BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486380
Length=2397
Score E
Sequences producing significant alignments: (Bits) Value
AT3G59110.1 | Symbols: | Protein kinase superfamily protein | ... 3526 0.0
AT2G42960.1 | Symbols: | Protein kinase superfamily protein | ... 1363 0.0
> AT3G59110.1 | Symbols: | Protein kinase superfamily protein
| chr3:21854719-21858204 FORWARD LENGTH=2417
Length=2417
Score = 3526 bits (1909), Expect = 0.0
Identities = 2271/2437 (93%), Gaps = 60/2437 (2%)
Strand=Plus/Plus
Query 1 TGTCAAAGTTCACCATCTTTGCTTTCCCTTCACTGCTCTCTCTCTTTCTGTATTTCTTTT 60
|||||||||||||||||||||||||||||||||||||||||||||||| | || | |
Sbjct 1 TGTCAAAGTTCACCATCTTTGCTTTCCCTTCACTGCTCTCTCTCTTTC----TCTC-TCT 55
Query 61 TTGTTGATTTTG-TTTCCTCAAATTGCAAATCAAAGCTTTCTTTCCAGCTTTAGGACACA 119
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 56 TTGTTGATTTTGTTTTCCTCAAATTGCAAATCAAAGCTTTCTTTCCAGCTTTAGAACACA 115
Query 120 CTCTCACCAACAATCTCACCCAAC-TTTTTTCCCTCTTTTAACTCCTCACTAATTCCTAA 178
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 116 CTCTCACCAACAATCTCACCCAACTTTTTTTCCTTCTTTTAACTCCTCACTAATTCCTAA 175
Query 179 TCCCACAAACCCTAATCTCTCTCTCTTTAAT-CCTTCCTTACATACATTATTTCAATATA 237
||||||||||||||| |||| |||||||||| |||||||||||||||||| ||| | ||
Sbjct 176 TCCCACAAACCCTAAACTCTATCTCTTTAATCCCTTCCTTACATACATTA-TTC-A-GTA 232
Query 238 GTTGAGTAAAGTTTCTATCTTTCTTCTGATTCCTTG-TGGAATTACCTAAATTTTCT--G 294
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |
Sbjct 233 GTTGAGTAAAGTTTCAATCTTTCTTCTGATTCCTTGTTGGAATTACCTAAATTTTCTGGG 292
Query 295 --------GGTGGGCTCGTCGAGAGAAACTTCAATTGCAATTCATCGCTAAGCATATCTA 346
|||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct 293 TTTATTTTGGTGGGCTCGTCGAGAGATACTTCAATTGCAATTCATCGTTAAGCATATCTA 352
Query 347 TGCTAATTGCGTTCTCTTCTTTATTTCACTTTCTCTTTGGTTTGCTTCAAAATCAAAGAA 406
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 353 TGCTAATTGCGTTCTCTTCTTTATTTCACTTTCTCTTTGGTTTGCTTCAATATCAAAGCA 412
Query 407 AAGGGGGACC-TTTCTCTTTGCTTTCTTCTCTTCTAATCGAAAAGGCAAGAGCTTAAGTC 465
||| |||||| |||| |||||| |||||||||||||||||||||| ||||||||| ||||
Sbjct 413 AAGAGGGACCTTTTCGCTTTGCGTTCTTCTCTTCTAATCGAAAAGACAAGAGCTT-AGTC 471
Query 466 A-CATTTTACT-AGGTGGGGTTTGTGAAGTTGTGAGCAAAAGGAACCAAAGATGTCATCT 523
| || || || ||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 472 ACCACATT-CTAAGGTGGGAATTGTGAAGTTGTGAGCAAAAGGAACCAAAAATGTCATCT 530
Query 524 GAGAGTTCTTTGAGTGCTGACATGTCCAAGAAGGTCTCATTTTTAGGTTTGAAGGGTATG 583
