BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486435
Length=1984
Score E
Sequences producing significant alignments: (Bits) Value
AT3G59690.1 | Symbols: IQD13 | IQ-domain 13 | chr3:22048754-220... 3009 0.0
AT3G59695.1 | Symbols: | other RNA | chr3:22049730-22051595 RE... 1081 0.0
AT2G43680.1 | Symbols: IQD14 | IQ-domain 14 | chr2:18108349-181... 265 1e-69
> AT3G59690.1 | Symbols: IQD13 | IQ-domain 13 | chr3:22048754-22051673
FORWARD LENGTH=2006
Length=2006
Score = 3009 bits (1629), Expect = 0.0
Identities = 1887/2007 (94%), Gaps = 35/2007 (2%)
Strand=Plus/Plus
Query 1 CaagaagaagaagaagaaagCAAATTAATAGAC-AATAAtctttcttctctggttgcttc 59
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 11 CAACAAGAAGAAGAAGAAAGCAAATTAATAGACAAATAATCTTTCTTCTCTGGTTGCTTC 70
Query 60 tttttatttctttctctggaaacagcttttctctgttactttACTTCTTTCAGAAACCCC 119
||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||
Sbjct 71 TTTTTATTTCTTTCTCTGG-AACAGCTTTTCTCTGTTACTTTACTTCTTTGAGAAACTCC 129
Query 120 ATAATCAAAGAGAAGTTTTTGTGGTTGAAGCTGTTCCTCCTTGGTAAAACAGAGCAATTA 179
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 130 ATAATCAAAGAGGAGTTTTTGAGGTTGAAGCTGTTCCTCCTTGGTAAAACAGAGCAATTA 189
Query 180 TGCTAATTTGCGCCGTCTTTCCAAATCTTAACCTTTATCAAACTCACCATTGAAAGTAAT 239
|||||| ||||||||||||| |||||||| ||| | |||||| ||| ||||||||| |||
Sbjct 190 TGCTAACTTGCGCCGTCTTTTCAAATCTTGACCATCATCAAAATCATCATTGAAAGGAAT 249
Query 240 GTTCGAGAAATGGGCAAGAAAGGAAATTGGTTTTCTGCAATCAAAAGGGTTTTCACACCA 299
|||| ||||||||| |||||||||| |||||||||||||||||||||||| |||||||||
Sbjct 250 GTTCAAGAAATGGGGAAGAAAGGAAGTTGGTTTTCTGCAATCAAAAGGGTGTTCACACCA 309
Query 300 CATTCCaaagagaagcagctaagcaacaacaaccaagaaccagagagaaagagtgaaaac 359
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 310 CATTCCAAAGAGAAGCAGCTAAGCAACAACAACCAAGAACCAGAGATAAAGAGTGAAAAC 369
Query 360 aaagagaagaagaagaaaggttttggaaa-aaagctaaggaatggagaaaCCAATTCATT 418
||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct 370 AAAGAAAAGAAGAAGAAAGGTTTTGGAAAGAAA-CTAAGGAATGGAGAAACCAATTCATT 428
Query 419 TCTTCCCATTTTTAGACAGCCTAGTAGTATCGAAAAGATCTTGTGTGAAGCTGAACGAGA 478
|||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct 429 TCTTCCCATTTTTAGACAGCCTAGTAGTATCGAAAAGATCTTGTCTGAAGCCGAACGAGA 488
Query 479 GCATAACCTTGTCTTTAGGCCACCAAGTCCCACGGATCGAACAAAGGCATCATCAACCTC 538
|||||||||||||||||||||||||| |||||| |||||| |||| |||||||||||||
Sbjct 489 GCATAACCTTGTCTTTAGGCCACCAACTCCCACTGATCGAGCAAATTCATCATCAACCTC 548
Query 539 TGTTCCATCTCCTTC-TGTTAGGCCTGCTTCTCCTAAAGTTCCTTCTCAGAGATATGTCT 597
