BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg486460
Length=1782
Score E
Sequences producing significant alignments: (Bits) Value
AT3G59950.1 | Symbols: | Peptidase family C54 protein | chr3:2... 2870 0.0
AT2G44140.1 | Symbols: | Peptidase family C54 protein | chr2:1... 1216 0.0
> AT3G59950.1 | Symbols: | Peptidase family C54 protein | chr3:22144280-22147691
REVERSE LENGTH=1905
Length=1905
Score = 2870 bits (1554), Expect = 0.0
Identities = 1718/1795 (96%), Gaps = 19/1795 (1%)
Strand=Plus/Plus
Query 1 AATCATCCATATTCGAAGCTT--AAG--ATAATTACGTAAAAT--ag-aga-agagagag 52
||| ||||||||||||||||| ||| ||||||||||||||| || ||| ||||||||
Sbjct 1 AATGATCCATATTCGAAGCTTAAAAGATATAATTACGTAAAATAGAGAAGAGAGAGAGAG 60
Query 53 agaACACGAAACTTTTTATTTCGTAAGGTTACACGAAATCGATCTTCCGCAATTCAAACT 112
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 AGAACACGAAAC-TTTTATTTCGTAAGGTTACACGAAATCGATCTTCCGCAATTCAAACT 119
Query 113 TCGTCTCCGTTAATTCGCACTCTCGTTCTCGTCTTCGTCGCCGGAGGTCGTATCAAGTCA 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 120 TCGTCTCCGTTAATTCGCACTCTCGTTCTCGTCTTCGTCGCCGGAGGTCGTATCAAGTCA 179
Query 173 GCCTCGACGATCCGATTTGTATTTTCAGACAAAGGAAGGAAGAT-TCTGAGTATTAGTTT 231
||||| |||||||||||||| |||||||||||||| | | | |||| |||| |||||
Sbjct 180 GCCTCAACGATCCGATTTGTTTTTTCAGACAAAGG-TTG-A-TTCTCTGGGTATGAGTTT 236
Query 232 TCTTCTATGAGACAGACATGTTGCATTTGGTACTTAATGACTAGGTAATGAAGGCTATAT 291
||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct 237 TCTTCTATGAGACAGACATGTTGTATTTGGTGCTTAATGACTAGGTAATGAAGGCTATAT 296
Query 292 GTGATAGATTTGTTCCTTCAAAATGTTCTTCATCATGCACAAGTGAAAAGCGTG--ATAT 349
||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct 297 GTGATAGATTTGTTCCTTCAAAATGTTCTTCATCAAGCACAAGTGAAAAGCGTGATATAT 356
Query 350 -ATCCCAGACATCTCTAGTTTCAGATTCAC-CGTCTAGTGACAACAAGTCAAACTTGACG 407
||||| ||||||||||||||||||||| | |||||||||| ||||||||||||||||||
Sbjct 357 CATCCCCGACATCTCTAGTTTCAGATTC-CGCGTCTAGTGATAACAAGTCAAACTTGACG 415
Query 408 TTATGCTCGGATGTGGTTGCGTCTTCCTCCCCAGTTTCTCAACCGTGTAGGGAAGCTTCA 467
|||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct 416 TTATGCTCGGATGTGGTTGCCTCTTCCTCCCCAGTTTCTCAACTGTGTAGGGAAGCTTCA 475
Query 468 ACTTCCGAGCATAAGCCAGTTTGCACCACACATAATAGTTGGACAGTTATTTTAAAAACA 527
||||| | |||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 476 ACTTCAGGGCATAACCCAGTTTGCACCACACATAGTAGTTGGACAGTTATTTTAAAAACA 535
Query 528 GCTTCTATGGCTAGTGGGGCAATTAGGAGATTTCAAGACCGTGTATTAGGGCCGAGTAGG 587
