BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486455
Length=2389
Score E
Sequences producing significant alignments: (Bits) Value
AT3G59910.1 | Symbols: | Ankyrin repeat family protein | chr3:... 3489 0.0
AT2G44090.1 | Symbols: | Ankyrin repeat family protein | chr2:... 1428 0.0
> AT3G59910.1 | Symbols: | Ankyrin repeat family protein | chr3:22130483-22133583
REVERSE LENGTH=2480
Length=2480
Score = 3489 bits (1889), Expect = 0.0
Identities = 2245/2405 (93%), Gaps = 71/2405 (3%)
Strand=Plus/Plus
Query 1 CAGGGtttttctcagcctctctttctctttctctctctctctctctctcAATGGAACTCT 60
||||||||||||||||||||||||||| | | ||||||||||| |||||||||||||||
Sbjct 1 CAGGGTTTTTCTCAGCCTCTCTTTCTC--T-T-TCTCTCTCTCTGTCTCAATGGAACTCT 56
Query 61 TGTCCAGGGTTTGTTGTTGATTTCTTATG-CCATGTTCAAGAGATAGTGCGCTTAAAG-G 118
|||||||||||||||||||||||| |||| ||||| ||||||||||||||| || ||| |
Sbjct 57 TGTCCAGGGTTTGTTGTTGATTTCCTATGCCCATGGTCAAGAGATAGTGCG-TTTAAGAG 115
Query 119 AAGGCATCGAGGATTTACGCTTATTAGAAGGAACTGTG--GGTGGATTCTGATAGGGATC 176
||||||||||||||||||||| ||||||| |||||||| |||||||| |||||||||||
Sbjct 116 AAGGCATCGAGGATTTACGCTGATTAGAATGAACTGTGTTGGTGGATTTTGATAGGGATC 175
Query 177 AGTGCTGGGCTTTTGAGTTTCGTCCTTTGATTTTGTAGATTTCGATGCTTCTGCAAGGAT 236
||| | ||| |||||||||| | |||||| ||||||||||||||||| |||||||||
Sbjct 176 AGTTCCGGG-TTTTGAGTTTTGGCCTTTGGTTTTGTAGATTTCGATG---ATGCAAGGAT 231
Query 237 TGGATTTGCTATACAGTAT-TTT-GTTTAGTGGTCTCTTGTCCGGATAGCTTTTGGATGA 294
||||||||||||| | | | ||| || | ||||||| |||| ||||||||||||||||||
Sbjct 232 TGGATTTGCTATATACTTTGTTTAGTGT-GTGGTCTGTTGTGCGGATAGCTTTTGGATGA 290
Query 295 ATAA----T-T-T--TTC------GAGTTTGATTTGGAGAGTTAC-GATTTAAGAAGGAT 339
|||| | | | ||| ||||||||||||| ||| || || || | ||||||
Sbjct 291 ATAAGCTTTGTGTGCTTCTTTTTTTAGTTTGATTTGGAAAGTCACAGACTTGACAAGGAT 350
Query 340 GGAGAAAGAAGGTGTGTGTGATAACATCAAGTTAAGAGATCAGATGTACCCTGATGAGCC 399
||||||||||||||||||||||| ||| || ||||| |||||||||||||||||||||||
Sbjct 351 GGAGAAAGAAGGTGTGTGTGATACCATTAATTTAAGTGATCAGATGTACCCTGATGAGCC 410
Query 400 TTTCTGTTCCGAGATGAAAACTGAAACCATTGCTTCATCTCAGAAAACTGAAGGAGGCGA 459
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 411 TTTCTGTTCCGAGATGAAAACTGAAACCATTGCTTCATCTCAGAAATTTGAAGGAGGCGA 470
Query 460 GGGGAGTAATGTGGTTTTTTCGAGAGAGGCACCTTTGATAGGAAAGGATCCTGCTGGAAC 519
||||||||| |||||||||||||||||||||||||| |||||||||||| | ||||||||
Sbjct 471 GGGGAGTAAAGTGGTTTTTTCGAGAGAGGCACCTTTAATAGGAAAGGATTCAGCTGGAAC 530
