BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486423
Length=2468
Score E
Sequences producing significant alignments: (Bits) Value
AT3G59570.1 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfami... 3476 0.0
AT2G43490.1 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfami... 1461 0.0
> AT3G59570.1 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily
protein | chr3:22000832-22006056 REVERSE LENGTH=2631
Length=2631
Score = 3476 bits (1882), Expect = 0.0
Identities = 2334/2537 (92%), Gaps = 91/2537 (4%)
Strand=Plus/Plus
Query 1 AAATTGACTAATTGAAATGTCAACCTAAATTAAAAAGATAAACTTTGGCG-aa-a-a-aa 56
|||||||||||||||||||||||||||||||||||||| ||||||| ||| || | | ||
Sbjct 1 AAATTGACTAATTGAAATGTCAACCTAAATTAAAAAGAGAAACTTTTGCGAAACACAGAA 60
Query 57 aaaG-G-CAG-GAGAAAA-G-A---A--GA-AGA--AA--GACTTTCCCTGGG-AGGAAA 100
|||| | || ||||||| | | | || | | || ||||||||||||| || |||
Sbjct 61 AAAGAGAAAGAGAGAAAAGGCAGGCAGGGATAAATCAACGGACTTTCCCTGGGAAGAAAA 120
Query 101 GATGTTCACCGGAGAAGAATGTCCTCCATGATCATCTACAGGTTCTCCAGGTTTCTTTGC 160
|||||||||||||||||||||||||||||||| | | | |||| ||||||||| | |
Sbjct 121 AATGTTCACCGGAGAAGAATGTCCTCCATGATC-T-T-C---TTCTACAGGTTTCTGTAC 174
Query 161 TGCTTTTGGGCTG-TGTTGAGAACGGATGATTCCTTTTCTCAAGGAAGAATTGGGAATTG 219
||||||||||||| | |||||||||||||||||| ||| | |||||| || |||||||||
Sbjct 175 TGCTTTTGGGCTGCT-TTGAGAACGGATGATTCCGTTTGTGAAGGAACAAGTGGGAATTG 233
Query 220 GGGAGGGGGGAGGCTTGgtgtgtgtgtgtgtTTTGATTACTGATGTTTTCTGGTGGAGAG 279
|||| |||||| ||||||| | |||||||||||||||||||||||||||| |||||||
Sbjct 234 GGGA---GGGAGGGTTGGTGT-T-TGTGTGTTTTGATTACTGATGTTTTCTGCTGGAGAG 288
Query 280 GGAAAGAAATGGACTTGTGGGAAACCTGGTCTTGTAAGTCTACAAAAAGTGGTGGCATCT 339
||||||||||||||| || ||||| ||||||||||||||||||||||| |||||||||
Sbjct 289 GGAAAGAAATGGACTCGTCGGAAAGCTGGTCTTGTAAGTCTACAAAAA---GTGGCATCT 345
Query 340 TTGCTTCGGGATCTGAGCCAGCCTTGTCTTTCACAATCTGGGATTCAAGTTGTTTTAACT 399
||| ||||||||||||| |||||||||||||||||||| | || ||||||||||| |||
Sbjct 346 TTGGTTCGGGATCTGAGAGAGCCTTGTCTTTCACAATCTCGCATACAAGTTGTTTTGACT 405
Query 400 ATCGGCAAAATGCTTAAGCCTGAGAAATGGCAGGCTTTTTTCGATTGCGATGGAAAGGTT 459
|| ||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||
Sbjct 406 ATTGGCAAAATGCTTAAGCCTGAGAAGTGGCAGGCTTTATTCGATGGCGATGGAAAGGTT 465
Query 460 TCTGGTTTCCACAAGGCGCTCAAATTAATTATTTTGGGGGGAATCGACCCATCTATAAGA 519
|| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 466 TCCAGTTTCCACAAGGCGCTCAAATTAATTATTTTGGGGGGAATCGATCCATCCATAAGA 525
Query 520 GCTGAAGTTTGGGAATTTCTCCTTGGCTGTTATGCATTGGGCAGCACCTCTGAGTATCGT 579
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 526 GCTGAAGTTTGGGAATTTCTCCTTGGCTGTTATGCATTAAGCAGCACCTCTGAGTATCGT 585
Query 580 AGGCAACTCAGGGTAGCTCGAAGAGAACGATACAATGAGCTGCTCAAGCAATGCCAGATG 639
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 586 ACGCAACTCAGGGTAGCTCGAAGAGAACGATACAATGAGCTGCTCAAGCAATGCCAGATG 645
Query 640 ATGCATTCTAGTGTGGGAACTGGTTCACTTGCCTATGTTGTGGGATCTAAAGTTATGGAT 699
|||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 646 ATGCATTCGACTGTGGGAACTGGTTCACTTGCCTATGTTGTCGGATCTAAAGTTATGGAT 705
Query 700 ATGCGAAAATCATACAAAAATGAGGTTGTAAAGGAAGCTATAGATGAAGGCAGAGAAGCT 759
|||||||||||||||||||||||||| |||||||| | |||||||||| || | ||||||
Sbjct 706 ATGCGAAAATCATACAAAAATGAGGTAGTAAAGGAGGATATAGATGAAAGCCGGGAAGCT 765
Query 760 TGTTTAGATGGTAATGAGAACACTGA-AGATCACCGTGATTGGAGTAATAATGACAC-CA 817
||||||||||| ||||||||||||| | ||||| ||||||||||||||||||| || |
Sbjct 766 TGTTTAGATGGGCATGAGAACACTGACA-ATCACGGTGATTGGAGTAATAATGATACTGA 824
Query 818 ACAAATCTCCTGTGCACAGAAGGGGAAGCTCCAGTGAGTCAGTTGACCTAGTAAGTCCTG 877
| ||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 825 A-AAATCTCCTGTGCGCAGAAGTGGAAGCTCCAGTGAGTCAGTTGACCTAGTCAGTCCTG 883
Query 878 ATAGCACAGTATATGAAACTTCTCCTTTTGTACCTGCGTCCAGTCCATATGGCTTTCCTT 937
|||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 884 ATAGCACAATATATGAAACTTCTTCTTTTGTACCCCCGTCCAGTCCATATGGCTTTCCTT 943
Query 938 CCCCTGGTCCATTTGCAGATGATATCTTTGACTTTCCCTCTCTACCGGTTACAGATTTGT 997
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 944 CCCCTGGTCCATTTGCAGATGATATCTTTGACTTTCCCTCTCTACCGGTCACAGATTTGT 1003
Query 998 TTGGGAGGAGTAGTTTAGGCAAGAAAGGGA-TTTCTACTCCAGATGAAGAAACTTCAACG 1056
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct 1004 TTGGGAGGAGTAGTTTAGGCAAGAAA-GGACTTTCTACTCCAGATGAAGAAACTTCAACG 1062
Query 1057 CATAGTGACTTAAGATCGGAGGATGAGAGAATGCACAGTTTTCGAATTTACAATAATGCA 1116
|| ||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct 1063 CAAAGTGATTTAAGATCGGAGGATGAGAGAATGCACAGTTTTCGAATTGACAAGAATGCA 1122
Query 1117 GATTTAGTTATAGAACCGCATGGG---TCTTCT-A--A--TAA------C----AA--C- 1155
|||||||||||||||||||||||| |||| | | | ||| | || |