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 536 GCTTCTATGGCTAGCGGGGCAATTAGGAGATTTCAAGACCGTGTATTAGGGCCGAGTAGG 595
Query 588 ACGGGTATTTCCAGCAGTACAAGTGAGATATGGCTCCTGGGTGTCTGTTATAAAATCTCA 647
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 596 ACGGGTATTTCCAGCAGTACTAGTGAGATATGGCTCCTGGGTGTCTGTTATAAAATCTCA 655
Query 648 GAGGCTGAATCCTCCGAAGAAGCAGATGCTGGCCGTGTATTGGCTGCATTCAGACAAGAT 707
|||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 656 GAGGGTGAATCCTCAGAAGAAGCAGATGCTGGCCGTGTATTGGCCGCATTCAGACAAGAT 715
Query 708 TTTTCATCCTTAATACTAATGACATATCGTAGAGGTTTTGAGCCTATTGGAGACACAACT 767
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 716 TTTTCATCCTTAATACTGATGACATATCGTAGAGGTTTTGAGCCTATTGGAGACACAACT 775
Query 768 TATACTAGTGATGTAAACTGGGGTTGCATGCTTCGAAGTGGCCAGATGCTCTTTGCACAG 827
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 776 TATACTAGTGATGTAAACTGGGGTTGCATGCTTCGAAGCGGCCAGATGCTCTTCGCACAG 835
Query 828 GCGTTGCTATTCCAAAGGCTGGGAAGGTCTTGGAGGAAAAAGGATTCCGAGCCTGCGAAT 887
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct 836 GCGTTGCTATTTCAAAGGCTGGGAAGGTCTTGGAGGAAAAAGGATTCCGAGCCCGCGGAT 895
Query 888 GAGAAATACTTAGAGATCTTAGAACTTTTTGGTGATACTGAGGCTTCAGCATTCTCGATT 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 896 GAGAAATACTTAGAGATCTTAGAACTTTTTGGTGATACTGAGGCTTCAGCATTCTCGATT 955
Query 948 CACAATCTTATACTAGCTGGAGAATCCTATGGCCTGGCTGCTGGGTCATGGGTAGGACCA 1007
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 956 CACAATCTTATACTAGCTGGAGAATCTTATGGCCTGGCTGCTGGGTCATGGGTAGGACCA 1015
Query 1008 TATGCTGTTTGTCGATCATGGGAATCATTAGCTCGGAAGAACAAAGAAGAAACTGATGTT 1067
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1016 TATGCTGTTTGTCGATCATGGGAATCATTAGCTCGGAAGAACAAAGAAGAAACTGATGAT 1075
Query 1068 AAACACAAGTCGTTTTCCATGGCTGTTCATATCGTTTCTGGCAGTGAAGATGGAGAGAGA 1127
|| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1076 AAGCACAAGTCGTTTTCCATGGCTGTTCATATCGTTTCTGGCAGTGAAGACGGAGAGAGA 1135
Query 1128 GGTGGAGCTCCAATTCTCTGTATTGAAGATGTCACCAAAACTTGTTTGGAATTTTCAGAA 1187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1136 GGTGGAGCTCCAATTCTCTGTATTGAAGATGTCACCAAAACTTGTTTGGAATTTTCAGAA 1195
Query 1188 GGGGAAACTGAGTGGCCGCCAATTCTTCTCTTGGTCCCTCTGGTTCTCGGGCTTGACAAA 1247
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1196 GGAGAAACTGAGTGGCCGCCAATTCTTCTCTTGGTCCCTCTGGTTCTCGGGCTTGACAGA 1255
Query 1248 GTGAACCCCAGGTACATTCCGTCTCTGATAGCCACTTTCACATTCCCTCAAAGCCTCGGC 1307
