BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486456
Length=1527
Score E
Sequences producing significant alignments: (Bits) Value
AT3G59920.1 | Symbols: ATGDI2, GDI2 | RAB GDP dissociation inhi... 2477 0.0
AT2G44100.1 | Symbols: ATGDI1, AT-GDI1, GDI1 | guanosine nucleo... 1528 0.0
> AT3G59920.1 | Symbols: ATGDI2, GDI2 | RAB GDP dissociation inhibitor
2 | chr3:22134999-22138457 FORWARD LENGTH=1729
Length=1729
Score = 2477 bits (1341), Expect = 0.0
Identities = 1446/1495 (97%), Gaps = 13/1495 (1%)
Strand=Plus/Plus
Query 17 TCTCTAtttttttGCTTCCTCTAATAGAATTCTCCCTCGAC-GATCTCCCTCGACGATCT 75
|||||||||||||||||| ||||||||| |||| | || || |||||||| |||||||||
Sbjct 36 TCTCTATTTTTTTGCTTCTTCTAATAGACTTCTTCGTC-ACTGATCTCCCACGACGATCT 94
Query 76 CCCAAACTCATTTCTCTGCGTTCATCGAtctctctctctcGCGTTTGCTCTACGAAACTT 135
||||||||||||||||| ||||||||||||||||||| || ||||||||||||| ||
Sbjct 95 CCCAAACTCATTTCTCTACGTTCATCGATCTCTCTCTTTCTCGTTTGCTCTACG-AA--- 150
Query 136 TCGGAATCAGCCATGGATGAAGAGTACGAGGTTATTGTTCTCGGCACCGGTCTCAAGGAG 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 151 ----AATCAGCCATGGATGAAGAGTACGAGGTTATTGTTCTCGGCACCGGTCTCAAGGAG 206
Query 196 TGTATCCTCAGCGGTCTCCTTTCCGTCGATGGTGTCAAGGTGCTTCACATGGACAGGAAT 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 207 TGTATCCTCAGCGGTCTCCTTTCCGTCGATGGTGTCAAGGTGCTTCACATGGACAGGAAT 266
Query 256 GACTACTATGGTGGAGAATCAACTTCGCTTAATCTCAATCAGCTTTGGAAGAAGTTCAGG 315
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 267 GACTACTATGGTGGAGAATCAACTTCCCTTAATCTCAATCAGCTTTGGAAGAAGTTCAGG 326
Query 316 GGAGAAGAGAAGGCTCCTGAGCATTTAGGCGCTAGCCGGGATTACAATGTTGACATGATG 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 327 GGAGAAGAGAAGGCTCCTGAGCATTTAGGCGCTAGCCGGGATTACAATGTTGACATGATG 386
Query 376 CCTAAGTTTATGATGGGAAATGGCAAGCTTGTTCGTACCCTTATTCATACAGATGTTACA 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 387 CCTAAGTTTATGATGGGAAATGGCAAGCTTGTTCGTACCCTTATTCATACAGATGTTACA 446
Query 436 AAGTATTTGTCCTTCAAAGCTGTTGATGGAAGCTATGTTTTCGTTAAAGGGAAGGTTCAA 495
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 447 AAGTATTTGTCCTTCAAAGCTGTTGATGGAAGCTATGTTTTCGTCAAAGGAAAGGTTCAA 506
Query 496 AAGGTGCCAGCTACTCCTATGGAGGCCCTGAAATCTTCTCTCATGGGTATTTTTGAGAAA 555
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 507 AAGGTGCCAGCTACTCCTATGGAGGCCCTGAAATCTTCTCTCATGGGCATATTTGAGAAA 566
Query 556 CGTCGAGCCGGCAAGTTTTTCAGTTTTGTTCAGGAATACGATGAGAAGGACCCAAAAACA 615
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 567 CGTCGAGCCGGCAAGTTTTTCAGTTTTGTTCAAGAATACGATGAGAAGGACCCAAAAACA 626
Query 616 CACGATGGAATGGATTTGAGCAGAGTTACAACAAAGGAACTGATTGCGAAATATGGTCTT 675
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 627 CACGATGGAATGGATTTGACCAGAGTTACAACAAAGGAACTGATTGCGAAATATGGTCTT 686
