BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486367
Length=1997
Score E
Sequences producing significant alignments: (Bits) Value
AT3G59052.1 | Symbols: CPuORF18 | conserved peptide upstream op... 2953 0.0
AT3G59050.1 | Symbols: ATPAO3, PAO3 | polyamine oxidase 3 | chr... 2953 0.0
AT2G43018.1 | Symbols: CPuORF17 | conserved peptide upstream op... 1310 0.0
AT2G43020.1 | Symbols: ATPAO2, PAO2 | polyamine oxidase 2 | chr... 1310 0.0
> AT3G59052.1 | Symbols: CPuORF18 | conserved peptide upstream
open reading frame 18 | chr3:21824696-21827509 REVERSE LENGTH=2039
Length=2039
Score = 2953 bits (1599), Expect = 0.0
Identities = 1871/1998 (94%), Gaps = 36/1998 (2%)
Strand=Plus/Plus
Query 29 CTCTTTGATTTTGCTTCAGATTACGCATTCGAATCTGATCTTCGTTGATCTCTGTGGAAG 88
||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 47 CTCATTG-TTTTGCTTCAAATTACGCATTCGAATCTGATCTTCGTTGATCTCTGTGGAAG 105
Query 89 AAACTGATAAGAGAAAATCGCATGAAtttttttGGAAAACTAGGTTTTAATTCATCGATT 148
|||| |||||||||||||||||||||||||||| ||||||||||||||||| | ||||||
Sbjct 106 AAACAGATAAGAGAAAATCGCATGAATTTTTTTAGAAAACTAGGTTTTAATCCTTCGATT 165
Query 149 TCAAGCTACTTCACTAATACGTGTCTTCTGATTTCAATTCTTAGTTTTTCTCCTCAATTG 208
|||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct 166 GCAAGCTACTTCACTAATACGAGTCTTCTGATCTCAATTCTTAGTTTTTCTCCTCAATTG 225
Query 209 CCGATTTCGCTCTTTCTTTTTGAGCAGAAATCGTTAGATCCTTTATCGCTGAATAATACT 268
|||||||| ||||||||||| |||||||||||||||||||||||||||||| | || |
Sbjct 226 CCGATTTCTCTCTTTCTTTTCGAGCAGAAATCGTTAGATCCTTTATCGCTG--T-GTAAT 282
Query 269 AGTAATACTAATTTTAATAATCCCGTGAGTAATTAGTCTGATCATTGTTGAATCATGGAG 328
|||| ||||||||||||||||| | ||||||||| || | |||||||||||||||||||
Sbjct 283 AGTAGTACTAATTTTAATAATCTTGAGAGTAATTACTCCGTTCATTGTTGAATCATGGAG 342
Query 329 TCCGGAGGCAAAACTAATCGTCAGCTGCGTAAAGCTATTTGTGTCTCAGCCGACGAGAAG 388
||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||
Sbjct 343 TCCGGAGGCAAAACTAATCGTCAGCTGCGTAAAGCTATTTGCGTCTCAACAGACGAGAAG 402
Query 389 ATGAAGAAGAAGAGATCACCTTCAGTGATAGTGATTGGAGGTGGTATGGCTGGAATTTCA 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 403 ATGAAGAAGAAGAGATCACCTTCAGTGATAGTGATTGGAGGTGGTATGGCTGGAATTTCA 462
Query 449 GCTGCTCGCACTCTTCAAGATGCTTCCTTTCAGGTTGTGGTGTTGGAGTCTCGTGATAGA 508
|| |||||||||||||| |||||||||||||||||||| || |||||||||||||| |||
Sbjct 463 GCCGCTCGCACTCTTCAGGATGCTTCCTTTCAGGTTGTTGTATTGGAGTCTCGTGACAGA 522
Query 509 ATTGGTGGACGAGTTCACACTGATTACTCATTCGGTTTTCCAGTTGATCTGGGTGCATCT 568
|||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 523 ATTGGTGGACGAGTTCACACTGATTACTCATTTGGTTTTCCAGTTGATCTCGGTGCATCT 582
Query 569 TGGTTGCATGGTGTCTGTAAAGAGAATCCTCTGGCTGCAGTAATTGGGAGATTAGGATTA 628
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct 583 TGGTTGCATGGTGTCTGTAAAGAGAATCCTTTGGCTGCAGTAATTGGTAGATTAGGATTA 642
Query 629 CCCCTTTATCGTACTAGTGGTGACAATTCGGTTTTGTATGATCACGATCTTGAGAGCTAT 688
|| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 643 CCTCTTTATCGTACTAGCGGTGACAATTCGGTTTTGTATGATCACGATCTTGAGAGTTAT 702
Query 689 GCTCTATTCGACAAGGCTGGCAACCAAGTTCCTCAAGAGTTGGTAACAAAAGTTGGCGAA 748
||||| |||||||||||||| ||||||||| ||||||||||||| |||||||||||||||
Sbjct 703 GCTCTGTTCGACAAGGCTGGTAACCAAGTTTCTCAAGAGTTGGTGACAAAAGTTGGCGAA 762
Query 749 AATTTTGAGCACATTCTGGAAGAGATCTCTAAAGTCAGGGATGAGCAGGACGAAGACATG 808