Query 520 TAATTCGGGTGAATGCTGCGGTTGTAGTGCAAAGAAACTAAATTTCAAAGAGAATGATGA 579
||||||||| |||||||| ||||||||||| |||||||||||||| |||| | |||||||
Sbjct 531 TAATTCGGGAGAATGCTGTGGTTGTAGTGCTAAGAAACTAAATTTTAAAGGGGATGATGA 590
Query 580 TCTCATTGAAAAGGAAAATATTGGGCAGCAGAAAAAGCTTAATAGGCAAGAAAGAATCGA 639
|||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct 591 TCTCGTTGAGAAGGAAAATATTGAGCAGCAGAAAAAGCTTAATAGGCAAGAAAGAATTGA 650
Query 640 GTTGGGACGACTCTTCCAAGGCGCTGTTACCTCACTGGATTGGGAACTTGCTGAGAGATT 699
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 651 GTTGGGACGGCTCTTCCAAGGCGCTGTTACCTCACTGGATTGGGAACTTGCTGAGAGATT 710
Query 700 GATTCAGTTGGCTGATCCACAGACTTTAAATGATTTGTTGTGTGTTGGTCTTGATTCAGT 759
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 711 GATTCAGTTGGCTGATCCTCAGACTTTAAATGATTTGTTGTGTGTTGGTCTAGATTCAGT 770
Query 760 TTGGTTCTTGAGTACAAAGCCTGAGTTTCAGGGGATCACCGGATTGATTAAGAAGATCAT 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 771 TTGGTTCTTGAGTACAAAGCCTGAGTTTCAGGGGATCACCGGATTGATTAAGAAGATCAT 830
Query 820 ATGTCATGGTGCTCATGACTTTACCAGGGCTACTCTTAGGACTTCGTTTCTCGCTTCATG 879
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||
Sbjct 831 ATGTCATGGTGCTCATGACTTTACTAGAGCTACTCTTAGGACTTCGTTTCTCGCTTCTTG 890
Query 880 TGTCTCTGCTTGCCAGAGCCGGACAATGAGTCTTGCTGATACAGTAACTGTTATGGCTCA 939
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 891 TGTCTCTGCTTGCCAGAGCCGGACAATGAGTCTTTCTGATACAGTAACTGTTATGGCTCA 950
Query 940 AAGGTTGCATGAGCGTCTCCAAGAGTGCAACGGGGATGAGATTCTGAAAGCAGAGGCTGG 999
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 951 AAGGTTGCATGAGCGTCTCCAAGAGTGCAACGGGGATGAGATTCTAAAAGCAGAGGCTGG 1010
Query 1000 TGCCAAAGTTCAGAAGTTCACTGAATGGGCTCTCAAATGTATAGGTTTCCACTCCCGATG 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1011 TGCCAAAGTTCAGAAGTTCACTGAATGGGCTCTCAAATGTATAGGTTTCCACTCCCGATG 1070
Query 1060 CCAGGGGGCAAAGGATAGAGTTAGCCAAAATTCAGCTGCTGAGATTGAACTACAACTTTC 1119
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 1071 CCAGGGGGCAAAGGATAGAGTTAGCCAAAATTCGGCTGCTGAAATTGAACTACAACTTTC 1130
Query 1120 TGCTTTCAAGATGTTCTTAGATCTAGCAGGAAACCATCTATCAGGAAGAGACTTCACTGA 1179
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1131 TGCTTTCAAGATGTTCTTAGATCTAGCAGGAAACCATCTCTCAGGAAGAGACTTCACTGA 1190
Query 1180 GGCCTTCGATGCAGCTTGTTTCCCGCTCACTCTGTTCTCCAACTCGTTTGATCCTGGCTG 1239
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1191 GGCCTTTGATGCAGCTTGTTTCCCGCTCACTCTGTTCTCCAACTCGTTTGATCCTGGCTG 1250