Query 676 GATGGCAACACTATTGACTTTATTGGTCACGCAGTGGCACTTCACACGAATGACCAACAT 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 687 GATGGCAACACTATTGACTTTATTGGTCACGCAGTGGCACTTCACACGAATGACCAACAT 746
Query 736 CTCGATCAACCTGCCTTGGATACTGTACTGAGAATGAAGCTCTATGCGGAATCTCTTGCA 795
||||| ||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct 747 CTCGACCAACCCGCCTTTGATACTGTAATGAGAATGAAGCTCTATGCGGAATCTCTTGCA 806
Query 796 CGTTTCCAAGGAACCTCTCCATATATTTATCCTCTCTATGGGTTGGGAGAACTACCCCAG 855
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 807 CGTTTCCAAGGAACATCTCCATATATTTATCCTCTCTATGGGTTGGGAGAACTACCCCAG 866
Query 856 GCATTTGCACGACTTAGTGCTGTCTATGGTGGCACATATATGTTGAACAAACCTGAGTGC 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 867 GCATTTGCACGACTTAGTGCTGTCTATGGTGGCACATATATGTTGAACAAACCTGAGTGC 926
Query 916 AAGGTAGAGTTTGACGAGGAAGGTAAGGTTACTGGTGTAACATCTGAGGGAGAGACTGCC 975
||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 927 AAGGTAGAGTTTGACGAGGGAGGTAAGGTTATTGGTGTAACATCTGAGGGAGAGACTGCT 986
Query 976 AAATGCAAAAAGATTGTGTGTGACCCTTCCTACCTGCCGAACAAGGTTAGGAAGATTGGC 1035
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 987 AAATGCAAAAAGATTGTGTGTGACCCTTCATACCTGCCGAACAAGGTTAGGAAGATTGGC 1046
Query 1036 AGGGTTGCTCGGGCCATCGCCATTATGAGCCACCCAATTCCAAACACCAACGATTCTCAC 1095
||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||
Sbjct 1047 AGGGTTGCTCGGGCCATCGCCATTATGAGCCACCCGATTCCGAACACCAATGATTCTCAC 1106
Query 1096 TCAGTGCAGGTCATCATACCCCAGAAACAGTTGGCCCGCAAATCTGATATGTATGTCTTC 1155
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1107 TCAGTGCAGGTCATCATACCCCAGAAACAGTTGGCCCGCAAATCGGATATGTATGTCTTC 1166
Query 1156 TGTTGTTCGTACTCCCACAACGTTGCTCCCAAGGGGAAATTCATTGCATTTGTGTCTACA 1215
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1167 TGTTGTTCGTACTCCCACAACGTTGCTCCCAAGGGAAAATTCATTGCATTTGTGTCTACA 1226
Query 1216 GATGCAGAGACTGATAACCCTCAAACCGAACTAAAGCCTGGAACTGATCTTTTGGGTCCT 1275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1227 GATGCAGAGACTGATAACCCTCAAACCGAACTAAAGCCTGGAACTGATCTTTTGGGTCCT 1286
Query 1276 GTTGATGAGATATTCTTCGACATGTATGATAGGTACGAGCCTGTCAACGAGCCAGAGTTG 1335
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1287 GTTGATGAGATATTCTTCGACATGTATGATAGATACGAGCCTGTCAACGAGCCAGAGTTG 1346
Query 1336 GACAACTGCTTTATATCAACGAGCTATGATGCTACAACACACTTTGAGACAACTGTTGCG 1395
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1347 GACAACTGCTTTATTTCAACGAGCTATGATGCTACAACACACTTTGAGACAACTGTTGCG 1406
Query 1396 GATGTGTTGAACATGTATACTCTAATCACTGGAAAGCAACTTGACCTAAGTGTTGACCTG 1455
|||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||
Sbjct 1407 GATGTGTTGAACATGTATACCCTAATCACCGGAAAGCAACTGGACCTAAGTGTTGACCTG 1466