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 763 AATTTTGAGCACATTCTGGAAGAGATCTGTAAAGTCAGGGATGAGCAGGACGAAGACATG 822
Query 809 TCAATAGCTCAAGCCTTTTCTATTGTATTCAAGAGGAACCCTGAATTGAGGTTGGAGGGG 868
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 823 TCAATAGCTCAAGCCTTTTCTATTGTATTTAAGAGGAACCCTGAATTGAGGTTGGAGGGA 882
Query 869 CTTGCTCATAATGTGCTTCAGTGGTACTTGTGCCGCATGGAAGGATGGTTTGCTGCTGAT 928
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 883 CTTGCCCATAATGTGCTTCAGTGGTACTTGTGCCGCATGGAAGGATGGTTTGCTGCTGAT 942
Query 929 GCTGAAACCATCTCGGCAAAGTGTTGGGACCAGGAAGAACTATTGCCTGGTGGACATGGT 988
||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||
Sbjct 943 GCTGAAACCATCTCGGCAAAGTGTTGGGATCAGGAAGAACTGTTGCCCGGTGGACATGGT 1002
Query 989 CTTATGGTTAGAGGGTATCGCCCTGTAATCAACACTCTCTCGAAAGGTCTTGATATACGA 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1003 CTTATGGTTAGAGGGTATCGCCCTGTAATCAACACTCTCTCGAAAGGTCTTGATATACGA 1062
Query 1049 CTAAGCCACAGGGTTACCAAGATTGT-AAGGCGCTACAGTGGAGTGAAGGTGACTACAGA 1107
||||| ||||| ||||||||||| | ||||||||||||||| |||||||||||||||||
Sbjct 1063 CTAAGTCACAGAATTACCAAGATT-TCAAGGCGCTACAGTGGTGTGAAGGTGACTACAGA 1121
Query 1108 GAAAGGAGACACGTTTGTTGCGGATGCTGCAGTCATTGCTCTTCCTCTTGGAGTTC-TAA 1166
|||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||
Sbjct 1122 GAAAGGAGACACGTTTGTTGCGGATGCTGCAGTCATTGCTCTTCCTCTAGGAG-TCTTAA 1180
Query 1167 AGTCAGGAATGATAACATTCGAACCAAAGCTTCCACAGTGGAAACAGGAAGCTATCAACG 1226
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1181 AGTCAGGAATGATAACATTCGAACCAAAGCTTCCACAGTGGAAACAAGAAGCTATCAACG 1240
Query 1227 ATCTCGGTGTAGGAATCGAGAACAAGATCATACTGCACTTTGACAATGTCTTTTGGCCAA 1286
|||||||||| ||||||||||||||||||||| || | |||||||| |||||||||||||
Sbjct 1241 ATCTCGGTGTTGGAATCGAGAACAAGATCATATTGAATTTTGACAACGTCTTTTGGCCAA 1300
Query 1287 ACGTAGAGTTTCTAGGAGTGGTTGCAGAAACTTCCTACGGATGCAGTTATTTCTTGAACC 1346
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1301 ACGTAGAGTTTTTAGGAGTCGTTGCAGAAACTTCCTACGGATGCAGTTATTTCTTGAACC 1360
Query 1347 TGCATAAAGCCACAAGCCATCCCGTTCTTGTTTACATGCCGGCTGGTCAGCTCGCTAGAG 1406
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 1361 TGCATAAAGCCACAAGCCATCCTGTCCTTGTTTACATGCCGGCTGGTCAGCTCGCTAGAG 1420
Query 1407 ACATAGAGAAAAAGTCTGATGAATCAGCTGCAAATTTTGCCTTTTCGCAACTCCAGAAAA 1466
|||| ||||||||||| |||||| |||||||||||||||||||||||||||| |||||||
Sbjct 1421 ACATCGAGAAAAAGTCCGATGAAGCAGCTGCAAATTTTGCCTTTTCGCAACTACAGAAAA 1480
Query 1467 TTCTTCCAGATGCATCTTCACCGATAAATTATTTGGTATCAAGGTGGGGATCAGACATCA 1526
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TTCTTCCAGATGCCTCTTCACCGATAAATTATTTGGTATCAAGGTGGGGATCAGACATCA 1540
Query 1527 ATTCATTGGGATCATATAGCTATGACATTGTGAACAAACCTCACGACCTCTATGAGAGAC 1586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1541 ATTCATTGGGATCATATAGCTATGACATTGTGAACAAACCTCACGACCTCTATGAGAGAC 1600
Query 1587 TGAGAGTGCCATTGGATAATCTATTCTTTGCGGGGGAAGCCACTAGCTCGAGCTACCCGG 1646
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1601 TGAGAGTGCCATTGGATAATCTATTCTTTGCGGGGGAAGCCACTAGCTCAAGCTACCCGG 1660
Query 1647 GGTCAGTGCACGGTGCTTATTCAACCGGAGTGCTGGCAGCTGAAGACTGCAGGATGCGTG 1706
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1661 GATCAGTGCACGGTGCTTATTCAACCGGAGTGCTGGCAGCTGAAGACTGCAGGATGCGTG 1720
Query 1707 TGCTTGAGCGCTATGGAGAGCTTGAACATGAGATGGAAGAGGAAGCTCCTGCTTCTGTCC 1766
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1721 TGCTTGAGCGCTATGGAGAGCTCGAACATGAGATGGAAGAGGAAGCTCCTGCTTCTGTCC 1780
