||||||||||| |||| ||||||| ||||||| ||||||||||||||||
Sbjct 306 GATGGCATGGCTTGTGGTTTCTGTTTCTCTGATTGTTATATGGTTGGCTTCTTTCTGCAA 365
Query 83 AATTTTCTTCCGAGCAACATCTA----C----CT-C----C------A--GTAAAACCCT 121
||| ||||||||||||||||||| | || | | | |||||||||
Sbjct 366 AATATTCTTCCGAGCAACATCTATCTCCGGAGCTGCTATTCTTGATGATGGTAAAACCCC 425
Query 122 TCAGAAGAAAAATGTTA-TGTTCGTTATCGCACATCCCGATGATGAGTCAATGTTCTTTT 180
|||||||||||||| || |||| |||||||||||||| |||||||| || ||||||||||
Sbjct 426 TCAGAAGAAAAATG-TACTGTTTGTTATCGCACATCCTGATGATGAATCGATGTTCTTTT 484
Query 181 CTCCAACAATAAATTACTTAGCTTCCAATGCCTGCAATCTTCACATATTATGCTTCTCCA 240
||||||||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||
Sbjct 485 CTCCAACAATAAACTACTTAGCTTCCAATGCTTGCAATCTTCACATGTTATGCTTGTCCA 544
Query 241 CCGGTAACGCTGATGGTATGGGAAGCATTAGGAA-AGATGAGCTGCATCGAGCATGTGCG 299
| |||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||
Sbjct 545 CTGGTAACGCTGATGGTATGGGAAGCATTAGGAACA-ATGAGCTGCATCGGGCATGTGCG 603
Query 300 GTGCTCAAGGTTCCGCTTCAACAATTAAAGATTCTGGACCATCCTAATTTGCAGGATGGT 359
||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct 604 GTGCTCAAGGTTCCGCTTCAACAGTTAAAGATTCTGAACCATCCTAATTTGCAGGATGGT 663
Query 360 TTTGGGCAGTTATGGAGCCACGATTTGCTAACAGAGATCATCAAAGAAGAAGTCACTAAT 419
||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 664 TTTGGCCAATTATGGAGCCACGATTTGCTAACAGAGATCATCGAAGAAGAAGTCACTAAA 723
Query 420 CACGATATCCACACAATAATAACATTCGATAACTATGGTGTTTCGGGTCACTGCAATCAC 479
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 724 CACGATATCCACACAATAATAACATTCGATAACTATGGTGTTTCGGGTCATTGCAATCAC 783
Query 480 CGAGATGTGCATCGTGGAGTATTAAAGTTCTTGCAGACTAACTCAGGAAGAAATATCAAA 539
||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct 784 CGAGATGTGCATCGTGGAGTATTAAAGTTCTTGCAGACTAATTCAGGAAGAAATGTCAAA 843
Query 540 GCTTGGGAACTCATAAGCCTTAATATCTTTCGCAAGTACTTTGGACCTGTCGACATTTGG 599
|||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 844 GCTTGGGAACTCGTAAGCCTTAATATCTTTCGCAAGTACTGTGGACCTGTCGACATTTGG 903
Query 600 CTGTCAATTTTATCTGCCAAACA-ACATCCGAGTAAGGTAATCATCATAAACGAGCAGCC 658
|||||||||||||| |||||| | ||||||||| ||||||||||||||||||||||||||
Sbjct 904 CTGTCAATTTTATCCGCCAAA-ATACATCCGAGCAAGGTAATCATCATAAACGAGCAGCC 962
Query 659 TTGGAAAAGCTTCAAAGCAATGGCACAACATTTAAGCCAGTGGGTTTGGTTTCGGAAGCT 718
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 963 TTGGAAAAGCTTCAAAGCAATGGCACAACATTTAAGCCAGTGGGTTTGGTTTCGAAAGCT 1022
Query 719 TTTTGTTTCGTTTTCGAGCTATACATATGCGAATACACTTAATAGAATCAACGCTTGAGT 778
||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||
Sbjct 1023 TTTTGTTTCGTTTTCAAGCTATACATATGCGAATACACTTAGTAGAATCAACCCTTGAGT 1082
Query 779 CAAACGAGCTCTTGTGGAGGCAAAGCTGAAACGATTTTGAAGAAAAGCTGTAGCTTGTAA 838
|||| |||||||||| ||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1083 CAAAGGAGCTCTTGTCGAGGCAAAGCTGAAACGATTTTGAAGAAAAGTTGCAGCTTGTAG 1142
Query 839 TGTTG 843
|||||
Sbjct 1143 TGTTG 1147
> AT2G27340.2 | Symbols: | N-acetylglucosaminylphosphatidylinositol
de-N-acetylase family protein | chr2:11696737-11699224