Query 1240 GGCATCTGGAATGTCAGCTACTGTTATACAGGGACTGCTCGGTATGCTTGTTGAAGGTGG 1299
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1251 GGCATCTGGGATGTCAGCTACTGTTATACAGGGACTGCTCGGTATGCTTGTTGAAGGTGG 1310
Query 1300 CGCAGATAACGTGAATCAATGTTTCCTTGAAGCTTCACGTTTTGGTAGTACAGAACTTGT 1359
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1311 CGCAGATAATGTGAACCAATGTTTCCTTGAAGCTTCACGTTTTGGTAGTACAGAACTTGT 1370
Query 1360 CCGCGTCTTATTGCAGATTGCGCAAAGGAACAGCTTAGATGTTGATGTGGACTTAGCTCT 1419
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1371 CCGCGTCTTATTGCAGATTGCCCAAAGGAACAGCTTAGATGTTGATGTGGACTTAGCTCT 1430
Query 1420 TGGTTTTGCCTCGCATTATTGTAAAATAGGGACAATGAAGTGCCTAGTGGAAGAAGGTAA 1479
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 1431 TGGTTTTGCCTCGCATTATTGTAAAATCGGAACAATGAAGTGCCTAGTGGAAGAAGGTAA 1490
Query 1480 TGCCATTGCCTTCTTGGGCCCCTTAATGAGAGCAGCAGAGAGAGGTTGCATGCAAGTTGT 1539
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1491 TGCCATTGCCTTCTTGGGTCCCTTAATGAGAGCAGCAGAGAGAGGTTGCATGCAAGTTGT 1550
Query 1540 TCAATGGTTTGTGAAAAGAGGTTGCCGTGACATGGAACTTTGCTTGGCTCTAACAGCCGC 1599
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 1551 TCAATGGTTTGTGAAAAGAGGTTGCCGTGACATGGAGCTTTGCTTGGCTCTAACAGCGGC 1610
Query 1600 CACTTCAAGTTGCCAAGTCGAGGTCGCTGCTTATCTCCTCCCTCGTGTTCCACCACCTGT 1659
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1611 CACTTCAAGTTGCCAAGTCGAGGTAGCTGCTTATCTCCTCCCTCGTGTTCCACCACCTGT 1670
Query 1660 CTTAACCGCTCTCAGCATCGAAATCCTCAAAGCAGCTGGAGAAAGAAGCGGAGGGTCTCT 1719
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1671 CTTAACCGCTCTCAGCATCGAAATCCTCAAAGCAGCAGGAGAAAGAAGCGGAGGGTCTCT 1730
Query 1720 CCAAGGAGTAGAGTTTCTCCTCAAATCAGACTTCTTAGGAGATTCCACGGCTACATACTC 1779
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1731 CCAAGGAGTAGAGTTTCTTCTCAAATCAGACTTCTTAGGAGATTCCACGGCTACATACTC 1790
Query 1780 AGTTGCAGACAGCATCGCGAGGTCATCAGAAGACGAATCCGTTCCTTCAGATCTAAAATC 1839
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1791 AGTGGCAGACAGCATCGCAAGGTCATCAGAAGACGAATCCGTTCCTTCAGATCTAAAATC 1850
Query 1840 ATTTCTCCAAGAACACTGGTCGGAGTCAGCTTTTGAGAAAGGAATGAGAGAAAGCCATGA 1899
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GTTTCTCCAAGAACACTGGTCGGAGTCAGCTTTTGAGAAAGGAATGAGAGAAAGCCATGA 1910
Query 1900 CAATTTCATGAATTTCATGAGAGTTTTGAAAAAAGGCGAGTCCCCGATATCCTTAAGAGA 1959
| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 1911 CGATTTCATGAATTTCATGAGAGTTTTGAAAAAAGGGGAGTCAGCGATATCCTTAAGAGA 1970