|||| ||||||| || |||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 549 TGTTGCATCTCC-TCTTGTTAGGCCTGCTTCTCCTAAAGTGCCTTCTCAAAGATATGTCT 607
Query 598 CTTCTCCAAAACCCATTTCACCAAGACTTGCTT---C-C----CC----T-CG-AG-TCC 642
||||||||||||||||||| |||||| |||||| | | || | || || ||
Sbjct 608 CTTCTCCAAAACCCATTTCCCCAAGAGTTGCTTACCCTCAAGTCCATTATCCGAAGCCCC 667
Query 643 CTTCTCCGAAGCCGCCTTCTCCACGAGCGGTTTCGCCTAAGATTGTGCTA-CAACGTGAG 701
||||||| ||||||||||||||| ||||||||||||||| |||||||| | | |||||||
Sbjct 668 CTTCTCCAAAGCCGCCTTCTCCAAGAGCGGTTTCGCCTAGGATTGTGC-AGCGACGTGAG 726
Query 702 TTTGTGCATAGACCAGAGCCAAGTCTACTGGTCAAAAATGCTTATGCAACAAAGATTCAA 761
||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct 727 TTTGTGCATAGACCAGAGCCAAGTCTATTGGTCAAAAATGCTTATGCAATTAAGATTCAA 786
Query 762 GCAGCTTTTAGAGGTTACATGGCAAGGAGGAGTTTCAGAGCTTTGAAAGGTCTAGTCAGG 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 787 GCAGCTTTTAGAGGTTACATGGCAAGGAGGAGTTTCAGAGCTTTGAAAGGTCTAGTCAGG 846
Query 822 CTTCAAGGAGTGGTGAGAGGACACAGCGTGAAGCGTCAAACGATGAATGCTATGAAGTAT 881
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 847 CTTCAAGGAGTGGTAAGAGGACACAGCGTGAAGCGTCAAACGATGAATGCTATGAAGTAT 906
Query 882 ATGCAGCTTTTAGTACGAGTCCAAACACAAGTCCAGTCACGTCGCATCCAAATGCTGGAA 941
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 907 ATGCAGCTTTTAGTCCGAGTCCAAACACAAGTCCAGTCACGTCGCATCCAAATGCTCGAA 966
Query 942 AACCGAGCTAAGAACGACAAAGATGACACGAAATTAGCCTCTAGCCTTGCGTCTGAGGAT 1001
|||||||||| |||||| ||||||||||||||||||| |||||| | | |||||| |||
Sbjct 967 AACCGAGCTAGGAACGATAAAGATGACACGAAATTAGTCTCTAGTCGTATGTCTGACGAT 1026
Query 1002 TGGGACGATAGTGTGCTGACAAAAGAAGAAAAAGATGCGAGGCTGCATAGGAAGATTGAT 1061
||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct 1027 TGGGACGATAGCGTGCTGACAAAAGAAGAAAAAGATGTGAGGCTTCATAGGAAGATTGAT 1086
Query 1062 GCAATGATCAAAAGAGAACGTTCCATGGCCTATGCTTATTCTCACCAGTTATGGAAAAAC 1121
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1087 GCAATGATCAAAAGAGAACGGTCCATGGCCTATGCTTATTCTCACCAGTTATGGAAAAAC 1146
Query 1122 AGTCCAAAGTCTGCTCAGGACATTATAACAAGTGGGTTCCCACTTTGGTGGAACTGGGTG 1181
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1147 AGTCCAAAGTCTGCTCAGGACATTAGAACAAGTGGGTTCCCACTTTGGTGGAACTGGGTG 1206
Query 1182 GACCGGCAGAAGAACCAAAACCAACCATTCAGGCTAACACCAACACGACCGAGCCCAAGC 1241
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||
Sbjct 1207 GACCGGCAGAAGAATCAAAACCAACCGTTCAGGCTAACACCAACACGACCGAGCCTGAGC 1266
Query 1242 CCTCAGCCTCAATCTAGCAGCCAAAACCATTTCAGGCTCAACAACAGTTTCGACACTTCC 1301
