BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486301
Length=2310
Score E
Sequences producing significant alignments: (Bits) Value
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prot... 3755 0.0
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosp... 1716 0.0
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosp... 1312 0.0
> AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21639978-21643795 FORWARD LENGTH=2348
Length=2348
Score = 3755 bits (2033), Expect = 0.0
Identities = 2230/2323 (96%), Gaps = 22/2323 (1%)
Strand=Plus/Plus
Query 2 TAACATGTCTATTTTATCGCGTTGTGTCCGATCCAAAAGTTTCTTTATTTTT-GCGGATA 60
||||||||||||||||||||||||||||||||||| ||| |||| ||||||| | |||||
Sbjct 34 TAACATGTCTATTTTATCGCGTTGTGTCCGATCCAGAAGGTTCTCTATTTTTCGTGGATA 93
Query 61 AGAAGGATAAAGTTATCGTTTATTGATAAGTTTTCTGCTGGGAAGTTGCAACTTTTTCTA 120
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 94 AGAA-GATAAAGTTATTGTTTATTGATAAGTTTTCTGCTGGGAAGTTGCAACTTTTTCTA 152
Query 121 GATTTAGGACGTTACAAATTTCAATCATGAGTGCATCATGGGCAGATGTGGCTGATTCAG 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 153 GATTTAGGACGTTACAAATTTCAATCATGAGTGCATCATGGGCAGATGTGGCTGATTCAG 212
Query 181 AGAAGGCCGGTTCTAAGCCAAAGACTTCTTACGTTCCCCCACACCTACGGAACAGGCCAT 240
||||||||| |||| || ||||| || |||| ||||||||||||||||||||||||||||
Sbjct 213 AGAAGGCCGTTTCTCAGTCAAAGCCTCCTTATGTTCCCCCACACCTACGGAACAGGCCAT 272
Query 241 CAGAGCCTGCTGCTGCTCCTTTGCCACAAAATGATCATGCAGGGTATGGTGGTCAACCAG 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 273 CAGAGCCTGTTGCTGCTCCTTTGCCACAAAATGATCATGCAGGGTATGGTGGTCAACCAG 332
Query 301 CTGGGTCTCGATGGGCTCCTCCTAGCAGTGGGGTTGGTGGTGGCAGCAGCGGTGGCTATA 360
|||||||||| |||||||||||||||||||||| |||||||| |||| ||||||||||||
Sbjct 333 CTGGGTCTCGTTGGGCTCCTCCTAGCAGTGGGGGTGGTGGTGCCAGCGGCGGTGGCTATA 392
Query 361 GGAATGATGGAGGGCGCCCTGGCTATGGTTAT-G-G-TGGAGGAGGA---GGAGGTGGTG 414
||||||||||||||||| |||||||||||||| | | |||||||||| || |||||||
Sbjct 393 GGAATGATGGAGGGCGCACTGGCTATGGTTATGGTGCTGGAGGAGGAGGTGGTGGTGGTG 452
Query 415 GTGGCTGGAACAACAGAAGTGGAGGGTGGGACCGTAGGGAACGTGAAGTAAACCCATTTG 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 453 GTGGCTGGAACAACAGAAGTGGAGGGTGGGACCGTAGGGAACGTGAAGTAAACCCATTTG 512
Query 475 GAGATGATGCTGAGTTAGAACCGGTCTTTACGGAGCAGGAGAATACAGGCATTAATTTTG 534
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 513 GAGATGATGCTGAGTTAGAACCGGTCTTTACAGAGCAGGAGAATACTGGCATTAATTTTG 572
Query 535 ATGCCTATGAAGATATTCCAGTTGAGACCAGTGGGGGAGACGTGCCTCCTCCTGTTAACA 594
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 573 ATGCCTATGAAGATATTCCAGTTGAGACCAGTGGGGGAGACGTGCCCCCTCCTGTTAACA 632