Sbjct 1123 GATTTAGTTATAGAACCGCATGGGTCTTCTTATAATGATGTAACTGCTTCTATTAACTCA 1182
Query 1156 G----T-AA-CTGTACATCATGAATCTGTTGAAAAGTTGTCTCATTCTGGCTGCACGTCA 1209
| | || |||||||| | ||||||||||||||||||||||||||| ||||||||||
Sbjct 1183 GAAATTGAAGTTGTACATCTTCAATCTGTTGAAAAGTTGTCTCATTCTGTCTGCACGTCA 1242
Query 1210 GAGATTGTTGATGGTTTGAGAATATCAGATGTCCCTGAAACGCCGTCGGCAAGTGAGACT 1269
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1243 GAGATTGTTGATGGTTTGAGAATATCAGATGTCCCTGAAACGCCGTCGGCAAGGGAGACT 1302
Query 1270 CCTACTCGAGGTGGGTCTGTAAAGAAAGATCGAGTGTCTGAATGGCTTTGGACATTGCAC 1329
| |||||| |||||| |||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 1303 CATACTCGTGGTGGGACTGTAAAGGAAGATCGAGTCTCTGAATGGCTTTGGACATTGCAC 1362
Query 1330 CGAATAGTTGTTGACGTGGTAAGGACAGATAGCCACCTTGAGTTCTACGAGGATCCAGGA 1389
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1363 CGGATAGTTGTTGACGTGGTAAGGACAGATAGCCACCTTGAGTTCTATGAGGATCCAGGA 1422
Query 1390 AATCTAGGAAGAATGTCAGATATCCTTGCGGTCTATGCTTGGGTTGATCCTGCAACTGGT 1449
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1423 AATCTAGGTAGAATGTCAGATATCCTTGCGGTCTATGCTTGGGTTGATCCTGCAACTGGT 1482
Query 1450 TATTGCCAAGGAATGAGCGATTTAGTGTCTCCATTTGTGTTTCTTTTTGAAGATAATGCT 1509
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1483 TATTGCCAAGGAATGAGCGATTTAGTGTCTCCATTTGTATTTCTTTTTGAAGATAATGCT 1542
Query 1510 GACGCCTTTTGGTGTTTTGAAATGCTCATAAGAAGAACGCGTGCAAATTTCCAGATGGAG 1569
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1543 GACGCCTTTTGGTGCTTTGAAATGCTCATAAGAAGAACGCGTGCTAATTTCCAGATGGAG 1602
Query 1570 GGACCAACTGGAGTGATGGATCAATTGCAATCACTGTGGCGTATATTGCAACTCACAGAT 1629
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1603 GGACCAACTGGAGTAATGGATCAATTGCAATCACTATGGCGTATATTGCAACTCACAGAT 1662
Query 1630 AAAGAAATGTTTTCACACCTATCACGTATTGGTGCTGAGAGCCTTCACTTTGCGTTCCGG 1689
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1663 AAAGAAATGTTTTCACACCTATCACGTATTGGTGCTGAAAGCCTTCACTTTGCGTTCCGG 1722
Query 1690 ATGCTGTTAGTGTTGTTTCGACGAGAGTTGTCTTTTAACGAGGCTCTAAGGATGTGGGAG 1749
||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct 1723 ATGCTGTTAGTGTTGTTTCGACGAGAGTTGTCTTTTAACAAGGCTCTGAGGATGTGGGAG 1782
Query 1750 ATGATGTGGGCTGCTGATTTTGATGAGTCTTTTGCTGAAACTTTAGAGAAGGATTGCTTG 1809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1783 ATGATGTGGGCTGCTGATTTTGATGAGTCTTTTGCTGAAACTTTAGAGAAGGATTGCTTG 1842
