BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486308
Length=2309
Score E
Sequences producing significant alignments: (Bits) Value
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosp... 3795 0.0
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prot... 1258 0.0
> AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21656504-21660532
FORWARD LENGTH=2341
Length=2341
Score = 3795 bits (2055), Expect = 0.0
Identities = 2249/2337 (96%), Gaps = 35/2337 (1%)
Strand=Plus/Plus
Query 1 TTTTCTCTTTTGCTCATTTCCCAGAAACCTTTGTTTCATTTGCTTCGTGTGCGATCGCGA 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4 TTTTCTCTTTTGCTCATTTCCCAGAAACCTTTGTTTCATTTGCTTCGTGTGCGATCGCGA 63
Query 61 GAACAAGGGAAAATTAGGGTTTATATTCTCAAGCTTTTTCGAACACCATTGATCCTTGAT 120
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct 64 GAACAAGGGAAAATTAGGGTTTATATCCTCAAGCTTTTTCGAACACCATTGATCGTTGAT 123
Query 121 CTAAGATTTTTCTTCTATTCGAGTTTCTTAAGGGGCTTTGATCAAACTCAAAATCGAAGA 180
||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct 124 CTAAGATTTTTCTTCTAGTCGAGTTTCTTAAGGGGCTTTGATCAAACTCAAAATTGAAGA 183
Query 181 CCAAGACGTTGAAGGATTCTGGTAAAGCTAAGCAATTATGAGTTCAAATTCATGGGCTGA 240
|||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 184 CCAATACTTTGAAGGATTCTGGTAAAGCTAAGCAACTATGAGTTCAAATTCATGGGCTGA 243
Query 241 TGTTTCTGAATCAGAGAGGGCACCATC---TGGTGCTTGGGGTTATTCTCGTCCGTCTCG 297
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 244 TGTTTCTGAATCAGAGAGGGCACCATCTGGTGGTGGTTGGGGTTATTCTCGTCCGTCTCG 303
Query 298 AACCAACTATGTTCCTCCACATCTTAGGAGCCGTACACCATCTTCGGAGTTTGTTGCTCC 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 304 AACCAACTATGTTCCTCCACATCTTAGGAGCCGTACACCATCTTCGGAGTTTGTTGCTCC 363
Query 358 TTCACCTGG---TAATGATC------G---TGG-GG-G-----A-----TATGGTGGTCG 393
||||||||| |||||||| | ||| || | | |||||||||||
Sbjct 364 TTCACCTGGTAATAATGATCGTGGGGGATATGGTGGTGCAAATAGTGGTTATGGTGGTCG 423
Query 394 AGGCCAAGGTTATGGTGGTCGAGGTTCTGGCTATGGTGGTAGAGGAGGTGTTGGGGGCGG 453
||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||
Sbjct 424 AGGCCAAGGTTATGGTGGTCGAGGTTCGGGCTATGGTGGTAGAGGAGGTCCTGTGGGCGG 483
Query 454 TTGGAATACCAGAAGTGGAGGTTGGGACCGTAGGGATACTGAAACTAACCCGTTTGGTAA 513
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 484 TTGGAATGCCAGAAGTGGAGGTTGGGACCGTCGGGATACTGAAACTAACCCGTTTGGTAA 543
Query 514 TGATGGAAATGCAGACCCGGTTGTTAACGAGCAGGAAAACACAGTCATTAACTTTGAAGC 573
|||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||
Sbjct 544 TGATGGAAATGCAGACCCGGCTGTTAACGAGCAGGAAAACACTGTCATTAACTTTGAGGC 603
Query 574 CTATGAAGATATTCCCATCGAGACAAGTGGGGATAATGTGCCACCCCCTGTTAATACATT 633
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 604 CTATGAAGATATTCCCATCGAGACAAGTGGGGATAATGTGCCACCTCCTGTTAATACATT 663
Query 634 TGCAGAGATAGACCTCGGAGAAGCTCTGAATCTAAATATCCAGAGGTGCAAATACGTGAA 693