Query 1767 CTCTTTTGATCTCCCGTATGTAGTTTGAACCTCAGGT-TGTTAGATT---TG-ATTTG-- 1819
||||| |||||||||||||||| ||| |||||||||| | ||| || | || ||
Sbjct 1781 CTCTTCTGATCTCCCGTATGTAATTTAAACCTCAGGTGTTTTATATCACCTCCATATGGG 1840
Query 1820 A-CTATT-T-A--T--GATTTCAT-A--T--CACTAGTTGGAACTCT----CA-ATGCCA 1862
| | ||| | | | ||||| || | | |||||||||||||||| | || | |
Sbjct 1841 AAC-ATTGTTAGATTTGATTTTATGAGATTTCACTAGTTGGAACTCTTGTGCCTATTCAA 1899
Query 1863 --C-ACTCTGATTTCCTTCAAATCTGATTCAGATCTTTAGTCGAAGTCAAATGTGCAATG 1919
| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1900 TACCACTCTTTTTTCCTTCAAATCTGATTCAGATCTTTAGTCGAAGTCAAATGTGCAATG 1959
Query 1920 TGGAGTATGTAATCCATCTGATCCGAGAACTATGTTTAAGTATTAATGCCAAACGCAAAC 1979
|||||||||||||||||||||| |||||||||||||||||| | ||||||| ||||||
Sbjct 1960 TGGAGTATGTAATCCATCTGATATAAGAACTATGTTTAAGTATCAGTGCCAAATGCAAAC 2019
Query 1980 TTCAAATAAAGATTTCTT 1997
||||||| ||| ||||||
Sbjct 2020 TTCAAATGAAGCTTTCTT 2037
Score = 76.8 bits (41), Expect = 7e-13
Identities = 41/41 (100%), Gaps = 0/41 (0%)
Strand=Plus/Plus
Query 1 CGACTCCTGAGCCTCTCTCTTTCTATCGCTCTTTGATTTTG 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct 3 CGACTCCTGAGCCTCTCTCTTTCTATCGCTCTTTGATTTTG 43
> AT3G59050.1 | Symbols: ATPAO3, PAO3 | polyamine oxidase 3 | chr3:21824696-21827509
REVERSE LENGTH=2039
Length=2039
Score = 2953 bits (1599), Expect = 0.0
Identities = 1871/1998 (94%), Gaps = 36/1998 (2%)
Strand=Plus/Plus
Query 29 CTCTTTGATTTTGCTTCAGATTACGCATTCGAATCTGATCTTCGTTGATCTCTGTGGAAG 88
||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 47 CTCATTG-TTTTGCTTCAAATTACGCATTCGAATCTGATCTTCGTTGATCTCTGTGGAAG 105
Query 89 AAACTGATAAGAGAAAATCGCATGAAtttttttGGAAAACTAGGTTTTAATTCATCGATT 148
|||| |||||||||||||||||||||||||||| ||||||||||||||||| | ||||||
Sbjct 106 AAACAGATAAGAGAAAATCGCATGAATTTTTTTAGAAAACTAGGTTTTAATCCTTCGATT 165
Query 149 TCAAGCTACTTCACTAATACGTGTCTTCTGATTTCAATTCTTAGTTTTTCTCCTCAATTG 208
|||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct 166 GCAAGCTACTTCACTAATACGAGTCTTCTGATCTCAATTCTTAGTTTTTCTCCTCAATTG 225
Query 209 CCGATTTCGCTCTTTCTTTTTGAGCAGAAATCGTTAGATCCTTTATCGCTGAATAATACT 268
|||||||| ||||||||||| |||||||||||||||||||||||||||||| | || |
Sbjct 226 CCGATTTCTCTCTTTCTTTTCGAGCAGAAATCGTTAGATCCTTTATCGCTG--T-GTAAT 282
Query 269 AGTAATACTAATTTTAATAATCCCGTGAGTAATTAGTCTGATCATTGTTGAATCATGGAG 328
|||| ||||||||||||||||| | ||||||||| || | |||||||||||||||||||
Sbjct 283 AGTAGTACTAATTTTAATAATCTTGAGAGTAATTACTCCGTTCATTGTTGAATCATGGAG 342
Query 329 TCCGGAGGCAAAACTAATCGTCAGCTGCGTAAAGCTATTTGTGTCTCAGCCGACGAGAAG 388
||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||
Sbjct 343 TCCGGAGGCAAAACTAATCGTCAGCTGCGTAAAGCTATTTGCGTCTCAACAGACGAGAAG 402
Query 389 ATGAAGAAGAAGAGATCACCTTCAGTGATAGTGATTGGAGGTGGTATGGCTGGAATTTCA 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 403 ATGAAGAAGAAGAGATCACCTTCAGTGATAGTGATTGGAGGTGGTATGGCTGGAATTTCA 462
Query 449 GCTGCTCGCACTCTTCAAGATGCTTCCTTTCAGGTTGTGGTGTTGGAGTCTCGTGATAGA 508
|| |||||||||||||| |||||||||||||||||||| || |||||||||||||| |||
Sbjct 463 GCCGCTCGCACTCTTCAGGATGCTTCCTTTCAGGTTGTTGTATTGGAGTCTCGTGACAGA 522
Query 509 ATTGGTGGACGAGTTCACACTGATTACTCATTCGGTTTTCCAGTTGATCTGGGTGCATCT 568
|||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 523 ATTGGTGGACGAGTTCACACTGATTACTCATTTGGTTTTCCAGTTGATCTCGGTGCATCT 582