||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct 1267 CCTCAGCCTCAATCTAGCAACCAAAACCATTTCAGGCTCAACAACAGTTTCGACACGTCA 1326
Query 1302 ACACCCAATTCATCAAAATCCACATTCGTTACTCCATCTAGACCCATTCACACTCCGCAA 1361
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1327 ACACCCAATTCATCAAAATCCACATTCGTTACTCCATCTAGACCCATTCATACTCCGCAA 1386
Query 1362 CCATACAGTAGCAGCGTCTCAAGATACTCACGAGGAGGAGGAAGAGCCACACAAGATTCT 1421
|||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct 1387 CCATACAGTAGCAGCGTCTCAAGATACTCACGAGGAGGAGGACGAGCTACACAAGATTCT 1446
Query 1422 CCTTTTAAAGATGATGATAGCCTCACAAGCTGCCCTCCATTCTCAGCTCCAAGCTACATG 1481
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1447 CCTTTTAAAGATGATGATAGCCTCACAAGCTGTCCTCCATTCTCAGCTCCAAGCTACATG 1506
Query 1482 GCTCCAACAGTCTCAGCTAAAGCAAAACTAAGAGCAAACAGTAATCTAAAGGAGAGAATG 1541
||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct 1507 GCTCCAACAGTCTCAGCTAAAGCAAAACTAAGAGCAAACAGCAATCCAAAGGAGAGAATG 1566
Query 1542 GACCGTACACCGGTCAGCACAAACGAGAAGAGACGGAGTTCGTTCCCTCTTGGTTCGTTC 1601
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1567 GACCGTACACCGGTCAGCACAAACGAGAAGAGACGAAGTTCGTTCCCTCTTGGTTCGTTC 1626
Query 1602 AAGTGGAACAAAGGGTCATTGTTCATGAGCAGCAACAGTAACAACAAGGGTCCAGGTTCT 1661
|| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1627 AAATGGAACAAAGGGTCATTGTTCATGAGCAACAACAGTAACAACAAGGGTCCAGGTTCT 1686
Query 1662 TCTTCTTCTGGTGCTGTTGTGCTTGAGAAGCACAAAACCCTCAAATCCGTTGGAAATTTG 1721
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1687 TCTTCTTCTGGTGCTGTGGTGCTTGAGAAGCACAAAACCCTCAAATCCGTTGGAAATTTG 1746
Query 1722 AGTATTGATTCTACGGTTTCGATGCCTGCAACAATTGGGAGGAGGGCTTTTAACAGATTT 1781
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1747 AGTATTGATTCTACTGTTTCGATGCCTGCAACAATTGGGAGGAGGGCTTTTAACAGATTT 1806
Query 1782 GCGTGAttt-tttat-tt-tttattttctgaaacgaaaaaa-cttttctttctttctcag 1837
||||||||| ||| | || ||| ||||||| ||||||| || |||| |||| |||
Sbjct 1807 GCGTGATTTGTTTTTCTTCTTT-TTTTCTGT---GAAAAAATCTGACCTTTTTTTCCCAG 1862
Query 1838 ttgattcttctttgatttgtttATCTTACATCAATTTTATGAGTGGTGATTATTTTGAGT 1897
|||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct 1863 TTGATTCTTCATTGATTTGTTTATCTTACATCAATTTTATGAGTGCTGATGATTTTGAGT 1922
Query 1898 GttttttttttGTGTTCTTGATTACGAATTTTACAGATGTAACATAATAATAAAAAGTAA 1957
||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1923 GTTGTTT----GTGTTCTTGATTACGAATTTTACAGATGTAACATAATAAGAAAAAGTAA 1978
Query 1958 ACAACAAAAACAGAGGATTTGGATTGT 1984
|||||||||||||||||||||||||||