Query 595 CATTTGCAGACATAGACCTTGGGGATGCATTAAATCTGAACATCCGGAGGTGCAAGTACG 654
||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 633 CATTTGCTGACATAGATCTTGGGGATGCATTAAATCTGAACATCCGGAGGTGCAAGTATG 692
Query 655 TGAGGCCAACACCGGTACAGCGTCATGCTATTCCAATACTGCTTGCAGAGAGGGATTTGA 714
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 693 TGAGGCCAACACCGGTACAGCGTCATGCTATTCCAATACTGCTTGCAGAGAGAGATTTGA 752
Query 715 TGGCCTGTGCACAGACAGGGTCTGGGAAGACGGCTGCTTTTTGCTTTCCAATAATTAGTG 774
|||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct 753 TGGCCTGTGCCCAGACTGGGTCTGGGAAGACTGCTGCTTTTTGCTTTCCAATAATTAGTG 812
Query 775 GAATCATGAAAGATCTGCATGTACAGAGACCCCGTGGTTCACGGGCGGTTTACCCTTTTG 834
||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 813 GAATCATGAAAGATCAGCATGTAGAAAGACCCCGTGGTTCACGGGCGGTTTACCCTTTTG 872
Query 835 CAGTCATCCTCTCACCAACAAGGGAATTGGCATGCCAGATACATGATGAAGCCAAAAAAT 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 873 CAGTCATCCTCTCACCAACAAGGGAATTGGCATGCCAGATACATGATGAAGCCAAAAAAT 932
Query 895 TCTCCTACCAAACTGGTGTGAAGGTTGTTGTTGCTTATGGAGGAACACCTATTCACCAGC 954
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 933 TCTCCTACCAAACTGGTGTGAAGGTTGTTGTTGCTTATGGAGGAACACCCATTCACCAGC 992
Query 955 AGCTCAGGGAACTCGAGAGGGGC-GTTGATATCCTTGTGGCAACTCCTGGCCGGTTAAAT 1013
|||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 993 AGCTCAGGGAACTCGAGAGGGGATGT-GATATCCTTGTGGCAACTCCTGGCCGGTTAAAT 1051
Query 1014 GATTTGCTAGAGAGAGCTAGAGTCTCAATGGAGATGATTAAATTTTTAGCTCTTGATGAG 1073
|||||||| || |||||||||||||||||| ||||||||| ||||||||||| ||||||
Sbjct 1052 GATTTGCTTGAAAGAGCTAGAGTCTCAATGCAGATGATTAGGTTTTTAGCTCTAGATGAG 1111
Query 1074 GCAGACAGGATGCTGGACATGGGTTTTGAGCCACAAATTAGAAAGATTGTTGAACAGATG 1133
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 1112 GCAGACAGGATGCTGGACATGGGTTTTGAGCCACAGATTAGAAAGATTGTTGAGCAGATG 1171
Query 1134 GACATGCCTCCACGTGGGGTGAGACAGACAATGTTGTTCAGTGCTACATTTCCAAGGGAG 1193
||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct 1172 GACATGCCTCCACGTGGGGTGAGACAGACAATGCTGTTCAGTGCTACATTTCCAAGTCAG 1231
Query 1194 ATCCAGAGACTTGCAGCTGATTTCATGTCAAACTATATATTTTTGGCTGTGGGAAGAGTT 1253
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1232 ATTCAGAGACTTGCAGCTGATTTCATGTCAAACTATATATTTTTGGCTGTGGGAAGAGTT 1291
Query 1254 GGTTCAAGCACTGATTTAATTACCCAAAGGGTTGAGTTTGTCCAAGAGTCTGACAAGAGA 1313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1292 GGTTCAAGCACTGATTTAATTACCCAAAGGGTTGAGTTTGTCCAAGAGTCTGACAAGAGA 1351
Query 1314 AGCCATCTCATGGACCTGCTTCATGCGCAGAGAGAGACCCAAGACAAGCAATCATTGACA 1373