Query 1960 CCTTCCTGCACCGCTAAGAGTAGCAATAGCCTACATGCCGCTGTACAGAGAGTGCATGAA 2019
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1971 CCTTCCTGCACCGCTAAGAGTAGCAATAGCGTACATGCCGCTGTACAGAGAGTGCATGAA 2030
Query 2020 AGGGGATGGTCGGTTACTGTCTCAGAGGCTAAGAGGACAGCTTGTGGAAGCTGTGAGACA 2079
|| ||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 2031 AGCGGACGGTCGGTTACTGTCTCAGAGGCTAAGAGGACAGCTTGTAGAAGCAGTGAGACA 2090
Query 2080 GCTTCAAGGTTGTGCTGTTGCAGTTGTGGAAGTAAGCCAGACTCGTAACCTTATGGCGGT 2139
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2091 GCTTCAAGGCTGTGCTGTTGCAGTTGTGGAAGTAAGCCAGACTCGTAACCTTATGGCGGT 2150
Query 2140 TTTGGAGCATCACCTTACCGCCATTTTCGATTGAAACAAATGGATTCTGCTTT-GGGCTT 2198
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2151 TTTGGAGCATCACCTTACCGCCATTTTCGATTGAAACAAATGGATTCTGCTTTTGGGCTT 2210
Query 2199 CTTCACTGCTTTTCTAATTTCTACGAATAGTTGAAAA-A------TAA---CG--GAT-- 2244
| |||| |||||||||||||||||||||||||||| | ||| | |||
Sbjct 2211 C---ACTGGTTTTCTAATTTCTACGAATAGTTGAAAATAAGCAAATAAATACTACGATTT 2267
Query 2245 A--T-A-----T---GGGATT-GGGTTTGAGATGACGAAGTGAGGttttttt-------- 2284
| | | | |||||| ||||||||||||||||||||||||||||||
Sbjct 2268 AAATTAACGGATATTGGGATTTGGGTTTGAGATGACGAAGTGAGGTTTTTTTTTTTTTTT 2327
Query 2285 -GTATAATTTGTTCTTATGATGATGCGTCTATTATGTCAGTCTCTTCTCCTCCATTTCCC 2343
||||||||| ||||||||||| | | | ||||||||||||||||||||||||||||| |
Sbjct 2328 TGTATAATTTCTTCTTATGATGCTTC-TATATTATGTCAGTCTCTTCTCCTCCATTTCTC 2386
Query 2344 TTATT 2348
|||||
Sbjct 2387 TTATT 2391
> AT2G44090.1 | Symbols: | Ankyrin repeat family protein | chr2:18238360-18241293
REVERSE LENGTH=2536
Length=2536
Score = 1428 bits (773), Expect = 0.0
Identities = 1264/1502 (84%), Gaps = 29/1502 (2%)
Strand=Plus/Plus
Query 600 TTGGGCAGCAGAAAAAGCTTAATAGGCAAGAAAGAATCGAGTTGGGACGACTCTTCCAAG 659
||| ||| ||||| ||||||||||| || || |||||||| |||||||| || |||||||
Sbjct 626 TTGAGCAACAGAAGAAGCTTAATAGACAGGATAGAATCGAATTGGGACGGCTTTTCCAAG 685
Query 660 GCGCTGTTACCTCACTGGATTGGGAACTTGCTGAGAGATTGATTCAGTTGGCTGATCCAC 719
| ||||||| ||||| ||||||| ||||| | |||||||| |||||| ||||||||||||
Sbjct 686 GTGCTGTTAGCTCACAGGATTGGCAACTTTCAGAGAGATTTATTCAGCTGGCTGATCCAC 745
Query 720 AGACTTTAAATGATTTGTTGTGTGTTGGTCTT-GATTC-AGTTTGGTTCTTGAGTACAAA 777
| ||||| |||||| |||||||| || || || ||||| | ||||||||||||| ||| |
Sbjct 746 AAACTTTGAATGATCTGTTGTGTATTAGT-TTAGATTCTA-TTTGGTTCTTGAGCACAGA 803
Query 778 GCCTGAGTTTCAGGGG-ATCACCGGATTGATTAAGAAGATCATATGTCATGGTGCTCATG 836