Query 1810 AAGCCGTTGGTTGTTCAGCTTCCAAAACGATCTGGAGTTGATATGGGGGACCATAAAATA 1869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1843 AAGCCGTTGGTTGTTCAGCTTCCAAAACGATCTGGAGTTGATATGGGGGACCATAAAATA 1902
Query 1870 GATGATGGAAATGGCACTACTACAAATTGTGAACCAACTTCGAAGAGCGACCGAACTTCA 1929
||||||||||||||||| ||||||||| ||||| ||||||| ||||||||||| ||||||
Sbjct 1903 GATGATGGAAATGGCACAACTACAAATAGTGAATCAACTTCAAAGAGCGACCGGACTTCA 1962
Query 1930 AAGTGCAGTCTGTTGTCCAAGAGCGGTCTACTGCCAGAAAGTGGTCCATTGCCAAAAACT 1989
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1963 AAGAGCAGTCTGTTGTCCAAGAGCGGTCTACTGCCAGAAAGTGGTCCATTGCCAAAAACT 2022
Query 1990 GGTCCGCTGTCTGATGATACTGGGATGAAGCCAGCAGTTTCATCCTGTGGGAAAGGAGAT 2049
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2023 GGTCCGCTGTCTGATGATTTTGGGATGAAGCCAGCAGTTTCATCCTGTGGGAAAGGAGAT 2082
Query 2050 GACCCTCTTCCAGTCTTTTGTGTGGCAGCTATTCTAATCATGAATCGGCATAAGATCATG 2109
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 2083 GACCCTCTTCCAGTCTTTTGTGTGGCGGCTATTCTAATCATGAATCGGCATAAAATCATG 2142
Query 2110 AAAGAAACTCACTCGATTGATGACATGATAAAGATTTTTAATGACAAGCTGCTTGCAATT 2169
|||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2143 AAAGAAACTCGCTCGATCGATGACATGATAAAGATTTGTAATGACAAGCTGCTTGCAATT 2202
Query 2170 AGAGTGAGAAGATGCATACGTACAGCCATAAAACTTCGTAAGAAATACTTGTACAAGAAT 2229
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2203 AGAGTGAGAAGATGCATACGCACAGCCATAAAACTTCGTAAGAAATACTTGTACAAGAAT 2262
Query 2230 CAGGTAATCAAGATTGAGAGCCACACTCTA-TCTCAGAATCATAAACAGCATCAGATACA 2288
||||||||||||||||||||||||| || | ||||||||||||||||| ||| |||||||
Sbjct 2263 CAGGTAATCAAGATTGAGAGCCACATTC-AGTCTCAGAATCATAAACACCATGAGATACA 2321
Query 2289 GAATCAAACCGCGATGGAGAACCAAATCCTAGAGGAGATT-CAAAGACATGATGAGAACT 2347
||||||||||||||||||||||||||||| ||| |||||| ||| | |||||||||||||
Sbjct 2322 GAATCAAACCGCGATGGAGAACCAAATCCCAGAAGAGATTACAA-GTCATGATGAGAACT 2380
Query 2348 GTAGCCAAAGGCCAAGTTTATGCA--G-TA--GTCATGTCCCTTAGAGAATGATGA--G- 2399
|||||||||| ||||||||||||| | | |||||| ||||||||||||||||| |
Sbjct 2381 GTAGCCAAAGACCAAGTTTATGCAATGGTCCTGTCATGCCCCTTAGAGAATGATGACTGA 2440
Query 2400 T-A-T--GATAGATTCCACCAATAATTGT-TAACT-TTCTTTCTAGATTTT--TAGTCTG 2451
| | | ||||||||||||| |||||| | ||| | || ||||||||||| |||||||
Sbjct 2441 TGAGTACGATAGATTCCACCTATAATT-TATAA-TATTATTTCTAGATTTCCATAGTCTG 2498