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 1352 AGCCATCTCATGGACCTGCTTCACGCGCAAAGAGAGACCCAAGACAAGCAATCATTGACA 1411
Query 1374 TTGGTTTTTGTGGAGACAAAGAGGGGAGCTGATACTTTGGAAAATTGGCTGTGCATGAAT 1433
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1412 TTAGTTTTTGTGGAGACAAAGAGGGGAGCTGATACTTTGGAAAATTGGCTGTGCATGAAT 1471
Query 1434 GAGTTTCCAGCAACCTCCATTCATGGCGATAGAACACAACAGGAAAGAGAAGTGGCACTG 1493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1472 GAGTTTCCAGCAACCTCCATTCATGGCGATAGAACACAACAGGAAAGAGAAGTGGCACTG 1531
Query 1494 AGGTCCTTCAAAACTGGGAGAACACCTATTTTGGTTGCAACAGACGTGGCAGCACGTGGT 1553
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1532 AGGTCCTTCAAAACTGGGAGGACACCTATTTTGGTTGCAACAGACGTGGCAGCACGTGGT 1591
Query 1554 CTTGACATTCCCCACGTGGCTCATGTTGTAAACTTTGATCTACCAAATGACATCGATGAC 1613
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 1592 CTTGACATTCCCCACGTGGCTCATGTTGTAAACTTCGATCTACCAAATGACATTGATGAC 1651
Query 1614 TATGTCCACCGTATCGGACGAACAGGACGTGCCGGCAAATCGGGAATAGCAACTGCCTTC 1673
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 1652 TATGTCCACCGTATCGGACGAACAGGACGTGCAGGCAAATCTGGAATAGCAACTGCCTTC 1711
Query 1674 TTCAACGAGAACAATGCACAAATGGCTAGGTCGCTTGCTGAGCTGATGCAAGAAGCCAAT 1733
||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct 1712 TTCAACGAGAACAATGCACAACTGGCTAGGTCGCTTGCTGAGCTAATGCAAGAAGCCAAT 1771
Query 1734 CAAGAGGTGCCCGAGTGGCTCACACGATACGCTTCACGTGCTTCATTTGGTGGTGGTAAG 1793
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1772 CAAGAGGTCCCCGAGTGGCTCACACGATATGCTTCACGTGCTTCATTTGGTGGTGGTAAG 1831
Query 1794 AAACGGTCTGGTGGTCGGTTTGGTGGCCGTGACTTCAGAAGGGAAGGCTCTTACAGTAGA 1853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1832 AAACGGTCTGGTGGTCGGTTTGGTGGCCGTGACTTCAGAAGGGAAGGCTCTTACAGTAGA 1891
Query 1854 GGAGG---CGGTGGAGG---AGGCGGTGGCAATGATTACTATGGCGGAGGAGGCTATGGT 1907
||||| ||| || || ||| || |||| ||||||||||||||||||||||||||||
Sbjct 1892 GGAGGAGGCGGCGGCGGCGGAGGAGGCGGCAGTGATTACTATGGCGGAGGAGGCTATGGT 1951
Query 1908 GGTGGTGGATATGGTGGTGCTCCAAGCGGTGGGTATGGTGCTGGAGTGACCAGTGCTTGG 1967
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1952 GGTGGTGGATACGGTGGTGCTCCAAGCGGTGGGTATGGTGCTGGAGTGACCAGTGCTTGG 2011
Query 1968 GATTAGCCAATTAGGCTCCCCAATTTTTCCTCTTTTTAACATGACTATTTATTTCTTCTC 2027
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2012 GATTAGCCAATTAGGCTCCCCAATTTTTCCTCTTTTTAACCTGACTATTTATTTCTTCTC 2071
Query 2028 TTCTACATTCCCAAGAGAGTACATGTATTTGCCCCCACCTTTGAGATCTCTCATTCAAGA 2087
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 2072 TTCTACATTCCCAAGAGAGCACGTGTATTTGCCCCCACCTTTGAGATCTCTCATTCAAGA 2131
Query 2088 GATGGATTTAACTAATCTTGCTATTAGGTGAATCTCTCTGttttttcaggctattttttt 2147