||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 531 GAGAGTTCTCTGAGTGCTGACATGTCGAAGAAGGTCTCATTTTTAGGTTTGAAGGGTATG 590
Query 584 AAACTGTGGGTTTTGATTTGTTTAGTAGTTGGCACATTTGTAGTTTTGGTTCTCTGCATA 643
||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct 591 AAACTGTGGGTACTGATTTGTTTAGTAGTTGGCACATTTGTAGTTTTGGTTTTCTGTATA 650
Query 644 TTATCTCTATGGATTGCATTCCGCCGTAAATCCCGGAGATCATCTCACAAGCTGTTACCC 703
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 651 TTATCTCTATGGATTGCATTCCGCCGGAAATCCCGGAGATCATCTCACAAGCTGTTACCC 710
Query 704 TTCAGTCAAATACCACGTTTGGCGAAAGATATCAGGGTTGATGATAGAGTTGGGTTTCAA 763
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 711 TTCAGTCAAATACCACGCGTGGCGAAAGATATCAGGGTTGATGATAGAGTTGGGTTTCAA 770
Query 764 GATCATAATGAAAATTTATGTATCACCAATGCTGATAAATCTAGCGACAGAAACTC-GGG 822
|||||||||||||||||| |||||| ||||||||||||||||| ||||||||||| |||
Sbjct 771 AATCATAATGAAAATTTATCTATCACAAATGCTGATAAATCTAGTGACAGAAACTCTGGG 830
Query 823 AAAGATGATGTCTTTCTTGGGAAGAACGAAGTCTAGTGATAATGATAGTATAAGTCAATG 882
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 831 -AAGATGATGTCTTACTTGGGAAGAACGAAGTCTAGTGATAATGATAGTATAAGTCAATG 889
Query 883 TAGCTCTGTGCATCATCATGAGAGAGCTTGTAGTTCTCACTCCGGTGAAGATGGAAGCTT 942
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 890 TAGCTCTGTGCATCATCATGAGAGAGCTTGTAGTTCTCACTCTGGTGAAGATGGAAGCTT 949
Query 943 TGGAACCGCTTGGAGGCAAGCTTCCCTATCGCAGGGCGGACTTGTAACAGCATCTCCTTT 1002
|||| | |||||||| ||| ||||||||| |||||||| || |||||||||||||||||
Sbjct 950 TGGAGCTGCTTGGAGACAAAATTCCCTATCACAGGGCGGGCTAGTAACAGCATCTCCTTT 1009
Query 1003 GGTTGGTTTGCCAGAAATATCTCATCTTGGCTGGGGACACTGGTTTACTCTAAGGGATCT 1062
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 1010 GGTTGGTTTGCCAGAAATATCTCATCTTGGTTGGGGACACTGGTTTACTCTTAGGGATCT 1069
Query 1063 TCAGCTAGCCACCAACCGTTTTGCTGCAGAAAATGTAATCGGTGAGGGTGGTTATGGAGT 1122
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1070 TCAGCTAGCCACCAACCGTTTTGCTGCTGAAAATGTAATCGGTGAGGGTGGTTATGGAGT 1129
Query 1123 AGTTTATAAGGGTAGACTCATCAACGGTAACGATGTTGCTGTAAAGAAGCTTCTTAACAA 1182
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1130 AGTTTATAAGGGTAGACTCATCAACGGTAATGATGTTGCTGTAAAGAAGCTTCTTAACAA 1189
Query 1183 TCTGGGACAGGCTGAGAAGGAATTCCGTGTTGAAGTTGAGGCTATTGGTCATGTACGGCA 1242
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1190 TCTGGGACAGGCTGAGAAGGAATTCCGGGTTGAAGTTGAGGCTATTGGTCATGTACGGCA 1249
