BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486453
Length=1398
Score E
Sequences producing significant alignments: (Bits) Value
AT3G59890.1 | Symbols: | Dihydrodipicolinate reductase, bacter... 1892 0.0
AT2G44040.1 | Symbols: | Dihydrodipicolinate reductase, bacter... 1027 0.0
> AT3G59890.1 | Symbols: | Dihydrodipicolinate reductase, bacterial/plant
| chr3:22124242-22126630 REVERSE LENGTH=1444
Length=1444
Score = 1892 bits (1024), Expect = 0.0
Identities = 1247/1352 (92%), Gaps = 26/1352 (2%)
Strand=Plus/Plus
Query 1 ACCAGAAGCTTTGGATCTAACGTAAAGGTG-AAATGTCTAAAACCCTAGCGTTCGCCGGT 59
|||||||||||||||||| ||||||||| | ||||||||||||||||| |||||||||||
Sbjct 1 ACCAGAAGCTTTGGATCTGACGTAAAGG-GAAAATGTCTAAAACCCTACCGTTCGCCGGT 59
Query 60 TCGAATTTTCCAGACAAGGTTTGAACTTAAACTCCGAA-CTCGTT-CTTCTACAGCAAAC 117
||||||||| |||||||||||||||| |||| | | || ||||| | || ||||||| |
Sbjct 60 TCGAATTTTTCAGACAAGGTTTGAACATAAA-TTCTAATTTCGTTGC-TCGACAGCAATC 117
Query 118 TCGGACCAATTGGAAAACAAAAATGGCGGCGAATGGGCTAATGACGGCATCCAATGTGTT 177
||||||||| |||||| | |||||||||||||||||||||||| ||||||| | ||||||
Sbjct 118 TCGGACCAAGTGGAAACCGAAAATGGCGGCGAATGGGCTAATGGCGGCATCTAGTGTGTT 177
Query 178 TCTTCACCGTCCTGAAAATCTCAATTTCTCGTT-TACTTCTAGAACGAATCAAATGGCTC 236
||| |||||||||| | ||| | |||||||||| | ||||||||||||||||||||| ||
Sbjct 178 TCTCCACCGTCCTGTACATCCCCATTTCTCGTTCT-CTTCTAGAACGAATCAAATGGTTC 236
Query 237 CACTCGGCGTCAAAGGCCGTGTTGGTTTCATGGGCAATGTGAAACTCTGTTCGACGGTGG 296
|||||||| |||||||||||||| ||||||| ||||||||||||| ||||| ||||||
Sbjct 237 CACTCGGCTTCAAAGGCCGTGTTAGTTTCATCGGCAATGTGAAACGCTGTTTTCCGGTGG 296
Query 297 TTTTGTCAATGGCAAAGTCGGAGACTTTAGAGGAAGCCGGCAAGTCCGTAGCGCCTGGTA 356
| |||||||||| ||||||||||||||| |||||||| || || ||||| ||||||||||
Sbjct 297 TATTGTCAATGGGAAAGTCGGAGACTTTCGAGGAAGCTGGAAATTCCGTTGCGCCTGGTA 356
Query 357 ACGGCATATCGATCATGGTGAATGGATGCAGTGGCAAAATGGGGAAAGCTGTCATCAAAG 416
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 357 ACGGCATATCGATCATGGTGAATGGATGCAGTGGTAAAATGGGGAAAGCTGTCATCAAAG 416
Query 417 CGGCAGATTCTGCTGGAGTTAATATTGTTCCTACATCATTTGGATCTGTTGAAGAGGCTG 476
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 417 CGGCAGATTCTGCTGGAGTGAATATTGTTCCTACATCATTTGGGTCTGTTGAAGAGGCTG 476