Query 1456 AGTGCCGCAAGTGCTGCAGAGGAATGAGGAATCA-C-C-AGATCGctctctctct 1507
||||||||||||||||||||||||||| |||||| | | ||||||||| ||||||
Sbjct 1467 AGTGCCGCAAGTGCTGCAGAGGAATGAAGAATCATCACCAGATCGCTCCCTCTCT 1521
> AT2G44100.1 | Symbols: ATGDI1, AT-GDI1, GDI1 | guanosine nucleotide
diphosphate dissociation inhibitor 1 | chr2:18241692-18246498
FORWARD LENGTH=3084
Length=3084
Score = 1528 bits (827), Expect = 0.0
Identities = 1176/1344 (88%), Gaps = 26/1344 (2%)
Strand=Plus/Plus
Query 148 ATGGATGAAGAGTACGAGGTTATTGTTCTCGGCACCGGTCTCAAGGAGTGTATCCTCAGC 207
||||||||||||||||| || || ||||| || || |||||||||||||| ||||| ||
Sbjct 113 ATGGATGAAGAGTACGAAGTCATAGTTCTGGGTACTGGTCTCAAGGAGTGCATCCTTAGT 172
Query 208 GGTCTCCTTTCCGTCGATGGTGTCAAGGTGCTTCACATGGACAGGAATGACTACTATGGT 267
||||| || |||||||||||| | ||||| |||||||||||||||||||||||||| |||
Sbjct 173 GGTCTTCTCTCCGTCGATGGTCTTAAGGTACTTCACATGGACAGGAATGACTACTACGGT 232
Query 268 GGAGAATCAACTTCGCTTAATCTCAATCAGCTTTGGAAGAAGTTCAGGGGAGAAGAGAAG 327
||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 233 GGAGAGTCAACTTCTCTTAATCTCAATCAGCTGTGGAAGAAGTTCAGGGGAGAAGAGAAG 292
Query 328 GCTCCTGAGCATTTAGGCGCTAGCCGGGATTACAATGTTGACATGATGCCTAAGTTTATG 387
||||||| |||||||| ||||| | || |||||||||||||||||||| |||||||||
Sbjct 293 GCTCCTGCTCATTTAGGTTCTAGCAGAGACTACAATGTTGACATGATGCCAAAGTTTATG 352
Query 388 ATGGGAAATGGCAAGCTTGTTCGTACCCTTATTCATACAGATGTTACAAAGTATTTGTCC 447
|||| || || |||||||||||| |||||||||||| ||||| || ||||| |||||
Sbjct 353 ATGGCTAACGGAAAGCTTGTTCGTGTCCTTATTCATACGGATGTGACCAAGTACTTGTCT 412
Query 448 TTCAAAGCTGTTGATGGAAGCTATGTTTTCGTTAAAGGGAAGGTTCAAAAGGTGCCAGCT 507
|| |||||||||||||||||||||||||| || |||| ||||| ||||| ||||||||
Sbjct 413 TTTAAAGCTGTTGATGGAAGCTATGTTTTTGTCCAAGGCAAGGTCCAAAAAGTGCCAGCA 472
Query 508 ACTCCTATGGAGGCCCTGAAATCTTCTCTCATGGGTATTTTTGAGAAACGTCGAGCCGGC 567
||||| ||||||||||| |||||| |||| |||||||||||||||||||||||||| ||
Sbjct 473 ACTCCCATGGAGGCCCTCAAATCTCCTCTTATGGGTATTTTTGAGAAACGTCGAGCTGGA 532
Query 568 AAGTTTTTCAGTTTTGTTCAGGAATACGATGAGAAGGACCCAAAAACACACGATGGAATG 627
||||||||||| | |||||| |||||||| |||||||||||||||||||| |||||||||
Sbjct 533 AAGTTTTTCAGCTATGTTCAAGAATACGACGAGAAGGACCCAAAAACACATGATGGAATG 592
Query 628 GATTTGAGCAGAGTTACAACAAAGGAACTGATTGCGAAATAT-GGTCTTGATGGCA-ACA 685
|||||||| ||||||||||| ||||| |||||||||||| | |||||| | | | | |
Sbjct 593 GATTTGAGGAGAGTTACAACTAAGGATTTGATTGCGAAAT-TCGGTCTT-AAAGAAGATA 650
Query 686 CTATTGACTTTATTGGTCACGCAGTGGCACTTCACACG-AATGACCAA-CATCTCGATCA 743
||||||||||||||||||| ||||||||||||||| | ||||| ||| |||||| ||||
Sbjct 651 CTATTGACTTTATTGGTCATGCAGTGGCACTTCAC-TGTAATGA-CAATCATCTCCATCA 708
Query 744 ACCTGCCT-TGGATACTGTACTGAGAATGAAGCTCTATGCGGAATCTCTTGCACGTTTCC 802