Query 1243 CAAGAATCTTGTAAGGCTTCTAGGATATTGCATAGAGGGTGTTAATAGGATGCTTGTTTA 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1250 CAAGAATCTTGTAAGGCTTCTAGGATATTGCATAGAGGGTGTTAATAGGATGCTTGTTTA 1309
Query 1303 TGAGTATGTGAATAGTGGTAACTTAGAACAATGGCTACATGGAGCCATGGGGAAACATAG 1362
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 1310 TGAGTATGTGAATAGTGGTAACTTAGAACAATGGCTACATGGAGCCATGGGAAAACAAAG 1369
Query 1363 CACTCTCACTTGGGAGGCTCGCATGAAGATCCTTGTCGGTACTGCGCAAGCGCTTGCTTA 1422
||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||
Sbjct 1370 CACTCTCACTTGGGAGGCTCGCATGAAAATCCTTGTTGGTACTGCGCAGGCGCTTGCTTA 1429
Query 1423 TTTGCATGAAGCAATAGAACCAAAAGTAGTCCACAGAGACATAAAAGCAAGCAATATCCT 1482
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1430 TTTACATGAAGCAATAGAACCAAAAGTAGTCCACAGAGACATAAAAGCAAGCAATATCCT 1489
Query 1483 GATTGATGATGACTTTAATGCAAAGCTTTCCGATTTTGGGTTAGCCAAGCTCTTAGACTC 1542
|||||| |||||||| |||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 1490 GATTGACGATGACTTCAATGCAAAGCTTTCTGATTTTGGGTTGGCCAAGCTCTTAGACTC 1549
Query 1543 GGGTGAGAGTCACATCACGACCAGAGTCATGGGCACCTTTGGGTATGTCGCACCCGAATA 1602
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 1550 GGGTGAGAGTCACATCACGACCAGAGTCATGGGAACCTTTGGATATGTCGCACCCGAATA 1609
Query 1603 TGCTAATACAGGTCTATTGAATGAGAAGAGTGACATCTATAGCTTTGGTGTCCTGCTGCT 1662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1610 TGCTAATACAGGTCTATTGAATGAGAAGAGTGACATCTATAGCTTTGGTGTCCTGCTGCT 1669
Query 1663 AGAGACTATAACTGGAAGGGATCCAGTTGACTATGAGCGTCCAGCTAATGAGGTGAATCT 1722
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 1670 AGAGACTATAACTGGAAGAGATCCAGTTGACTATGAACGTCCAGCTAATGAGGTGAATCT 1729
Query 1723 GGTTGAATGGCTAAAGATGATGGTTGGAACAAGAAGAGCTGAAGAAGTTGTTGATTCAAG 1782
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1730 GGTCGAATGGCTAAAGATGATGGTTGGAACAAGAAGAGCTGAAGAAGTTGTTGACTCAAG 1789
Query 1783 GATTGAGCCTCCACCCGCTACACGTGCTCTGAAACGTGCACTTCTTGTTGCCCTGAGATG 1842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1790 GATTGAGCCTCCACCCGCTACACGTGCTCTGAAACGTGCACTTCTTGTTGCCCTGAGATG 1849
Query 1843 TGTGGATCCTGAAGCACAGAAAAGGCCTAAAATGAGCCAGGTTGTGCGGATGCTTGAATC 1902
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1850 TGTGGATCCTGAAGCACAGAAACGGCCTAAAATGAGCCAGGTTGTGCGGATGCTTGAATC 1909
Query 1903 CGATGAACACCCTTTCCGTGAGGAGCGGAGGAACAGAAAAAGTAGAACAGCGAGTATGGA 1962
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1910 CGATGAACACCCTTTTCGTGAGGAGCGGAGGAACAGAAAGAGTAGAACAGCGAGTATGGA 1969