Query 2452 CTAAAATATACAAAAGA 2468
|||| ||||||||||||
Sbjct 2499 CTAAGATATACAAAAGA 2515
> AT2G43490.1 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily
protein | chr2:18054411-18058751 REVERSE LENGTH=2852
Length=2852
Score = 1461 bits (791), Expect = 0.0
Identities = 1503/1832 (82%), Gaps = 107/1832 (6%)
Strand=Plus/Plus
Query 258 ACTGATGTTTTCTGGTGGAGAGGGAAAGA-AATGGA-CTTGTGGGAAACCTGGTCTTGTA 315
|||||||| |||||||||||| ||||| | |||||| | ||||| ||| | ||| | ||
Sbjct 126 ACTGATGTGTTCTGGTGGAGAAGGAAA-ACAATGGAGC-TGTGGAAAAGCGGGTGTAGTG 183
Query 316 AGTCTACAAAAAGTGGTGGCATCTTTGCTTCGGGATCTGAGCCAGCCTTGTCTTTCACAA 375
||| | || ||||| ||| ||||||| |||| ||| ||||| ||||||||||||||||
Sbjct 184 AGTTTGCAGAAAGT--TGG-ATCTTTGGTTCGAGATTTGAGCGAGCCTTGTCTTTCACAG 240
Query 376 TCTGGGATTCAAGTTGTTTTAACTATCGGCAAAATGCTTAAGCCTGAGAAATGGCAGGC- 434
|| |||| || |||||| ||||||||||||||||||||||||| ||||| ||||| ||
Sbjct 241 TCACGGATACAGGTTGTTATAACTATCGGCAAAATGCTTAAGCCAGAGAAGTGGCAAGCG 300
Query 435 TTTTTTCGATTGCGATGGAAAG-GTTTCTGGTTTCCACAAGGCGCTCAAATTAATTATTT 493
| |||| ||| |||| || ||| |||||||||||||| |||||||| |||||||||||||
Sbjct 301 TCTTTT-GATAGCGACGG-AAGAGTTTCTGGTTTCCAGAAGGCGCTTAAATTAATTATTT 358
Query 494 TGGGGGGAATCGACCCATCTATAAGAGCTGAAGTTTGGGAATTTCTCCTTGGCTGTTATG 553
| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 359 TAGGGGGAATCGACCCATCTATTAGAGCTGAAGTTTGGGAATTTCTCCTTGGTTGTTATG 418
Query 554 CATTGGGCAGCACCTCTGAGTATCGTAGGCAACTCAGGGTAGCTCGAAGAGAA-CGATAC 612
| ||| |||||||||||||||| |||| |||||||||||||||||||| ||| ||||||
Sbjct 419 CGTTGAGCAGCACCTCTGAGTACCGTAATCAACTCAGGGTAGCTCGAAG-GAAGCGATAC 477
Query 613 AATGAGCTGCTCAAGCAATGCCAGATGATGCATTCTAGTGTGGGAACTGGTTCACTTGCC 672
||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 478 AATGATTTGCTCAAGCAATGCCAGACGATGCATTCAAGTGTGGGAACTGGTTCACTTGCC 537
Query 673 TATGTTGTGGGATCTAAAGTTATGGATATGCGAAAATCATACAAAAATGAGGTTGTAAAG 732
|||||||||||||||||||||||||||||||| ||||| || | | |||||| ||||||
Sbjct 538 TATGTTGTGGGATCTAAAGTTATGGATATGCGGAAATCTTATAGAGATGAGGCAGTAAAG 597
Query 733 GAAGCTA-T--AGATGAAGGCAGAG-A-A-GCTTGTT-TAGATGGTAATG---A-G--AA 779
| |||| | ||||||| ||||| | | |||| || ||||| ||||| | | ||
Sbjct 598 GTTGCTACTACAGATGAAAACAGAGAAGATGCTT-TTATAGATAATAATGATAATGCTAA 656
Query 780 CACTGAAGATCA-C-C-GTGATTGGAGTAATAATGACACCAACAAATCTCCTGTGCACAG 836