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2132 GATGGATTTAACTAATCTTGCTATTAGGTGGATCTCTCTGTTTTTTCAGGCTATTTTT-- 2189
Query 2148 taggatttttcctaaaagataggcagtagttttttttccgattttGATCATGTGCTTGGT 2207
||||||| ||||||||||||| ||||||||||| |||||||||||| ||| ||||||
Sbjct 2190 -AGGATTTGTCCTAAAAGATAGACAGTAGTTTTT---CCGATTTTGATCTTGTTCTTGGT 2245
Query 2208 TTCTTCTAACAATTTCATTTGTTAGTTTGAAATCCAATTTGTCTTTTTGTTTCCCTTTGT 2267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2246 TTCTTCTAACAATTTCATTTGTTAGTTTGAAATCCAATTTGTCTTTTTGTTTCCCTTTGT 2305
Query 2268 TGTTGACAATCTTTCTTGGTGAAATACAATCTCTCTTTATATC 2310
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 2306 TGTTGACAATCTTTCTTGGTGAAATACAATCTCTCTTTATATC 2348
> AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17704832-17708947
FORWARD LENGTH=2252
Length=2252
Score = 1716 bits (929), Expect = 0.0
Identities = 1484/1747 (85%), Gaps = 58/1747 (3%)
Strand=Plus/Plus
Query 208 CTTACGTTCCCCCACACCTACGGAACAGGCCATCAGAGCCT--G-CTGCTGCTCCTTTGC 264
|||| ||||| ||||| ||| ||||||||||| ||| || | ||| |||||| ||||
Sbjct 233 CTTATGTTCCTCCACATCTAAGGAACAGGCCAGCAGCTTCTGAGCCTGTTGCTCCATTGC 292
Query 265 CA-CAAAATGATCATGCAGGGTATGGTGGTCAACCAGCTGGGTCTCGATGGGCTCCTCCT 323
|| | ||||||| || ||| |||||||||| ||| |||| ||||||||||||||| |
Sbjct 293 CAGC-TAATGATCGTGTAGGTTATGGTGGTCCACCTTCTGGCTCTCGATGGGCTCCTGGT 351
Query 324 AGCAGTGGGGTTGGTGGTGGCA-GCAGCGGTGGCTATAGGAATGATGGAGGGCGCCCTGG 382
| ||||| ||||||| ||| | | | ||||| |||||| ||||| ||| || |||||
Sbjct 352 GGTAGTGGTGTTGGTGTTGG-AGGTGGTGGTGGTTATAGGGCTGATGCAGGTCGTCCTGG 410
Query 383 CTATGGTTATGGTGGA-GGAGGAGGAGGTGGTGGTGGCTGGAACAACAGAAGTGGAGGGT 441
|| ||| | ||| | || ||| |||| |||||||| |||||||||||||| |||||||
Sbjct 411 CTCTGGCTCTGG-CTATGGTGGACGAGGAGGTGGTGGTTGGAACAACAGAAGCGGAGGGT 469
Query 442 GGGACCGTAGGGAACGTGAAGTAAACCCATTTGGAGATGATGCT---GAGTTAGAACCGG 498
|||||||||||||||||||||||||||| |||| | |||||| | || |||||| |
Sbjct 470 GGGACCGTAGGGAACGTGAAGTAAACCCCTTTGAAAATGATGATTCCGAACCAGAACCAG 529
Query 499 TCTTT-ACGGAGCAGGAGAATACAGGC-ATTAATTTTGATGCCTATGAAGATATTCC-AG 555
|||| || |||||||| ||||| || ||||||||||||||||||||||||||||| |
Sbjct 530 -CTTTTACTGAGCAGGATAATAC-GGTTATTAATTTTGATGCCTATGAAGATATTCCGA- 586
Query 556 TTGAGACCAGTGGGGGAGAC-GTGCCTCCTCCTGTTAACACATTTGCAGACATAGACCTT 614
||||||||||||||| | | ||||||||||||||||||||||| ||||| ||||| ||
Sbjct 587 TTGAGACCAGTGGGG-ATAATGTGCCTCCTCCTGTTAACACATTCGCAGAGATAGATCTC 645
Query 615 GGGGATGCATTAAATCTGAACATCCGGAGGTGCAAGTACGTGAGGCCAACACCGGTACAG 674
||||| ||||| ||||| || ||||| || ||||| || || | ||||||||| || |||
Sbjct 646 GGGGAGGCATTGAATCTAAATATCCGTAGATGCAAATATGTTAAGCCAACACCTGTTCAG 705
