BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg486331 Length=2568 Score E Sequences producing significant alignments: (Bits) Value AT3G58770.1 | Symbols: | unknown protein; Has 38 Blast hits to... 3345 0.0 > AT3G58770.1 | Symbols: | unknown protein; Has 38 Blast hits to 36 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 32; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | chr3:21732258-21735327 FORWARD LENGTH=2722 Length=2722 Score = 3345 bits (1811), Expect = 0.0 Identities = 2355/2603 (90%), Gaps = 96/2603 (4%) Strand=Plus/Plus Query 24 AAACTCTTGAAACCtttttttCTCATCTCTGTCTATCTTA-ACTTTCTCTTTCATCTCCT 82 ||||||||||||||| ||||||||||||| |||||| || ||||| ||||||||||||| Sbjct 158 AAACTCTTGAAACCTCTTTTTCTCATCTC--TCTATC-TACACTTTATCTTTCATCTCCT 214 Query 83 TCATCGTTCTCTTGTCAAGAAATCGATTATTCCTCTTAGACTTTGTATGAACCATGGAGG 142 ||||||||||||| |||||| |||| |||||| | | ||||||| ||| ||||||||| Sbjct 215 TCATCGTTCTCTTCTCAAGATATCG---ATTCCT-TCA-ACTTTGTCTGATCCATGGAGG 269 Query 143 TTGATTACGGTGGATTTTCTATCAGAGAGTACACGAAGAAGGTAAGGAGTGA-AAGCGTG 201 ||||||||||||||||||||||||||||||||||| |||||||||||||||| || | Sbjct 270 TTGATTACGGTGGATTTTCTATCAGAGAGTACACGGAGAAGGTAAGGAGTGATAA-TGAA 328 Query 202 CGGAAATGCTGGCCGTTCGCCGGAGATCTTATTCAGTCGTTTCTTCCTCCGATTACTGTC 261 || ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct 329 CGAAAATGCTGGCCGTTCGCCGGAGATCTTATTCAGTCTTTTCTTCCTCCCATTACTGTC 388 Query 262 TCCAAGTTCCGGTGGTGGTCGCATGAGCTAGCTTCTCTGCTTACGAAATCTCCGGTCTCT 321 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 389 TCCAAGTTCCGGTGGTGGTCGCATGAGCTTGCTTCTCTGCTTACGAAATCTCCGGTCTCT 448 Query 322 G-T--TGA---TGAT---T-C--TCATC---AGGCCAAAGCAAAGTCTAAACCGTGTAAA 366 | | ||| |||| | | || || |||||||||||||| ||| || ||||||| Sbjct 449 GTTGATGATTCTGATCCGTCCTTTCGTCGGAAGGCCAAAGCAAAGACTAGACAGTGTAAA 508 Query 367 AAGCGTTCCATCATCGAAATTTGTGCGACGGCACCGAAAATCCAGTTTGCAGAAGATCAT 426 ||||| |||||| ||||||||||||||||||| ||||| |||||||| ||||||||| || Sbjct 509 AAGCGCTCCATCGTCGAAATTTGTGCGACGGCGCCGAAGATCCAGTTAGCAGAAGATTAT 568 Query 427 GTGGTGCAC---AAGAAGATCAAAACCACGAAATCCAAAGATTCCGGTCG-TCGGGAATT 482 ||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 569 GTGGTGCACAAGAAGAAGATCAAAACCACGAAATCCAAAGATTCCGGT-GATCGGGAATT 627 Query 483 TGCTAACAAGGTTAATCAATTCAAAGAACAAGCTCAACAAAAAGTGGATCATGTTGGAAT 542 ||||||||||||| | ||| | | ||| |||||||||||||| || |||||| Sbjct 628 CACTAACAAGGTTAA-C----CAATGCA-AAG---AACAAAAAGTGGATGATATTGGAAA 678 Query 543 