Query 569 TGGTTGCATGGTGTCTGTAAAGAGAATCCTCTGGCTGCAGTAATTGGGAGATTAGGATTA 628
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct 583 TGGTTGCATGGTGTCTGTAAAGAGAATCCTTTGGCTGCAGTAATTGGTAGATTAGGATTA 642
Query 629 CCCCTTTATCGTACTAGTGGTGACAATTCGGTTTTGTATGATCACGATCTTGAGAGCTAT 688
|| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 643 CCTCTTTATCGTACTAGCGGTGACAATTCGGTTTTGTATGATCACGATCTTGAGAGTTAT 702
Query 689 GCTCTATTCGACAAGGCTGGCAACCAAGTTCCTCAAGAGTTGGTAACAAAAGTTGGCGAA 748
||||| |||||||||||||| ||||||||| ||||||||||||| |||||||||||||||
Sbjct 703 GCTCTGTTCGACAAGGCTGGTAACCAAGTTTCTCAAGAGTTGGTGACAAAAGTTGGCGAA 762
Query 749 AATTTTGAGCACATTCTGGAAGAGATCTCTAAAGTCAGGGATGAGCAGGACGAAGACATG 808
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 763 AATTTTGAGCACATTCTGGAAGAGATCTGTAAAGTCAGGGATGAGCAGGACGAAGACATG 822
Query 809 TCAATAGCTCAAGCCTTTTCTATTGTATTCAAGAGGAACCCTGAATTGAGGTTGGAGGGG 868
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 823 TCAATAGCTCAAGCCTTTTCTATTGTATTTAAGAGGAACCCTGAATTGAGGTTGGAGGGA 882
Query 869 CTTGCTCATAATGTGCTTCAGTGGTACTTGTGCCGCATGGAAGGATGGTTTGCTGCTGAT 928
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 883 CTTGCCCATAATGTGCTTCAGTGGTACTTGTGCCGCATGGAAGGATGGTTTGCTGCTGAT 942
Query 929 GCTGAAACCATCTCGGCAAAGTGTTGGGACCAGGAAGAACTATTGCCTGGTGGACATGGT 988
||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||
Sbjct 943 GCTGAAACCATCTCGGCAAAGTGTTGGGATCAGGAAGAACTGTTGCCCGGTGGACATGGT 1002
Query 989 CTTATGGTTAGAGGGTATCGCCCTGTAATCAACACTCTCTCGAAAGGTCTTGATATACGA 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1003 CTTATGGTTAGAGGGTATCGCCCTGTAATCAACACTCTCTCGAAAGGTCTTGATATACGA 1062
Query 1049 CTAAGCCACAGGGTTACCAAGATTGT-AAGGCGCTACAGTGGAGTGAAGGTGACTACAGA 1107
||||| ||||| ||||||||||| | ||||||||||||||| |||||||||||||||||
Sbjct 1063 CTAAGTCACAGAATTACCAAGATT-TCAAGGCGCTACAGTGGTGTGAAGGTGACTACAGA 1121
Query 1108 GAAAGGAGACACGTTTGTTGCGGATGCTGCAGTCATTGCTCTTCCTCTTGGAGTTC-TAA 1166
|||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||
Sbjct 1122 GAAAGGAGACACGTTTGTTGCGGATGCTGCAGTCATTGCTCTTCCTCTAGGAG-TCTTAA 1180
Query 1167 AGTCAGGAATGATAACATTCGAACCAAAGCTTCCACAGTGGAAACAGGAAGCTATCAACG 1226
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1181 AGTCAGGAATGATAACATTCGAACCAAAGCTTCCACAGTGGAAACAAGAAGCTATCAACG 1240
Query 1227 ATCTCGGTGTAGGAATCGAGAACAAGATCATACTGCACTTTGACAATGTCTTTTGGCCAA 1286
|||||||||| ||||||||||||||||||||| || | |||||||| |||||||||||||
Sbjct 1241 ATCTCGGTGTTGGAATCGAGAACAAGATCATATTGAATTTTGACAACGTCTTTTGGCCAA 1300
Query 1287 ACGTAGAGTTTCTAGGAGTGGTTGCAGAAACTTCCTACGGATGCAGTTATTTCTTGAACC 1346
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1301 ACGTAGAGTTTTTAGGAGTCGTTGCAGAAACTTCCTACGGATGCAGTTATTTCTTGAACC 1360
Query 1347 TGCATAAAGCCACAAGCCATCCCGTTCTTGTTTACATGCCGGCTGGTCAGCTCGCTAGAG 1406
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 1361 TGCATAAAGCCACAAGCCATCCTGTCCTTGTTTACATGCCGGCTGGTCAGCTCGCTAGAG 1420
Query 1407 ACATAGAGAAAAAGTCTGATGAATCAGCTGCAAATTTTGCCTTTTCGCAACTCCAGAAAA 1466
|||| ||||||||||| |||||| |||||||||||||||||||||||||||| |||||||
Sbjct 1421 ACATCGAGAAAAAGTCCGATGAAGCAGCTGCAAATTTTGCCTTTTCGCAACTACAGAAAA 1480
Query 1467 TTCTTCCAGATGCATCTTCACCGATAAATTATTTGGTATCAAGGTGGGGATCAGACATCA 1526
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TTCTTCCAGATGCCTCTTCACCGATAAATTATTTGGTATCAAGGTGGGGATCAGACATCA 1540
