BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg486413 Length=1189 Score E Sequences producing significant alignments: (Bits) Value AT3G59480.1 | Symbols: | pfkB-like carbohydrate kinase family ... 1783 0.0 > AT3G59480.1 | Symbols: | pfkB-like carbohydrate kinase family protein | chr3:21983021-21984598 FORWARD LENGTH=1221 Length=1221 Score = 1783 bits (965), Expect = 0.0 Identities = 1109/1177 (94%), Gaps = 15/1177 (1%) Strand=Plus/Plus Query 17 Atctctctct-ctctGCTCAATCTTAATCGTCCGATCAAAACACTCCGACTAAAAATGGC 75 |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 28 ATCTCTCTCTATTTTGCTCAATCTTAATCGTCCGATCAAAACACTCCGACTAAAAATGGC 87 Query 76 TGCATCCAACGGTGAGAAAAGCTTGATCGTGAGTTTCGGTGAAATGCTCATCGATTTCGT 135 |||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 88 TGCATCTAACGGCGAGAAAAGCTTGATCGTGAGCTTCGGTGAAATGCTCATCGATTTCGT 147 Query 136 CCCAACTGTCTCCGGCGTATCCCTCGCCGACGCTCCTGGCTTCATCAAAGCCCCTGGTGG 195 |||||| |||||||| |||||||||||||| ||||||||||||||||||||||| ||||| Sbjct 148 CCCAACCGTCTCCGGTGTATCCCTCGCCGATGCTCCTGGCTTCATCAAAGCCCCCGGTGG 207 Query 196 TGCACCTGCCAACGTTGCTATCGCCATATCCCGTCTTGGCGGTCGTGCCGCTTTCGTCGG 255 |||||||||||||||||| |||||||| |||||||| |||||||||||||||||||| || Sbjct 208 TGCACCTGCCAACGTTGCCATCGCCATTTCCCGTCTAGGCGGTCGTGCCGCTTTCGTTGG 267 Query 256 AAAACTTGGTGATGACGAGTTCGGTCACATGCTCGCCGGAATCTTGAAACAGAACGGCGT 315 |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 268 AAAACTCGGTGACGACGAGTTCGGTCACATGCTCGCCGGAATCTTGAAACAGAACGGTGT 327 Query 316 CTCTGCCGAAGGTATCAATTTCGACACCGGAGCCAGGACTGCACTTGCGTTCGTGACACT 375 |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 328 CTCTGCTGAAGGTATCAATTTCGACACTGGAGCCAGGACTGCACTTGCGTTCGTGACACT 387 Query 376 AAAATCTGACGGAGAACGTGAGTTCATGTTCTACCGGAACCCTAGTGCCGATATGCTCCT 435 || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 388 AAGATCTGATGGAGAACGTGAGTTCATGTTCTACCGGAACCCTAGTGCCGATATGCTCCT 447 Query 436 CCGTCCCGACGAACTCAATCTTGATCTCATCAGATCTGCTAAGGTGTTCCACTACGGATC 495 |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 448 CCGTCCCGACGAGCTCAATCTTGATGTCATCAGATCTGCTAAGGTGTTCCACTACGGATC 507 Query 496 CATAAGCTTGATCGTTGAGCCATGTCGATCTGCTCACCTGAAAGCCATGGAGGTGGCTAA 555 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 508 CATAAGCTTGATCGTTGAGCCATGTCGATCTGCTCACTTGAAAGCCATGGAGGTGGCTAA 567 Query 556 AGAAGCTGGTGCGTTGCTCTCTTATGATCCGAACTTGAGGCTTCCTTTGTGGCCCTCCAA 615 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| || Sbjct 568 GGAAGCTGGTGCGTTGCTTTCATATGATCCGAACTTGAGGCTTCCTTTGTGGCCCTCGAA 627 Query 616 GGAGGAGGCTCAGAAGCAGATTCTTAGCATCTGGGACAAAGCTGAAGTGATCAAAGTCAG 675 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 628 GGAGGAGGCTCAGAAGCAGATTCTTAGCATCTGGGACAAAGCTGAAGTGATCAAAGTCAG 687 Query 676 CGATGAAGAGCTTATGTTCTTGACTGGATCTGATAAGGTTGATGACGAGACTGCTTTGTC 735 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 688 CGATGAAGAGCTTATGTTCTTGACTGGATCTGATAAGGTTGATGATGAGACTGCTTTGTC 747 Query 736 TCTGTGGCACTCTAATCTGAAACTTCTTTTGGTCACTCTAGGTGATAAGGGTTGTAGATA 795 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct 748 TCTGTGGCACTCTAATCTGAAACTTCTCTTGGTCACTCTAGGTGAAAAGGGTTGTAGATA 807 Query 796 CTACACAAAGAGCTTCCGTGGATCTGTTGATCCTTTCCATGTGAACGCAGTGGATACAAC 855 |||||| |||||||||||||||||||||||||| ||||||||| | ||||| |||||||| Sbjct 808 CTACACCAAGAGCTTCCGTGGATCTGTTGATCCCTTCCATGTGGATGCAGTAGATACAAC 867 Query 856 AGGTGCTGGTGATTCATATGTTGGTGCCTTGCTTTGCAAGATTGTTGATGACCGTGCTGT 915 |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct 868 TGGTGCTGGTGATTCATTTGTTGGTGCATTGCTTTGCAAGATTGTTGATGACCGTGCTGT 927 Query 916 GCTTGAGGACGAAGCTCGTCTGAGAGAAGTGCTTAGG-TATGCAAATGCTTGTGGAGCCA 974 |||||||||||||||||| |||||||||||||||||| | ||| |||||||||||||||| Sbjct 928 GCTTGAGGACGAAGCTCGGCTGAGAGAAGTGCTTAGGCT-TGCGAATGCTTGTGGAGCCA 986 Query 975 TCACAACAACAAAGAAAGGAGCAATTCCAGCTCTCCCTACAGAGTCTGAAGTTCAGAGTC 1034 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct 987 TCACAACAACAAAGAAAGGAGCTATTCCAGCTCTCCCTACAGAGTCTGAAGTTCAGAGCC 1046 Query 1035 TCCTGAAAGGAAACTGATTAGCA-AATTGTCTGGATTTTTAGGATTTCACGTTTTAGTTT 1093 ||||||||||||||||||| || ||| |||||||||||||||| |||| |||||| || Sbjct 1047 TCCTGAAAGGAAACTGATTT-CACAAT-GTCTGGATTTTTAGGACTTCAAGTTTTACCTT 1104 Query 1094 CTTTGTTGGCtttttttttt-tGTTTCTTCTGCTTTTCGCTCTGTGTTCTTGTACCAGAG 1152 || |||||||| |||||| | |||| |||||||| |||||||||||||||| || Sbjct 1105 -TTC-TTGGCTTTGTTTTTTAT-TTTCCCCTGCTTTTGGCTCTGTGTTCTTGTA---GA- 1157 Query 1153 AACCGTTCTATTCTATTATGAATCTCGTTTTATTCCA 1189 | |||||||||||| |||||||||||||||||||||| Sbjct 1158 A-CCGTTCTATTCTGTTATGAATCTCGTTTTATTCCA 1193 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 58383233835 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5