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 1256 GTGAACCCCAGGTACATTCCATCTCTGATAGCCACTTTCACGTTCCCTCAAAGCCTCGGC 1315
Query 1308 ATTTTGGGCGGCAAACCAGGTGCATCAACTTACATAGTTGGAGTTCAAGAAGACAAAGGT 1367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1316 ATTTTGGGCGGCAAACCAGGTGCATCAACTTACATAGTTGGAGTTCAAGAAGACAAAGGT 1375
Query 1368 TTCTACCTTGATCCGCATGATGTTCAACAGGTAGTGACAGTCAAGAAAGAAAATCAAGAT 1427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1376 TTCTACCTTGATCCGCATGATGTTCAACAGGTAGTGACAGTCAAGAAAGAAAATCAAGAT 1435
Query 1428 GTTGACACATCGTCTTACCATTGCAATACCCTCCGTTATGTTCCGCTTGAGTCACTCGAC 1487
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1436 GTTGACACATCGTCTTACCATTGCAATACCCTCCGTTATGTTCCACTTGAGTCACTCGAC 1495
Query 1488 CCGTCACTAGCTCTTGGATTCTATTGCCAGGACAAAGATGATTTCGATGATTTCTGTATC 1547
|||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 1496 CCGTCACTAGCTCTCGGATTCTATTGCCAGCACAAAGATGATTTTGATGATTTCTGTATC 1555
Query 1548 CGAGCAACGAAGCTAGCGGGGGACTCTAATGGCGCTCCTCTCTTTACTGTGACTCAATCT 1607
|||||||| |||||||| || ||||||||||| ||||||||||| |||||||||||||||
Sbjct 1556 CGAGCAACAAAGCTAGCCGGAGACTCTAATGGTGCTCCTCTCTTCACTGTGACTCAATCT 1615
Query 1608 CACAGAACAAATGACTGTGGAATTGCAGAAACCAGCAGCAGCACAGTGATATCTACAGAG 1667
||||||| ||||||||| || |||||||||||||||||||| |||| || ||||||||||
Sbjct 1616 CACAGAAGAAATGACTGCGGGATTGCAGAAACCAGCAGCAGTACAGAGACATCTACAGAG 1675
Query 1668 ATCTCTGGTGAGGAACATGAAGATGACTGGCAATTACTTTGAACTCTTTTACTAGCCATT 1727
|||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||
Sbjct 1676 ATCTCTGGTGAGGAACATGAAGATGACTGGCAATTACTTTGAACACTTCTCCTAGCCATT 1735
Query 1728 CTATTTCATTGTGTGACTTTGTTCAATTGTCAAAATACCATTCTTTTTACACCGA 1782
|| ||||||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct 1736 CT-TTTCATTGTGTGACTTTGTTCAATTATCAAAATACCATTCTTTTTACATCGA 1789
> AT2G44140.1 | Symbols: | Peptidase family C54 protein | chr2:18253497-18258035
REVERSE LENGTH=3221
Length=3221
Score = 1216 bits (658), Expect = 0.0
Identities = 1179/1425 (83%), Gaps = 58/1425 (4%)
Strand=Plus/Plus
Query 212 AAGATTCTGAGTA-TTAGTTTTCTTCTATGAGACA-GACATGTTGCATTTGGTACTTAAT 269
||| |||| || | |||| || ||||||||||| | |||| |||||| ||||| ||| ||
Sbjct 141 AAGGTTCTCAGGATTTAGGTTGCTTCTATGAGA-AGGACACGTTGCAGTTGGTGCTTCAT 199
Query 270 GACTAGGTAATGAAGGCTATATGTGATAGATTTGTTCCTTCAA-AATGTTCTTCATCATG 328
| |||||||||||||||| ||||||||||||||||||| |||| |||||||||||||| |