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 664 TGCAGAGATAGACCTCGGAGAAGCTCTCAATCTAAATATCCAGAGGTGCAAATACGTGAA 723
Query 694 GCCAACTCCTGTGCAGCGTAATGCAATTCCCATATTGGCTGCCGGAAGGGATTTGATGGC 753
||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 724 GCCGACCCCTGTGCAGCGTAATGCAATTCCCATATTGGCTGCAGGAAGGGATTTGATGGC 783
Query 754 TTGTGCTCAGACAGGGTCTGGGAAGACAGCTGCCTTTTGTTTTCCGATTATTAGTGGGAT 813
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 784 TTGTGCTCAGACAGGCTCTGGGAAGACAGCTGCCTTTTGTTTTCCGATTATTAGTGGGAT 843
Query 814 TATGAAGGATCAGCATATAGAGAGACCACGCGGAGTTCGGGGAGTCTATCCTCTTGCTGT 873
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 844 TATGAAGGATCAGCATATAGAGAGACCACGTGGAGTTCGGGGAGTCTATCCTCTTGCTGT 903
Query 874 CATTCTCTCACCAACAAGGGAGTTGGCTTGCCAGATACATGATGAAGCCAGAAAGTTCTC 933
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 904 CATTCTCTCACCAACAAGGGAATTGGCTTGCCAGATACATGATGAAGCCAGAAAGTTCTC 963
Query 934 CTATCAAACTGGAGTGAAAGTTGTGGTTGCTTACGGAGGAACACCAGTCAACCAACAGAT 993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 964 CTATCAAACTGGAGTGAAAGTTGTGGTTGCTTACGGAGGAACACCAGTCAACCAACAGAT 1023
Query 994 TAGGGAGCTTGAAAGAGGAGTTGATATTCTTGTTGCAACTCCTGGGAGATTAAATGATTT 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1024 TAGGGAGCTTGAAAGAGGAGTTGATATTCTTGTTGCAACTCCTGGGAGATTAAATGATTT 1083
Query 1054 GCTTGAGAGAGGTAGAGTTTCATTACAGATGGTAAAATTCTTGGCACTTGATGAGGCGGA 1113
|||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct 1084 GCTTGAGAGAGGTAGAGTCTCATTACAGATGGTAAGATTCTTGGCACTTGATGAGGCGGA 1143
Query 1114 CAGAATGCTGGACATGGGTTTTGAACCACAAATCAGGAAGATCGTTCAGCAGATGGACAT 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1144 CAGAATGCTGGACATGGGTTTTGAACCACAAATCAGGAAGATCGTTCAGCAGATGGACAT 1203
Query 1174 GCCTCCTCCTGGTGTCCGGCAGACGATGTTGTTCAGTGCTACATTTCCTAGGGAGATACA 1233
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1204 GCCTCCTCCTGGTGTCCGGCAGACAATGTTGTTCAGTGCTACATTTCCTAGGGAGATACA 1263
Query 1234 GAGACTTGCATCTGATTTTCTTTCAAATTACATATTTCTGGCTGTTGGGAGAGTGGGTTC 1293
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1264 GAGACTTGCATCTGATTTTCTTTCAAATTACATATTTCTGGCTGTTGGAAGAGTGGGTTC 1323
Query 1294 AAGTACGGATTTAATTGTCCAAAGAGTAGAGTTTGTCCATGATTCTGACAAAAGAAGCCA 1353
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1324 AAGTACGGATTTAATTGTCCAAAGAGTAGAGTTTGTTCATGATTCTGACAAAAGAAGCCA 1383
Query 1354 TCTAATGGACCTTCTTCATGCCCAGAGGGAGAACGGTAACCAAGGAAAGCAAGCTTTGAC 1413
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1384 TCTAATGGACCTTCTTCATGCCCAGAGGGAGAATGGTAACCAAGGAAAGCAAGCTTTGAC 1443
Query 1414 TCTAGTTTTTGTGGAGACAAAGAAGGGAGCTGACTCTTTGGAGAATTGGTTGTGCATCAA 1473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1444 TCTAGTTTTTGTGGAGACAAAGAAGGGAGCTGACTCTTTGGAGAATTGGTTGTGCATCAA 1503
Query 1474 TGGTTTCCCAGCAACGACCATTCACGGTGATAGGTCACAACAGGAAAGAGAAGTGGCACT 1533