Query 1527 ATTCATTGGGATCATATAGCTATGACATTGTGAACAAACCTCACGACCTCTATGAGAGAC 1586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1541 ATTCATTGGGATCATATAGCTATGACATTGTGAACAAACCTCACGACCTCTATGAGAGAC 1600
Query 1587 TGAGAGTGCCATTGGATAATCTATTCTTTGCGGGGGAAGCCACTAGCTCGAGCTACCCGG 1646
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1601 TGAGAGTGCCATTGGATAATCTATTCTTTGCGGGGGAAGCCACTAGCTCAAGCTACCCGG 1660
Query 1647 GGTCAGTGCACGGTGCTTATTCAACCGGAGTGCTGGCAGCTGAAGACTGCAGGATGCGTG 1706
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1661 GATCAGTGCACGGTGCTTATTCAACCGGAGTGCTGGCAGCTGAAGACTGCAGGATGCGTG 1720
Query 1707 TGCTTGAGCGCTATGGAGAGCTTGAACATGAGATGGAAGAGGAAGCTCCTGCTTCTGTCC 1766
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1721 TGCTTGAGCGCTATGGAGAGCTCGAACATGAGATGGAAGAGGAAGCTCCTGCTTCTGTCC 1780
Query 1767 CTCTTTTGATCTCCCGTATGTAGTTTGAACCTCAGGT-TGTTAGATT---TG-ATTTG-- 1819
||||| |||||||||||||||| ||| |||||||||| | ||| || | || ||
Sbjct 1781 CTCTTCTGATCTCCCGTATGTAATTTAAACCTCAGGTGTTTTATATCACCTCCATATGGG 1840
Query 1820 A-CTATT-T-A--T--GATTTCAT-A--T--CACTAGTTGGAACTCT----CA-ATGCCA 1862
| | ||| | | | ||||| || | | |||||||||||||||| | || | |
Sbjct 1841 AAC-ATTGTTAGATTTGATTTTATGAGATTTCACTAGTTGGAACTCTTGTGCCTATTCAA 1899
Query 1863 --C-ACTCTGATTTCCTTCAAATCTGATTCAGATCTTTAGTCGAAGTCAAATGTGCAATG 1919
| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1900 TACCACTCTTTTTTCCTTCAAATCTGATTCAGATCTTTAGTCGAAGTCAAATGTGCAATG 1959
Query 1920 TGGAGTATGTAATCCATCTGATCCGAGAACTATGTTTAAGTATTAATGCCAAACGCAAAC 1979
|||||||||||||||||||||| |||||||||||||||||| | ||||||| ||||||
Sbjct 1960 TGGAGTATGTAATCCATCTGATATAAGAACTATGTTTAAGTATCAGTGCCAAATGCAAAC 2019
Query 1980 TTCAAATAAAGATTTCTT 1997
||||||| ||| ||||||
Sbjct 2020 TTCAAATGAAGCTTTCTT 2037
Score = 76.8 bits (41), Expect = 7e-13
Identities = 41/41 (100%), Gaps = 0/41 (0%)
Strand=Plus/Plus
Query 1 CGACTCCTGAGCCTCTCTCTTTCTATCGCTCTTTGATTTTG 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct 3 CGACTCCTGAGCCTCTCTCTTTCTATCGCTCTTTGATTTTG 43
> AT2G43018.1 | Symbols: CPuORF17 | conserved peptide upstream
open reading frame 17 | chr2:17891504-17894633 FORWARD LENGTH=2107
Length=2107
Score = 1310 bits (709), Expect = 0.0
Identities = 1240/1494 (83%), Gaps = 46/1494 (3%)
Strand=Plus/Plus
Query 260 AATAATACTAGTAATAC-TAATTTTAATAATCCCGTGAGTAATTAGTCTGATC-ATTG-- 315
||||||| ||||||| | ||||| ||||||| || |||||| | || ||||| ||||
Sbjct 375 AATAATAATAGTAAT-CGTAATTCCAATAATCTCGAGAGTAA-TCGTTTGATCAATTGAA 432
Query 316 --TTGAATCATGGAGTCCGGAGGCAAAA--CTAATCGTCAGCTGCGTAAAGCTATTTG-T 370
||||||||||||| ||| |||| || ||||||| |||||| ||||| ||| |
Sbjct 433 AAAAAAATCATGGAGTCC--AGGAAAAACTCTGATCGTCAAATGCGTAGAGCTAATTGCT 490
Query 371 GTCTCAGCCGACGAGAAGATGAAGAAGAAGAGATCACCTTCAGTGATAGTGATTGGAGGT 430
| ||||| | |||| ||||||| | ||| | || || || ||||| ||||| ||||||
Sbjct 491 -TTTCAGCTGGTGAGAGGATGAAG-ACAAG-G-TCGCCCTCCGTGATTGTGATCGGAGGT 546
Query 431 GGTAT-GGCTGGAATTTCAGCTGCTCGCACTCTTCAAGATGCTTCCTTTCAGGTTGTGGT 489
||| | || ||| ||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct 547 GGTTTCGG-TGGGATTTCAGCTGCTCGCACTCTTCAGGATGCTTCCTTTCAGGTTATGGT 605
Query 490 GTTGGAGTCTCGTGATAGAATTGGTGGACGAGTTCACACTGATTACTCATTCGGTTTTCC 549
||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 606 ACTGGAGTCCCGTGACAGAATTGGTGGACGAGTTCACACTGATTACTCATTTGGTTTTCC 665