Query 1963 GATTGTCGAGACCACTGAGGAATCAGCTGACACAAGCAAACGGCCTGGTGACTCAGAGAA 2022
|||||| || |||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 1970 GATTGTTGAAACCACTGAGGAATCAGCTGACACAAGCAAAGGGCCTGGTCACTCAGAGAA 2029
Query 2023 CCACACTACAAAACCTGAGAAGACTCATGTATAGGAAATATGTCGCAA-ACCCCGTGAAA 2081
| || |||||||||||||||||||||||||||||||| ||||||| | |||| ||||||
Sbjct 2030 C-AC--TACAAAACCTGAGAAGACTCATGTATAGGAAACATGTCGCTAGACCCAGTGAAA 2086
Query 2082 AACTCAGCTAAGTAGCTTCACACCCTCAAATGCTCTACTAATCGATGACGAATGAGTTT- 2140
| ||||||||||| ||||||||| ||||||||||||| |||||||| | |||||||||
Sbjct 2087 AT-TCAGCTAAGTAACTTCACACCATCAAATGCTCTACCAATCGATGGCAAATGAGTTTT 2145
Query 2141 CTCCGTGCTG-T---GGAGAAACAAAACAAATCCGGTAAAAGAAGAT-CA-A--AA--GA 2190
||| ||||| | ||||||||||||||||| ||||||||||||| || | || ||
Sbjct 2146 CTC-GTGCTTCTTCTGGAGAAACAAAACAAATTGGGTAAAAGAAGATTCAGATCAAAAGA 2204
Query 2191 GCTGTTCCAGTTATTTCTAACATCCGCCAAGTAAC-TAATGATGC-CTTTTG-TCTCTCT 2247
||||| ||||||||||||||||||||||| ||| | | || | | || ||| | | | |
Sbjct 2205 GCTGTACCAGTTATTTCTAACATCCGCCAGGTAGCGTT-TGGT-CTCTCTTGATATTTGT 2262
Query 2248 TGA-T-ATTTGTAATTCTGG-GTTCTTCTAT--G--TCTTGGCTTTTAGGATGTGAAACA 2300
| | ||| || |||| || ||||||| | ||||||||||||||||||||||||
Sbjct 2263 AAAATTATTGGTTCTTCTATAGT-CTTCTATCTGAGTCTTGGCTTTTAGGATGTGAAACA 2321
Query 2301 TTAGCCATAGCTGATTTGTTGTTGTACTAAGAATTGAATTCATTTGTCATCCTCTCTCTT 2360
||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||| ||
Sbjct 2322 TTAGCCATAGCAGATTTGTTGTTGTACTAAGATTTGAATTCATTTGTCATCC-CTCTATT 2380
Query 2361 GATTGAGACCTGTATATATAATCAAGTTGTGTGACAT 2397
|||||||| ||||||||||||||||| |||||||||
Sbjct 2381 GATTGAGATATGTATATATAATCAAGTCGTGTGACAT 2417
> AT2G42960.1 | Symbols: | Protein kinase superfamily protein
| chr2:17868597-17870630 REVERSE LENGTH=1485
Length=1485
Score = 1363 bits (738), Expect = 0.0
Identities = 1247/1488 (84%), Gaps = 53/1488 (4%)
Strand=Plus/Plus
Query 515 ATGTCATCTGAGAGTTCTTTGAGTGCTGACATGTCCAAGAAGGTCTCATTTTTAGGTTTG 574
||| || ||||||||||||| | ||||| |||||||||||| | |||||||| ||||||
Sbjct 1 ATGCCACCTGAGAGTTCTTTAAACGCTGAAATGTCCAAGAAGATATCATTTTTTGGTTTG 60
Query 575 AAGGGTATGAAACTGTGGGTTTTGATTTGTTTAGTAGTTGGCA-CATTTGTAGTTTTGGT 633
|||||| |||| ||||||| | | | ||||| |||||||| | ||| ||||| || |
Sbjct 61 AAGGGTTTGAAGTTGTGGGTATGGGTATGTTTGGTAGTTGG-AGTATTCATAGTTATGAT 119
Query 634 TCTCTGCATATTATCTCTATGGATTGCATTCCGCCGTAAATCCCGGAGATCATCTCACAA 693