Sbjct 200 GTCTAGGTAATGAAGGCTTTATGTGATAGATTTGTTCC-TCAACAATGTTCTTCATCAAG 258
Query 329 CACA-AGTGAAAAGCGTGATATATCCCAGACATCTCTAGTTTCAGATTCACCG-TCTAGT 386
|| | ||||| | || ||||| ||||| | | | ||||||||||||| | |||||
Sbjct 259 CA-AGAGTGATACGCATGATAAATCCC---C-T-T-TAGTTTCAGATTC-TGGACCTAGT 310
Query 387 GACAACAAGTCAAACTTGACGTTATGCTCGGATGTGGTTGCGTCTTCCTCCCCAGTTTCT 446
|| || ||||| || || || ||||| || | ||| || ||||||| ||| ||||||||
Sbjct 311 GATAATAAGTCCAAGTTTACCTTATGGTCAAACGTGTTTACGTCTTCTTCCTCAGTTTCT 370
Query 447 CAACCGTGTAGGGAAG-CTTCAACTTCCGAGCATAAGCCAGTTTGCACCACACATAATAG 505
||||||| ||||| || |||||||||| | |||||||| |||||||||||| | |||| |
Sbjct 371 CAACCGTATAGGG-AGTCTTCAACTTCTGGGCATAAGCAAGTTTGCACCACTCGTAATGG 429
Query 506 TTGGACAGTTATTT-TAAAAACAGCT-TCTATGGCTAGTGGGGCAATTAGGAGATTTCAA 563
|||||||| |||| |||||| || | |||||||||||||| |||||||||||||| ||
Sbjct 430 TTGGACAG-CATTTGTAAAAAGAG-TCTCTATGGCTAGTGGAGCAATTAGGAGATTCCAG 487
Query 564 GACCGTGTATTAGGGCCGAGTAGGACGGGTATTTCC-AGCAGTACAAGTGA-GATATGGC 621
|| ||||| |||||||| | |||||| ||| |||| |||| || ||||| | ||||||
Sbjct 488 GAGCGTGTTTTAGGGCCTAATAGGACCGGT-CTTCCGAGCACAACTAGTGACG-TATGGC 545
Query 622 TCCTGGGTGTCTGTTATAAAATCTCAGAGGCTGA-ATCCTCCGAAGAAGCAGATGCTGGC 680
|| |||||||||| |||||||| || | || ||| | ||| | ||| | ||| |||||
Sbjct 546 TCTTGGGTGTCTGCTATAAAATATCTGCGGATGAGA-ACTCAGGGGAAACCGATACTGGC 604
Query 681 -CGTGTATTGGCTGCATT-CAGACAAGATTTTTCATCCTTAATACTAATGACATATCGTA 738
| ||||||||||||||| || || ||||||||||||| |||||| |||||||||||||
Sbjct 605 AC-TGTATTGGCTGCATTGCA-ACTAGATTTTTCATCCAAAATACTGATGACATATCGTA 662
Query 739 GAGGTTTTG-AGCCTATTGGAGACACAACTTATACTAGTGATGTAAACTGGGGTTGCATG 797
|||||||| | ||| || |||||||||||||||| || ||||| |||||||||||||||
Sbjct 663 AAGGTTTTGAACCCT-TTAGAGACACAACTTATACCAGCGATGTGAACTGGGGTTGCATG 721
Query 798 CTTCGAAGTGGCCAGATGCTCTTTGCACAGGCGTTGCTATTCCAAAGGCTGGGAAGGTCT 857
|||||||| |||||||||| ||||| ||||||||||| ||||| |||||||| ||| ||
Sbjct 722 ATTCGAAGTAGCCAGATGCTTTTTGCTCAGGCGTTGCTTTTCCATAGGCTGGGGAGGGCT 781
Query 858 TGGAGGAAAAAGGATTCCGAGCCTGC-GAATGAGAAATACTTAGAGATCTTAGAACTTTT 916
|||| || || | || |||| | | ||| || |||||||||||| ||| |||| |||
Sbjct 782 TGGACTAAGAA--A-TCTGAGCTTCCTGAA-CAGGAATACTTAGAGACCTTGGAACCTTT 837
Query 917 TGGTGATACTGAGGCTTCAGCATTCTCGATTCACAATCTTATACTAGCTGGAGAATCCTA 976
||||||| | ||| ||||||| ||||| || |||||||||||| ||||||||| |||||
Sbjct 838 TGGTGATTCCGAGCCTTCAGCTTTCTCCATCCACAATCTTATAATAGCTGGAGCGTCCTA 897