Query 550 AGTTGATCTGGGTGCATCTTGGTTGCATGGTGTCTGTAAAGAGAATCCTCTGGCTGCAGT 609
|||||||| |||||||| ||| ||||||| || || || ||||||||||| || ||||
Sbjct 666 TGTTGATCTTGGTGCATCATGGCTGCATGGAGTATGCAAGGAGAATCCTCTCGCACCAGT 725
Query 610 AATTGGGAGA-TTAGGATTACCCCTT-TATCGTACTAGTGGTGACAATTCGGTTTTGTAT 667
||||| ||| || ||| | ||| || ||||||||||| ||||||||||| || |||||
Sbjct 726 TATTGGAAGACTT-GGACTGCCC-TTGTATCGTACTAGCGGTGACAATTCCGTCCTGTAT 783
Query 668 GATCACGATCTTGAGAGCTATGCTCTATTCGACAAGGCTGGCAACCAAGTTCCTCAAGAG 727
||||| ||||| |||||||||||||| || || | || |||||||||||||||||||||
Sbjct 784 GATCATGATCTCGAGAGCTATGCTCTGTTTGATATGGATGGCAACCAAGTTCCTCAAGAA 843
Query 728 TTGGTAACAAA-AGTTGGCGAAAATTTTGAGCACATTCTGGAAGAGATCTCTAAAGTCAG 786
|||||||| | | |||||| || ||||||| ||| ||||||||||| |||||||||
Sbjct 844 TTGGTAACTCAGA-TTGGCGTAACGTTTGAGCGTATTTTGGAAGAGATCAATAAAGTCAG 902
Query 787 GGATGAGCAGGACGAAGACATGTCAATAGCTCAAGCCTTT-TCTATTGTATTCAAGAGGA 845
|||||||||||| | ||||| ||||| |||| || ||| || ||||| || ||||
Sbjct 903 GGATGAGCAGGATGCTGACATTTCAATTTCTCAGGC-TTTCTCAATTGTCTTTTCTAGGA 961
Query 846 A-CCCTGAATTGAGGTTGGAGGGGCTTGCTCATAATGTGCTTCAGTGGTACT-TGTGCCG 903
| ||| || ||||||| ||||||||||| || || || ||||| ||||| | | |||||
Sbjct 962 AACCC-GAGCTGAGGTTAGAGGGGCTTGCACACAACGTACTTCAATGGTA-TGTATGCCG 1019
Query 904 CATGGAAGGATGGTTTGCTGCTGATGCTGAAACCATCTCGGCAAAGTGTTGGGACCAGGA 963
|||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||
Sbjct 1020 CATGGAAGGATGGTTTGCCGCAGATGCTGAAACCATCTCTGCAAAGTGTTGGGACCAGGA 1079
Query 964 AGAACTATTGCCTGGTGGACATGGTCTTATGGTTAGAGGGTATCGCCCTGTAATCAACAC 1023
||| | |||||||||||||| ||||||||||||||||||||||| ||||| ||||| ||
Sbjct 1080 GGAATTGTTGCCTGGTGGACACGGTCTTATGGTTAGAGGGTATCGTCCTGTCATCAATAC 1139
Query 1024 TCTCTCGAAAGGTCTTGATATACGACTAAGCCACAGGGTTACCAAGATTGTAAGGCGCTA 1083
||| |||||||||||||||| ||| || ||||||||||||| |||||||| ||||| ||
Sbjct 1140 TCTGGCGAAAGGTCTTGATATCCGAGTAGGCCACAGGGTTACTAAGATTGTCAGGCGGTA 1199
Query 1084 CAGTGGAGTGAAGGTGACTACAGAGAAA-GGAG-ACACGTTTGTTGCGGATGCTGCAGTC 1141
|| |||||||||||| || ||||| ||| || | | || |||||||||||||||||||||
Sbjct 1200 CAATGGAGTGAAGGTAACGACAGA-AAACGG-GCAAACTTTTGTTGCGGATGCTGCAGTC 1257
Query 1142 ATTGCTCTTCCTCTTGGAGTTCTAAAGTCAGGAATGATAACA-TTCGAACCAAAGCTTCC 1200
|||||| | |||||||||||| |||| || |||| |||| | |||||||| ||||| ||
Sbjct 1258 ATTGCTGTCCCTCTTGGAGTTTTAAAATCGGGAACCATAA-AGTTCGAACCTAAGCTACC 1316
Query 1201 ACAGTGGAAACAGGAAGCTATCAACGATCTCGGTGTAGGAATCGAGAACAAGATCATACT 1260
|||||||||| ||||| |||||||| || || ||||| || |||||||||||||||||
Sbjct 1317 TGAGTGGAAACAAGAAGCAATCAACGACCTAGGAGTAGGTATTGAGAACAAGATCATACT 1376
Query 1261 GCACTTTGACAATGTCTTTTGGCC-AAACGTAGAGTTTCTAGGAGTGGTTGCAGAAACTT 1319
|| ||||| || ||||||||||| ||| |||||||||||||||||||| || ||||| |
Sbjct 1377 ACATTTTGAGAAAGTCTTTTGGCCGAAA-GTAGAGTTTCTAGGAGTGGTAGCTGAAACCT 1435
Query 1320 CCTACGGATGCAGTTATTTCTTGAACCTGCATAAAGCCACAAGCCATCCCGTTCTTGTTT 1379
||||||| ||||||||||| ||||||||||| || ||||| | ||||| ||||| ||||
Sbjct 1436 CCTACGGTTGCAGTTATTTTTTGAACCTGCACAAGGCCACGGGTCATCCGGTTCTGGTTT 1495
Query 1380 ACATGCCGGCTGGTCAGCTCGCTAGAGACATAGAGAAAAAGTCTGATGAATCAGCTGCAA 1439
||||||||||||||||||| || | |||||| ||||||| |||||||||| |||||||||
Sbjct 1496 ACATGCCGGCTGGTCAGCTTGCCAAAGACATTGAGAAAATGTCTGATGAAGCAGCTGCAA 1555
Query 1440 ATTTTGCCTT-TTCGCAACTCCAGAAAATTCTTCCAGATGCATCTTCA-CCGATAAATTA 1497
|||| ||| | || ||||||||||| ||||||||| ||||||| | | ||| || | ||