Query 675 CGTCATGCTATTCCAATACTGCTTGCAGAGAGGGATTTGATGGCCTGTGCACAGACAGGG 734
|||||||| ||||| ||| |||||| || ||||||||||||||||||||| |||||||||
Sbjct 706 CGTCATGCGATTCCGATATTGCTTGAAGGGAGGGATTTGATGGCCTGTGCTCAGACAGGG 765
Query 735 TCTGGGAAGACGGCTGCTTTTTGCTTTCCAATAATTAGTGGAATCATGAAAGATCTGCAT 794
|| |||||||| |||||||||||||||||||| ||||||||||| |||||||||| ||||
Sbjct 766 TCGGGGAAGACAGCTGCTTTTTGCTTTCCAATCATTAGTGGAATAATGAAAGATCAGCAT 825
Query 795 GTACAGAGACCCCGTGGTTCACGGGCGGTTTACCCTTTTGCAGTCATCCTCTCACCAACA 854
||||||||||||||||||||||| | || |||||| ||||||| || ||||||||||||
Sbjct 826 GTACAGAGACCCCGTGGTTCACGAACAGTCTACCCTCTTGCAGTTATTCTCTCACCAACA 885
Query 855 AGGGAATTGGCATGCCAGATACATGATGAAGCCAAAAAATTCTCCTACCAAACTGGTGTG 914
|| || |||||| | |||||||||||||| || ||||| ||||| |||||||||||||||
Sbjct 886 AGAGAGTTGGCAAGTCAGATACATGATGAGGCTAAAAAGTTCTCTTACCAAACTGGTGTG 945
Query 915 AAGGTTGTTGTTGCTTATGGAGGAACACCTATTCACCAGCAGCTCAGGGAACTCGAGAGG 974
||||| |||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||
Sbjct 946 AAGGTGGTTGTTGCATATGGAGGAACACCTATTAACCAGCAGCTCCGGGAACTTGAGAGG 1005
Query 975 GGCGTTGATATCCTTGTGGCAACTCCTGGCCGGTTAAATGATTTGCTAGAGAGAGCTAGA 1034
|| || ||||| ||||||||||| ||||| || |||||||||||||| ||||||||||||
Sbjct 1006 GGAGTCGATATTCTTGTGGCAACGCCTGGTCGATTAAATGATTTGCTCGAGAGAGCTAGA 1065
Query 1035 GTCTCAATGGAGATGATTAAATTTTTAGCTCTTGATGAGGCAGACAGGATGCTGGACATG 1094
||||||||| ||||||||| ||||||||||||||||||||| || || ||||| ||||||
Sbjct 1066 GTCTCAATGCAGATGATTAGATTTTTAGCTCTTGATGAGGCCGATAGAATGCTTGACATG 1125
Query 1095 GGTTTTGAGCCACAAATTAGAAAGATTGTTGAACAGATGGACATGCCTCCACGTGGGGTG 1154
|||||||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||
Sbjct 1126 GGTTTTGAACCACAAATTAGAAAGATTGTCGAACAAATGGACATGCCTCCACGTGGAGTT 1185
Query 1155 AGACAGACAATGTTGTTCAGTGCTACATTTCCAAGGGAGATCCAGAGACTTGCAGCTGAT 1214
||||||||| ||||||| ||||||||||||||||| || || |||||||| ||||||||
Sbjct 1186 AGACAGACACTGTTGTTTAGTGCTACATTTCCAAGAGAAATTCAGAGACTCGCAGCTGAC 1245
Query 1215 TTCAT-GTCAAACTATATATTTTTGGCTGTGGGAAGAGTTGGTTCAAGCACTGATTTAAT 1273
||| | | |||| |||||||||||||||||||| ||||| |||||||| || ||||||||
Sbjct 1246 TTCCTAG-CAAATTATATATTTTTGGCTGTGGGTAGAGTGGGTTCAAGTACCGATTTAAT 1304
Query 1274 TACCCAAAGGGTTGAGTTTGTCCAAGAGTCTGACAAGAGAAGCCATCTCATGGACCTGCT 1333
| |||||||||||||||||||| || |||||||| ||||| |||||||||||||||||
Sbjct 1305 TGTCCAAAGGGTTGAGTTTGTCCTTGACTCTGACAAAAGAAGTCATCTCATGGACCTGCT 1364
Query 1334 TCATGCGCAGAGAGAGA----C--CCAAGACAAGCAATCATTGACATTGGTTTTTGTGGA 1387
||| || |||||||||| | ||||| ||||||| | |||| || |||||||||||
Sbjct 1365 TCACGCTCAGAGAGAGAATGGCATCCAAGGCAAGCAAGCCCTGACCTTAGTTTTTGTGGA 1424