Sbjct 1979 ACAACAAAAACAGAGGATTTGGATTGT 2005
> AT3G59695.1 | Symbols: | other RNA | chr3:22049730-22051595
REVERSE LENGTH=1698
Length=1698
Score = 1081 bits (585), Expect = 0.0
Identities = 623/642 (97%), Gaps = 0/642 (0%)
Strand=Plus/Minus
Query 1107 CAGTTATGGAAAAACAGTCCAAAGTCTGCTCAGGACATTATAACAAGTGGGTTCCCACTT 1166
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 719 CAGTTATGGAAAAACAGTCCAAAGTCTGCTCAGGACATTAGAACAAGTGGGTTCCCACTT 660
Query 1167 TGGTGGAACTGGGTGGACCGGCAGAAGAACCAAAACCAACCATTCAGGCTAACACCAACA 1226
||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 659 TGGTGGAACTGGGTGGACCGGCAGAAGAATCAAAACCAACCGTTCAGGCTAACACCAACA 600
Query 1227 CGACCGAGCCCAAGCCCTCAGCCTCAATCTAGCAGCCAAAACCATTTCAGGCTCAACAAC 1286
|||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 599 CGACCGAGCCTGAGCCCTCAGCCTCAATCTAGCAACCAAAACCATTTCAGGCTCAACAAC 540
Query 1287 AGTTTCGACACTTCCACACCCAATTCATCAAAATCCACATTCGTTACTCCATCTAGACCC 1346
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 539 AGTTTCGACACGTCAACACCCAATTCATCAAAATCCACATTCGTTACTCCATCTAGACCC 480
Query 1347 ATTCACACTCCGCAACCATACAGTAGCAGCGTCTCAAGATACTCACGAGGAGGAGGAAGA 1406
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 479 ATTCATACTCCGCAACCATACAGTAGCAGCGTCTCAAGATACTCACGAGGAGGAGGACGA 420
Query 1407 GCCACACAAGATTCTCCTTTTAAAGATGATGATAGCCTCACAAGCTGCCCTCCATTCTCA 1466
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 419 GCTACACAAGATTCTCCTTTTAAAGATGATGATAGCCTCACAAGCTGTCCTCCATTCTCA 360
Query 1467 GCTCCAAGCTACATGGCTCCAACAGTCTCAGCTAAAGCAAAACTAAGAGCAAACAGTAAT 1526
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 359 GCTCCAAGCTACATGGCTCCAACAGTCTCAGCTAAAGCAAAACTAAGAGCAAACAGCAAT 300
Query 1527 CTAAAGGAGAGAATGGACCGTACACCGGTCAGCACAAACGAGAAGAGACGGAGTTCGTTC 1586
| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 299 CCAAAGGAGAGAATGGACCGTACACCGGTCAGCACAAACGAGAAGAGACGAAGTTCGTTC 240
Query 1587 CCTCTTGGTTCGTTCAAGTGGAACAAAGGGTCATTGTTCATGAGCAGCAACAGTAACAAC 1646
||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct 239 CCTCTTGGTTCGTTCAAATGGAACAAAGGGTCATTGTTCATGAGCAACAACAGTAACAAC 180
Query 1647 AAGGGTCCAGGTTCTTCTTCTTCTGGTGCTGTTGTGCTTGAGAAGCACAAAACCCTCAAA 1706
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 179 AAGGGTCCAGGTTCTTCTTCTTCTGGTGCTGTGGTGCTTGAGAAGCACAAAACCCTCAAA 120
Query 1707 TCCGTTGGAAATTTGAGTATTGATTCTACGGTTTCGATGCCT 1748
||||||||||||||||||||||||||||| ||||||||||||
Sbjct 119 TCCGTTGGAAATTTGAGTATTGATTCTACTGTTTCGATGCCT 78
Score = 608 bits (329), Expect = 6e-173