Sbjct 1556 ATTTCGCCGTCTT-GCAACTCCAGAGAATTCTTCCCGATGCAT-TGCCTCCGGTACAGTA 1613
Query 1498 TTTGGTATCAAGGTGGGGATCAGACATCAATTCATTGGGATCATATAGCTATGACATTGT 1557
| | || || ||||||||||| || | |||||| ||||||| ||||||||||| || ||
Sbjct 1614 TCTCGTGTCGAGGTGGGGATCTGATGTGAATTCAATGGGATCTTATAGCTATGATATCGT 1673
Query 1558 GAACAAACCTCACGACCTCTATGAGAGACTGAGAGTGCCATTGGATAATCT-ATTCTTTG 1616
| ||||||||| || ||||| ||||| || || || ||| ||||||| || ||||||||
Sbjct 1674 GGGCAAACCTCATGATCTCTACGAGAGGCTTAGGGTTCCAGTGGATAA-CTTATTCTTTG 1732
Query 1617 CGGGGGAAGCCACTAGCTCGAGCTACCCGGGGTCAGTGCACGGTGCTTATTCAACCGGAG 1676
| || ||||| || |||||||||| |||||| || || ||||| ||||||||||| |||
Sbjct 1733 CCGGTGAAGCGACGAGCTCGAGCTTCCCGGGCTCGGTTCACGGCGCTTATTCAACTGGAT 1792
Query 1677 TGCTGGCAGCTGAAGACTGCAGGATGCGTGTGCTTGAGCGCTATGGAGAGCTTG 1730
|| ||||||||||||| || |||||||| || || ||||| ||||| ||| |||
Sbjct 1793 TGATGGCAGCTGAAGATTGTAGGATGCGAGTTCTGGAGCGGTATGGTGAG-TTG 1845
> AT2G43020.1 | Symbols: ATPAO2, PAO2 | polyamine oxidase 2 | chr2:17891503-17894635
FORWARD LENGTH=2110
Length=2110
Score = 1310 bits (709), Expect = 0.0
Identities = 1240/1494 (83%), Gaps = 46/1494 (3%)
Strand=Plus/Plus
Query 260 AATAATACTAGTAATAC-TAATTTTAATAATCCCGTGAGTAATTAGTCTGATC-ATTG-- 315
||||||| ||||||| | ||||| ||||||| || |||||| | || ||||| ||||
Sbjct 376 AATAATAATAGTAAT-CGTAATTCCAATAATCTCGAGAGTAA-TCGTTTGATCAATTGAA 433
Query 316 --TTGAATCATGGAGTCCGGAGGCAAAA--CTAATCGTCAGCTGCGTAAAGCTATTTG-T 370
||||||||||||| ||| |||| || ||||||| |||||| ||||| ||| |
Sbjct 434 AAAAAAATCATGGAGTCC--AGGAAAAACTCTGATCGTCAAATGCGTAGAGCTAATTGCT 491
Query 371 GTCTCAGCCGACGAGAAGATGAAGAAGAAGAGATCACCTTCAGTGATAGTGATTGGAGGT 430
| ||||| | |||| ||||||| | ||| | || || || ||||| ||||| ||||||
Sbjct 492 -TTTCAGCTGGTGAGAGGATGAAG-ACAAG-G-TCGCCCTCCGTGATTGTGATCGGAGGT 547
Query 431 GGTAT-GGCTGGAATTTCAGCTGCTCGCACTCTTCAAGATGCTTCCTTTCAGGTTGTGGT 489
||| | || ||| ||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct 548 GGTTTCGG-TGGGATTTCAGCTGCTCGCACTCTTCAGGATGCTTCCTTTCAGGTTATGGT 606
Query 490 GTTGGAGTCTCGTGATAGAATTGGTGGACGAGTTCACACTGATTACTCATTCGGTTTTCC 549
||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 607 ACTGGAGTCCCGTGACAGAATTGGTGGACGAGTTCACACTGATTACTCATTTGGTTTTCC 666
Query 550 AGTTGATCTGGGTGCATCTTGGTTGCATGGTGTCTGTAAAGAGAATCCTCTGGCTGCAGT 609
|||||||| |||||||| ||| ||||||| || || || ||||||||||| || ||||
Sbjct 667 TGTTGATCTTGGTGCATCATGGCTGCATGGAGTATGCAAGGAGAATCCTCTCGCACCAGT 726
Query 610 AATTGGGAGA-TTAGGATTACCCCTT-TATCGTACTAGTGGTGACAATTCGGTTTTGTAT 667
||||| ||| || ||| | ||| || ||||||||||| ||||||||||| || |||||
Sbjct 727 TATTGGAAGACTT-GGACTGCCC-TTGTATCGTACTAGCGGTGACAATTCCGTCCTGTAT 784
Query 668 GATCACGATCTTGAGAGCTATGCTCTATTCGACAAGGCTGGCAACCAAGTTCCTCAAGAG 727
||||| ||||| |||||||||||||| || || | || |||||||||||||||||||||
Sbjct 785 GATCATGATCTCGAGAGCTATGCTCTGTTTGATATGGATGGCAACCAAGTTCCTCAAGAA 844
Query 728 TTGGTAACAAA-AGTTGGCGAAAATTTTGAGCACATTCTGGAAGAGATCTCTAAAGTCAG 786
|||||||| | | |||||| || ||||||| ||| ||||||||||| |||||||||
Sbjct 845 TTGGTAACTCAGA-TTGGCGTAACGTTTGAGCGTATTTTGGAAGAGATCAATAAAGTCAG 903
Query 787 GGATGAGCAGGACGAAGACATGTCAATAGCTCAAGCCTTT-TCTATTGTATTCAAGAGGA 845
|||||||||||| | ||||| ||||| |||| || ||| || ||||| || ||||
Sbjct 904 GGATGAGCAGGATGCTGACATTTCAATTTCTCAGGC-TTTCTCAATTGTCTTTTCTAGGA 962