Query 1388 GACAAAGAGGGGAGCTGA-TACTTTGGAAAATTGGCTGTGCATGAATGAGTTTCCAGCAA 1446
||||||||| |||||||| | |||||||||||||| ||||||| |||| |||||||||||
Sbjct 1425 GACAAAGAGAGGAGCTGACT-CTTTGGAAAATTGGTTGTGCATCAATGGGTTTCCAGCAA 1483
Query 1447 CCTCCATTCATGGCGATAGAACACAACAGGAAAGAGAAGTGGCACTGAG-GTCCTTCAAA 1505
|||||||||| || || |||||||| |||||||||||||||||| ||| | |||||||
Sbjct 1484 CCTCCATTCACGGTGACAGAACACAGCAGGAAAGAGAAGTGGCATTGAAAG-CCTTCAAG 1542
Query 1506 ACTGGGAGAACACCTATTTTGGTTGCAACAGACGTGGCAGCACGTGGTCTTGACATTCCC 1565
| |||||||||||| |||||||||||||| || || ||||||||||| ||||||||||||
Sbjct 1543 AGTGGGAGAACACCGATTTTGGTTGCAACTGATGTAGCAGCACGTGGCCTTGACATTCCC 1602
Query 1566 CACGTGGCTCATGTTGTAAACTTTGATCTACCAAATGACATCGATGACTATGTCCACCGT 1625
|||||||||||||| || ||||| ||||| ||||||||||| ||||||||||||||||||
Sbjct 1603 CACGTGGCTCATGTGGTCAACTTCGATCTGCCAAATGACATTGATGACTATGTCCACCGT 1662
Query 1626 ATCGGACGAACAGGACGTGCCGGCAAATCGGGAATAGCAACTGCCTTCTTCAACGA-G-- 1682
|| ||||||||||||||||| |||||||| ||| |||||||||||||||||||||| |
Sbjct 1663 ATTGGACGAACAGGACGTGCTGGCAAATCAGGACTAGCAACTGCCTTCTTCAACGATGGC 1722
Query 1683 AACAA-TGCACAAATGGCTAGGTCGCTTGCTGAGCTGATGCAAGAAGCCAATCAAGAGGT 1741
|||| | ||| |||| || |||| |||||||||||||||||||| || ||||| ||
Sbjct 1723 AACACCT-CAC---TGGCCAGACCGCTCGCTGAGCTGATGCAAGAAGCTAACCAAGAAGT 1778
Query 1742 GCCC-GAGTGGCTCACACGATACGCTTCACG-TGCTTCATTTGGTGGTGGTAAGAAACGG 1799
||| ||||||||||| || || || ||||| | || | ||||||||||||||||| |||
Sbjct 1779 -CCCTGAGTGGCTCACTCGGTATGCGTCACGGTCCT-CTTTTGGTGGTGGTAAGAACCGG 1836
Query 1800 ---TCTGGTGGTCGGTTTGGTGGCCGTGACTTCAGAAGGGAAGGCTCTTACAGTAGAGG- 1855
||||||||||| ||||||||||||||||| ||||||||||| |||| | |||| ||
Sbjct 1837 CGGTCTGGTGGTCGATTTGGTGGCCGTGACTTTAGAAGGGAAGGGTCTTTCGGTAGCGGT 1896
Query 1856 AGGCGGTGGAGGA-GGCGGTGGCA--ATGATTACTATGGCGG---AGGAGGCTATGGTGG 1909
|| || || | |||||||| | | || |||||||| |||||||||||||||
Sbjct 1897 AGA-GGAGGCT-ATGGCGGTGG-AGGAGGAGGG-TATGGCGGCGGAGGAGGCTATGGTGG 1952
Query 1910 TGGTGGA 1916
||| |||
Sbjct 1953 TGGAGGA 1959
> AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21656504-21660532
FORWARD LENGTH=2341
Length=2341
Score = 1312 bits (710), Expect = 0.0
Identities = 1255/1511 (83%), Gaps = 66/1511 (4%)
Strand=Plus/Plus
Query 390 TATGGTGG-AGGAGGAGGAGGTGGT-GGTGGCTGGAACAACAGAAGTGGAGGGTGGGACC 447
|||||||| | ||||||| | || || || ||||| |||||||||||| |||||||
Sbjct 455 TATGGTGGTA-GAGGAGGTCCT-GTGGGCGGTTGGAATGCCAGAAGTGGAGGTTGGGACC 512
Query 448 GTAGGGA-ACGTG-AAGTAAACCCATTTGG-AGATGATGCTG-AGT-TAGAACCGGTCT- 501
|| |||| || || || | ||||| ||||| | |||||| | | | ||| |||| ||