Query 477 GCCAAAGAGTTGAGGTCTGTGGAAAGGAGATTCTTGTTCATGGTCCTACCGAGAGAGAAA 536
|||| | ||||||||||||||||||||||||||||| ||||||||||| || |||||||
Sbjct 477 GCCAGACTGTTGAGGTCTGTGGAAAGGAGATTCTTGTGCATGGTCCTACTGAAAGAGAAA 536
Query 537 AGGTTCTATCTTCGGTGTTTGAGAAGTATCCTGAACTAATTGTTGTGGACTACACAATTC 596
|||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 537 AGGTGCTGTCTTCAGTGTTTGAGAAGTATCCTGAACTAATTGTTGTGGACTACACAATTC 596
Query 597 CCTCTGCAGTAAATGATAATGCAGAGCTGTATGGCAAAGTAGGAGTTCCCTTTGTCATGG 656
||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||
Sbjct 597 CCTCTGCAGTAAATGATAATGCAGAGCTGTATGGCAAAGTAGGAGTTCCGTTCGTAATGG 656
Query 657 GAACAACTGGAGGAGACAGGACAAGGTTGTATAAAACTGTAGAGGAATCAAAGATTTATG 716
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 657 GAACAACTGGAGGAGACAGGACAAGATTGTATAAAACTGTCGAGGAATCAAAGATTTATG 716
Query 717 CTGTGATCTCCCCACAGATGGGTAAACAGGTTGTTGCGTTTCTTGCAGCCATGGAGATCA 776
||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 717 CTGTGATTTCTCCACAGATGGGTAAACAGGTTGTTGCGTTTCTTGCAGCAATGGAGATCA 776
Query 777 TGTCTGAGCAGTTTCCTGGTGCATTTGCTGGTTATTCCTTAGAGGTGATGGAGTCTCATC 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 777 TGTCTGAGCAGTTTCCTGGTGCATTTGCTGGTTATTCCTTAGAGGTGATGGAGTCTCATC 836
Query 837 AAGCTAGCAAATTGGATGCATCTGGAACTGCAAAAGCTGTAATTTCTTGCTTTCAGAAAT 896
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 837 AAGCTAGCAAATTGGATGCATCTGGTACTGCAAAAGCTGTTATTTCTTGCTTTCAGAAAT 896
Query 897 TGGGGGTGTCTTACGACATGGACCAGATACAATTAATTCGAGATCCTAAGCAGCAGATTG 956
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 897 TAGGCGTGTCTTACGACATGGACCAGATACAATTAATTCGAGATCCTAAGCAGCAGATTG 956
Query 957 AGGTGGTGGGTGTTCCGGAGGAGCATGTCTCGGGTCATGCTTTCCATCTTTATCACTTGA 1016
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 957 AGGTGGTGGGTGTTCCAGAGGAGCATGTCTCGGGTCATGCTTTCCATCTTTATCACTTGA 1016
Query 1017 CATCACCAGATAAAACTGTGTCCTTTGAGTTCCAGCACAATGTTTGCGGAAGATCAATAT 1076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1017 CATCACCAGATAAAACTGTGTCCTTTGAGTTCCAGCACAATGTTTGCGGAAGATCAATAT 1076
Query 1077 ATGCTGAGGGTACTGTTGATGCAGTGCTTTTCCTTGCCAAAAAGATCCGGTCTAAAGCAG 1136
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1077 ATGCTGAGGGTACTGTTGATGCAGTGCTATTCCTTGCCAAAAAGATCCGGTCTAAAGCAG 1136