|| |||||| | |||| ||||| | ||||||| ||||||||||||||||||||||| |
Sbjct 804 GCATGAGTTAC-GGGGAATCACTGAATTGATTGCTAAGATCATATGTCATGGTGCTCAGG 862
Query 837 ACTTTACCAGGGCTACTCTTAGGACTTCGTTTCTCGCTTCATGTGTCTC-TGCTTGCCAG 895
||| ||| || ||||| ||||||||||| ||||| ||||| ||||| || | |||||||
Sbjct 863 ACTATACTAGAGCTACACTTAGGACTTCCTTTCTTGCTTCTTGTGTTTCAT-CTTGCCAT 921
Query 896 AGCCGGACAATGAGTCTTGCTGATACAGTAACTGTTATGGCTCAAAGGTTGCATGAGCGT 955
|||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 922 AGCCGGACTGTGAGTCTTGCTGATACTGTAACTGTTATGGCTCAAAGGTTGCACGAGCGT 981
Query 956 CTCCAAGAGTGCAACGGGGATGAGATTCTGAAAGCAGAGGCTGGTGCCAAAGTTCAGAAG 1015
||||||||||| ||||| |||||| | || |||||||| |||||||| |||||||| |||
Sbjct 982 CTCCAAGAGTGTAACGGTGATGAGGTCCTCAAAGCAGAAGCTGGTGCTAAAGTTCAAAAG 1041
Query 1016 TTCACTGAATGGGCTCTCAAATGTATAGGTTTCCACTCCCGATGCCAGGGGGCAAAG-GA 1074
|| ||||||||||| ||||||||||||||||| |||||||||||||| ||| | || ||
Sbjct 1042 TTTACTGAATGGGCACTCAAATGTATAGGTTTTCACTCCCGATGCCA-GGGCCCTAGAGA 1100
Query 1075 TAGAGTTAGCCAAAATTCAGCTGCTGAGATTGAACTACAACTTTCTGCTTTCAAGATGTT 1134
|| || || |||| | |||||||||||||| |||| || ||||||||||||||||||||
Sbjct 1101 TAAAGCTAACCAAGACTCAGCTGCTGAGATCCAACTCCAGCTTTCTGCTTTCAAGATGTT 1160
Query 1135 CTTAGATCTAGCAGGAAACCATCTATCAGG-AAGAGACTTCACTGAGGCCTTCGATGCAG 1193
||||||||| |||||||||||||||||||| ||| || ||||| || ||||| |||||||
Sbjct 1161 CTTAGATCTTGCAGGAAACCATCTATCAGGAAAG-GATTTCACAGAAGCCTTTGATGCAG 1219
Query 1194 CTTGTTTCCCGCTCACTCTGTTCTCCAACTCGTTTGATCCTGGCTGGGCATCTGGAATGT 1253
|||| |||||||| || |||||||| | ||||||| ||||||||||||| |||||||| |
Sbjct 1220 CTTGCTTCCCGCTTACGCTGTTCTCTACCTCGTTTAATCCTGGCTGGGCTTCTGGAATTT 1279
Query 1254 CAGCTACTGTTATACAGGGACTGCTCGGTATGCTTGTTGAAGGTGGCGCAGATAACGTGA 1313
|||||||||| ||||| ||| ||||||||||||| || ||||| ||||||||||| || |
Sbjct 1280 CAGCTACTGTCATACATGGATTGCTCGGTATGCTGGTGGAAGGAGGCGCAGATAATGTAA 1339
Query 1314 ATCAATGTTTCCTTGAAGCTTCACGTTTTGGTAGTACAGAACTTGTCCGCGTCTTATTGC 1373
|||| || |||||||||||||| |||||||| || ||||||||||| ||| |||| ||||
Sbjct 1340 ATCAGTGCTTCCTTGAAGCTTCTCGTTTTGGGAGCACAGAACTTGTGCGCATCTTGTTGC 1399
Query 1374 AGATTGCGCAAAGGAACAGCTTAGATGTTGATGTGGACTTAGCTCTTGGTTTTGCCTCGC 1433
||||||| |||||||| |||||||| || ||||| |||||||| ||||||||||||||||
Sbjct 1400 AGATTGCTCAAAGGAATAGCTTAGACGTGGATGTTGACTTAGCCCTTGGTTTTGCCTCGC 1459
Query 1434 ATTATTGTAAAATAGGGACAATGAAGTGCCTAGTGGAAGAAGGTAATGCCATTGCCTTCT 1493
||||| ||||||| | || ||| | ||||| || ||||||||| |||| ||||| ||||
