BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg486283

Length=498
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G58300.1 | Symbols:  | Arabidopsis phospholipase-like protei...   671    0.0  


> AT3G58300.1 | Symbols:  | Arabidopsis phospholipase-like protein 
(PEARLI 4) family | chr3:21582764-21583390 REVERSE LENGTH=546
Length=546

 Score =  671 bits (363),  Expect = 0.0
 Identities = 413/438 (94%), Gaps = 0/438 (0%)
 Strand=Plus/Plus

Query  1    ATGGTGAGGAAGACAGAGAGTAGTGAATCTAGCGATGATGAACAGAGATACTCGTCTTCA  60
            |||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct  1    ATGGCGAGGAACACAGAGGGTAGTGAATCTAGCGATGATGAACAGAGATACTCGTCTTCA  60

Query  61   TCTGAAGAATGGTCGGAGGACTCCTCAGACGATGTTAATGAAATTGTTGAAGTCAATGGG  120
            |||||||||||||||||||| || ||||| |||| | |||||||||||||||||||||||
Sbjct  61   TCTGAAGAATGGTCGGAGGAGTCGTCAGAAGATGCTCATGAAATTGTTGAAGTCAATGGG  120

Query  121  TTTCAAATTCTTGATTCGCAGGTAAGCCAAGTGAATGCAATCTTTGAAAAACATCCAGAC  180
            ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct  121  TTTCAGATTCTTGATTCACAGGTAAGCCAAGTGAATGCAATCTTTGAAAAACATCCAGAC  180

Query  181  ATTGCATCAGATTTCAGTTTAAAGAACCAACAGCTCAAAAATGCTTACATGGGTGTTCTT  240
            |||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct  181  ATTGCATCGGACTTCAATTTAAAGAACCAACAGCTCAAAAATGCTTACATGGGTGTTCTT  240

Query  241  CTCGACCTAATCATGACACTGTGCCAATCGCCTAAGGAGCTCACGATGAACGATCTAAAC  300
            || |||||||| ||||||||||||| | |||||||||||||||| ||| |||||||||||
Sbjct  241  CTTGACCTAATTATGACACTGTGCCGACCGCCTAAGGAGCTCACAATGGACGATCTAAAC  300

Query  301  AAAGCAGACCGCACGATTTTGGATCTGACAAAAGCTGGCTTGAGGTTGCATTGGTTGCGT  360
            ||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||
Sbjct  301  AAAGCAGACCGCACGGTTTTGGATCTGACAAAAGCTGGCTTGAAGTTGCAATGGTTGCGT  360

Query  361  CAGAAACTGGACGAAGCTTTCTTGAAGAAGGAGaaaaaaaGAGCCATTGGGGCACGGATC  420
            ||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct  361  CAGAAACTGGACGAAGCTTTCTTGAAGAAGGAGAAAAAACGGGACATTGGGGCACGGATC  420

Query  421  AGAGAACTTGAGGAACAA  438
            ||||||||||||||||||
Sbjct  421  AGAGAACTTGAGGAACAA  438


 Score =  106 bits (57),  Expect = 2e-22
 Identities = 59/60 (98%), Gaps = 0/60 (0%)
 Strand=Plus/Plus

Query  439  AAACAGAAAGCTGCGGCTTTGGCTGCTGAAACTCCGTTTGATTTCAGCGATGTTGTTTGA  498
            ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct  487  AAACAGAAAGCTGCGGCTTTGGCAGCTGAAACTCCGTTTGATTTCAGCGATGTTGTTTGA  546



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 23760751531


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5