Query 977 TGGCCTGGCTGCTGGGTCATGGGTAGGACCATATGCTGTTTGTCGATCATGGGAATCATT 1036
||| || ||||||||||||||||||||||| ||||| |||||||| | ||||| |||||
Sbjct 898 TGGTCTCGCTGCTGGGTCATGGGTAGGACCGTATGCCATTTGTCGAGCGTGGGAGTCATT 957
Query 1037 AGC-TCGGAAGAACA-AAGAAGAAACTGATGT-TAAACACAAGTCGTTTTCC-ATGGCTG 1092
||| | | ||||| | || || |||||||| | |||| || || || |||| |||||||
Sbjct 958 AGCGT-GCAAGAAGAGAA-AACAAACTGAT-TCTAAAAACCAGACG-CTTCCTATGGCTG 1013
Query 1093 TTCATATCGTTTCTGGCAGTGAAGATGGAGAGAGAGGTGGAGCTCCAATTCTCTGTATTG 1152
||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |
Sbjct 1014 TTCATATCGTTTCTGGCAGCGAAGATGGAGAGAGAGGTGGGGCTCCAATTCTCTGTATAG 1073
Query 1153 AAGATGTC-ACCAAAACTTGTTTGGAATTTTCAGAAGGGGAAACTGAGTGGCCGCCAATT 1211
|||||| | |||||| ||||| | ||||| ||| |||| | |||||||| | || |||
Sbjct 1074 AAGATG-CTACCAAATCTTGTCTAGAATTCTCAAAAGGACAGTCTGAGTGGACACCGATT 1132
Query 1212 CTTCTCTTGGTCCCTCTGGTTCTCGGGCTTGACAAAGTGAACCCCAGGTACATTCCGTCT 1271
| || ||||| || |||||||| |||||||||| ||||| |||||||||||||| |||
Sbjct 1133 ATCCTTTTGGTTCCACTGGTTCTTGGGCTTGACAGTGTGAATCCCAGGTACATTCCATCT 1192
Query 1272 CT-GATAGCCACTTTCACATTCCCTCAAAGCCTCGGCATTTTGGGCGGCAAACCAGGTGC 1330
|| | ||||||| ||||| || ||||| ||| | || |||||||| ||||||||||||||
Sbjct 1193 CTCG-TAGCCACATTCACTTTTCCTCAGAGCGTGGGGATTTTGGGTGGCAAACCAGGTGC 1251
Query 1331 ATCAACTTACATAGTTGGAGTTCAAGAAGACAAAGGTTTCTACCTTGATCCGCATGATGT 1390
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 1252 CTCAACTTACATAGTTGGTGTTCAAGAAGACAAAGGTTTCTACCTTGATCCGCATGAAGT 1311
Query 1391 TCAACAGGTAGTGACAGTCAAGAAAGAAA-ATCAAGATGTTGACACATCGTCTTACCATT 1449
||||||||| || |||||||| || |||| | || |||||||||||||| || || ||||
Sbjct 1312 TCAACAGGTGGTCACAGTCAACAAGGAAACACCA-GATGTTGACACATCCTCCTATCATT 1370
Query 1450 GCAATACCCTCCGTTATGTTCCGCTTG-AGTCACTCGACCCGTCACTAGCTCTTGGATTC 1508
||||| ||| ||||||||||| ||| | ||||||||||| || |||||||| ||||||
Sbjct 1371 GCAATGTCCTTCGTTATGTTCCT-TTGGAATCACTCGACCCATCTCTAGCTCTAGGATTC 1429
Query 1509 TATTGCCAG-GACAAAGATGATTTCGATGATTTCTGTATCCGAGCAACGAAGCTAGCGGG 1567
||||||| | ||||||||||||||||| ||||||||| |||||||| ||| ||||| |
Sbjct 1430 TATTGCC-GCGACAAAGATGATTTCGACGATTTCTGTCTCCGAGCATTGAAACTAGCTGA 1488
Query 1568 GGACTCTAATGGCGCTCC-TCTCTTTACTGTGACTCAATCTCACA 1611
||| || || || ||||| | | || || ||||||||| | ||||
Sbjct 1489 GGAATCAAACGGTGCTCCAT-TGTTCACAGTGACTCAAACCCACA 1532
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 88152157020
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5