Identities = 426/469 (91%), Gaps = 21/469 (4%)
Strand=Plus/Minus
Query 333 caagaaccagagagaaagagtgaaaacaaagagaagaagaagaaaggttttggaaa-aaa 391
||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 1666 CAAGAACCAGAGATAAAGAGTGAAAACAAAGAAAAGAAGAAGAAAGGTTTTGGAAAGAAA 1607
Query 392 gctaaggaatggagaaaCCAATTCATTTCTTCCCATTTTTAGACAGCCTAGTAGTATCGA 451
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1606 -CTAAGGAATGGAGAAACCAATTCATTTCTTCCCATTTTTAGACAGCCTAGTAGTATCGA 1548
Query 452 AAAGATCTTGTGTGAAGCTGAACGAGAGCATAACCTTGTCTTTAGGCCACCAAGTCCCAC 511
||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct 1547 AAAGATCTTGTCTGAAGCCGAACGAGAGCATAACCTTGTCTTTAGGCCACCAACTCCCAC 1488
Query 512 GGATCGAACAAAGGCATCATCAACCTCTGTTCCATCTCCTTCT-GTTAGGCCTGCTTCTC 570
|||||| |||| ||||||||||||||||| |||||||| || ||||||||||||||||
Sbjct 1487 TGATCGAGCAAATTCATCATCAACCTCTGTTGCATCTCCT-CTTGTTAGGCCTGCTTCTC 1429
Query 571 CTAAAGTTCCTTCTCAGAGATATGTCTCTTCTCCAAAACCCATTTCACCAAGACTTGCTT 630
||||||| |||||||| ||||||||||||||||||||||||||||| |||||| ||||||
Sbjct 1428 CTAAAGTGCCTTCTCAAAGATATGTCTCTTCTCCAAAACCCATTTCCCCAAGAGTTGCTT 1369
Query 631 -CCC-C---TC--------GA-GTCCC-TTCTCCGAAGCCGCCTTCTCCACGAGCGGTTT 675
||| | || || | ||| |||||| ||||||||||||||| |||||||||
Sbjct 1368 ACCCTCAAGTCCATTATCCGAAGCCCCCTTCTCCAAAGCCGCCTTCTCCAAGAGCGGTTT 1309
Query 676 CGCCTAAGATTGTGCTA-CAACGTGAGTTTGTGCATAGACCAGAGCCAAGTCTACTGGTC 734
|||||| |||||||| | | |||||||||||||||||||||||||||||||||| |||||
Sbjct 1308 CGCCTAGGATTGTGC-AGCGACGTGAGTTTGTGCATAGACCAGAGCCAAGTCTATTGGTC 1250
Query 735 AAAAATGCTTATGCAACAAAGATTCAAGCAGCTTTTAGAGGTTACATGG 783
|||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1249 AAAAATGCTTATGCAATTAAGATTCAAGCAGCTTTTAGAGGTTACATGG 1201
Score = 344 bits (186), Expect = 2e-93
Identities = 198/204 (97%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 782 GGCAAGGAGGAGTTTCAGAGCTTTGAAAGGTCTAGTCAGGCTTCAAGGAGTGGTGAGAGG 841
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1113 GGCAAGGAGGAGTTTCAGAGCTTTGAAAGGTCTAGTCAGGCTTCAAGGAGTGGTAAGAGG 1054
Query 842 ACACAGCGTGAAGCGTCAAACGATGAATGCTATGAAGTATATGCAGCTTTTAGTACGAGT 901
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1053 ACACAGCGTGAAGCGTCAAACGATGAATGCTATGAAGTATATGCAGCTTTTAGTCCGAGT 994
Query 902 CCAAACACAAGTCCAGTCACGTCGCATCCAAATGCTGGAAAACCGAGCTAAGAACGACAA 961
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||
Sbjct 993 CCAAACACAAGTCCAGTCACGTCGCATCCAAATGCTCGAAAACCGAGCTAGGAACGATAA 934
Query 962 AGATGACACGAAATTAGCCTCTAG 985
||||||||||||||||| ||||||