FORWARD LENGTH=1456
Length=1456
Score = 1068 bits (578), Expect = 0.0
Identities = 717/782 (92%), Gaps = 18/782 (2%)
Strand=Plus/Plus
Query 30 TGGCTTGTGGTTTCTCTTTCACTGA---TTGCTATATGGGTGGCTTCTTTCTGCAAAATT 86
||| |||| |||| ||| || |||| ||| |||||||||||||||||||| |||||||
Sbjct 577 TGG-TTGTTGTTTTTCTATCTCTGATTGTTGTTATATGGGTGGCTTCTTTCTTCAAAATT 635
Query 87 TTCTTCCGAGCAACATCTACCTCC--AG-TA-AAACCCT--TCA---GAAGAAAAATGTT 137
||||||||||| ||||||| |||| || | | | | | | ||||||||||||
Sbjct 636 TTCTTCCGAGCTACATCTATCTCCAGAGCCACTATTCTTGATGATGGGAAGAAAAATGTG 695
Query 138 ATGTTCGTTATCGCACATCCCGATGATGAGTCAATGTTCTTTTCTCCAACAATAAATTAC 197
||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 696 ATGTTTGTTATCGCACATCCTGATGATGAGTCAATGTTCTTTTCTCCAACAATAAACTAC 755
Query 198 TT-AGCTTCCAATGCCTGCAATCTTCACATATTATGCTTCTCCACCGGTAACGCTGATGG 256
|| | |||||| |||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 756 TTCA-CTTCCACTGCCTGCAATCTTCACATCTTATGCTTCTCCACTGGTAACGCTGATGG 814
Query 257 TATGGGAAGCATTAGGAAAGATGAGCTGCATCGAGCATGTGCGGTGCTCAAGGTTCCGCT 316
|||||||||||||||| | | ||||||||||| ||||||||||||||||||||||||||
Sbjct 815 TATGGGAAGCATTAGGGACCAAGAGCTGCATCGGGCATGTGCGGTGCTCAAGGTTCCGCT 874
Query 317 TCAACAATTAAAGATTCTGGACCATCCTAATTTGCAGGATGGTTTTGGGCAGTTATGGAG 376
|||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 875 TCAACAGTTAAAGATTCTGGACCATCCAAATTTGCAGGATGGTTTTGGGCAATTATGGAG 934
Query 377 CCACGATTTGCTAACAGAGATCATCAAAGAAGAAGTCACTAATCACGATATCCACACAAT 436
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct 935 CCACGATTTGCTAACAGAGATCATCGAAGAAGAAGTCACTAATCACTATATCCACACAAT 994
Query 437 AATAACATTCGATAACTATGGTGTTTCGGGTCACTGCAATCACCGAGATGTGCATCGTGG 496
|||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct 995 AATAACATTCGATAACTATGGTGTTTGGGGTCATTGCAATCACCGAGATGTGCATCGTGG 1054
Query 497 AGTATTAAAGTTCTTGCAGACTAACTCAGGAAGAAATATCAAAGCTTGGGAACTCATAAG 556
|||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||
Sbjct 1055 AGTATTAAAGTTCTTGCAGACTAATTCAGGAAGAAATGTCAAAGCTTGGGAACTTGTAAG 1114
Query 557 CCTTAATATCTTTCGCAAGTACTTTGGACCTGTCGACATTTGGCTGTCAATTTTATCTGC 616
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||
Sbjct 1115 CCTTAATATCTTTCGCAAGTACTGTGGACCTGTCGACATTTGGCTGTCTATTTTATCCGC 1174
Query 617 CAAACA-ACATCCGAGTAAGGTAATCATCATAAACGAGCAGCCTTGGAAAAGCTTCAAAG 675
|||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1175 CAAA-AGACATCCGAGTAAGGTAATCATCATAAACAAGCAGCCTTGGAAAAGCTTCAAAG 1233
Query 676 CAATGGCACAACATTTAAGCCAGTGGGTTTGGTTTCGGAAGCTTTTTGTTTCGTTTTCGA 735
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct 1234 CAATGGCACAACATTTAAGCCAGTGGGTTTGGTTTCGGAAGCTTTTTGTTTTGTTTTCAA 1293
Query 736 GCTATACATATGCGAATACACTTAATAGAATCAACGCTTGAGTCAAACGAGCTCTTGTGG 795
|||||||||||| |||||||||| ||||||||||| || ||||||||||||||||||| |
Sbjct 1294 GCTATACATATGTGAATACACTTGATAGAATCAACCCT-GAGTCAAACGAGCTCTTGTAG 1352
Query 796 AG 797
||
Sbjct 1353 AG 1354
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 47069395739
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5