Sbjct 513 GTCGGGATAC-TGAAACT-AACCCGTTTGGTA-ATGATG--GAAATGCAGACCCGG-CTG 566
Query 502 TT-ACGGAGCAGGAGAATACAGGCATTAATTTTGATGCCTATGAAGATATT-CCAGTTGA 559
|| || |||||||| || || | |||||| ||||| ||||||||||||||| ||| | ||
Sbjct 567 TTAAC-GAGCAGGAAAACACTGTCATTAACTTTGAGGCCTATGAAGATATTCCCA-TCGA 624
Query 560 GACCAGTGGGGGA-GACGTGCCTCCTCCTGTTAACACATTTGCAGACATAGACCTTGGGG 618
||| ||| ||||| | ||||| ||||||||||| ||||||||||| |||||||| || |
Sbjct 625 GACAAGT-GGGGATAATGTGCCACCTCCTGTTAATACATTTGCAGAGATAGACCTCGGAG 683
Query 619 ATGCAT-TAAATCTGAACATCCGGAGGTGCAAGTACGTGAGGCCAACACCGGTACAGCGT 677
| || | | ||||| || |||| ||||||||| ||||||| ||| || || || ||||||
Sbjct 684 AAGC-TCTCAATCTAAATATCCAGAGGTGCAAATACGTGAAGCCGACCCCTGTGCAGCGT 742
Query 678 CATGCTATTCCAATACT-GCTTGCA-GAGAGGGATTTGATGGCCTGTGCACAGACAGGGT 735
|||| ||||| ||| | || |||| || |||||||||||||| ||||| |||||||| |
Sbjct 743 AATGCAATTCCCATATTGGC-TGCAGGA-AGGGATTTGATGGCTTGTGCTCAGACAGGCT 800
Query 736 CTGGGAAGACGGCTGCTTTTTGCTTTCCAATAATTAGTGGAATCATGAAAGATCTGCATG 795
|||||||||| ||||| ||||| ||||| || |||||||| || ||||| |||| ||||
Sbjct 801 CTGGGAAGACAGCTGCCTTTTGTTTTCCGATTATTAGTGGGATTATGAAGGATCAGCATA 860
Query 796 TACAGAGACCCCGT-G-GTTCACGGGCG-GTTTACCCTTTTGCAGTCATCCTCTCACCAA 852
|| ||||||| ||| | ||| |||| | || || ||| |||| ||||| ||||||||||
Sbjct 861 TAGAGAGACCACGTGGAGTT--CGGG-GAGTCTATCCTCTTGCTGTCATTCTCTCACCAA 917
Query 853 CAAGGGAATTGGCATGCCAGATACATGATGAAGCCAAAAAATTCTCCTACCAAACTGGTG 912
||||||||||||| |||||||||||||||||||||| ||| |||||||| |||||||| |
Sbjct 918 CAAGGGAATTGGCTTGCCAGATACATGATGAAGCCAGAAAGTTCTCCTATCAAACTGGAG 977
Query 913 TGAAGGTTGTTGTTGCTTATGGAGGAACACCTATTC-ACCAGCAGCTCAGGGAACTCGAG 971
|||| ||||| |||||||| ||||||||||| | || |||| ||| | ||||| || ||
Sbjct 978 TGAAAGTTGTGGTTGCTTACGGAGGAACACC-AGTCAACCAACAGATTAGGGAGCTTGAA 1036
Query 972 AGGGGCGTTGATATCCTTGTGGCAACTCCTGGCCGGTTAAATGATTTGCTAGAGAGAGCT 1031
|| || |||||||| ||||| ||||||||||| | |||||||||||||| ||||||| |
Sbjct 1037 AGAGGAGTTGATATTCTTGTTGCAACTCCTGGGAGATTAAATGATTTGCTTGAGAGAGGT 1096
Query 1032 AGAGTCTCAATGGAGATGATTAA-ATTTTTAGCTCTTGATGAGGCAGACAGGATGCTGGA 1090
||||||||| | ||||| ||| ||| || || ||||||||||| ||||| ||||||||
Sbjct 1097 AGAGTCTCATTACAGATG-GTAAGATTCTTGGCACTTGATGAGGCGGACAGAATGCTGGA 1155
Query 1091 CATGGGTTTTGAGCCACAAATTAGAAAGATTGTTGAACAGATGGACATGCCTCCACGTGG 1150
|||||||||||| |||||||| || ||||| ||| | ||||||||||||||||| | |||
Sbjct 1156 CATGGGTTTTGAACCACAAATCAGGAAGATCGTTCAGCAGATGGACATGCCTCCTCCTGG 1215
Query 1151 GGTGAGACAGACAATGTTGTTCAGTGCTACATTTCCAAGGGAGATCCAGAGACTTGCAGC 1210
|| | ||||||||||||||||||||||||||||| |||||||| |||||||||||| |
Sbjct 1216 TGTCCGGCAGACAATGTTGTTCAGTGCTACATTTCCTAGGGAGATACAGAGACTTGCATC 1275