||||||||| || ||||||||||| ||||||| || ||||| | || || | | |||
Sbjct 120 TCTCTGCATCTTGTCTCTATGGATCACATTCCGTCGGAAATCTAGAAGGTC-T-T--CAA 175
Query 694 GC-TGTTACCCTTCAGTCAAATACCACGTTTGGCGAAAGATATCAGGGTTGATGATAGAG 752
|| ||| || |||| |||||||||| | || | ||||||||||| | | || || |
Sbjct 176 GCAAGTTTCCTTTCAACCAAATACCACATGTGTCCAAAGATATCAGAG-T--CGACAGGG 232
Query 753 TTGGGTTTCAAG-ATCAT-A--ATGAAAATTTATGTATCACCAATG-CTGATAAATCTAG 807
|||||||| || ||| | | |||| ||||| ||| | |||| |||||||||
Sbjct 233 CTGGGTTTC-AGAATCCTCACCCCGAAAGTTTATATAT-AGAAATGAATGATAAATC--- 287
Query 808 CGAC-AGAAACTCGGGAAAGATGATGTCTTTCTTGGGAAGAACGAAGTCTAGTGATAATG 866
| || |||| || |||||||||| |||||||||||| ||||||||||||||||
Sbjct 288 C-ACTGGAAA------AACGATGATGTCTCACTTGGGAAGAACCAAGTCTAGTGATAATG 340
Query 867 ATAGTATAAGTCAATGTAGCTCTGTGCATCATCATGAGAGAGCTTGTAGTTCTCACTCCG 926
| | | | |||||||||||||||||| |||| ||||||||||||||||||||||| || |
Sbjct 341 ACACTTTGAGTCAATGTAGCTCTGTGAATCACCATGAGAGAGCTTGTAGTTCTCATTCTG 400
Query 927 GTGAAGATGGAAGCTTTGGAACCGCTTGGAGGCAAGCTTCCCTATCGCAGGGCGGACTTG 986
||||||| ||| ||||||||| ||| |||| | || ||| | | || |||| ||
Sbjct 401 GTGAAGAAGGAGGCTTTGGAAGTGCTGGGAGAC-AG------TAT-GGA-GGAGGACCTG 451
Query 987 TAACAGCATCTCCTTTGGTTGGTTTGCCAGAAATATCTCATCTTGGCTGGGGACACTGGT 1046
||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||
Sbjct 452 TAACAGCATCTCCTTTGGTTGGTTTACCAGAAATATCCCATCTTGGTTGGGGACACTGGT 511
Query 1047 TTACTCTAAGGGATCTTCAGCTAGCCACCAACCGTTTTGCTGCAGAAAATGTAATCGGTG 1106
||||||| ||||||||| ||||||| ||||||||||||||| ||| ||||| | || |
Sbjct 512 TTACTCTTAGGGATCTTGAGCTAGCAACCAACCGTTTTGCTCCAGTGAATGTGCTTGGAG 571
Query 1107 AGGGTGGTTATGGAGTAGTTTATAAGGGTAGACTCATCAACGGTAACGATGTTGCTGTAA 1166
|||||||||||||||||||||||| ||||| ||| | || |||| ||| ||||||||||
Sbjct 572 AGGGTGGTTATGGAGTAGTTTATAGGGGTAAACTTGTTAATGGTACCGAGGTTGCTGTAA 631
Query 1167 AGAAGCTTCTTAACAATCT-GGGACAGGCTGAGAAGGAATTCCGTGTTGAAGTTGAGGCT 1225
|||||||||| |||||||| ||| || |||||||||||||| || || ||||||||||||
Sbjct 632 AGAAGCTTCTGAACAATCTAGGG-CAAGCTGAGAAGGAATTTCGGGTAGAAGTTGAGGCT 690
Query 1226 ATTGGTCATGTACGGCACAAGAATCTTGTAAGGCTTCTAGGATATTGCATAGAGGGTGTT 1285
||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||
Sbjct 691 ATTGGTCATGTACGGCACAAGAATCTTGTTAGGCTTTTAGGATATTGCATAGAGGGAGTT 750
Query 1286 AATAGGATGCTTGTTTATGAGTATGTGAATAGTGGTAACTTAGAACAATGGCTACATGGA 1345
|| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 751 CATCGGATGCTTGTTTATGAGTATGTTAATAGTGGTAACTTAGAACAATGGCTACATGGA 810