Query 1137 AGAAGCGGATCTATAACATGATTGATGTCTTGAGAGAGGGAAACATGCGTTGAACAAACC 1196
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1137 AGAAGAGGATCTATAACATGATTGATGTCTTGAGAGAGGGAAACATGCGTTGAACAAACC 1196
Query 1197 TGAGACGATTTCCAATTGGA-AGTTTC-A-GAGTGT-T-AAACACTATATAAAAAA-TGT 1250
| | | | | | | || ||| | |||| | | |||| |||||||||||| |||
Sbjct 1197 CCA-A-GCTG-C-AGT-GGCTAGTAAAGAAGAGTATATGAAACTCTATATAAAAAAATGT 1251
Query 1251 G-TGCCAAGTTAA-TGTG-TTGGGGTTCTTCATTTCTTTGTAAGGTTTCGTCTTTT-ATG 1306
||||||||||| |||| || || ||||||||||||||||| ||||| ||||||| |||
Sbjct 1252 CATGCCAAGTTAAATGTGCTTTGG-TTCTTCATTTCTTTGTAGGGTTTTGTCTTTTTATG 1310
Query 1307 GCTTCTCTGTTTCTCTTTCCGAAT--GCAAAA 1336
|||||||||||||||||| || || ||||||
Sbjct 1311 GCTTCTCTGTTTCTCTTTTCGGATTTGCAAAA 1342
> AT2G44040.1 | Symbols: | Dihydrodipicolinate reductase, bacterial/plant
| chr2:18221769-18224104 REVERSE LENGTH=1366
Length=1366
Score = 1027 bits (556), Expect = 0.0
Identities = 825/954 (86%), Gaps = 21/954 (2%)
Strand=Plus/Plus
Query 248 AAAGGCCGTGTTGGTTTCATGGGCAATGTGAAAC-TC-TGTTCGACGGTGGTTTTGT-CA 304
|||||||||||| |||||||||||| || || || || | ||| |||||||||| | ||
Sbjct 206 AAAGGCCGTGTTAGTTTCATGGGCATTGGGACACGTCGTCTTC--CGGTGGTTTTATCCA 263
Query 305 --ATGGCAAAGTCGGA-GACTTTAGAGGAAGCCG-GCAAGTCCGTAGCGCCTGGTAACGG 360
| ||| | | |||| | | ||||| |||| | || || || |||||| || ||
Sbjct 264 TGACGGCGATGGCGGATTCCGGT-GAGGAGGCCGTG-AAATCTGTTTTGCCTGGAAATGG 321
Query 361 CATATCGATCATGGTGAATGGATGCAGTGGCAAAATGGGGAAAGCTGTCATCAAAGCGGC 420
|||||| ||||||||||||||||| ||||||||||||||||||||||| || ||||| ||
Sbjct 322 CATATCCATCATGGTGAATGGATGTAGTGGCAAAATGGGGAAAGCTGTAATTAAAGCAGC 381
Query 421 AGATTCTGCTGGAGTTAATATTGTTCCTACATCATTTGGATCTGTTGAAGAGGCTGGCCA 480
||| ||||| ||||| ||||||||||| | ||| |||||||||| || |||| ||| ||
Sbjct 382 AGACTCTGCAGGAGTAAATATTGTTCCCATATCGTTTGGATCTGCTGGTGAGGATGGTCA 441
Query 481 AAGAGTTGAGGTCTGTGGAAAGGAGATT-CTTGTTCATGGTCCTACCGAGAGAGAAAAGG 539
||||||||||||||||||||||||||| | ||| || ||||| || || ||||||||||
Sbjct 442 GAGAGTTGAGGTCTGTGGAAAGGAGATTAC-TGTGCACGGTCCAACTGAAAGAGAAAAGG 500
Query 540 TTCTATCTTCGGTGTTTGAGAAGTATCCTGAACTAATTGTTGTGGACTACACAATTCCCT 599
|||| |||||||||||||||||| | || || ||||||||||| ||||||||||||||||
Sbjct 501 TTCTTTCTTCGGTGTTTGAGAAGCACCCGGAGCTAATTGTTGTCGACTACACAATTCCCT 560