Sbjct 1460 ATTATAGTAAAATCGAAACGATGGATTGCCTTGTAGAAGAAGGTCATGCAATTGCTTTCT 1519
Query 1494 TGGGCCCCTTAATGAGAGCAGCAGAGAGAGGTTGCATGCAAGTTGTTCAATGGTTTGTGA 1553
|||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1520 TGGGTCCCTTGATGAGAGCAGCGGAGAGAGGTTGCATGCAAGTTGTTCAATGGTTTGTGA 1579
Query 1554 AAAGAGGTTGCCGTGACATGGAACTTTGCTTGGCTCTAACAGCCGCCACTTCAAGTTGCC 1613
|| |||| || ||||| ||||| || ||||| ||||| ||||||||||||||||| |||
Sbjct 1580 AACGAGGCTGTCGTGAAATGGAGCTATGCTTAGCTCTCACAGCCGCCACTTCAAGCAGCC 1639
Query 1614 AAGTCGAGGTCGCTGCTTATCTCCTCCCTCGTGTTCCACCACCTGTC-TTAACCGCTCTC 1672
| || ||||| |||||||||||||| |||| ||||||| ||| ||| ||| | ||||||
Sbjct 1640 AGGTTGAGGTTGCTGCTTATCTCCTTCCTCATGTTCCAAGACCCGTCCTTA-CTGCTCTC 1698
Query 1673 AGCATCGAAATCCTCAAAGCAGCTGGAGAAAGAAGCGGAGGGTCTCTCCAAGGAGTAGAG 1732
||||| ||||||||||||||||| || |||||||| || || || ||||| |||||||||
Sbjct 1699 AGCATTGAAATCCTCAAAGCAGCCGGTGAAAGAAGTGGTGGTTCCCTCCACGGAGTAGAG 1758
Query 1733 TTTCTCCTCAAATCAGACTTCTTAGGAGATTCCA-CGGCTACATACTCAGTTGCAGACAG 1791
|||||||| |||||||| ||| | || ||| ||| | || ||||| |||||||||||||
Sbjct 1759 TTTCTCCTTAAATCAGATTTCCTCGGGGAT-CCAGCAGCCACATATTCAGTTGCAGACAC 1817
Query 1792 CATCGCGAGGTCATCAGAAGACGAATCCGTTCCTTCAGATCTAAAATCATTTCTCCAAGA 1851
||| || | |||| |||||||| || |||||||| || || ||||| |||||||||||
Sbjct 1818 CATTGCAAAGTCA---GAAGACGAGTCTGTTCCTTCCGACCTCAAATCGTTTCTCCAAGA 1874
Query 1852 ACACTGGTCGGA-GTCAGCTTTTGAGAAAGGAATGAGAG-AAAGCCATGACAATTTCATG 1909
||| ||||| || | | || || | ||||| ||| || |||||| || |||| ||||
Sbjct 1875 ACAGTGGTCAGAAG-CTGCATTCAACCAAGGATTGA-AGGAAAGCCGGGAAAATTACATG 1932
Query 1910 AATTTCATGAGAGTTTTGAAAAAAGGCGAGTCCCCGATA--TCCTTAAGAGACCTTCCTG 1967
||||||||||||||||||||| || ||||| | ||| || | ||| || || || |
Sbjct 1933 AATTTCATGAGAGTTTTGAAACTCGGAGAGTCTGCAATAAGTC-TAAAG-GATCTCCCAG 1990
Query 1968 CACCGCTAAGAGTAGCAATAGCCTACATGCCGCTGTACAGAGAGTGCATGAAAG-GGGAT 2026
|||| | ||||| ||||| ||||||||||| |||||||||||||| || | | ||| |
Sbjct 1991 CACCATTGAGAGTGGCAATCGCCTACATGCCACTGTACAGAGAGTGTGTGGATGCGGG-T 2049
Query 2027 GGTCGGTTACTGTCTCAGAGGCTAAGAGGACAGCTTGTGGAAGCTGTGAGACAGCTTCAA 2086
|| ||| | || || || | ||||||||||||||| |||||||||| | ||||||| ||
Sbjct 2050 GGCCGGCTGCTCTCACAAAAGCTAAGAGGACAGCTCGTGGAAGCTGCAACACAGCTTGAA 2109
Query 2087 GG 2088
||
Sbjct 2110 GG 2111
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 118623887835
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5