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1504 TGGTTTCCCAGCAACGACCATTCATGGTGATAGGTCACAACAGGAAAGAGAAGTGGCACT 1563
Query 1534 GAGATCATTCAAGACTGGACGGACACCTATTTTGGTTGCAACCGATGTGGCAGCACGTGG 1593
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1564 GAGATCATTCAAGACTGGGCGGACACCTATTTTGGTTGCAACCGATGTGGCAGCACGTGG 1623
Query 1594 TCTTGACATTCCGCATGTGGCTCATGTAGTGAACTTTGATCTACCAAACGACATTGATGA 1653
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1624 TCTTGACATTCCGCACGTGGCTCATGTAGTGAACTTTGATCTACCAAACGACATTGATGA 1683
Query 1654 CTATGTCCACCGTATCGGACGAACAGGACGTGCAGGCAATTCAGGACTAGCAACTGCTTT 1713
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1684 CTATGTCCACCGTATCGGACGAACAGGACGTGCAGGAAATTCAGGACTAGCAACTGCTTT 1743
Query 1714 CTTCAATGACAACAACACATCAATGGCCAAGCCACTGGCTGAGCTAATGCAAGAAGCAAA 1773
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 1744 CTTCAATGACAACAACACAACAATGGCCAAGCCACTGGCTGAGCTAATGCAAGAAGCTAA 1803
Query 1774 CCAGGAGGTCCCTGACTGGCTGACTCGATACGCATCTCGTGCTTCATTTGGAGGTGGTAA 1833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1804 CCAGGAGGTCCCTGACTGGCTGACTCGATACGCATCTCGTGCTTCATTTGGAGGTGGTAA 1863
Query 1834 GAACCGGCGGTCTGGTGGACGGTTTGGTGGCCGTGACTTCAGGAGAGAATCTTTTAGCCG 1893
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 1864 GAACCGGCGGTCTGGTGGACGGTTTGGTGGTCGTGACTTCAGGAGAGAATCTTTTAGTCG 1923
Query 1894 AGGCggtggtggtgctgactactatggtggtggtggtgggtatggaggcgttcctggtgg 1953
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 1924 AGGCGGTGGTGGTGCTGACTACTATGGTGGAGGTGGTGGATATGGAGGCGTTCCTGGTGG 1983
Query 1954 tggctatggagcaatgcctggtgggtACGGCCCCGTACCAGGTGGTGGATATGGAACTGT 2013
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct 1984 TGGCTATGGAGCAATGCCTGGTGGGTACGGACCCGTACCAGGTGGTGGATATGGAAATGT 2043
Query 2014 TCCTGGTGGTGGCTATGCACCTTATGGTAGAGGTGGTGGTGCTTACTATGGTGGAGGTCC 2073
||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2044 TCCGGGTGGTGGTTATGCACCTTATGGTAGAGGTGGTGGTGCTTACTATGGT------CC 2097
Query 2074 TGGAGGATATGGAACTGTTCCTAGCCAAGGGTATGGTCCTGGAGTGGCTAGTGCGTGGGA 2133
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2098 TGGAGGATATGGAACCGTTCCTAACCAAGGGTATGGTCCTGGAGTGGCTAGTGCGTGGGA 2157
Query 2134 TTAAGCTTTAACTTCAATTCTTCAAGAACCGATTATGTTCTCT--CTCTCACACTTATCT 2191
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 2158 CTAAGCTTTAACTTCAATTCTTCAAGAACCGATTATGTTCTCTTTCTCTCTCACTTATCT 2217
Query 2192 CTATTGTTTATTATTAGGGAGCAGCCACCGATGTGTATGTTTGCTCTTTAAATGGTTATG 2251
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2218 CTATTGTTTATTATTAGGGAGCAGCCACAGATGTGTATGTTTGCTCTTTAAATGGTTATG 2277
Query 2252 TAGTAGACACGAATCGTCTCTTTGTTCACTGTGaaaaaagaaaaaCCCCTAGTCGAC 2308
|||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||
Sbjct 2278 TAGTAGACACGAATCGTCTCTTTGTTCAATGTGAAAAAAGAAAACCCCCTAGTAGAC 2334
> AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21639978-21643795 FORWARD LENGTH=2348
Length=2348
Score = 1258 bits (681), Expect = 0.0
Identities = 1220/1474 (83%), Gaps = 61/1474 (4%)
Strand=Plus/Plus
Query 435 GAGGAGGTGTTGGGGGCGGTTGGAATACCAGAAGTGGAGGTTGGGACCGTAGGGATAC-T 493
|||| |||| ||| || || ||||| | |||||||||||| |||||||||||||| || |
Sbjct 438 GAGGTGGTGGTGGTGGTGGCTGGAACAACAGAAGTGGAGGGTGGGACCGTAGGGA-ACGT 496
Query 494 GAAACT-AACCCGTTTGGTA-ATGATG--GAAATGCAGACCCGGTTGTTAAC-GAGCAGG 548
| || | ||||| ||||| | |||||| | | | ||| |||| | || || |||||||
Sbjct 497 G-AAGTAAACCCATTTGG-AGATGATGCTG-AGT-TAGAACCGG-TCTTTACAGAGCAGG 551
Query 549 AAAACACAGTCATTAACTTTGAAGCCTATGAAGATATTCCCA-TCGAGACAAGT-GGGGA 606
| || || | |||||| ||||| ||||||||||||||| ||| | ||||| ||| |||||
Sbjct 552 AGAATACTGGCATTAATTTTGATGCCTATGAAGATATT-CCAGTTGAGACCAGTGGGGGA 610
Query 607 TAATGTGCCACCC-CCTGTTAATACATTTGCAGAGATAGACCTCGGAGAAGC-TCTGAAT 664
| ||||| ||| |||||||| |||||||| || ||||| || || || || | | |||
Sbjct 611 -GACGTGCC-CCCTCCTGTTAACACATTTGCTGACATAGATCTTGGGGATGCAT-TAAAT 667
Query 665 CTAAATATCCAGAGGTGCAAATACGTGAAGCCAACTCCTGTGCAGCGTAATGCAATTCCC 724
|| || |||| ||||||||| || |||| |||||| || || |||||| |||| |||||
Sbjct 668 CTGAACATCCGGAGGTGCAAGTATGTGAGGCCAACACCGGTACAGCGTCATGCTATTCCA 727
Query 725 ATATTGGC-TGCCGGA-AGGGATTTGATGGCTTGTGCTCAGACAGGGTCTGGGAAGACAG 782
||| | || || | || || ||||||||||| ||||| ||||| |||||||||||||| |
Sbjct 728 ATACT-GCTTG-CAGAGAGAGATTTGATGGCCTGTGCCCAGACTGGGTCTGGGAAGACTG 785
Query 783 CTGCCTTTTGTTTTCCGATTATTAGTGGGATTATGAAGGATCAGCATATAGAGAGACCAC 842
|||| ||||| ||||| || |||||||| || ||||| ||||||||| |||| ||||| |
Sbjct 786 CTGCTTTTTGCTTTCCAATAATTAGTGGAATCATGAAAGATCAGCATGTAGAAAGACC-C 844
Query 843 GCG-GAGTT--CGGG-GAGTCTATCCTCTTGCTGTCATTCTCTCACCAACAAGGGAGTTG 898
|| | ||| |||| | || || ||| |||| ||||| ||||||||||||||||| |||
Sbjct 845 -CGTG-GTTCACGGGCG-GTTTACCCTTTTGCAGTCATCCTCTCACCAACAAGGGAATTG 901
Query 899 GCTTGCCAGATACATGATGAAGCCAGAAAGTTCTCCTATCAAACTGGAGTGAAAGTTGTG 958
|| |||||||||||||||||||||| ||| |||||||| |||||||| ||||| |||||
Sbjct 902 GCATGCCAGATACATGATGAAGCCAAAAAATTCTCCTACCAAACTGGTGTGAAGGTTGTT 961
Query 959 GTTGCTTACGGAGGAACA-CCAGTCAACCAACAGATTAGGGAGCTTGAAAGAGGAGT-TG 1016
|||||||| ||||||||| ||| || |||| ||| | ||||| || || || ||| | ||
Sbjct 962 GTTGCTTATGGAGGAACACCCATTC-ACCAGCAGCTCAGGGAACTCGAGAGGGGA-TGTG 1019
Query 1017 ATATTCTTGTTGCAACTCCTGGGAGATTAAATGATTTGCTTGAGAGAGGTAGAGTTTCAT 1076
|||| ||||| ||||||||||| | ||||||||||||||||| |||| |||||| |||
Sbjct 1020 ATATCCTTGTGGCAACTCCTGGCCGGTTAAATGATTTGCTTGAAAGAGCTAGAGTCTCAA 1079
Query 1077 TACAGATGGTAAAATTCTTGGCACTTGATGAGGCGGACAGAATGCTGGACATGGGTTTTG 1136
| |||||| | | || || || || |||||||| ||||| |||||||||||||||||||
Sbjct 1080 TGCAGATGATTAGGTTTTTAGCTCTAGATGAGGCAGACAGGATGCTGGACATGGGTTTTG 1139
Query 1137 AACCACAAATCAGGAAGATCGTTCAGCAGATGGACATGCCTCCTCCTGGTGTCCGGCAGA 1196