ATGCAGTCTTGGGATTAAAGAAAGCTCTGGTGTTATGTCTCTTAGTAGCAACAAGGCTGG 602 |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 679 ATGCAGTCTTGGAATTAAAGAAAGCTCTGGTGTTATGTCTCTTAGTAGCAAGAAGGCTGG 738 Query 603 ATTATTCAGTAAAGAGCATGATTCTGAGTTTCAGATTCCTGCAATTTTTAAAGCAAAACG 662 |||| |||||||||| |||||||||||||||||||||||||||||||| || |||||||| Sbjct 739 ATTAGTCAGTAAAGATCATGATTCTGAGTTTCAGATTCCTGCAATTTTCAAGGCAAAACG 798 Query 663 AAAAGTTTGCTTTGTTAGGAGTCCTGATAAGTCAAAAACTCATGTGAGTTTCTCTGATCA 722 ||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct 799 GAAAGTATGCTTTGCGAGGAGTCCTGATAAGTCAAAAACTCATGTGAGGTTCTCTGATCA 858 Query 723 CACTGGAAATCTTTCTCAGCTGGAGAAAAGTACTGTCTCTTTAGAACTCTGCTGTTTGGA 782 | ||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||| Sbjct 859 AAGTGGGAATCTTTCTCAGCTGGAGAAAAGTACCGTCTCTTTACAACTCTGCTGTTTGGA 918 Query 783 AATGAATAGGTTGAGTCTCTCTGGAAATCTTTCTCGGAGGAAGGATCCGTCATCTGTAAA 842 ||||||||||||||||||||||| ||||||||||| ||||||| ||| |||||||||||| Sbjct 919 AATGAATAGGTTGAGTCTCTCTGAAAATCTTTCTCAGAGGAAGAATCAGTCATCTGTAAA 978 Query 843 TGACAAGCAAGTGAAGGTTATGTCGACTGATCAGACTAGTACAGTTATGCATTTCGAAAC 902 |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 979 TGACAAGCAACTGAAGGTTATGTCGACTGATCAGACTAGTACAGTTATGCATTTGGAAAC 1038 Query 903 AAGGCAACAATACAAATTTCAGCCTGCGGTTTCAAAATCTGACTTGTCTTGTTTCCTTGG 962 ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1039 AAGGCAACAATACAAGTTTCAGCCTGCGGTTTCAAAATCTCACTTGTCTTGTTTCCTTGG 1098 Query 963 ACCACATCTTAGTTCACAGGAAAGAGTAAATGATGCATTGGATTTGGAGAGAAAGGAACA 1022 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct 1099 ACCACATCTTAGTTCACAGGAAAGAGTAACGGATGCATTGGATTTGGAGAGAAAGGAATA 1158 Query 1023 TGTGGCTCAACCTATTCAATCGTTTATCTCTACTTCGAGTGAGAGTCCGTACAGAGCTTG 1082 |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1159 TGTGGCTCAAGCTATTCAATCGTTTATCTCTACTTCGAGTGAGACTCCGTACAGAGCTTG 1218 Query 1083 TCCTTCTTTTTCTCAACCTGTGTCAGCTGATATGCACCGAGGGGCATTGCTGTACCAATC 1142 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct 1219 TCCTTCTTTTTCTCAACCTGTGTCAGCTGATATGCACCGCGGGACATTGCTGTACCAATC 1278 Query 1143 ACCTTTTGATCCACTTCTTGTCGAATGGATGCAAAAATCAGCTTTATATAGACAAAGGCA 1202 ||||||||||||||||| | |||||||||||||||||||| |||| ||||||||||||| Sbjct 1279 ACCTTTTGATCCACTTCCTACCGAATGGATGCAAAAATCAGTTTTAAATAGACAAAGGCA 1338 Query 1203 CGTGGGAGAAGCGATCCTAGGGTTCCCTCTAAATTTAGAGGGTGACCTTGTTGATGCAAA 1262 |||||||| |||||| |||||||||||||| || || |||||||||| |||||||| || Sbjct 1339 TGTGGGAGAGGCGATCTTAGGGTTCCCTCTAGATCTACAGGGTGACCTAGTTGATGCGAA 