|||||| |||| | | |||||||||||||||||| || | | ||||| | | |||||
Sbjct 657 TACTGAAAATCATCACAGTGATTGGAGTAATAATGGTACTGATACATCTCATTTACACAG 716
Query 837 AAGGGGAAGCTCCAGTGAGTCAGTTGACCTAGTAAGT---CCTGATAG--C--ACA--GT 887
||||||||| || |||||||||||||| |||||||| || || | | | ||
Sbjct 717 AAGGGGAAGTTCTAGTGAGTCAGTTGATTTAGTAAGTGGAAGAGAAAGTCCGGAGAGCGT 776
Query 888 A-TAT-GAA-ACTT-CTCCTTTTGTACCTGCGTCCAGTCCATATGGCTTTCCTTCCCCTG 943
| ||| || |||| |||| |||||| |||| || ||||| ||||||| | ||||||||
Sbjct 777 AGTATACAACACTTCCTCC-TTTGTATCTGCCTCTAGTCCTTATGGCTATGCTTCCCCT- 834
Query 944 GTCCATTTGCAGATGATATCTTTGACTTTCCCTCTCTACCGGTTACAGATTTGTTTGGGA 1003
| | | | | ||| || ||||||||||| |||||||||||||||||||||||||
Sbjct 835 G---A----C-G--GTTAT-TTCGACTTTCCCTCGCTACCGGTTACAGATTTGTTTGGGA 883
Query 1004 GGAGTAGTTTAGGCAAGAAAG-GGATTTCTACTCCAGATGAAGAAACTTCAAC-GCATAG 1061
| | |||||||| |||| | || ||||||| |||||||| || |||| || | | ||
Sbjct 884 GAAATAGTTTAGATAAGATTGAGG-TTTCTACGCCAGATGAGGATGCTTC-ACTGAAAAG 941
Query 1062 TGACTTAAGATCGGAGGATGAGAGAATGCACAGTTTTCGAATTTACAATAATGCAGATTT 1121
||| |||||||| ||||||||| ||||||||| |||||||||| | || ||||| |||||
Sbjct 942 TGAATTAAGATCTGAGGATGAGGGAATGCACAATTTTCGAATTGATAAGAATGCTGATTT 1001
Query 1122 AGTTATAGAACCGCATGGGT-C-TTCTA-ATAACAACGTAACTGTACA-TCATGAATCTG 1177
| ||| ||||| | | ||| | || | | | ||| || | || || || || ||||
Sbjct 1002 AATTAGAGAACAACGTAGGTCCACTCCAGAGATCAAAGTGA-TG--CATTC-GGATTCTG 1057
Query 1178 TT-GAAAAGTTGTCTCATTCTGGCT-GC-ACGTCAGAGATTGTTGATGGTTTGAGAATAT 1234
|| || | | |||| || |||| | || | | |||| || ||||||||| |||||||||
Sbjct 1058 TTGGACCA-TCGTCTTATACTGG-TCGCAATG-CAGAAATAGTTGATGGTCTGAGAATAT 1114
Query 1235 CAGATGTCCCTGAAACGCCGTC-GGCAAGTGAGACT-CCTACTCGAGGTGGGTCTGTAAA 1292
||||||||||||||| | | || | ||| || ||| ||| |||| | |||| ||| |
Sbjct 1115 CAGATGTCCCTGAAATGGCATCAGTAAAG-GACACTCCCT-CTCGTGTTGGGAATGTCAC 1172
Query 1293 GAAAGATCGAGTGTCTGAATGGCTTTGGACATTGCACCGAATAGTTGTTGACGTGGTAAG 1352
| |||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||
Sbjct 1173 GGAAGATCGAGTGTCTGAATGGCTTTGGACTTTGCATCGAATAGTTGTTGATGTGGTAAG 1232
Query 1353 GACAGATAGCCACCTTGAGTTCTACGAGGATCCAGGAAATCTAGGAAGAATGTCAGATAT 1412
||| ||||||||||||||||| || ||||||||||||||||||||||||||||| |||||
Sbjct 1233 GACGGATAGCCACCTTGAGTTTTATGAGGATCCAGGAAATCTAGGAAGAATGTCGGATAT 1292
Query 1413 CCTTGCGGTCTATGCTTGGGTTGATCCTGCAACTGGTTATTGCCAAGGAATGAGCGATTT 1472