|||||||| | ||||||||| |||||||||||||||| || || || ||||||||||| |
Sbjct 709 ACCTGCCTAT-GATACTGTAATGAGAATGAAGCTCTACGCAGAGTCCCTTGCACGTTTTC 767
Query 803 AAGGAACCTCTCCATATATTTATCCTCTCTATGGGTTGGGAGAACTACCCCAGGCATTTG 862
||||| || |||||||| |||||||||||||||||||||||| | || ||||||||||
Sbjct 768 AAGGAGGTTCACCATATATCTATCCTCTCTATGGGTTGGGAGAATTGCCTCAGGCATTTG 827
Query 863 CACGACTTAGTGCTGTCTATGGTGGCACATATATGTTGAACAAACCTGAGTGCAAGGTAG 922
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 828 CACGACTTAGTGCTGTCTATGGTGGGACGTATATGTTGAACAAACCTGAGTGCAAGGTAG 887
Query 923 AGTTTGACGAGGAAGGTAAGGTTACTGGTGTAACATCTGAGGGAGAGACTGCCAAATGCA 982
||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct 888 AGTTTGACGAGGAGGGTAAGGTTTCTGGTGTTACATCTGAGGGAGAGACTGCCAAATGCA 947
Query 983 A-AAAGATTGTGTGTGACCCTTCCTACCTG-CCGAACAAGGTTAGGAAGATTGGCAGGGT 1040
| |||| |||| || || ||||| ||||| || |||||||| |||||||||||||||||
Sbjct 948 AGAAAG-TTGTCTGCGATCCTTCTTACCTAACC-AACAAGGTCAGGAAGATTGGCAGGGT 1005
Query 1041 TGCTCGGGCCATCGCCATTATGAGCCACCCAATTCCAAACACCAACGATTCTCACTCAGT 1100
||||||||| || ||||||||||||||||| |||||||||||||| |||||||| || ||
Sbjct 1006 TGCTCGGGCGATTGCCATTATGAGCCACCCTATTCCAAACACCAATGATTCTCAGTCGGT 1065
Query 1101 GCAGGTCAT-CATACCCCAGAAACAGTTGGCCCGCAAATCTGATATGTATGTCTTCTGTT 1159
||| ||||| | ||||||| ||||| |||| ||||||||| || ||||||||||||||||
Sbjct 1066 GCAAGTCATTC-TACCCCAAAAACAATTGGGCCGCAAATCAGACATGTATGTCTTCTGTT 1124
Query 1160 GTTCGTACTCCCACAACGTTGCTCCCAAGGGGAAA-TTCATTGCATTTGTGTCTACAGAT 1218
|||| || || |||||||||||||||||||| ||| ||||| ||||||||||| |||||
Sbjct 1125 GTTCATATTCACACAACGTTGCTCCCAAGGG-AAAGTTCATAGCATTTGTGTCAACAGAC 1183
Query 1219 GCAGAGACTGATAACCCTCAAACCGAACTAAAGCCTGGAA-CTGATCTT-TTGGGTCCTG 1276
|| || |||||||||||||||||||| || ||||||||| | || ||| |||| |||||
Sbjct 1184 GCTGAAACTGATAACCCTCAAACCGAGCTCCAGCCTGGAATC-GACCTTCTTGG-TCCTG 1241
Query 1277 TTGATGAGATATTCTTCGACATGTATGATAGGTACGAGCCTGTCAACGAGCCAGAGTT-G 1335
|||||||| | ||||||||||| |||||||| || |||||||||||||| || | || |
Sbjct 1242 TTGATGAGCTGTTCTTCGACATCTATGATAGATATGAGCCTGTCAACGAACCC-ACTTTG 1300
Query 1336 GACAACTGCTTTATATCAACGAGCTATGATGCTACAACACACTTTGAGACAACTGTTGCG 1395
||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 1301 GACAACTGCTTCATATCAACGAGTTATGATGCTACAACACACTTTGACACAACTGTTGTT 1360
Query 1396 GATGTGTTGAACATGTATAC-TCTAATCACTGGAAAGCAACTTGACCTAAGTGTTGACCT 1454
||||||||||||||||||| | | ||||| |||||| |||| || |||||||| || ||
Sbjct 1361 GATGTGTTGAACATGTATAAAT-TGATCACCGGAAAGGAACTGGATCTAAGTGTGGATCT 1419
Query 1455 GAGTGCCGCAAGTGCTGCAGAGGA 1478
| || || ||||||||||||||
Sbjct 1420 TAACGCAGCTAGTGCTGCAGAGGA 1443
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 75351018045
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5