Query 600 CTGCAGTAAATGATAATGCAGAGCTGTATGGCAAAGTAGGAGTTCCCTTT-GTCATGGGA 658
||||||||||||||||||| ||||||||| |||||||||| ||| ||||| |||||||||
Sbjct 561 CTGCAGTAAATGATAATGCGGAGCTGTATAGCAAAGTAGGTGTT-CCTTTCGTCATGGGA 619
Query 659 ACAACTGGAGGAGACAGG-ACAAGGTTGTATAAAACTGTAGAGGAATCAAAGATTTATGC 717
|||||||| ||||| ||| |||| |||||| ||||||| |||||| |||||||||||||
Sbjct 620 ACAACTGGTGGAGATAGGAACAA-ATTGTATGAAACTGTTGAGGAAGCAAAGATTTATGC 678
Query 718 TGTGATCTCCCCACAGATGGGTAAACAGGTTGTTGCGTTTCTTGCAGCCATGGAGATCAT 777
|||||| || ||||||||||||||||||||||| || |||||||| ||||||||||||||
Sbjct 679 TGTGATTTCTCCACAGATGGGTAAACAGGTTGTAGCATTTCTTGCGGCCATGGAGATCAT 738
Query 778 GTCTGAGCAGTTTCCTGGTGCATTTGCTGGTTATTCCTTAGAGGTGATGGAGTCTCATCA 837
| ||||||||||||| || || ||| ||||||||||||| || |||||||||||||||||
Sbjct 739 GGCTGAGCAGTTTCCGGGAGCCTTTTCTGGTTATTCCTTGGATGTGATGGAGTCTCATCA 798
Query 838 AGCTAGCAAATTGGATGCATCTGGAACTGCAAAAGCTGTAATTTCTTGCTTTCAGAAATT 897
||||||||||||||||||||| ||||| ||||||||||| ||||||||||| ||| ||||
Sbjct 799 AGCTAGCAAATTGGATGCATCCGGAACAGCAAAAGCTGTTATTTCTTGCTTCCAGGAATT 858
Query 898 GGGGGTGTCTTACGACATGGACCAGATACAATTAATTCGAGATCCTAAGCAGCAGATTG- 956
||| ||||||||||||||||| ||||||||||| ||||| ||||| || ||||| | ||
Sbjct 859 GGGTGTGTCTTACGACATGGATCAGATACAATTGATTCGGGATCCAAAACAGCA-AGTGG 917
Query 957 AGGTGGTGGGTGTTCCGGAGGAGCATGTCTCGGGTCATGCTTTCCATCTTTATCACTTGA 1016
|| |||||||||| || ||||||||| |||| ||||| ||||||||||||||||||||||
Sbjct 918 AGATGGTGGGTGTACCTGAGGAGCATATCTCTGGTCACGCTTTCCATCTTTATCACTTGA 977
Query 1017 CATCACCAGATAAAACTGTGTCCTTTGAGTTCCAGCACAATGTTTGCGGAAGATCAATAT 1076
||||||| ||| ||||||| ||||| ||||||||||||||||| ||||| ||||||| |
Sbjct 978 CATCACCCGATGAAACTGTCTCCTTCGAGTTCCAGCACAATGTCTGCGGCCGATCAATTT 1037
Query 1077 ATGCTGAGGGTACTGTTGATGCAGTGCTTTTCCTTGCCAAAAAGATCCGGTCT-AAAGCA 1135
|||||||||||||||||||||| ||||| ||||| ||||||||||| || | | ||||||
Sbjct 1038 ATGCTGAGGGTACTGTTGATGCCGTGCTCTTCCTCGCCAAAAAGATTCGAT-TGAAAGCA 1096
Query 1136 GAGAAGCGGATCTATAACATGATTGATGTCTTGAGAGAGGGAAACATGCGTTGA 1189
|| |||| ||||| |||||||| |||||||||||||||||||| |||||||||
Sbjct 1097 GATCAGCGAATCTACAACATGATCGATGTCTTGAGAGAGGGAAATATGCGTTGA 1150
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 68875147740
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5