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1293 CCTTGCGGTTTATGCTTGGGTTGATCCTGCAACTGGTTATTGCCAAGGAATGAGTGATTT 1352
Query 1473 AGTGTCTCCATTT-GTGTTTCTTTTTGAAGATAATGCTGACGCCTTTTGGTGTTTTGAAA 1531
||| ||||| ||| ||| |||| ||||||||||||||||| ||||| ||||| |||||||
Sbjct 1353 AGTCTCTCC-TTTCGTGGTTCTATTTGAAGATAATGCTGATGCCTTCTGGTGCTTTGAAA 1411
Query 1532 TGCTCATAAGAAGAACGCGTGCAAATTTCCAGATGGAGGGACCAACTGGAGTGATGGATC 1591
|||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||
Sbjct 1412 TGCTCATAAGAAGAACGCGTGCGAATTTCCAAATGGAGGGACCAACTGGGGTGATGGATC 1471
Query 1592 AATTGCAATCACTGTGGCGTATATTGCA-ACTCACAGATAAAGAAATGTTTTCACACCTA 1650
||||||||||| |||||| |||||||| | | ||||||||||| || ||||| ||| ||
Sbjct 1472 AATTGCAATCATTGTGGCACATATTGCAGATT-ACAGATAAAGATATATTTTCCCACTTA 1530
Query 1651 TCACGTATTGGTGCTGAGAGCCTTCACTTTGCGTTCCGGATGCTGTTAGTGT-TGTTTCG 1709
|| |||||||| ||||| || ||||| ||||| ||||||||||| ||||| | |||| ||
Sbjct 1531 TCGCGTATTGGGGCTGAAAGTCTTCATTTTGCCTTCCGGATGCTTTTAGT-TCTGTTCCG 1589
Query 1710 ACGAGAGTTGTCTTTTAACGAGGCTCTAAGGATGTGGGAGATGATGTGGGCTGCTGATTT 1769
||| || |||||||||||||| ||||| ||||||||||||||||||||||| |||||||
Sbjct 1590 ACGGGAATTGTCTTTTAACGAAGCTCTCAGGATGTGGGAGATGATGTGGGCAGCTGATTA 1649
Query 1770 TGATGAGTCTTTTGCTGAAACTTTAGAGAAGGATTGCTTGAAGCCGTTGGTTG-TTCAGC 1828
|||||| ||| || |||||||||| ||||| ||||||||| |||| ||||| | ||||||
Sbjct 1650 TGATGAATCTGTTACTGAAACTTTGGAGAATGATTGCTTGGAGCCTTTGGT-GATTCAGC 1708
Query 1829 TTCCAA-AACGATCTGGAGTTGATATGGGGGACCATAAA--ATAGATGATGGAAATGGCA 1885
|||||| || ||||| | ||| || | || | ||| ||||| ||||||| ||| |
Sbjct 1709 TTCCAAGAAA-ATCTGAACCTGAGGTGAGTGA--AGAAATGATAGAGGATGGAATTGGTA 1765
Query 1886 CTACTACAAATTGTGAACCAAC--TT-CGAAGAGCGA-CCGAACTTCAAAGTGCAG---T 1938
|| |||||| | ||||||| || | ||||||| || || ||||||| |||| |
Sbjct 1766 ATAGTACAAAGAGGGAACCAATGATTTCAAAGAGCGGGCC-AATTTCAAAGAGCAGCGGT 1824
Query 1939 CTGTTGTCCAAG-AGCGGTCTACTGCCAGAA-AGTGGTCCATTGCCAAAAACTG-G--TC 1993
||||||| ||| |||||| | ||||| ||| |||||||| |||||||| |||| | ||
Sbjct 1825 TTGTTGTC-AAGGAGCGGTTTGCTGCC-GAAGAGTGGTCCGTTGCCAAAGACTGCGGGTC 1882
Query 1994 CGCTGTCTGATGATACTGGGATGAAGCCAGCA 2025
| | |||||||| | || ||| ||| |||||
Sbjct 1883 CTTTCTCTGATGAGAGTGAGATAAAGTCAGCA 1914
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 122457507863
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5