Query 846 A-CCCTGAATTGAGGTTGGAGGGGCTTGCTCATAATGTGCTTCAGTGGTACT-TGTGCCG 903
| ||| || ||||||| ||||||||||| || || || ||||| ||||| | | |||||
Sbjct 963 AACCC-GAGCTGAGGTTAGAGGGGCTTGCACACAACGTACTTCAATGGTA-TGTATGCCG 1020
Query 904 CATGGAAGGATGGTTTGCTGCTGATGCTGAAACCATCTCGGCAAAGTGTTGGGACCAGGA 963
|||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||
Sbjct 1021 CATGGAAGGATGGTTTGCCGCAGATGCTGAAACCATCTCTGCAAAGTGTTGGGACCAGGA 1080
Query 964 AGAACTATTGCCTGGTGGACATGGTCTTATGGTTAGAGGGTATCGCCCTGTAATCAACAC 1023
||| | |||||||||||||| ||||||||||||||||||||||| ||||| ||||| ||
Sbjct 1081 GGAATTGTTGCCTGGTGGACACGGTCTTATGGTTAGAGGGTATCGTCCTGTCATCAATAC 1140
Query 1024 TCTCTCGAAAGGTCTTGATATACGACTAAGCCACAGGGTTACCAAGATTGTAAGGCGCTA 1083
||| |||||||||||||||| ||| || ||||||||||||| |||||||| ||||| ||
Sbjct 1141 TCTGGCGAAAGGTCTTGATATCCGAGTAGGCCACAGGGTTACTAAGATTGTCAGGCGGTA 1200
Query 1084 CAGTGGAGTGAAGGTGACTACAGAGAAA-GGAG-ACACGTTTGTTGCGGATGCTGCAGTC 1141
|| |||||||||||| || ||||| ||| || | | || |||||||||||||||||||||
Sbjct 1201 CAATGGAGTGAAGGTAACGACAGA-AAACGG-GCAAACTTTTGTTGCGGATGCTGCAGTC 1258
Query 1142 ATTGCTCTTCCTCTTGGAGTTCTAAAGTCAGGAATGATAACA-TTCGAACCAAAGCTTCC 1200
|||||| | |||||||||||| |||| || |||| |||| | |||||||| ||||| ||
Sbjct 1259 ATTGCTGTCCCTCTTGGAGTTTTAAAATCGGGAACCATAA-AGTTCGAACCTAAGCTACC 1317
Query 1201 ACAGTGGAAACAGGAAGCTATCAACGATCTCGGTGTAGGAATCGAGAACAAGATCATACT 1260
|||||||||| ||||| |||||||| || || ||||| || |||||||||||||||||
Sbjct 1318 TGAGTGGAAACAAGAAGCAATCAACGACCTAGGAGTAGGTATTGAGAACAAGATCATACT 1377
Query 1261 GCACTTTGACAATGTCTTTTGGCC-AAACGTAGAGTTTCTAGGAGTGGTTGCAGAAACTT 1319
|| ||||| || ||||||||||| ||| |||||||||||||||||||| || ||||| |
Sbjct 1378 ACATTTTGAGAAAGTCTTTTGGCCGAAA-GTAGAGTTTCTAGGAGTGGTAGCTGAAACCT 1436
Query 1320 CCTACGGATGCAGTTATTTCTTGAACCTGCATAAAGCCACAAGCCATCCCGTTCTTGTTT 1379
||||||| ||||||||||| ||||||||||| || ||||| | ||||| ||||| ||||
Sbjct 1437 CCTACGGTTGCAGTTATTTTTTGAACCTGCACAAGGCCACGGGTCATCCGGTTCTGGTTT 1496
Query 1380 ACATGCCGGCTGGTCAGCTCGCTAGAGACATAGAGAAAAAGTCTGATGAATCAGCTGCAA 1439
||||||||||||||||||| || | |||||| ||||||| |||||||||| |||||||||
Sbjct 1497 ACATGCCGGCTGGTCAGCTTGCCAAAGACATTGAGAAAATGTCTGATGAAGCAGCTGCAA 1556
Query 1440 ATTTTGCCTT-TTCGCAACTCCAGAAAATTCTTCCAGATGCATCTTCA-CCGATAAATTA 1497
|||| ||| | || ||||||||||| ||||||||| ||||||| | | ||| || | ||
Sbjct 1557 ATTTCGCCGTCTT-GCAACTCCAGAGAATTCTTCCCGATGCAT-TGCCTCCGGTACAGTA 1614
Query 1498 TTTGGTATCAAGGTGGGGATCAGACATCAATTCATTGGGATCATATAGCTATGACATTGT 1557
| | || || ||||||||||| || | |||||| ||||||| ||||||||||| || ||
Sbjct 1615 TCTCGTGTCGAGGTGGGGATCTGATGTGAATTCAATGGGATCTTATAGCTATGATATCGT 1674
Query 1558 GAACAAACCTCACGACCTCTATGAGAGACTGAGAGTGCCATTGGATAATCT-ATTCTTTG 1616
| ||||||||| || ||||| ||||| || || || ||| ||||||| || ||||||||
Sbjct 1675 GGGCAAACCTCATGATCTCTACGAGAGGCTTAGGGTTCCAGTGGATAA-CTTATTCTTTG 1733
Query 1617 CGGGGGAAGCCACTAGCTCGAGCTACCCGGGGTCAGTGCACGGTGCTTATTCAACCGGAG 1676
| || ||||| || |||||||||| |||||| || || ||||| ||||||||||| |||
Sbjct 1734 CCGGTGAAGCGACGAGCTCGAGCTTCCCGGGCTCGGTTCACGGCGCTTATTCAACTGGAT 1793
Query 1677 TGCTGGCAGCTGAAGACTGCAGGATGCGTGTGCTTGAGCGCTATGGAGAGCTTG 1730
|| ||||||||||||| || |||||||| || || ||||| ||||| ||| |||
Sbjct 1794 TGATGGCAGCTGAAGATTGTAGGATGCGAGTTCTGGAGCGGTATGGTGAG-TTG 1846
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 98945274195
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5