Query 1346 GCCATGGGGAAACATAGCACTCTCACTTGGGAGGCTCGCATGAAGATCCTTG-TCGGTAC 1404
|| ||| || ||||| | | |||||||||||| || || ||||| ||| || | |||||
Sbjct 811 GCAATGCGGCAACATGGAAATCTCACTTGGGAAGCACGGATGAAAATCATTACT-GGTAC 869
Query 1405 TGCGCAAGCGCTTGCTTATTTGCATGAAGCAATAGAACCAAAAGTAGTCCACAGAGACAT 1464
||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct 870 TGCACAAGCGCTTGCTTACTTGCATGAAGCAATAGAACCAAAAGTGGTCCACAGAGACAT 929
Query 1465 AAAAGCAAGCAATATCCTGATTGATGATGACTTTAATGCAAAGCTTTCCGATTTTGGGTT 1524
||||||||| ||||| ||||||||||||| ||||||||||| || || || ||||||||
Sbjct 930 AAAAGCAAGTAATATATTGATTGATGATGAGTTTAATGCAAAACTCTCTGACTTTGGGTT 989
Query 1525 AGCCAAGCTCTTAGACTCGGGTGAGAGTCACATCACGACCAGAGTCATGGGCACCTTTGG 1584
|||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 990 AGCCAAGCTCTTGGACTCGGGTGAGAGTCACATCACTACCAGAGTCATGGGTACCTTTGG 1049
Query 1585 GTATGTCGCACCCGAATATGCTAATACAGGTCTATTGAATGAGAAGAGTGACATCTATAG 1644
||||| ||||| |||||||||||||||||||| || || || |||||||| || |||||
Sbjct 1050 ATATGTAGCACCAGAATATGCTAATACAGGTCTTTTAAACGAAAAGAGTGATATATATAG 1109
Query 1645 CTTTGGTGTCCTGCTGCTAGA-GACTATAACTGGAAGGGATCCAGTTGACTATGAG-CGT 1702
|||||||||| |||| || || | |||||||||| | ||||||||||| |||| | |||
Sbjct 1110 CTTTGGTGTCTTGCTTCTTGAAG-CTATAACTGGTCGAGATCCAGTTGATTATG-GTCGT 1167
Query 1703 CCAGCTAATGAGGTGAATCTGGTTGAATGGCTAAAGATGATGGTTGGAACAAGAAGAGCT 1762
|| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1168 CCTGCTAATGAGGTGAATCTTGTTGAATGGCTAAAGATGATGGTTGGAACAAGAAGAGCA 1227
Query 1763 GAAGAAGTTGTTGATTCAAGGA-TTGAGCCTCCACCC-GCTACACGTGCTCTGAAACGTG 1820
||||||||||| ||| |||| | |||| ||| ||| | || | ||||| |||||||||
Sbjct 1228 GAAGAAGTTGTGGATCCAAG-ACTTGAACCTAGACCTAG-TAAAAGTGCTTTGAAACGTG 1285
Query 1821 CACTTCTTG-TTGCCCTGAGATGTGTGGATCCTGAAGCACAGAAAAGGCCTAAAATGAGC 1879
|||| |||| || |||| |||||||| |||||||||||| ||||| | |||| ||||||
Sbjct 1286 CACT-CTTGGTTTCCCTTAGATGTGTTGATCCTGAAGCAGAGAAACGTCCTAGAATGAGT 1344
Query 1880 CAGGTTGTGCGGATGCTTGAATCCGATGAACACCCTTTCCGTGAGGAGCGGAGGAACAGA 1939
||||||| ||| ||||||||||| |||||||||||||| | ||||| ||||||||| |
Sbjct 1345 CAGGTTGCGCGCATGCTTGAATCTGATGAACACCCTTTTCACAAGGAGAGGAGGAACA-A 1403
Query 1940 AAA-AGTAGAACAGCGAGTATGGAGATTGTCGAGACCACTGAGGAATC 1986
|| || | ||| ||| | ||||||||||| ||||||| || |||||
Sbjct 1404 AAGGAGCAAAACCGCGGGCATGGAGATTGTTGAGACCAAAGACGAATC 1451
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 119025492195
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5