1398 Query 1263 TGGAGAGGCTAATAGAAGTTTTGATCGGTCAGGTTTATGTACTAGTTCCTCTAAATCTGC 1322 ||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1399 TGGAGAGACTTGTAGAAGTTTTGATCGGTCAGGTTTATGTACTAGTTTCTCTAAATCTGC 1458 Query 1323 ATCTGCAGGGAATGATCTTTTACTTGGAAATTTAGTGGACTTTTCCAGTGAAAAGAAGCA 1382 |||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1459 ATCTACAGGTAATGATCTTTTACTTGGAAATTTAGTGGAATTTTCCAGTGAAAAGAAGCA 1518 Query 1383 TTCAACTGAGCCAGCACTTGCCAAAGACAGTGCACCGCGTAATGAGAAACGCCACAAGTA 1442 || || |||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct 1519 TTTAATTGAGGCAGCACTTGCCAAAGACAATGCACCGCTTAATGAGAAACGCCACAAGTA 1578 Query 1443 CTTTCCTGCTAGGTTAGGCCTTGATGAGACCTTTACAGAGAAAGCATATTTCACAAACAC 1502 ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 1579 CTTTCCTGCTAGGTTAGGCCTTGATGAGACCTTCACAGAGAAAGCATATTTAACAAACAC 1638 Query 1503 TAATGATGGAGAGTGCGGCTACACTTTACATTCATCGGTTTCTGAAGTCAATCCAAGGAG 1562 |||||||||||||||||||||||| || | |||||||||||||||||| ||||| Sbjct 1639 TAATGATGGAGAGTGCGGCTACAC---AC---C---GGTTTCTGAAGTCAATCCGAGGAG 1689 Query 1563 CCACACAATCAATATGTCAAAACAG-AGTTGTGTCAAACAGAACCTAAATAGTGGAAAGG 1621 |||| |||||||||||||||| | | | | |||||||||||||||||||||| ||||||| Sbjct 1690 CCACGCAATCAATATGTCAAAGC-GTAATGGTGTCAAACAGAACCTAAATAGCGGAAAGG 1748 Query 1622 TGATTTCAAAGCGTGATGATTTGTGTTTACAAAACACTCAAGCAACAATGCGGCTGATGG 1681 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1749 TGATTTTAAAGCGTGATGATTTGTGTTTACAAAACACTCAAGCAACAATGCGGCTGATGG 1808 Query 1682 GTCAGGATGTTTCTGTCAGCACAAGA-ACG--GGC--GAT-AG---G--T-------TCT 1723 || |||||||||||||||||||||| || || ||| || | | || Sbjct 1809 GTAAGGATGTTTCTGTCAGCACAAGTTACTCAGGTATGATTAGAACGGGTGAGAGGATCA 1868 Query 1724 TAGCACCGGATGCTTCTATAGATTATTCCTCTCTGGGGAGCC-ATACTCACCAGAGCTGG 1782 ||| ||||||||||||||||||||||||||||||||||| || ||||||| || |||||| Sbjct 1869 TAGGACCGGATGCTTCTATAGATTATTCCTCTCTGGGGA-CCTATACTCATCAAAGCTGG 1927 Query 1783 CTATGTCAAAGGACAACACTTGAAGTTTCA-ATGAGTCCTTCAACCACAACATTGGATAA 1841 |||||||||||||||| |||||||||||| | || || ||||||||||| ||||||||| Sbjct 1928 GTATGTCAAAGGACAACTCTTGAAGTTTCAGA-GAATCATTCAACCACAATATTGGATAA 1986 Query 1842 GAATTGGAACAGAGCTTTGCTACGTGATACTTCAAAGGATCCCTTTTCTTTGTTTTGTGA 1901 ||||||||||| |||| ||||||||||||||||||| ||||||||| ||||||||||||| Sbjct 1987 GAATTGGAACAAAGCTCTGCTACGTGATACTTCAAAAGATCCCTTTCCTTTGTTTTGTGA 2046 Query 1902 ACCACATGTCAGCTTGGCTTCTCAATCCAGAGCATATG-TAATTCCTGATTCA-A-T--C 1956 ||||| |||||||||||||||||||||||||||||||| | ||||||||||| | | | Sbjct 2047 ACCACTTGTCAGCTTGGCTTCTCAATCCAGAGCATATGCTG-TTCCTGATTCAGAATTTC 2105 Query 1957 CT-----------GAATCCATGTTGCTCGCTCGTGTCTCTTCCATTGTCTGATAAGGATC 2005 || |||||||||||||||||||| |||| |||| |||||||| ||| ||| Sbjct 2106 CTTCCACAATCCTGAATCCATGTTGCTCGCTCGCGTCTTTTCCTTTGTCTGAGAAGAATC 2165 Query 2006 TCAACTTCCATGGATCTGGTTTAGGGCTACCAAACAGTTTCACATTCAGCCAGCAACAAC 2065 ||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct 2166 TCAACTTCCATGGGTCTGGTTTAGGGCCACCAAACAGTTTCACACTCAGCCAGCAACAAC 2225 Query 2066 TACCTTTTCCATCTAATTACAACAATGTTGATATTGGTCTCCTACCTGATGCTAGAAAAC 2125 |||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 2226 TACCTTTTCCATATGATTATAACAATGTTGATATTGGTCTCCTACCTGATGCTAGAAAAC 2285 Query 2126 CATCTTTCGGATTGCCTTTCTCGTGCGTAGATTCTACTAGACGGTCACAGGCTCCTTGGC 2185 |||||||||||||||||| ||| | | ||||| |||||||||||||| |||||||| Sbjct 2286 GATCTTTCGGATTGCCTTTATCGAGTACAAATTCTGCTAGACGGTCACAGACTCCTTGGG 2345 Query 2186 CTCAAAGTTCATTTGAGAACTCTTGTTCTGAATTGTCTTTCATCAACCCCAGCGAGCAAC 2245 |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 2346 CTCAAAGTTCATCTGAGAACTCTTGTTCTGAATTGTCTTTCGTCAACCCCAGCGAGCAAC 2405 Query 2246 TAACGTCCTTCTATGGGTCAAGTTTATCTTCGTCCATAATAAACGTTGGAACTACAAATA 2305 |||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||| Sbjct 2406 TAACGTCCTTCTATGGGTCAAGGTTATCTTCGTCCATAA-A--CGTTGGAACTACAAATA 2462 Query 2306 AGCGGGTAGCACCCGTAGAGGAGTATCCAATGAAGAACCATAAAATCCCCAAGTTGCTGC 2365 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 2463 AGCGGGTAGCACCCGTAGAGGAGTATCCAATGAAGAACCATAAAGTCCCCAAGTTGCTGC 2522 Query 2366 CAATGCAAGGTGGCATGAATTATGTTAAAGAGTTTCTTTGCAGGCCAGCAAATTAAGGAA 2425 |||||||||||||| | |||||||||||||| ||||||||||||||||||||||| |||| Sbjct 2523 CAATGCAAGGTGGCTTAAATTATGTTAAAGAATTTCTTTGCAGGCCAGCAAATTA-GGAA 2581 Query 2426 ATCAATAAATCTAGGAGTCTAAGGGTATATAACCTTGTAATTGTTTGAACCATCCCTTGT 2485 |||| ||| |||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct 2582 ATCACTAA-TCTAGGAGTCTAAGGGTATATAGCCTTGTA-TTGTTTGAACCATCCCTTGT 2639 Query 2486 GTGTTTTATGAATTATTTGGTGATAATGCCTTACTTGGAATGAATTGTTGTGCATGATTG 2545 |||||||||||||||||||||| || ||||||||| ||||||||||||||| |||||||| Sbjct 2640 GTGTTTTATGAATTATTTGGTGTTAGTGCCTTACTCGGAATGAATTGTTGTACATGATTG 2699 Query 2546 CCTTGTTTAGGTAGTACAACACC 2568 ||||||||| || |||||||||| Sbjct 2700 CCTTGTTTAAGTCGTACAACACC 2722 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 127474202163 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5