| ||||| || || ||||| ||| ||||||||||||||||||| | ||| || | ||||
Sbjct 1140 AGCCACAGATTAGAAAGATTGTTGAGCAGATGGACATGCCTCCACGTGGGGTGAGACAGA 1199
Query 1197 CGATGTTGTTCAGTGCTACATTTCCTAGGGAGATACAGAGACTTGCATCTGATTTTC-TT 1255
| ||| ||||||||||||||||||| || |||| |||||||||||| |||| |||| |
Sbjct 1200 CAATGCTGTTCAGTGCTACATTTCCAAGTCAGATTCAGAGACTTGCAGCTGA-TTTCATG 1258
Query 1256 TCAAATTACATATTTCTGGCTGTTGGG-AGAGTGGGTTCAAGTACGGATTTAATTGTCCA 1314
||||| || |||||| |||||| |||| ||||| |||||||| || ||||||||| |||
Sbjct 1259 TCAAACTATATATTTTTGGCTG-TGGGAAGAGTTGGTTCAAGCACTGATTTAATTACCCA 1317
Query 1315 AAGAGTAGAGTTTGTCCATGATTCTGACAAAAGAAGCCATCTAATGGACCTTCTTCATGC 1374
||| || ||||||||||| || |||||||| ||||||||||| |||||||| ||||| ||
Sbjct 1318 AAGGGTTGAGTTTGTCCAAGAGTCTGACAAGAGAAGCCATCTCATGGACCTGCTTCACGC 1377
Query 1375 CCAGAGGGAGAACGGTAACCAAGGA-AAGCAAGCTTTGAC-TCTAGTTTTTGTGGAGACA 1432
|| | ||| | | | |||| || |||||| | ||||| | |||||||||||||||||
Sbjct 1378 GCA-A-AGAG-A--G-ACCCAA-GACAAGCAATCATTGACAT-TAGTTTTTGTGGAGACA 1429
Query 1433 AAGAAGGGAGCTGACT-CTTTGGAGAATTGGTTGTGCATCAATG-GTTTCCCAGCAACGA 1490
|||| ||||||||| | ||||||| |||||| ||||||| |||| |||| ||||||||
Sbjct 1430 AAGAGGGGAGCTGA-TACTTTGGAAAATTGGCTGTGCATGAATGAGTTT-CCAGCAACCT 1487
Query 1491 CCATTCACGGTGATAGGTCACAACAGGAAAGAGAAGTGGCACTGAGATCATTCAAGACT- 1549
||||||| || ||||| |||||||||||||||||||||||||||| || ||||| |||
Sbjct 1488 CCATTCATGGCGATAGAACACAACAGGAAAGAGAAGTGGCACTGAGGTCCTTCAAAACTG 1547
Query 1550 GGACGGACACCTATTTTGGTTGCAACCGATGTGGCAGCACGTGGTCTTGACATTCCGCAT 1609
||| |||||||||||||||||||||| || |||||||||||||||||||||||||| ||
Sbjct 1548 GGA-GGACACCTATTTTGGTTGCAACAGACGTGGCAGCACGTGGTCTTGACATTCCCCAC 1606
Query 1610 GTGGCTCATGTAGTGAACTTTGATCTACCAAACGACATTGATGACTATGTCCACCGTATC 1669
||||||||||| || ||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 1607 GTGGCTCATGTTGTAAACTTCGATCTACCAAATGACATTGATGACTATGTCCACCGTATC 1666
Query 1670 GGACGAACAGGACGTGCAGGCAATTCAGGACTAGCAACTGCTTTCTTCAATGACAACAAC 1729
||||||||||||||||||||||| || ||| |||||||||| |||||||| || |||||
Sbjct 1667 GGACGAACAGGACGTGCAGGCAAATCTGGAATAGCAACTGCCTTCTTCAACGAGAACAAT 1726
Query 1730 ACATCAA-TGGCCAAGCCACTGGCTGAGCTAATGCAAGAAGCAAACCAGGAGGTCCCTGA 1788
|| ||| |||| | | | || |||||||||||||||||||| || || |||||||| ||
Sbjct 1727 GCA-CAACTGGCTAGGTCGCTTGCTGAGCTAATGCAAGAAGCCAATCAAGAGGTCCCCGA 1785
Query 1789 CTGGCTGACTCGATACGCATCTCGTGCTTCATTTGGAGGTGGTAAGAACCGGCGGTCTGG 1848
||||| || ||||| || || |||||||||||||| ||||||||||| ||| |||||
Sbjct 1786 GTGGCTCACACGATATGCTTCACGTGCTTCATTTGGTGGTGGTAAGAAACGG---TCTGG 1842
Query 1849 TGGACGGTTTGGTGGCCGTGACTTCAGGAGAGAA 1882
||| ||||||||||||||||||||||| || |||
Sbjct 1843 TGGTCGGTTTGGTGGCCGTGACTTCAGAAGGGAA 1876
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 114607844235
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5