Sbjct 933 AGATGACACGAAATTAGTCTCTAG 910
> AT2G43680.1 | Symbols: IQD14 | IQ-domain 14 | chr2:18108349-18111831
FORWARD LENGTH=2505
Length=2505
Score = 265 bits (143), Expect = 1e-69
Identities = 452/594 (76%), Gaps = 50/594 (8%)
Strand=Plus/Plus
Query 1209 TTCAGGCTAACACCAACACGACCGAGCCCAAGCCCTCAGCCTCAATCTAGCAGCCAAAAC 1268
||||||||||||||| || ||| | ||||||| |||| | |||| || |||| ||| ||
Sbjct 1716 TTCAGGCTAACACCATCAAGACTGTGCCCAAGTCCTCTGTCTCAGTCAAGCAAACAACAC 1775
Query 1269 CATTTCAGGCTCAACAA-CAGTTTCGACACTTCCACACCCA-ATTCATCAAAATCCACAT 1326
||| ||||||| |||| || ||| |||||||| ||||||| | || |||| |||||| |
Sbjct 1776 CATATCAGGCTTGACAACCACTTT-GACACTTCAACACCCAGA-TCGTCAAGATCCAC-T 1832
Query 1327 TCGTTACTCCATCTAGACCCATTCACACTCCGCAACCATACAGTAGCAGCGTCTCAAGAT 1386
| || | || || ||| || || || || ||| |||| | | | |||||||
Sbjct 1833 T--TT-C-ACA-CT---CCC--TC-CAGACC-CATCCACACAG--GGA-C--ATCAAGAT 1875
Query 1387 ACTCACGAGGAGGAGGAAGAGCCACACAAGATTCTCCTTTTAAAGATGATGATAGCCTCA 1446
||||| ||||| || ||||| |||||||||||||| || ||||||||||||||||
Sbjct 1876 ACTCAAGAGGAAGACTAAGAG---GTCAAGATTCTCCTTTCAAGGATGATGATAGCCTCA 1932
Query 1447 CAAGCTGCCCTCCATTCTCAGCTCCAAGCTACATGGCTCCAACAGTCTCAGCTAAAGCAA 1506
||||||||||||||||| | || | |||||||||||||||||||||| || |||||||
Sbjct 1933 CAAGCTGCCCTCCATTC-C--CT--A-GCTACATGGCTCCAACAGTCTCTGCCAAAGCAA 1986
Query 1507 AACTAAGAGCAAACAGTAATCTAAAGGAGAGAATGGACCG-TACACCGGTCAGC-ACAA- 1563
|| | ||| ||||||| |||| |||||||||| || | | |||||| |||||| | ||
Sbjct 1987 AAGTTAGACCAAACAGCAATCCAAAGGAGAGAGTG-ATGGGTACACCAGTCAGCGAGAAG 2045
Query 1564 ACGAGAAGAGACGGAGTTCGTTCC-CTCTTGGTTCGTTCA-AGTGGAACAAAGGGTCATT 1621
| ||||| | || | | | || | | | | |||| | | |||||||||||||||||
Sbjct 2046 AGGAGAAT-GTCGTA-TCCCC-CCACGCAAGATACGTTTAGA-TGGAACAAAGGGTCATT 2101
Query 1622 GTTCATGAGCAGCAACAGTAACAACA-AGGGTCCAGGTTCTTCTTCTTCTGGTGCTGTTG 1680
| ||||||||| || ||| | | ||| ||| ||| ||||| | || |||| || |
Sbjct 2102 GGTCATGAGCAACAGCAGCAGCCACAGAGG-TCCTGGTTCA-C--CTGGAGGTG-TGGT- 2155
Query 1681 TGCTTGAGAAGCACAAAACCCTCAAATCCGTTGGAAATTTGAGTATTGATTCTACGGTTT 1740
| |||||||||||||| || || ||||| || ||||||||||| |||| ||| || | |
Sbjct 2156 T-CTTGAGAAGCACAAGACACTTAAATCAGTAGGAAATTTGAGCATTGGTTCCACTGCCT 2214
Query 1741 CGATGCCTGCAACAATTGGGAGGAGGGCTTTTAACAGATTTGCGTGAttt-ttt 1793
| ||| | ||||| ||||||| | || ||||||||||||| ||||||| |||
Sbjct 2215 CCATGGCAACAACAGTTGGGAGAAAGGAATTTAACAGATTTGTGTGATTTCTTT 2268
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 98292667110
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5