Query 1211 TGA-TTTCATGTCAAACTATATATTTTTGGCTGTGGGAAGAGTTGGTTCAAGCACTGATT 1269
||| |||| | ||||| || |||||| ||||||| |||||||| |||||||| || ||||
Sbjct 1276 TGATTTTC-TTTCAAATTACATATTTCTGGCTGTTGGAAGAGTGGGTTCAAGTACGGATT 1334
Query 1270 TAATTACCCAAAGGGTTGAGTTTGTCCAAGAGTCTGACAAGAGAAGCCATCTCATGGACC 1329
||||| |||||| || |||||||| || || |||||||| ||||||||||| |||||||
Sbjct 1335 TAATTGTCCAAAGAGTAGAGTTTGTTCATGATTCTGACAAAAGAAGCCATCTAATGGACC 1394
Query 1330 TGCTTCATGCGCAGA--GAG-A--G-ACCCAA-GACAAGCAATCATTGACAT-TGGTTTT 1381
| |||||||| |||| ||| | | | |||| || |||||| | ||||| | | |||||
Sbjct 1395 TTCTTCATGCCCAGAGGGAGAATGGTAACCAAGGA-AAGCAAGCTTTGAC-TCTAGTTTT 1452
Query 1382 TGTGGAGACAAAGAGGGGAGCTGA-TACTTTGGAAAATTGGCTGTGCATGAATGAGTTT- 1439
|||||||||||||| ||||||||| | ||||||| |||||| ||||||| |||| ||||
Sbjct 1453 TGTGGAGACAAAGAAGGGAGCTGACT-CTTTGGAGAATTGGTTGTGCATCAATG-GTTTC 1510
Query 1440 CCAGCAACCTCCATTCATGGCGATAGAACACAACAGGAAAGAGAAGTGGCACTGAGGTCC 1499
|||||||| |||||||||| ||||| |||||||||||||||||||||||||||| ||
Sbjct 1511 CCAGCAACGACCATTCATGGTGATAGGTCACAACAGGAAAGAGAAGTGGCACTGAGATCA 1570
Query 1500 TTCAAAACTGGGAGAACACCTATTTTGGTTGCAACAGACGTGGCAGCACGTGGTCTTGAC 1559
||||| |||||| | |||||||||||||||||||| || |||||||||||||||||||||
Sbjct 1571 TTCAAGACTGGGCGGACACCTATTTTGGTTGCAACCGATGTGGCAGCACGTGGTCTTGAC 1630
Query 1560 ATTCCCCACGTGGCTCATGTTGTAAACTTTGATCTACCAAATGACATCGATGACTATGTC 1619
||||| |||||||||||||| || ||||||||||||||||| ||||| ||||||||||||
Sbjct 1631 ATTCCGCACGTGGCTCATGTAGTGAACTTTGATCTACCAAACGACATTGATGACTATGTC 1690
Query 1620 CACCGTATCGGACGAACAGGACGTGCCGGCAAAT-CGGGAATAGCAACTGCCTTCTTCAA 1678
|||||||||||||||||||||||||| || |||| | ||| |||||||||| ||||||||
Sbjct 1691 CACCGTATCGGACGAACAGGACGTGCAGG-AAATTCAGGACTAGCAACTGCTTTCTTCAA 1749
Query 1679 CGAGAACAATGCA-CAAATGGCTAGGTCGCTTGCTGAGCTGATGCAAGAAGCCAATCAAG 1737
|| ||||| || ||| |||| | | | || |||||||| ||||||||||| || || |
Sbjct 1750 TGACAACAACACAACAA-TGGCCAAGCCACTGGCTGAGCTAATGCAAGAAGCTAACCAGG 1808
Query 1738 AGGTGCCC-GAGTGGCTCACACGATACGCTTCACGTGCTTCATTTGGTGGTGGTAAGAAA 1796
|||| ||| || ||||| || |||||||| || |||||||||||||| |||||||||||
Sbjct 1809 AGGT-CCCTGACTGGCTGACTCGATACGCATCTCGTGCTTCATTTGGAGGTGGTAAGAAC 1867
Query 1797 CGG---TCTGGTGGTCGGTTTGGTGGCCGTGACTTCAGAAGGGAAGGCTCTTACAGTAGA 1853
||| |||||||| ||||||||||| ||||||||||| || ||| || ||| || ||
Sbjct 1868 CGGCGGTCTGGTGGACGGTTTGGTGGTCGTGACTTCAGGAGAGAAT-CTTTTA--GTCGA 1924
Query 1854 GGAGGCGGTGG 1864
|| || |||||
Sbjct 1925 GGCGGTGGTGG 1935
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 114658044780
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5